HHsearch alignment for GI: 254780716 and conserved domain: TIGR01829
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase; InterPro: IPR011283 This entry represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of 1.1.1.36 from EC is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. ; GO: 0018454 acetoacetyl-CoA reductase activity, 0042619 poly-hydroxybutyrate biosynthetic process, 0005737 cytoplasm.
Probab=94.85 E-value=0.26 Score=29.20 Aligned_cols=84 Identities=17% Similarity=0.315 Sum_probs=64.1
Q ss_pred ECCHHHHHHHHHHHHCCCEEEE-EEC-CHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHH
Q ss_conf 1571116889999978985999-739-98999999971221127840328989998605778899997699069999999
Q gi|254780716|r 10 GLGSMGSNLSLNILDKGFRLAV-YNK-DFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQLID 87 (475)
Q Consensus 10 GLG~MG~~mA~nL~~~G~~V~v-ydr-~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi~ 87 (475)
T Consensus 8 g~GGIGtAIC~rL~~dG~~V~An~~p~N~~~a~~W~~~~~~~g~~~~----------------~~~~DV~~~e~c~~~v~ 71 (244)
T TIGR01829 8 GTGGIGTAICTRLAKDGYRVAANYVPSNEERAEAWLQEQGAQGFDFA----------------VVEGDVSSFEDCKAAVA 71 (244)
T ss_pred CCCCHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEE----------------EEECCCCCHHHHHHHHH
T ss_conf 87744689999998759889881789825899999986269851478----------------98727677789999999
Q ss_pred HHHHCCCCCCEEEECCCCCHHH
Q ss_conf 9972078998999679865789
Q gi|254780716|r 88 KLKPLLSPEDILLDGGNSHFCD 109 (475)
Q Consensus 88 ~l~~~l~~g~iiID~sts~~~~ 109 (475)
T Consensus 72 ~v~a~lGpvDvLVNNAGITRD~ 93 (244)
T TIGR01829 72 KVEAELGPVDVLVNNAGITRDK 93 (244)
T ss_pred HHHHCCCCEEEEEECCCCCCCH
T ss_conf 9997119536898688644030