HHsearch alignment for GI: 254780716 and conserved domain: PRK05479
>PRK05479 ketol-acid reductoisomerase; Provisional.
Probab=98.00 E-value=8.5e-05 Score=54.91 Aligned_cols=181 Identities=17% Similarity=0.190 Sum_probs=102.3
Q ss_pred CCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 88056981571116889999978985999739989999999712211278403289899986057788999976990699
Q gi|254780716|r 3 QADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 3 k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
T Consensus 17 ~k~iaViGYGsQG~AhAlNLrDSG~~V~vglr~gs~S~~kA~~-----dGf-~v~~~~eA~~~a---Dii~~L~PD~-~q 86 (336)
T PRK05479 17 GKKVAIIGYGSQGHAHALNLRDSGVDVVVGLREGSKSWKKAEA-----DGF-EVLTVAEAAKWA---DVIMILLPDE-LQ 86 (336)
T ss_pred CCEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHH-----CCC-EECCHHHHHHHC---CEEEEECCHH-HH
T ss_conf 9979997527076898855374499779997999803999998-----799-436799999746---8665428757-78
Q ss_pred HHHH-HHHHHCCCCCCEEEEC--CCCCHHHHHHHHHHHHHCCCC-EECCCCCCCCC-C----CCCC-CEEE-EE--CCHH
Q ss_conf 9999-9997207899899967--986578999999999847994-30675467600-0----3568-4378-84--5489
Q gi|254780716|r 83 DQLI-DKLKPLLSPEDILLDG--GNSHFCDTQIRSLQLSEKGIY-FIGIGVSGGVK-G----ARSG-ASLM-VG--GNEK 149 (475)
Q Consensus 83 ~~vi-~~l~~~l~~g~iiID~--sts~~~~t~~~~~~l~~kgi~-fid~pVSGG~~-g----A~~G-~slM-vG--G~~~ 149 (475)
T Consensus 87 ~~vy~~~I~p~lk~G~~L~FaHGFnIhy~~------I~pp~~vDVimVAPKgpG~~VR~~y~~G~GvP~liAV~qD~sG~ 160 (336)
T PRK05479 87 AEVYKEEIEPNLKEGAALAFAHGFNIHFGQ------IVPPADVDVIMVAPKGPGHLVRREYVEGGGVPCLIAVHQDASGN 160 (336)
T ss_pred HHHHHHHHHHHCCCCCEEEEECCCHHCCCE------EEECCCCCEEEECCCCCCHHHHHHHHCCCCEEEEEEEEECCCHH
T ss_conf 999999998545899768861443000560------44458976799888999768999986389804899998688735
Q ss_pred HHHHHHHHHHHHHCCCCCCCEEE-----------EECCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHCCCCHH
Q ss_conf 99888999998750156786189-----------856987467898877678-788899989999999964289978
Q gi|254780716|r 150 AYNRVENILLSISAKYQNSPCCA-----------LLGPDGSGHFVKMIHNGI-EYANMQLIADIYGILRDSLNKNPL 214 (475)
Q Consensus 150 ~~~~~~piL~~iaak~~~~~cv~-----------y~G~~GsGh~vKMVhNgI-ey~~mq~iaE~~~~l~~~~~~~~~ 214 (475)
T Consensus 161 A~~~alaya~~iG~~r---aGvieTTF~eEtetDLfGE-----------Q~VLcGG~~~Li~agFetLvea-Gy~PE 222 (336)
T PRK05479 161 AKDLALAYAKGIGGTR---AGVIETTFKEETETDLFGE-----------QAVLCGGLTELIKAGFETLVEA-GYQPE 222 (336)
T ss_pred HHHHHHHHHHHCCCCC---CCEEECCHHHHHHHHHHHH-----------HHHHHCHHHHHHHHHHHHHHHC-CCCHH
T ss_conf 9999999998738776---6557425599988762445-----------7886243999999999999984-99889