HHsearch results for GI: 254780714 and protein with PDBid: 3ief_A
>3ief_A TRNA (guanine-N(1)-)-methyltransferase; niaid, ssgcid, seattle structural genomics center for infectious diseases; 2.50A {Bartonella henselae}
Probab=100.00 E-value=0 Score=761.47 Aligned_cols=231 Identities=61% Similarity=1.061 Sum_probs=224.4
Q ss_pred CCEEEEEEEECHHHHHHHHCCCHHHHHHHCCCEEEEEECCHHHCCCCCCEEEECCCCCCCCEEEECHHHHHHHHHHHHHC
Q ss_conf 95458998518356445640336799997496599996025635898513531130688861775058899999875311
Q gi|254780714|r 1 MTFHASILTLYPEMFPGHLEKSVAGKALACNLWSMDAIQIRNFSTDRHHSVDDTPAGGGAGMVLRVDILGKAIDHAVSQY 80 (236)
Q Consensus 1 M~Mki~IITlFPe~f~~~l~~sIigkA~~~gli~i~~~dlRdfs~~kh~~VDD~PyGGG~GMVlk~epi~~ai~~~~~~~ 80 (236)
|.|+|+|||||||||++++++||+|||+++|+|+++++|||||+.|||++|||+||||||||||||||+.+|++++++
T Consensus 2 M~f~i~IiTlFPe~f~~~l~~siigrA~~~g~~~i~~~nlRdf~~~kh~~VDD~PyGGG~GMVm~~epl~~ai~~~~~-- 79 (233)
T 3ief_A 2 MKFQARVLTLYPEMFPGFLGCSLAGQALKQGIWSLETVQIRDFALDKHHSVDDTPAGGGAGMVMRADVLAAALDSCPN-- 79 (233)
T ss_dssp -CEEEEEEESCGGGSSGGGGSHHHHHHHHTTSEEEEEEEGGGGC-----CCEECCTTCCSSCEECHHHHHHHHTTSCC--
T ss_pred CCCCCEEEEECHHHHHHHHHCCHHHHHHHCCCEEEEEECHHHHCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHC--
T ss_conf 842141889883641304335589999876966999878254078989862561468999838736899999998651--
Q ss_pred CCCCCCEEEECCCCCEECHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCEEEHHEEECCCCHHHHHHHHHHHHHHC
Q ss_conf 47783089987998760489999973028759994150114489997404531003340111732779999999998505
Q gi|254780714|r 81 THEDIPRILMSPRGKTLTQKRVRQLSQKLGVIIVCGRFEGIDERIIEARDLEEISVGDYILSGGEPAALILLDAVVRLLP 160 (236)
Q Consensus 81 ~~~~~~vI~lSP~Gk~l~Q~~a~~ls~~~~liliCGrYEGiDeRvid~~~d~eiSiGDyVLsGGEl~a~v~~dai~Rlip 160 (236)
+.++|||||||++|||++|++||++++|+|||||||||||||+|+++|+|||||||||||||+||||++||++||+|
T Consensus 80 ---~~~vI~lSP~Gk~~~Q~~a~~ls~~~~liliCGrYEGiDeRv~~~~~~~eiSiGDyVLsGGEl~A~viiDav~Rllp 156 (233)
T 3ief_A 80 ---DSPRLLMSPRGRLLNQAYARSLARSSGVTLVCGRFEGVDERIIEARELEEVSIGDYILSGGETAALVLLDAIVRLLP 156 (233)
T ss_dssp ---CSCEEEEEEEEEECCHHHHHHHTTSSEEEEEECCSSCBBHHHHHHTTCEEEESSSSCCSCHHHHHHHHHHHHHTTST
T ss_pred ---CCCEEEECCCCCEECHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCEEEEECCEEEECCCHHHHHHHHHHHHHCC
T ss_conf ---79889988997681167769873699779996351444089998636468760378971750999999999998587
Q ss_pred CCCCCCCCCCCCCHHCCCCCCCCCCCHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCC
Q ss_conf 7467822233440114884621116725408988984341899899999999999999987686268630563469
Q gi|254780714|r 161 GVLGNQQSTIHESFENGLLEFPQYTRPQIWEGLAIPPILNSGDHERIKKWRKEQSFALTKKHRPDLLSKKGTLNTQ 236 (236)
Q Consensus 161 Gvlg~~~S~~~eSf~~~lLe~P~YTrP~~~~g~~VP~VLlSGnH~~I~~Wr~~~s~~~T~~~RPDL~~~~~~~~~e 236 (236)
|||||++|+.+|||+||||||||||||++|+|++||+|||||||++|++||++||+++|+++|||||++..++++|
T Consensus 157 Gvlgn~~S~~~eSF~~~lLe~P~YTrP~~~~g~~VP~VLlSGnH~~I~~Wr~~~s~~~T~~~RPDL~~~~~~~~~~ 232 (233)
T 3ief_A 157 GVMGNEISAKCESFENGLLEHPQYTRPAVFEGRGIPPVLTSGHHKAIANWRQQQAESLTRQRRPDLYALYNKNRQK 232 (233)
T ss_dssp TSSSGGGCCSSCGGGGTCCCCCBCCSSSEETTEECCGGGGSSCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHTC-
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC
T ss_conf 8668811200110027998998568855257998895014898799999999999999987798999998652006