HHSEARCH alignment of GI: 254780713 and SCOP domain: d1eysh1

Alignment
>d1eysh1 b.41.1.1 (H:59-259) Photosynthetic reaction centre {Thermochromatium tepidum [TaxId: 1050]}
Probab=96.98  E-value=0.00083  Score=38.75  Aligned_cols=90  Identities=21%  Similarity=0.256  Sum_probs=60.4

Q ss_pred             CCEEEECHHHCCCCCC----------CCCCCCH----HHHHCCEEEEECCCEEEEEEEEE-ECCCC--EEEEEECCC-CC
Q ss_conf             9687741777886556----------4100214----52401136752584311998866-57995--089997499-82
Q gi|254780713|r   78 DLKLYAKRQDFKDEEL----------EEDEFFN----TDLEEMETFDRQGKYWGQVCGVY-NFGAG--SILEIKNTM-EK  139 (190)
Q Consensus        78 g~~i~i~~~~lp~~~l----------~~~e~Y~----~dLiG~~V~d~~~~~iG~V~~v~-~~~a~--dil~V~~~~-~k  139 (190)
                      |---|.+|.+.|+...          ....|.+    .|++|+.|++.+|+.+|+|.+++ +...+  -.++|.+.. ++
T Consensus        54 Gp~~wa~R~d~P~l~~~g~~~i~p~~~~~~~~v~~g~~DprG~~V~~~DG~~vGtV~Dv~vD~~e~~vRYleVdtg~ggk  133 (201)
T d1eysh1          54 GPAASPDRPKHCDLTFEGLPKIVPMRVAKEFSIAEGDPDPRGMTVVGLDGEVAGTVSDVWVDRSEPQIRYLEVEVAANKK  133 (201)
T ss_dssp             GGGCCCCCCSSCCBCSSCSBSSEETTTSTTCEECTTSCCCTTCEEECSSSCEEEEEEEEEEETTTTEEEEEEEEETTTCC
T ss_pred             CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEECCCCCCCCCEEECCCCCEEEEEEEEEEECCCCCEEEEEEEECCCCC
T ss_conf             77556445678655568980587632368726625889854574583899878788889997888928899999558995


Q ss_pred             EEEEECHHHHCCEEECCCCEEEEE-CCCCCCC
Q ss_conf             899875031001056339799995-2810038
Q gi|254780713|r  140 TFLIPFTKFAVLEVNLQENKILID-PIAAGLN  170 (190)
Q Consensus       140 e~lIP~v~~~I~~ID~~~k~I~v~-~p~Glld  170 (190)
                      .+|||+.   ...||...+.+.|+ +-.--+.
T Consensus       134 ~vLvP~~---~a~id~~~~~V~V~altk~q~~  162 (201)
T d1eysh1         134 KVLLPIG---FSRFDKKARKVKVDAIKAAHFA  162 (201)
T ss_dssp             EEEEEGG---GCEEEGGGTEEECSSSCGGGGG
T ss_pred             EEEEEEE---EEEECCCCCEEEEECCCHHHHH
T ss_conf             7997620---0276388888999222789983


SCOP domain information

class: All beta proteins
fold: PRC-barrel domain
superfamily: PRC-barrel domain
family: Photosynthetic reaction centre, H-chain, cytoplasmic domain
domain: Photosynthetic reaction centre
species: Thermochromatium tepidum [TaxId: 1050]