HHsearch alignment for GI: 254780716 and conserved domain: PRK01368

Probab=90.57  E-value=1.4  Score=23.76  Aligned_cols=121  Identities=23%  Similarity=0.277  Sum_probs=61.1

Q ss_pred             CCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEE--CCCHH
Q ss_conf             8805698157111688999997898599973998999999971221127840328989998605778899997--69906
Q gi|254780716|r    3 QADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMM--VTDGD   80 (475)
Q Consensus         3 k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~--vp~g~   80 (475)
T Consensus         6 ~K~v~V~GlG~sG~a~~~~L~~~~-~~~~~dd~~~~~~~~~~~~~~--~~~~~~~~~-~----~~~~d~iV~SPGI~~~~   77 (450)
T PRK01368          6 KQKIGVFGLGKTGISVYEELQNKY-DLIVYDDLKANRDIFEELFSK--NAIIALSDS-R----WQNLDKIVLSPGIPLTH   77 (450)
T ss_pred             CCEEEEEEECHHHHHHHHHHHHCC-CEEEEECCCCCHHHHHHHHCC--CCEECCCCC-C----HHCCCEEEECCCCCCCC
T ss_conf             990899958787999999997199-989998996564789975214--836025711-1----52199999899619989


Q ss_pred             H-HHHHHH---------HHHHCCCCC-C-EEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCC
Q ss_conf             9-999999---------997207899-8-9996798657899999999984799430675467
Q gi|254780716|r   81 P-VDQLID---------KLKPLLSPE-D-ILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSG  131 (475)
Q Consensus        81 ~-v~~vi~---------~l~~~l~~g-~-iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSG  131 (475)
T Consensus        78 p~~~~a~~~~i~i~~eiel~~~~~~~~~~IaITGTnGKTTTt~li~~iL~~~g~~~~~~GNIG  140 (450)
T PRK01368         78 EIVKIAKNFNIPITSDIDLLFEKSKNLKFIAITGTNGKSTTTALISHILNSNGLDYPVAGNIG  140 (450)
T ss_pred             HHHHHHHHCCCCEEEHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCC
T ss_conf             999999987995876999999766799779996899974899999999997599628962556