HHsearch alignment for GI: 254780716 and conserved domain: cd00300

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=96.07  E-value=0.092  Score=32.54  Aligned_cols=99  Identities=20%  Similarity=0.354  Sum_probs=59.4

Q ss_pred             EEEEECCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHC---CCC--CCCCEECCCHHHHHHHCCCCCEEEEECCC
Q ss_conf             5698157111688999997898--5999739989999999712---211--27840328989998605778899997699
Q gi|254780716|r    6 IGIIGLGSMGSNLSLNILDKGF--RLAVYNKDFELTDVFIKKI---SGL--SQKVIVTKNLEQMVEAVCKPRKILMMVTD   78 (475)
Q Consensus         6 IGiIGLG~MG~~mA~nL~~~G~--~V~vydr~~~~~~~l~~~~---~~~--~~~~~~~~s~~e~v~~l~~pr~Iil~vp~   78 (475)
T Consensus         1 V~IIGaG~VG~~~A~~l~~~~l~~el~L~Di~~~~a~g~a~Dl~~~~~~~~~~~~~~~~~~~~----~~daDvvVitaG~   76 (300)
T cd00300           1 ITIIGAGNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGDYAD----AADADIVVITAGA   76 (300)
T ss_pred             CEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEECCCCHHH----HCCCCEEEECCCC
T ss_conf             989896889999999998679988799981899811568888772563468853982798899----6799999987898


Q ss_pred             ----H-----------HHHHHHHHHHHHCCCCCCEEEECCCCCHHHHH
Q ss_conf             ----0-----------69999999997207899899967986578999
Q gi|254780716|r   79 ----G-----------DPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQ  111 (475)
Q Consensus        79 ----g-----------~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~  111 (475)
T Consensus        77 ~rkpg~tR~dll~~Na~I~k~i~~~i~~~-~p~~ivivvtN--PvDv~  121 (300)
T cd00300          77 PRKPGETRLDLINRNAPILRSVITNLKKY-GPDAIILVVSN--PVDIL  121 (300)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHC-CCCCEEEECCC--CHHHH
T ss_conf             99979988999998889999999999841-99718998579--66999