HHsearch alignment for GI: 254780716 and conserved domain: TIGR03206
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=96.71 E-value=0.024 Score=36.80 Aligned_cols=82 Identities=22% Similarity=0.395 Sum_probs=61.2
Q ss_pred EEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 5698--15711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 6 IGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 6 IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
T Consensus 5 valITG~s~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~g~~~----------------~~~~~Dv~d~~~v~ 68 (250)
T TIGR03206 5 TAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNA----------------QAFACDITDRDSVD 68 (250)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCE----------------EEEEECCCCHHHHH
T ss_conf 99996857689999999999879999999798899999999999539928----------------99994489999999
Q ss_pred HHHHHHHHCCCCCCEEEECC
Q ss_conf 99999972078998999679
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~s 103 (475)
T Consensus 69 ~~v~~~~~~~G~iDilvnnA 88 (250)
T TIGR03206 69 TAVAAAEQALGPVDVLVNNA 88 (250)
T ss_pred HHHHHHHHHCCCCCEEEECC
T ss_conf 99999999759997999898