Query gi|254780716|ref|YP_003065129.1| 6-phosphogluconate dehydrogenase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 475
No_of_seqs 253 out of 3103
Neff 6.4
Searched_HMMs 39220
Date Sun May 29 19:53:30 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780716.hhm -d /home/congqian_1/database/cdd/Cdd.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR00873 gnd 6-phosphoglucona 100.0 0 0 1414.0 39.6 465 5-470 1-480 (480)
2 PTZ00142 6-phosphogluconate de 100.0 0 0 1219.1 51.5 468 2-469 4-474 (474)
3 COG0362 Gnd 6-phosphogluconate 100.0 0 0 1224.7 45.5 473 1-474 1-473 (473)
4 PRK09287 6-phosphogluconate de 100.0 0 0 1201.3 51.0 458 14-472 1-459 (459)
5 KOG2653 consensus 100.0 0 0 1114.3 41.2 472 1-474 1-479 (487)
6 pfam00393 6PGD 6-phosphoglucon 100.0 0 0 790.4 30.4 289 180-469 1-290 (290)
7 PRK09599 6-phosphogluconate de 100.0 0 0 628.5 29.8 276 5-296 2-278 (301)
8 PRK12490 6-phosphogluconate de 100.0 0 0 606.3 29.3 275 5-297 2-277 (298)
9 TIGR00872 gnd_rel 6-phosphoglu 100.0 0 0 599.5 23.0 322 5-459 3-341 (341)
10 COG1023 Gnd Predicted 6-phosph 100.0 0 0 561.5 26.5 274 5-296 2-277 (300)
11 PRK11559 garR tartronate semia 100.0 1.4E-45 0 356.7 26.3 254 5-285 3-261 (295)
12 TIGR01692 HIBADH 3-hydroxyisob 100.0 0 0 360.6 20.1 199 8-222 1-203 (290)
13 COG2084 MmsB 3-hydroxyisobutyr 100.0 1.7E-44 0 347.5 29.0 255 5-286 2-262 (286)
14 TIGR01505 tartro_sem_red 2-hyd 100.0 1.6E-42 0 333.0 16.8 252 5-283 1-257 (291)
15 KOG0409 consensus 100.0 1.2E-40 2.8E-45 319.1 24.6 259 3-287 35-298 (327)
16 pfam03446 NAD_binding_2 NAD bi 100.0 2.6E-36 6.6E-41 287.2 16.2 159 1-176 1-163 (163)
17 COG1023 Gnd Predicted 6-phosph 99.9 2.4E-21 6.1E-26 176.9 8.2 133 316-459 167-300 (300)
18 PRK09599 6-phosphogluconate de 99.7 1.8E-15 4.5E-20 133.6 13.1 133 315-458 167-300 (301)
19 PRK12490 6-phosphogluconate de 99.6 2.8E-15 7.1E-20 132.2 11.9 133 315-458 165-298 (298)
20 TIGR03026 NDP-sugDHase nucleot 99.6 5.9E-12 1.5E-16 107.7 22.7 208 5-221 2-244 (411)
21 PRK11064 wecC UDP-N-acetyl-D-m 99.5 2.1E-11 5.4E-16 103.6 22.1 209 1-221 1-248 (415)
22 TIGR00872 gnd_rel 6-phosphoglu 99.5 5.2E-14 1.3E-18 122.8 6.1 81 208-297 238-319 (341)
23 COG0677 WecC UDP-N-acetyl-D-ma 99.4 2.4E-10 6.2E-15 95.8 21.1 255 4-282 10-304 (436)
24 PRK07502 cyclohexadienyl dehyd 99.4 6.1E-11 1.5E-15 100.2 17.8 158 5-177 8-180 (307)
