HHsearch results for GI: 254780714 and protein with PDBid: 3ief_A

>3ief_A TRNA (guanine-N(1)-)-methyltransferase; niaid, ssgcid, seattle structural genomics center for infectious diseases; 2.50A {Bartonella henselae}
Probab=100.00  E-value=0  Score=761.47  Aligned_cols=231  Identities=61%  Similarity=1.061  Sum_probs=224.4

Q ss_pred             CCEEEEEEEECHHHHHHHHCCCHHHHHHHCCCEEEEEECCHHHCCCCCCEEEECCCCCCCCEEEECHHHHHHHHHHHHHC
Q ss_conf             95458998518356445640336799997496599996025635898513531130688861775058899999875311
Q gi|254780714|r    1 MTFHASILTLYPEMFPGHLEKSVAGKALACNLWSMDAIQIRNFSTDRHHSVDDTPAGGGAGMVLRVDILGKAIDHAVSQY   80 (236)
Q Consensus         1 M~Mki~IITlFPe~f~~~l~~sIigkA~~~gli~i~~~dlRdfs~~kh~~VDD~PyGGG~GMVlk~epi~~ai~~~~~~~   80 (236)
                      |.|+|+|||||||||++++++||+|||+++|+|+++++|||||+.|||++|||+||||||||||||||+.+|++++++  
T Consensus         2 M~f~i~IiTlFPe~f~~~l~~siigrA~~~g~~~i~~~nlRdf~~~kh~~VDD~PyGGG~GMVm~~epl~~ai~~~~~--   79 (233)
T 3ief_A            2 MKFQARVLTLYPEMFPGFLGCSLAGQALKQGIWSLETVQIRDFALDKHHSVDDTPAGGGAGMVMRADVLAAALDSCPN--   79 (233)
T ss_dssp             -CEEEEEEESCGGGSSGGGGSHHHHHHHHTTSEEEEEEEGGGGC-----CCEECCTTCCSSCEECHHHHHHHHTTSCC--
T ss_pred             CCCCCEEEEECHHHHHHHHHCCHHHHHHHCCCEEEEEECHHHHCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHC--
T ss_conf             842141889883641304335589999876966999878254078989862561468999838736899999998651--


Q ss_pred             CCCCCCEEEECCCCCEECHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCEEEHHEEECCCCHHHHHHHHHHHHHHC
Q ss_conf             47783089987998760489999973028759994150114489997404531003340111732779999999998505
Q gi|254780714|r   81 THEDIPRILMSPRGKTLTQKRVRQLSQKLGVIIVCGRFEGIDERIIEARDLEEISVGDYILSGGEPAALILLDAVVRLLP  160 (236)
Q Consensus        81 ~~~~~~vI~lSP~Gk~l~Q~~a~~ls~~~~liliCGrYEGiDeRvid~~~d~eiSiGDyVLsGGEl~a~v~~dai~Rlip  160 (236)
                         +.++|||||||++|||++|++||++++|+|||||||||||||+|+++|+|||||||||||||+||||++||++||+|
T Consensus        80 ---~~~vI~lSP~Gk~~~Q~~a~~ls~~~~liliCGrYEGiDeRv~~~~~~~eiSiGDyVLsGGEl~A~viiDav~Rllp  156 (233)
T 3ief_A           80 ---DSPRLLMSPRGRLLNQAYARSLARSSGVTLVCGRFEGVDERIIEARELEEVSIGDYILSGGETAALVLLDAIVRLLP  156 (233)
T ss_dssp             ---CSCEEEEEEEEEECCHHHHHHHTTSSEEEEEECCSSCBBHHHHHHTTCEEEESSSSCCSCHHHHHHHHHHHHHTTST
T ss_pred             ---CCCEEEECCCCCEECHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCEEEEECCEEEECCCHHHHHHHHHHHHHCC
T ss_conf             ---79889988997681167769873699779996351444089998636468760378971750999999999998587


Q ss_pred             CCCCCCCCCCCCCHHCCCCCCCCCCCHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCC
Q ss_conf             7467822233440114884621116725408988984341899899999999999999987686268630563469
Q gi|254780714|r  161 GVLGNQQSTIHESFENGLLEFPQYTRPQIWEGLAIPPILNSGDHERIKKWRKEQSFALTKKHRPDLLSKKGTLNTQ  236 (236)
Q Consensus       161 Gvlg~~~S~~~eSf~~~lLe~P~YTrP~~~~g~~VP~VLlSGnH~~I~~Wr~~~s~~~T~~~RPDL~~~~~~~~~e  236 (236)
                      |||||++|+.+|||+||||||||||||++|+|++||+|||||||++|++||++||+++|+++|||||++..++++|
T Consensus       157 Gvlgn~~S~~~eSF~~~lLe~P~YTrP~~~~g~~VP~VLlSGnH~~I~~Wr~~~s~~~T~~~RPDL~~~~~~~~~~  232 (233)
T 3ief_A          157 GVMGNEISAKCESFENGLLEHPQYTRPAVFEGRGIPPVLTSGHHKAIANWRQQQAESLTRQRRPDLYALYNKNRQK  232 (233)
T ss_dssp             TSSSGGGCCSSCGGGGTCCCCCBCCSSSEETTEECCGGGGSSCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHTC-
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC
T ss_conf             8668811200110027998998568855257998895014898799999999999999987798999998652006