HHsearch alignment for GI: 254780716 and conserved domain: PRK02705
>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=96.08 E-value=0.15 Score=31.02 Aligned_cols=116 Identities=16% Similarity=0.187 Sum_probs=65.6
Q ss_pred EEEECCHHHHHHHHHHHHCCCEEEEEECCHH-----HHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEE--CCCH
Q ss_conf 6981571116889999978985999739989-----99999971221127840328989998605778899997--6990
Q gi|254780716|r 7 GIIGLGSMGSNLSLNILDKGFRLAVYNKDFE-----LTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMM--VTDG 79 (475)
Q Consensus 7 GiIGLG~MG~~mA~nL~~~G~~V~vydr~~~-----~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~--vp~g 79 (475)
T Consensus 4 ~V~GlG~sG~s~a~~L~~~G~~v~~~D~~~~~~~~~~~~~L~~~gi~~~~g--~~~~~~~~~~~~~~~d~vV~SPGI~~~ 81 (459)
T PRK02705 4 HVIGLGRSGIAAARLLKAQGWEVVVSERNDSPELLERQQELEQEGITVELG--KPLELESFQPWLDQPDLVVVSPGIPWD 81 (459)
T ss_pred EEEEECHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEC--CCCCCCCHHHHCCCCCEEEECCCCCCC
T ss_conf 999548999999999997899599998989923478999998759869816--766643013311678889989964998
Q ss_pred H-HHHHHHH---------HHH-HCCCCCCEE-EECCCCCHHHHHHHHHHHHHCCCCE
Q ss_conf 6-9999999---------997-207899899-9679865789999999998479943
Q gi|254780716|r 80 D-PVDQLID---------KLK-PLLSPEDIL-LDGGNSHFCDTQIRSLQLSEKGIYF 124 (475)
Q Consensus 80 ~-~v~~vi~---------~l~-~~l~~g~ii-ID~sts~~~~t~~~~~~l~~kgi~f 124 (475)
T Consensus 82 ~p~~~~a~~~gi~i~~eiel~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~~g~~~ 138 (459)
T PRK02705 82 HPTLVELREKGIEVIGEMELAWRALKHIPWVGITGTNGKTTVTHLLAHILQAAGLNA 138 (459)
T ss_pred CHHHHHHHHCCCCEECHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCC
T ss_conf 999999998799721499999998504975777178972789999999999839985