HHsearch alignment for GI: 254780716 and conserved domain: COG0169
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism].
Probab=96.60 E-value=0.0096 Score=39.77 Aligned_cols=114 Identities=16% Similarity=0.179 Sum_probs=65.7
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 805698157111688999997898-5999739989999999712211278403289899986057788999976990699
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGF-RLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~-~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
T Consensus 127 ~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~-~~~~~~~~~-~~~~dliINaTp~Gm~~ 204 (283)
T COG0169 127 KRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVE-AAALADLEG-LEEADLLINATPVGMAG 204 (283)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCC-CCCCCCCCC-CCCCCEEEECCCCCCCC
T ss_conf 8899989768999999999986998799995888999999998645056311-024554123-55457899788787778
Q ss_pred HH---HHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 99---999997207899899967986578999999999847994
Q gi|254780716|r 83 DQ---LIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIY 123 (475)
Q Consensus 83 ~~---vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~ 123 (475)
T Consensus 205 ~~~~~~~~--~~~l~~~~~v~D~vY~-P~~T-plL~~A~~~G~~ 244 (283)
T COG0169 205 PEGDSPVP--AELLPKGAIVYDVVYN-PLET-PLLREARAQGAK 244 (283)
T ss_pred CCCCCCCC--HHHCCCCCEEEEECCC-CCCC-HHHHHHHHCCCC
T ss_conf 87888886--7766867789981118-8788-899999985990