HHsearch alignment for GI: 254780716 and conserved domain: TIGR00465
>TIGR00465 ilvC ketol-acid reductoisomerase; InterPro: IPR013023 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine . The enzyme forms a tetramer of similar but non-identical chains, and requires magnesium as a cofactor. ; GO: 0016491 oxidoreductase activity, 0009082 branched chain family amino acid biosynthetic process.
Probab=92.98 E-value=0.46 Score=27.41 Aligned_cols=98 Identities=22% Similarity=0.240 Sum_probs=62.1
Q ss_pred CCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCH
Q ss_conf 880569815711168899999789859997399899---99999712211278403289899986057788999976990
Q gi|254780716|r 3 QADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFEL---TDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDG 79 (475)
Q Consensus 3 k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~---~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g 79 (475)
T Consensus 3 ~~~~~~~g~g~~g~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~---~~~gw~pg~~~~~~~~~~~~~~~~~~l~pd~ 79 (344)
T TIGR00465 3 GKTVAIIGYGSQGHAQGLNLRDSGLNVIVGLRKGGIAEKRASWKKA---EEDGWVPGFKVLTVEEAAKRADLILNLLPDE 79 (344)
T ss_pred CCEEEEEECCCCCCHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHH---HHCCCCCCCHHHHHHHHHCCCCEEEEECCHH
T ss_conf 8617887327532000012111453157740543023455556544---2124556511233454430134544323213
Q ss_pred HHHHHHHHHHHHCCCCCCEEEECC
Q ss_conf 699999999972078998999679
Q gi|254780716|r 80 DPVDQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 80 ~~v~~vi~~l~~~l~~g~iiID~s 103 (475)
T Consensus 80 ~~~~~~~~~~~p~~~~g~~~~~~~ 103 (344)
T TIGR00465 80 VQPEVYEAEIKPLLKEGKTLGFSH 103 (344)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEC
T ss_conf 445666777665552264213202