HHsearch alignment for GI: 254780716 and conserved domain: PRK08328

Probab=97.05  E-value=0.0026  Score=44.01  Aligned_cols=125  Identities=14%  Similarity=0.230  Sum_probs=75.0

Q ss_pred             CCCEEEEEECCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHCC----CCCCCCEECCCHHHHHHHCCCCCEEEEEC
Q ss_conf             98805698157111688999997898-59997399899999997122----11278403289899986057788999976
Q gi|254780716|r    2 KQADIGIIGLGSMGSNLSLNILDKGF-RLAVYNKDFELTDVFIKKIS----GLSQKVIVTKNLEQMVEAVCKPRKILMMV   76 (475)
Q Consensus         2 ~k~~IGiIGLG~MG~~mA~nL~~~G~-~V~vydr~~~~~~~l~~~~~----~~~~~~~~~~s~~e~v~~l~~pr~Iil~v   76 (475)
T Consensus        26 ~~s~VlvvG~GGlGs~~~~~La~~GvG~i~lvD~D~ve~SNLnRQil~~~~diG~~-~K~~~a~~~l~~iN-p~v~i~~~  103 (230)
T PRK08328         26 KKAKVAVVGVGGLGSPVAYYLAAAGVGTVLLIDEQTPELSNLNRQILHWEEDVGKN-PKPISAKWKLERFN-SDIKIETF  103 (230)
T ss_pred             HCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCEEECCCCHHHHHCCHHHHCCC-CHHHHHHHHHHHHC-CCEEEEHH
T ss_conf             55978998878789999999998489868987487875156325540308774771-03999999999759-95057526


Q ss_pred             CCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCC
Q ss_conf             990699999999972078998999679865789999999998479943067546760
Q gi|254780716|r   77 TDGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGV  133 (475)
Q Consensus        77 p~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~  133 (475)
T Consensus       104 ~~-~i~~---~n~~~ll~~~DlViD~tDn-~~tr~~ln~~c~~~~iPlI~g~v~g~~  155 (230)
T PRK08328        104 VG-RLTE---ENIDEVLKGVDVIVDCLDN-FETRYLLDDYAHKKGIPLVHGAVEGMY  155 (230)
T ss_pred             HH-HHHH---HHHHHHHCCCCEEEECCCC-HHHHHHHHHHHHHCCCCEEEEEEECCE
T ss_conf             64-4237---7798620059899998899-899999999999839977999966179