>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral

Probab=96.51 E-value=0.057 Score=34.08 Aligned_cols=115 Identities=20% Similarity=0.164 Sum_probs=67.3 Q ss_pred CCEEEEEECCHHHHHHHHHHHHCCCEE-EEEECC----------HHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCE Q ss_conf 880569815711168899999789859-997399----------899999997122112784032898999860577889 Q gi|254780716|r 3 QADIGIIGLGSMGSNLSLNILDKGFRL-AVYNKD----------FELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRK 71 (475) Q Consensus 3 k~~IGiIGLG~MG~~mA~nL~~~G~~V-~vydr~----------~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~ 71 (475) T Consensus 23 g~~vaVqGfGnVG~~~a~~l~~~GakvvavsD~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~DI 100 (217) T cd05211 23 GLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVALGGSARVKVQDYFPGEAILG--LDVDI 100 (217) T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC--CCCCE T ss_conf 9999998988999999999998599899998578717789998699999999818965366653059865003--67768 Q ss_pred EEEECCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEEC Q ss_conf 9997699069999999997207899899967986578999999999847994306 Q gi|254780716|r 72 ILMMVTDGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIG 126 (475) Q Consensus 72 Iil~vp~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid 126 (475) T Consensus 101 liPaAl~~~I~~~~a~~i----~-ak~I~EgAN~P~--t~ea~~iL~~rgI~viP 148 (217) T cd05211 101 FAPCALGNVIDLENAKKL----K-AKVVAEGANNPT--TDEALRILHERGIVVAP 148 (217) T ss_pred EEECCCCCCCCHHHHHHH----C-CEEEECCCCCCC--CHHHHHHHHHCCCEEEC T ss_conf 964244588798999871----7-728950678998--97899999978998947

HHsearch alignment for GI: 254780716 and conserved domain: cd05211