HHsearch alignment for GI: 254780716 and conserved domain: COG0771
>COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane].
Probab=96.95 E-value=0.013 Score=38.72 Aligned_cols=126 Identities=16% Similarity=0.150 Sum_probs=72.5
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEEC-CCHHHHHHHCCCCCEEEEE--CCC-H
Q ss_conf 80569815711168899999789859997399899999997122112784032-8989998605778899997--699-0
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVT-KNLEQMVEAVCKPRKILMM--VTD-G 79 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~-~s~~e~v~~l~~pr~Iil~--vp~-g 79 (475)
T Consensus 8 ~kv~V~GLG~sG~a~a~~L~~~G~~v~v~D~~~~~-~~~~~~-~~~~~~i~~~~g~~~~--~~~~~~d~vV~SPGi~~~~ 83 (448)
T COG0771 8 KKVLVLGLGKSGLAAARFLLKLGAEVTVSDDRPAP-EGLAAQ-PLLLEGIEVELGSHDD--EDLAEFDLVVKSPGIPPTH 83 (448)
T ss_pred CEEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCC-CCHHHH-HHHCCCCEEECCCCCH--HCCCCCCEEEECCCCCCCC
T ss_conf 97999926651099999999779869998389876-532344-4420372231376411--0013477899899999988
Q ss_pred HHHHHHHH---------HHHHCC--CCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCC
Q ss_conf 69999999---------997207--8998999679865789999999998479943067546760
Q gi|254780716|r 80 DPVDQLID---------KLKPLL--SPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGV 133 (475)
Q Consensus 80 ~~v~~vi~---------~l~~~l--~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~ 133 (475)
T Consensus 84 p~v~~A~~~gi~i~~dieL~~r~~~~~p~vaITGTNGKTTTTsli~~~l~~~G~~~~lgGNIG~p 148 (448)
T COG0771 84 PLVEAAKAAGIEIIGDIELFYRLSGEAPIVAITGTNGKTTTTSLIAHLLKAAGLDALLGGNIGTP 148 (448)
T ss_pred HHHHHHHHCCCCEEEHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEECCCCCCC
T ss_conf 89999998699377488889874489998999799962889999999998559983213516713