HHsearch alignment for GI: 254780716 and conserved domain: PRK08936

Probab=94.15  E-value=0.53  Score=26.97  Aligned_cols=82  Identities=16%  Similarity=0.253  Sum_probs=52.9

Q ss_pred             EEEE--ECCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf             5698--1571116889999978985999-739989999999712211278403289899986057788999976990699
Q gi|254780716|r    6 IGII--GLGSMGSNLSLNILDKGFRLAV-YNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV   82 (475)
Q Consensus         6 IGiI--GLG~MG~~mA~nL~~~G~~V~v-ydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v   82 (475)
T Consensus         9 valVTGa~~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~----------------~~~~Dv~~~~~v   72 (261)
T PRK08936          9 VVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDESEANDVAEEIKKVGGEAI----------------AVKGDVTVESDV   72 (261)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEE----------------EEECCCCCHHHH
T ss_conf             8999684778999999999987999999728987899999999996599389----------------998279999999


Q ss_pred             HHHHHHHHHCCCCCCEEEECC
Q ss_conf             999999972078998999679
Q gi|254780716|r   83 DQLIDKLKPLLSPEDILLDGG  103 (475)
Q Consensus        83 ~~vi~~l~~~l~~g~iiID~s  103 (475)
T Consensus        73 ~~~v~~~~~~~G~iDiLVNNA   93 (261)
T PRK08936         73 VNLIQSAVKEFGTLDVMINNA   93 (261)
T ss_pred             HHHHHHHHHHHCCCCEEEECC
T ss_conf             999999999829988999899