HHsearch alignment for GI: 254780716 and conserved domain: TIGR00745
>TIGR00745 apbA_panE 2-dehydropantoate 2-reductase; InterPro: IPR003710 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway . Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE . ApbA and PanE are allelic .; GO: 0008677 2-dehydropantoate 2-reductase activity, 0006206 pyrimidine base metabolic process.
Probab=98.30 E-value=0.0002 Score=52.13 Aligned_cols=176 Identities=16% Similarity=0.184 Sum_probs=119.0
Q ss_pred EEEEEECCHHHHHHHHHHHHCC--CEEEEEECCH--HHHHHHHHHC-----CCC------CCCCEECCCHHHHHHHCCCC
Q ss_conf 0569815711168899999789--8599973998--9999999712-----211------27840328989998605778
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKG--FRLAVYNKDF--ELTDVFIKKI-----SGL------SQKVIVTKNLEQMVEAVCKP 69 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G--~~V~vydr~~--~~~~~l~~~~-----~~~------~~~~~~~~s~~e~v~~l~~p 69 (475)
T Consensus 1 ~i~i~G~GA~G~l~ga~L~~~g~~~~V~~~~R~~r~~~~~~~~~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 78 (332)
T TIGR00745 1 KIAIIGAGAVGSLYGARLARAGANHDVTLLARGKRPKQLEALNQEGLRIVSLDGEGVFELKIPVSAATDPETLP--PQKA 78 (332)
T ss_pred CEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCEEEECCCCCCEEEECCCEEECCCCCCC--CCCC
T ss_conf 96899517889999999873189951899988721688999985883897625677503304412204753357--8775
Q ss_pred CEEEEECCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHH--C----CCCEECCCCCCCC-CCCCCCC-E
Q ss_conf 89999769906999999999720789989996798657899999999984--7----9943067546760-0035684-3
Q gi|254780716|r 70 RKILMMVTDGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSE--K----GIYFIGIGVSGGV-KGARSGA-S 141 (475)
Q Consensus 70 r~Iil~vp~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~--k----gi~fid~pVSGG~-~gA~~G~-s 141 (475)
T Consensus 79 D~~~~~~K~~-~~~~~~~~~~~~~~~~~~vl~lqNG-~g~~e~l~~~~~~n~~~~l~G~~~~ga~~~~~g~~~~~~g~G~ 156 (332)
T TIGR00745 79 DLVIITVKAY-QTEEALALLLPLIGPNTVVLLLQNG-LGHEEKLAELLPENRRRVLGGVTTHGAAREEPGLVVHHAGEGA 156 (332)
T ss_pred CEEEEEECCC-CHHHHHHHHHHHCCCCCEEEEEECC-CHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCEEEEEECCCE
T ss_conf 4899970350-0489999998641888279997388-0279999985069977089999988767708840899723633
Q ss_pred EEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 78845489998889999987501567861898569874678988776
Q gi|254780716|r 142 LMVGGNEKAYNRVENILLSISAKYQNSPCCALLGPDGSGHFVKMIHN 188 (475)
Q Consensus 142 lMvGG~~~~~~~~~piL~~iaak~~~~~cv~y~G~~GsGh~vKMVhN 188 (475)
T Consensus 157 ~~~G~~~~~-~~~~~~a~~l~~ag---~~~~~~~d~~~~~W~Kl~~N 199 (332)
T TIGR00745 157 TKIGDYVGE-EAVEALAELLNEAG---IPAELTEDIQAAIWKKLLVN 199 (332)
T ss_pred EEECCCCCH-HHHHHHHHHHHHCC---CCEEECCHHHHHHHHHHHHH
T ss_conf 884577764-57899999973179---85378302899998878645