25 PRK07417 arogenate dehydrogena 99.4 6.1E-11 1.5E-15 100.2 16.2 162 4-184 2-176 (280)
26 PRK08507 prephenate dehydrogen 99.3 1.9E-09 4.8E-14 89.2 21.8 162 5-186 2-178 (275)
27 PRK08655 prephenate dehydrogen 99.3 5.6E-09 1.4E-13 85.7 22.1 212 5-242 2-219 (441)
28 PRK06928 pyrroline-5-carboxyla 99.3 7.2E-08 1.8E-12 77.6 26.4 241 1-292 1-259 (275)
29 COG0287 TyrA Prephenate dehydr 99.3 7.3E-10 1.9E-14 92.2 15.8 163 3-177 3-172 (279)
30 PRK12491 pyrroline-5-carboxyla 99.2 9.5E-08 2.4E-12 76.7 25.6 246 1-287 1-257 (272)
31 PRK07680 late competence prote 99.2 1.2E-07 3.2E-12 75.8 25.3 257 5-303 2-269 (273)
32 PRK11880 pyrroline-5-carboxyla 99.2 8.8E-08 2.2E-12 76.9 23.6 243 1-286 1-254 (267)
33 pfam03721 UDPG_MGDP_dh_N UDP-g 99.2 1.5E-09 3.7E-14 90.0 13.3 113 5-120 2-136 (185)
34 PRK07679 pyrroline-5-carboxyla 99.2 2.7E-07 6.9E-12 73.3 24.6 249 1-288 1-260 (279)
35 PRK07531 bifunctional 3-hydrox 99.1 5.6E-08 1.4E-12 78.3 19.9 193 1-221 1-216 (489)
36 pfam01210 NAD_Gly3P_dh_N NAD-d 99.1 1.3E-09 3.2E-14 90.5 11.4 140 5-149 2-155 (159)
37 PRK06545 prephenate dehydrogen 99.1 9.6E-09 2.4E-13 84.0 15.8 165 5-185 2-181 (357)
38 PRK00094 gpsA NAD(P)H-dependen 99.1 1E-08 2.6E-13 83.8 15.6 153 1-160 1-169 (325)
39 PRK05808 3-hydroxybutyryl-CoA 99.1 8E-08 2E-12 77.2 19.3 193 1-221 1-219 (282)
40 PRK06129 3-hydroxyacyl-CoA deh 99.1 9.6E-08 2.5E-12 76.6 18.9 191 4-221 3-220 (308)
41 PRK06522 2-dehydropantoate 2-r 99.1 3.6E-07 9.1E-12 72.4 21.5 97 5-106 2-105 (307)
42 pfam03807 F420_oxidored NADP o 99.0 4.4E-09 1.1E-13 86.5 11.0 91 5-104 1-92 (93)
43 PRK08293 3-hydroxybutyryl-CoA 99.0 1.8E-07 4.5E-12 74.7 18.4 194 1-221 1-222 (288)
44 PRK07660 consensus 99.0 2.9E-07 7.3E-12 73.1 19.0 194 1-222 1-220 (283)
45 PRK06476 pyrroline-5-carboxyla 99.0 1.9E-06 4.8E-11 67.1 23.1 141 5-164 2-146 (255)
46 PRK06035 3-hydroxyacyl-CoA deh 99.0 3.7E-07 9.4E-12 72.3 19.3 194 1-222 1-223 (291)
47 PRK07066 3-hydroxybutyryl-CoA 99.0 3.5E-07 8.9E-12 72.5 18.9 246 4-295 8-282 (321)
48 PRK07530 3-hydroxybutyryl-CoA 99.0 3.8E-07 9.7E-12 72.2 18.9 193 1-221 2-220 (292)
49 PRK06130 3-hydroxybutyryl-CoA 99.0 2.5E-07 6.4E-12 73.6 17.8 191 4-221 6-216 (310)
50 PRK09117 consensus 99.0 3.6E-07 9.2E-12 72.4 18.4 190 4-221 3-218 (282)
51 PRK09260 3-hydroxybutyryl-CoA 98.9 2.4E-07 6.1E-12 73.7 17.0 193 1-221 1-219 (289)
52 PRK07634 pyrroline-5-carboxyla 98.9 1.7E-06 4.2E-11 67.5 20.0 149 1-164 2-159 (245)
