HHsearch alignment for GI: 254780716 and conserved domain: TIGR01921
>TIGR01921 DAP-DH diaminopimelate dehydrogenase; InterPro: IPR010190 This entry represents the diaminopimelate dehydrogenase enzyme which provides an alternate (shortcut) route of lysine biosynthesis in Corynebacterium, Bacterioides, Porphyromonas and other species. The enzyme from Corynebacterium glutamicum has been crystallized and characterised ..
Probab=95.80 E-value=0.19 Score=30.19 Aligned_cols=183 Identities=19% Similarity=0.229 Sum_probs=116.5
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHC-CCEE-EEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCC
Q ss_conf 9988056981571116889999978-9859-9973998999999971221127840328989998605778899997699
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDK-GFRL-AVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTD 78 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~-G~~V-~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~ 78 (475)
T Consensus 1 M~kiRaaIVGYGNlG~~V~~ai~~~PDmElvgv~~Rrd~~t~~va~~--------~~vy~V~~~~K~~~dvdv~iLC~gs 72 (326)
T TIGR01921 1 MSKIRAAIVGYGNLGKSVEEAIQQAPDMELVGVFRRRDAETLDVAEE--------LAVYAVVEDEKELEDVDVLILCTGS 72 (326)
T ss_pred CCEEEEEEECCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHC--------CCHHHHHHHHHCCCCEEEEEECCCC
T ss_conf 97057888622320079999984089804899887078875761122--------5202222223202882599973886
Q ss_pred HHHHHHHHHHHHHCCCCCCEEEECCCCCHH--HHHHHH-HHHHHCCCCEECCCCCCCCCCCCCCC-EEE-EECCHHHHHH
Q ss_conf 069999999997207899899967986578--999999-99984799430675467600035684-378-8454899988
Q gi|254780716|r 79 GDPVDQLIDKLKPLLSPEDILLDGGNSHFC--DTQIRS-LQLSEKGIYFIGIGVSGGVKGARSGA-SLM-VGGNEKAYNR 153 (475)
Q Consensus 79 g~~v~~vi~~l~~~l~~g~iiID~sts~~~--~t~~~~-~~l~~kgi~fid~pVSGG~~gA~~G~-slM-vGG~~~~~~~ 153 (475)
T Consensus 73 at----d~pe~~p~fA~~~nTvDsfD~H~~Ip~~r~~~DaaA~~~------------------g~VSvis~GWDPG~fSi 130 (326)
T TIGR01921 73 AT----DLPEQKPYFAAFINTVDSFDIHTDIPDLRRTLDAAAKEA------------------GAVSVISAGWDPGLFSI 130 (326)
T ss_pred CC----CCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHC------------------CCEEEEEECCCCCCHHH
T ss_conf 45----554345100122101236502242078999999999861------------------98789983478872679
Q ss_pred HHHHHHHHHCCCCCCCEEEEECCC-CHHH--HHHHHHHHHHHHH-HHH-HHHHHHHHHHH--CCCCHHHHH
Q ss_conf 899999875015678618985698-7467--8988776787888-999-89999999964--289978999
Q gi|254780716|r 154 VENILLSISAKYQNSPCCALLGPD-GSGH--FVKMIHNGIEYAN-MQL-IADIYGILRDS--LNKNPLEIS 217 (475)
Q Consensus 154 ~~piL~~iaak~~~~~cv~y~G~~-GsGh--~vKMVhNgIey~~-mq~-iaE~~~~l~~~--~~~~~~~i~ 217 (475)
T Consensus 131 ~Rv~geA~lp~g~---tyTfwGpGlS~GHsdAvrrI-dGVk~Av~yTlP~~DA~E~~R~GE~~~LTg~~~H 197 (326)
T TIGR01921 131 NRVLGEAILPKGI---TYTFWGPGLSQGHSDAVRRI-DGVKAAVQYTLPIKDALEKVRRGEAEELTGKEIH 197 (326)
T ss_pred HHHHHHHHHCCCC---EEEEECCCCCCCHHHHHHHH-HHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCEE
T ss_conf 9999997501686---13323788664358988765-6678886417885788898626888888756500