HHsearch alignment for GI: 254780716 and conserved domain: TIGR00872
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating); InterPro: IPR004849 This family resembles a larger family of bacterial and eukaryotic 6-phosphogluconate dehydrogenases (Gnd) but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain Gnd, and in Aquifex aeolicus. .
Probab=99.48 E-value=5.2e-14 Score=122.81 Aligned_cols=81 Identities=20% Similarity=0.409 Sum_probs=71.4
Q ss_pred HCCCCHHHHHHHHHHCCCCC-CCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf 42899789999998606884-43079999999997405679995200102333658716778988775178885146777
Q gi|254780716|r 208 SLNKNPLEISHLFSKWDTGK-LSSYLIKITAEILSSSDTITGMPIIDVICDKASQKGTGIRSIIEGHKLSSSMTITETAI 286 (475)
Q Consensus 208 ~~~~~~~~i~~vf~~w~~~~-~~syLl~i~~~il~~k~~~~g~~lid~i~d~~~~kgTg~Wt~~~a~~lgvp~p~i~~av 286 (475)
T Consensus 238 qfDfD~~eVArV---w~~GSVIrSwL~dLt~~Af~~~~------dL~~~~G~v~dSGEGrWtv~~a~dlg~p~PVia~sl 308 (341)
T TIGR00872 238 QFDFDLEEVARV---WRRGSVIRSWLLDLTAKAFEESA------DLEEVEGIVEDSGEGRWTVKEAVDLGVPIPVIATSL 308 (341)
T ss_pred CCCCCHHHHHHH---HCCCCEEEHHHHHHHHHHHHCCC------CCCCEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHH
T ss_conf 776874889998---70898641268889999975078------821322367027872789999886278824899999
Q ss_pred HHHHHHHHHHH
Q ss_conf 88877500577
Q gi|254780716|r 287 FARNLSLYRDE 297 (475)
Q Consensus 287 ~aR~~S~~k~~ 297 (475)
T Consensus 309 ~~Rf~Sr~~D~ 319 (341)
T TIGR00872 309 YERFASREKDD 319 (341)
T ss_pred HHHHCCCCCCC
T ss_conf 98740234566