RPSBLAST alignment of GI: 254780713 and protein with PDBid: 3h9n

>3h9n_A Ribosome maturation factor RIMM; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Haemophilus influenzae} Length = 177

 Score = 94.0 bits (233), Expect = 2e-20
 Identities = 35/169 (20%), Positives = 69/169 (40%), Gaps = 12/169 (7%)

Query: 7   LVLMATIGTTHGLNGEVYIDSYANNPIDLNRY----VLYSNDNRELRILKMYRKNKRFIA 62
           + ++  +G+T+G+ G + I S       +  Y    +    + + + +      N   I 
Sbjct: 2   IEVVGKLGSTYGIRGWLRIYSSTEQAESIFDYQPWFLKIKGEWQSIELENWRYHNHEIIV 61

Query: 63  TFSGIDNIHSASELRDLKLYAKRQDFKDEELEEDEFFNTDLEEMETFDRQGKYWGQVCGV 122
              G+D+  +A  L ++++      F   ELEE +++  DL      + +G   G V  +
Sbjct: 62  KLKGVDDREAAQILANVEIGVDLSVFP--ELEEGDYYWHDLIGCTVVNLEGYTMGTVTEM 119

Query: 123 YNFGAGSILEIKNTME-----KTFLIPFTK-FAVLEVNLQENKILIDPI 165
              G+  +L +K   +     +  LIPF     V  V+L    I +D  
Sbjct: 120 METGSNDVLVVKANTKDAFGKQERLIPFLYEQVVKRVDLTTKTIEVDWD 168