RPSBLAST alignment of GI: 254780712 and protein with PDBid: 1jgq
>1jgq_S 30S ribosomal protein S16; ribosome assembly, protein synthesis, LIFE; HET: 2MG H2U M2G OMC OMG YG PSU 5MC 7MG 5MU 1MA 4SU; 5.00A {Thermus thermophilus} SCOP: i.1.1.1 PDB: 1jgo_S* 1jgp_S* 1gix_S* 1ml5_S* 1emw_A 1fjg_P* 1hnw_P* 1hnx_P* 1hnz_P* 1hr0_P 1i94_P* 1i95_P* 1i96_P* 1i97_P* 1ibk_P* 1ibl_P* 1ibm_P 1j5e_P 1n32_P* 1n33_P* ... Length = 91
Score = 105 bits (265), Expect = 2e-24
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 5/90 (5%)
Query: 3 LKIRLACGGSKSRH---HYRIVVANSRSPRDGKFIEKLGTWNPTLPKENPLRFTMNFERI 59
+KIRLA GSK HYRIVV ++R RDGK+IEK+G ++P K P ++ ER
Sbjct: 2 VKIRLARFGSKHNPHYPHYRIVVTDARRKRDGKYIEKIGYYDP--RKTTPDWLKVDVERA 59
Query: 60 QHWMSKGAQPTDRILFFLDKAGLIKRSPQN 89
++W+S GAQPTD L +AG+ ++ +
Sbjct: 60 RYWLSVGAQPTDTARRLLRQAGVFRQEARE 89