HHsearch alignment for GI: 254780716 and conserved domain: cd01078
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=95.63 E-value=0.21 Score=29.98 Aligned_cols=100 Identities=15% Similarity=0.223 Sum_probs=71.0
Q ss_pred EEEEEE-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCC-CCCC--CEECCCHHHHHHHCCCCCEEEEECCCHH
Q ss_conf 056981-57111688999997898599973998999999971221-1278--4032898999860577889999769906
Q gi|254780716|r 5 DIGIIG-LGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISG-LSQK--VIVTKNLEQMVEAVCKPRKILMMVTDGD 80 (475)
Q Consensus 5 ~IGiIG-LG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~-~~~~--~~~~~s~~e~v~~l~~pr~Iil~vp~g~ 80 (475)
T Consensus 30 ~~~V~G~tG~vG~~~A~~lA~~Ga~v~lv~R~~ek~~~~a~~i~~r~g~~~~~~~~~~~~~~~~~l~~adiV~~a~aAGv 109 (194)
T cd01078 30 TAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAGAAGV 109 (194)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEECCHHHH
T ss_conf 89998588578999999999839979999587888999999999970987311357887789977466989996427778
Q ss_pred HHHHHHHHHHHCCCCCCEEEECCCCCH
Q ss_conf 999999999720789989996798657
Q gi|254780716|r 81 PVDQLIDKLKPLLSPEDILLDGGNSHF 107 (475)
Q Consensus 81 ~v~~vi~~l~~~l~~g~iiID~sts~~ 107 (475)
T Consensus 110 --~-~~~~~~~~~k~l~Vv~DVNAvPP 133 (194)
T cd01078 110 --E-LLEKLAWAPKPLAVAADVNAVPP 133 (194)
T ss_pred --H-HHHHHHHCCCCCEEEEECCCCCC
T ss_conf --8-87888850888659986589998