HHSEARCH alignment of GI: 254780715 and SCOP domain: d2zjrm1

Alignment

Probab=100.00  E-value=1.1e-40  Score=274.56  Aligned_cols=100  Identities=50%  Similarity=0.962  Sum_probs=94.2

Q ss_pred             CCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCEEEEEC
Q ss_conf             93589997999999760279897378998999999835887740123453543136666433886300356130289991
Q gi|254780715|r    1 MNIIDELDHEEMVRIESKRSLPKFSPGDTLCVKTIITEGDKSRIQAYEGVCIARSGRGINKNFTVRKISYGEGMNRLFPL   80 (141)
Q Consensus         1 Mnli~~le~~~~~~~~~k~~~P~f~~GD~v~V~~~i~eg~k~R~Q~F~GvvI~~~~~G~~stftvRki~~g~GVE~~fpl   80 (141)
                      |++|+.+|+++      .+++|+|+|||||+|+++|.||+|+|+|.|+|+||+++++|+++||||||+++|+|||++|||
T Consensus         9 ~~li~~ie~~~------~k~iP~f~~GDtV~V~~~i~Eg~k~RiQ~FeGvvI~~~~~g~~~tftvRki~~g~GVEr~fpl   82 (108)
T d2zjrm1           9 GELLRGIEQDH------TRQLPDFRPGDTVRVDTKVREGNRTRSQAFEGVVIAINGSGSRKSFTVRKISFGEGVERVFPF   82 (108)
T ss_dssp             HHHHHHTTGGG------CCCCCCCSSSEEEEEECCTTSSSCCCCEEEECCEEECCCCGGGCEEEEEEEETTEEEEEEEET
T ss_pred             HHHHHHHHHHH------CCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEEEEECCCCCCEEEEEEEECCCCEEEEEEC
T ss_conf             99999999985------767998489989999999758986505788899999827886305998997368428999975


Q ss_pred             CCCCEEEEEEEECCHHHHHHHHHHCC
Q ss_conf             07861012220002046787687508
Q gi|254780715|r   81 YSPMIQDITVIRRGKVRRSKLYYLQD  106 (141)
Q Consensus        81 ~SP~i~~Iev~r~gkvRrakLyYLR~  106 (141)
                      |||+|++|||+++|||||||||||||
T Consensus        83 ~SP~i~~IeV~r~~kvRRakLyYLRd  108 (108)
T d2zjrm1          83 ASPLVNQVTIVERGKVRRAKLYYLRE  108 (108)
T ss_dssp             TCTTEEEEEEEECCCCSSSCCGGGCC
T ss_pred             CCCCCCEEEEEEECCEEEEEEEEECC
T ss_conf             89975679999814340001402149

SCOP domain information

class: All beta proteins
fold: SH3-like barrel
superfamily: Translation proteins SH3-like domain
family: Ribosomal protein L19
domain: Ribosomal protein L19
species: Deinococcus radiodurans [TaxId: 1299]