HHsearch alignment for GI: 254780716 and conserved domain: cd01338
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=92.98 E-value=0.8 Score=25.60 Aligned_cols=105 Identities=18% Similarity=0.213 Sum_probs=58.5
Q ss_pred CEEEEEEC-CHHHHHHHHHHHHCC-------CEEEEEECCHHH--HH----HHHHHCCCCCCCCEECCCHHHHHHHCCCC
Q ss_conf 80569815-711168899999789-------859997399899--99----99971221127840328989998605778
Q gi|254780716|r 4 ADIGIIGL-GSMGSNLSLNILDKG-------FRLAVYNKDFEL--TD----VFIKKISGLSQKVIVTKNLEQMVEAVCKP 69 (475)
Q Consensus 4 ~~IGiIGL-G~MG~~mA~nL~~~G-------~~V~vydr~~~~--~~----~l~~~~~~~~~~~~~~~s~~e~v~~l~~p 69 (475)
T Consensus 3 ~KV~IiGAaG~IG~~la~~la~g~l~g~~~~v~l~L~Di~~~~~~l~G~amDl~~~a~~~~~~v~~~~~~~~---a~~~a 79 (322)
T cd01338 3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITDDPNV---AFKDA 79 (322)
T ss_pred EEEEEECCCCHHHHHHHHHHHHCHHCCCCCEEEEEEECCCCCCCCCCEEEEEHHHCCCCCCCCEEEECCHHH---HHCCC
T ss_conf 099998999689999999997111307997269999757575666765774453267654587797488789---83788
Q ss_pred CEEEEECC---------------CHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHH
Q ss_conf 89999769---------------906999999999720789989996798657899999
Q gi|254780716|r 70 RKILMMVT---------------DGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIR 113 (475)
Q Consensus 70 r~Iil~vp---------------~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~ 113 (475)
T Consensus 80 DvVvitaG~prkPG~tR~DLl~~Na~I~~~~~~~i~~~a~p~~~vivvsN--Pvd~~~~ 136 (322)
T cd01338 80 DWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGN--PCNTNAL 136 (322)
T ss_pred CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC--HHHHHHH
T ss_conf 78999368789989818999998689999999999975798838999578--1888999