53 PRK12439 NAD(P)H-dependent gly 98.9 4E-07 1E-11 72.0 16.0 152 3-160 6-173 (340)
54 PRK08268 3-hydroxybutyryl-CoA 98.9 1.4E-06 3.5E-11 68.1 18.6 191 4-222 4-220 (503)
55 COG0240 GpsA Glycerol-3-phosph 98.8 4.1E-07 1E-11 72.0 15.2 150 5-160 3-168 (329)
56 PRK08229 2-dehydropantoate 2-r 98.8 2.8E-06 7.1E-11 65.8 18.5 98 1-106 2-110 (341)
57 PRK07819 3-hydroxybutyryl-CoA 98.8 3.7E-06 9.4E-11 64.9 18.3 192 4-222 3-221 (284)
58 pfam02153 PDH Prephenate dehyd 98.8 1E-05 2.7E-10 61.6 20.4 152 18-185 1-167 (258)
59 PRK05708 2-dehydropantoate 2-r 98.8 7E-06 1.8E-10 62.9 19.4 114 1-117 1-117 (305)
60 COG0345 ProC Pyrroline-5-carbo 98.8 1.7E-07 4.4E-12 74.8 10.9 242 5-287 3-254 (266)
61 COG1004 Ugd Predicted UDP-gluc 98.7 2.6E-05 6.6E-10 58.7 21.9 206 5-219 2-240 (414)
62 COG1250 FadB 3-hydroxyacyl-CoA 98.7 2.4E-06 6.2E-11 66.3 16.3 194 1-222 1-220 (307)
63 COG2085 Predicted dinucleotide 98.7 8.6E-07 2.2E-11 69.6 14.0 153 1-164 1-174 (211)
64 pfam02737 3HCDH_N 3-hydroxyacy 98.7 7.3E-07 1.9E-11 70.1 13.2 146 5-164 1-173 (180)
65 PRK06249 2-dehydropantoate 2-r 98.7 3.4E-05 8.7E-10 57.8 20.8 97 3-106 5-109 (313)
66 PRK12921 2-dehydropantoate 2-r 98.7 2E-05 5E-10 59.6 19.2 98 5-107 2-106 (306)
67 COG1893 ApbA Ketopantoate redu 98.6 2.4E-05 6.1E-10 58.9 18.2 175 5-188 2-188 (307)
68 PRK11730 fadB multifunctional 98.6 3E-05 7.5E-10 58.3 18.4 192 4-224 314-532 (715)
69 COG0111 SerA Phosphoglycerate 98.6 5.4E-07 1.4E-11 71.1 9.2 110 4-123 143-253 (324)
70 KOG2380 consensus 98.6 5.3E-06 1.4E-10 63.8 14.3 149 5-164 54-214 (480)
71 PRK09287 6-phosphogluconate de 98.6 1E-06 2.6E-11 69.1 10.5 110 316-432 166-279 (459)
72 pfam02826 2-Hacid_dh_C D-isome 98.6 7.2E-07 1.8E-11 70.2 9.4 115 3-129 36-151 (176)
73 PTZ00142 6-phosphogluconate de 98.5 3.9E-07 1E-11 72.1 7.6 114 315-432 180-295 (474)
74 PRK11154 fadJ multifunctional 98.5 7.5E-05 1.9E-09 55.3 19.0 193 4-225 310-529 (706)
75 PRK06436 glycerate dehydrogena 98.5 3.4E-06 8.8E-11 65.2 12.2 109 3-125 122-231 (303)
76 pfam10727 Rossmann-like Rossma 98.5 3.1E-06 7.9E-11 65.5 11.6 96 7-112 1-97 (111)
77 PRK12480 D-lactate dehydrogena 98.5 1.5E-06 3.7E-11 67.9 9.9 115 3-130 146-261 (330)
78 COG1052 LdhA Lactate dehydroge 98.5 3.8E-06 9.6E-11 64.9 11.2 113 4-127 147-260 (324)
79 TIGR03376 glycerol3P_DH glycer 98.5 4E-06 1E-10 64.7 11.2 148 5-159 1-183 (342)
