HHsearch alignment for GI: 254780716 and conserved domain: PRK00683

>PRK00683 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=96.95  E-value=0.022  Score=37.18  Aligned_cols=122  Identities=16%  Similarity=0.205  Sum_probs=69.3

Q ss_pred             CCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEE--CCC
Q ss_conf             998805698157111688999997898599973998999999971221127840328989998605778899997--699
Q gi|254780716|r    1 MKQADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMM--VTD   78 (475)
Q Consensus         1 M~k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~--vp~   78 (475)
T Consensus         1 ~~~KkvlV~GlG~SG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~~~------~~~~~~~~~~~~---~d~vv~SPGi~~   71 (418)
T PRK00683          1 MGLQRVVVLGLGVTGKSVARFLAQKGVYVIGVDNSLEALQSCPYIHE------RYLEGAEEFPEQ---VDLVVRSPGIKP   71 (418)
T ss_pred             CCCCEEEEEEECHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCHHHH------HCCCCHHHCCCC---CCEEEECCCCCC
T ss_conf             99866999808887999999999782989998298145454614555------405623324234---989998998599


Q ss_pred             HHH-HHHHHH-------H--HH---HCCCCCC-EEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCC
Q ss_conf             069-999999-------9--97---2078998-9996798657899999999984799430675467
Q gi|254780716|r   79 GDP-VDQLID-------K--LK---PLLSPED-ILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSG  131 (475)
Q Consensus        79 g~~-v~~vi~-------~--l~---~~l~~g~-iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSG  131 (475)
T Consensus        72 ~~p~~~~a~~~~i~i~seiel~~~~~~~~~~~~IaITGTNGKTTTt~ll~~iL~~~g~~~~~~GNIG  138 (418)
T PRK00683         72 YHPWVEAAVALKIPVVTDIQLAFQTPEFQRYPSLGITGSTGKTTTILFLEHLLRTLGIPAFAMGNIG  138 (418)
T ss_pred             CCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHHHHCCCCCEEEECCC
T ss_conf             8899999998699754079999742441479879997689866099999999986799818880346