HHsearch alignment for GI: 254780716 and conserved domain: PRK08267

Probab=95.32  E-value=0.2  Score=30.11  Aligned_cols=79  Identities=16%  Similarity=0.255  Sum_probs=51.4

Q ss_pred             EEEEEC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHH
Q ss_conf             569815-7111688999997898599973998999999971221127840328989998605778899997699069999
Q gi|254780716|r    6 IGIIGL-GSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQ   84 (475)
Q Consensus         6 IGiIGL-G~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~   84 (475)
T Consensus         4 vlITGassGIG~a~A~~~a~~G~~V~~~~r~~~~l~~~~~~l~~--~~~~----------------~~~~Dvtd~~~v~~   65 (258)
T PRK08267          4 IFITGAASGIGRATARLFAARGWRVGAYDINEDGLAALAAELGA--ERAW----------------TGALDVTDRAAWDA   65 (258)
T ss_pred             EEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCC--CCEE----------------EEEECCCCHHHHHH
T ss_conf             99907226899999999998799999998889999999998369--9679----------------99911799999999


Q ss_pred             HHHHHHHCC-CCCCEEEEC
Q ss_conf             999997207-899899967
Q gi|254780716|r   85 LIDKLKPLL-SPEDILLDG  102 (475)
Q Consensus        85 vi~~l~~~l-~~g~iiID~  102 (475)
T Consensus        66 ~~~~~~~~~~G~iDiLVNN   84 (258)
T PRK08267         66 ALADFCAATGGRLDVLFNN   84 (258)
T ss_pred             HHHHHHHHHCCCCCEEEEC
T ss_conf             9999999958998689988