HHsearch alignment of GI: 254780714 and MMDB domain: 1ns5_A_
>1ns5_A (A:) Hypothetical protein YBEA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.68A {Escherichia coli}
Probab=95.08 E-value=0.047 Score=34.74 Aligned_cols=111 Identities=14% Similarity=0.160 Sum_probs=77.0
Q ss_pred CCEEEEEECCHHHCCCCCCEEEECCCCCCCCEEEECHHHHHHHHHHHHHCCCCCCCEEEECCCCCEECHHHHHHHH-H--
Q ss_conf 9659999602563589851353113068886177505889999987531147783089987998760489999973-0--
Q gi|254780714|r 31 NLWSMDAIQIRNFSTDRHHSVDDTPAGGGAGMVLRVDILGKAIDHAVSQYTHEDIPRILMSPRGKTLTQKRVRQLS-Q-- 107 (236)
Q Consensus 31 gli~i~~~dlRdfs~~kh~~VDD~PyGGG~GMVlk~epi~~ai~~~~~~~~~~~~~vI~lSP~Gk~l~Q~~a~~ls-~-- 107 (236)
+...++++.+++-...++..++ ....+--+.+.++. ++..+|.|.+.|+.++-....++- +
T Consensus 29 ~~~~~e~~e~~~~~~~~~~~~~--------------~~~~kE~~~il~~~--~~~~~V~LDe~Gk~l~S~efa~~l~~~~ 92 (155)
T 1ns5_A 29 KDXPFELIEIPAGKRGKNADIK--------------RILDKEGEQXLAAA--GKNRIVTLDIPGKPWDTPQLAAELERWK 92 (155)
T ss_dssp TTSCEEEEEECCCCCCTTCCHH--------------HHHHHHHHHHHHHH--TTSEEEEEEEEEECCCHHHHHHHHHHHH
T ss_pred CCCCEEEEEECCCCCCCCCCHH--------------HHHHHHHHHHHHHC--CCCCEEEECCCCCCCCHHHHHHHHHHHH
T ss_conf 7687379994676677622399--------------99999999998618--8884899778997367699999999999
Q ss_pred --CCCEEEEECCCHHHHHHHHHHCCCCCEEEHHEEECCCCHHHHHHHHHHHHHH
Q ss_conf --2875999415011448999740453100334011173277999999999850
Q gi|254780714|r 108 --KLGVIIVCGRFEGIDERIIEARDLEEISVGDYILSGGEPAALILLDAVVRLL 159 (236)
Q Consensus 108 --~~~liliCGrYEGiDeRvid~~~d~eiSiGDyVLsGGEl~a~v~~dai~Rli 159 (236)
..+++|+-|==.|+++.+... ++..+|+|...++ -|++.++++|-+-|-.
T Consensus 93 ~~g~~i~F~IGG~~G~~~~v~~~-a~~~lSls~mTfp-H~larvvL~EQiYRa~ 144 (155)
T 1ns5_A 93 LDGRDVSLLIGGPEGLSPACKAA-AEQSWSLSALTLP-HPLVRVLVAESLYRAW 144 (155)
T ss_dssp HHCSCEEEEECBTTBCCHHHHHH-CSEEECCCSSCCC-HHHHHHHHHHHHHHHH
T ss_pred HCCCCEEEEEECCCCCCHHHHHH-CCCEEECCCCCCC-HHHHHHHHHHHHHHHH
T ss_conf 72997799997787658889974-1907866688870-8999999999999999