HHsearch results for GI: 254780714 and protein with PDBid: 1oy5_A
>1oy5_A TRNA (guanine-N(1)-)-methyltransferase; structural genomics, TRMD, tRNA (M1G37) methyltransferase, BSGC structure funded by NIH; 2.60A {Aquifex aeolicus} SCOP: c.116.1.4
Probab=100.00 E-value=0 Score=741.27 Aligned_cols=228 Identities=38% Similarity=0.620 Sum_probs=217.3
Q ss_pred CEEEEEEEECHHHHHHHHCCCHHHHHHHCCCEEEEEECCHHHCCCCCCEEEECCCCCCCCEEEECHHHHHHHHHHHHHCC
Q ss_conf 54589985183564456403367999974965999960256358985135311306888617750588999998753114
Q gi|254780714|r 2 TFHASILTLYPEMFPGHLEKSVAGKALACNLWSMDAIQIRNFSTDRHHSVDDTPAGGGAGMVLRVDILGKAIDHAVSQYT 81 (236)
Q Consensus 2 ~Mki~IITlFPe~f~~~l~~sIigkA~~~gli~i~~~dlRdfs~~kh~~VDD~PyGGG~GMVlk~epi~~ai~~~~~~~~ 81 (236)
.|+|+|||||||||++++++||+|||+++|+|+++++|||||+.+ ++|||+||||||||||||||+++|+++++++
T Consensus 5 ~Mk~~IiTLFPe~f~~~l~~sIigrA~~~gl~~i~~~nlRdf~~~--k~VDD~PyGGGpGMVm~~epl~~ai~~~~~~-- 80 (257)
T 1oy5_A 5 PLRFFVLTIFPHIISCYSEYGIVKQAIKKGKVEVYPIDLREFAPK--GQVDDVPYGGLPGMVLKPEPIYEAYDYVVEN-- 80 (257)
T ss_dssp CEEEEEEESCHHHHHHHTTSHHHHHHHHHTSEEEEEEEGGGGCTT--SCCEECBSSCCSSCEECHHHHHHHHHHHHHH--
T ss_pred CEEEEEEEECHHHHHHHHHCCHHHHHHHCCCEEEEEECHHHHCCC--CCCCCCCCCCCCCEEEEEHHHHHHHHHHHHC--
T ss_conf 848999998856522032244899999869748998641673679--9867785589995088506999999998750--
Q ss_pred CCCCCEEEECCCCCEECHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCEEEHHEEECCCCHHHHHHHHHHHHHHCC
Q ss_conf 77830899879987604899999730287599941501144899974045310033401117327799999999985057
Q gi|254780714|r 82 HEDIPRILMSPRGKTLTQKRVRQLSQKLGVIIVCGRFEGIDERIIEARDLEEISVGDYILSGGEPAALILLDAVVRLLPG 161 (236)
Q Consensus 82 ~~~~~vI~lSP~Gk~l~Q~~a~~ls~~~~liliCGrYEGiDeRvid~~~d~eiSiGDyVLsGGEl~a~v~~dai~RlipG 161 (236)
..++++||+||||++|||+.|++||+.++|+|||||||||||||.+ ++|+|||||||||||||+||||++||++||+||
T Consensus 81 ~~~~~vI~lSP~G~~~~Q~~a~eLs~~~~liliCGRYEGiDeRi~~-~~d~EiSiGDyVLsGGEl~A~viiDav~RliPG 159 (257)
T 1oy5_A 81 YGKPFVLITEPWGEKLNQKLVNELSKKERIMIICGRYEGVDERVKK-IVDMEISLGDFILSGGEIVALAVIDAVSRVLPG 159 (257)
T ss_dssp HCCCEEEEECTTBCCCCHHHHHHHHTCSEEEEEECBTTCBCGGGGG-GCCEECCBCSSCCSBSHHHHHHHHHHHHHTSTT
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH-CCCEEEEECCEEEECCCHHHHHHHHHHHHHCCC
T ss_conf 6997499727531012378778762599779996462148788752-687388641689708608999999999985788
Q ss_pred CCCCCCCCCCCCHHCCCCCCCCCCCHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCC
Q ss_conf 46782223344011488462111672540898898434189989999999999999998768626863056346
Q gi|254780714|r 162 VLGNQQSTIHESFENGLLEFPQYTRPQIWEGLAIPPILNSGDHERIKKWRKEQSFALTKKHRPDLLSKKGTLNT 235 (236)
Q Consensus 162 vlg~~~S~~~eSf~~~lLe~P~YTrP~~~~g~~VP~VLlSGnH~~I~~Wr~~~s~~~T~~~RPDL~~~~~~~~~ 235 (236)
||||++|+.+|||++|||||||||||++|+|++||+|||||||++|++||+++|+++|+++|||||++. ++++
T Consensus 160 vlg~~~S~~~eSF~~glLe~P~YTRP~~~~g~~VPeVLlSGnH~~I~~WR~~~sl~~T~~~RPDLl~k~-l~~~ 232 (257)
T 1oy5_A 160 VLSEPQSIQEDSFQNRWLGYPVYTRPREYRGMKVPEELLSGHHKLIELWKLWHRIENTVKKRPDLIPKD-LTEL 232 (257)
T ss_dssp TSSCC--------------CCCCBSCSEETTEECCGGGTSCSSSTTTHHHHHHHTTTGGGSCSSCSTTG-GGTT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHH-CCHH
T ss_conf 548976553033448988898769957049998984331798799999999999999987694777621-6999