HHsearch alignment for GI: 254780716 and conserved domain: TIGR01963
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase; InterPro: IPR011294 This entry represents a subfamily of the short chain dehydrogenases. Characterised members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polymers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.; GO: 0003858 3-hydroxybutyrate dehydrogenase activity.
Probab=94.11 E-value=0.45 Score=27.49 Aligned_cols=184 Identities=15% Similarity=0.187 Sum_probs=101.4
Q ss_pred HHHHHHHHHHHCCCEEEEEECC--HHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf 1168899999789859997399--89999999712211278403289899986057788999976990699999999972
Q gi|254780716|r 14 MGSNLSLNILDKGFRLAVYNKD--FELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQLIDKLKP 91 (475)
Q Consensus 14 MG~~mA~nL~~~G~~V~vydr~--~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi~~l~~ 91 (475)
T Consensus 13 IG~~iA~~LA~aGa~v~~~d~~~~~~~~~~~~~~~~~~G~~v~~----------------~~~D~T~~~e~~~~~~~~~~ 76 (258)
T TIGR01963 13 IGLAIAKALAAAGANVVVNDLGEADEGAEAAAKVATDAGGSVIY----------------LVADVTKEEEIADMIQAVAA 76 (258)
T ss_pred HHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEE----------------EECCCCCHHHHHHHHHHHHH
T ss_conf 78999999987298899846788789999999999961883577----------------51478888999999999999
Q ss_pred CCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCC-EEEEECCHHHHHHHHHHHHHHHCCCCC-CC
Q ss_conf 0789989996798657899999999984799430675467600035684-378845489998889999987501567-86
Q gi|254780716|r 92 LLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGVKGARSGA-SLMVGGNEKAYNRVENILLSISAKYQN-SP 169 (475)
Q Consensus 92 ~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~~gA~~G~-slMvGG~~~~~~~~~piL~~iaak~~~-~~ 169 (475)
T Consensus 77 ~fG~~DiLVN--N---------------AG~QhVa-PiEeFP~~~w~~iiav~LtsaF~t~raAlP~Mk~---~gwGGR- 134 (258)
T TIGR01963 77 EFGGLDILVN--N---------------AGIQHVA-PIEEFPPEKWDRIIAVMLTSAFHTIRAALPHMKK---QGWGGR- 134 (258)
T ss_pred HHCCCCEEEE--C---------------CCEEECC-CCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCC---CCCCCE-
T ss_conf 8568874884--4---------------6401417-6547786678737302168889999750643213---785537-
Q ss_pred EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCC
Q ss_conf 189856987467898877678788899989999999964-2899789999998606884430799999999974056799
Q gi|254780716|r 170 CCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDS-LNKNPLEISHLFSKWDTGKLSSYLIKITAEILSSSDTITG 248 (475)
Q Consensus 170 cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~-~~~~~~~i~~vf~~w~~~~~~syLl~i~~~il~~k~~~~g 248 (475)
T Consensus 135 -IiNIAS~----------HGLvA---Sp~KSAYVAAKHG~~GLTKv--~AL-E~A~~g--------iT~NaiCPGYV--~ 187 (258)
T TIGR01963 135 -IINIASV----------HGLVA---SPFKSAYVAAKHGLIGLTKV--LAL-EVAAHG--------ITANAICPGYV--R 187 (258)
T ss_pred -EEEEEEE----------CCCCC---CCCHHHHHHHHHHHHHHHHH--HHH-HCCCCC--------CEEEEECCCCC--C
T ss_conf -9971010----------00003---53213456774302121155--554-204788--------75866728756--7
Q ss_pred CCCHHH-CCCCCCCC
Q ss_conf 952001-02333658
Q gi|254780716|r 249 MPIIDV-ICDKASQK 262 (475)
Q Consensus 249 ~~lid~-i~d~~~~k 262 (475)
T Consensus 188 TPLV~~Qi~DqAk~r 202 (258)
T TIGR01963 188 TPLVEKQIADQAKTR 202 (258)
T ss_pred CHHHHHHHHHHHHHC
T ss_conf 554676589998651