80 PRK07574 formate dehydrogenase 98.5 4.1E-06 1E-10 64.6 11.0 151 4-165 193-360 (385)
81 PRK11790 D-3-phosphoglycerate 98.4 6.1E-06 1.5E-10 63.4 11.2 107 4-123 152-259 (409)
82 PRK11199 tyrA bifunctional cho 98.4 0.00012 3.2E-09 53.7 17.9 176 5-218 100-279 (374)
83 pfam01488 Shikimate_DH Shikima 98.4 2.2E-06 5.5E-11 66.7 8.6 96 3-103 12-108 (134)
84 pfam01408 GFO_IDH_MocA Oxidore 98.4 2.8E-05 7E-10 58.5 14.0 111 5-124 2-116 (120)
85 PRK13581 D-3-phosphoglycerate 98.4 9.7E-06 2.5E-10 61.9 11.5 108 4-124 139-249 (524)
86 PRK08605 D-lactate dehydrogena 98.4 1E-05 2.6E-10 61.7 11.2 116 3-130 146-263 (332)
87 pfam00393 6PGD 6-phosphoglucon 98.4 2.2E-06 5.7E-11 66.6 7.7 113 175-288 133-250 (290)
88 PRK13243 glyoxylate reductase; 98.4 5.4E-06 1.4E-10 63.7 9.7 112 4-126 151-263 (333)
89 PRK06932 glycerate dehydrogena 98.3 1.6E-05 4.1E-10 60.2 11.8 112 4-130 148-260 (314)
90 PRK08410 2-hydroxyacid dehydro 98.3 7.8E-06 2E-10 62.5 10.0 105 4-122 146-251 (311)
91 TIGR00745 apbA_panE 2-dehydrop 98.3 0.0002 5.2E-09 52.1 16.6 176 5-188 1-199 (332)
92 PRK00257 erythronate-4-phospha 98.3 9.1E-06 2.3E-10 62.1 9.3 107 3-123 116-227 (379)
93 KOG0069 consensus 98.3 2E-05 5.1E-10 59.5 10.7 110 4-123 163-273 (336)
94 COG1748 LYS9 Saccharopine dehy 98.2 3.9E-05 1E-09 57.4 12.1 229 1-244 1-282 (389)
95 cd05213 NAD_bind_Glutamyl_tRNA 98.2 1.8E-05 4.5E-10 60.0 10.2 95 2-103 177-273 (311)
96 PRK00045 hemA glutamyl-tRNA re 98.2 2.5E-05 6.3E-10 58.8 10.4 74 3-82 182-256 (429)
97 COG0673 MviM Predicted dehydro 98.2 0.00016 4E-09 53.0 14.2 114 1-123 1-120 (342)
98 PRK06487 glycerate dehydrogena 98.2 2.3E-05 5.7E-10 59.2 9.6 105 4-124 149-254 (317)
99 pfam02558 ApbA Ketopantoate re 98.1 2.9E-05 7.4E-10 58.4 8.7 99 6-106 1-103 (150)
100 pfam07991 IlvN Acetohydroxy ac 98.0 9.8E-05 2.5E-09 54.5 10.4 90 2-101 3-93 (165)
101 PRK05479 ketol-acid reductoiso 98.0 8.5E-05 2.2E-09 54.9 9.7 181 3-214 17-222 (336)
102 pfam03435 Saccharop_dh Sacchar 98.0 0.00018 4.6E-09 52.5 11.4 123 6-133 1-128 (384)
103 PRK13304 L-aspartate dehydroge 98.0 0.00019 4.9E-09 52.3 11.1 172 1-188 1-189 (265)
104 COG0373 HemA Glutamyl-tRNA red 97.9 0.00018 4.6E-09 52.5 10.5 72 3-80 178-250 (414)
105 PRK08818 prephenate dehydrogen 97.9 0.00063 1.6E-08 48.5 13.0 144 3-177 4-156 (373)
106 PRK08306 dipicolinate synthase 97.9 0.00032 8.3E-09 50.6 11.5 246 4-297 3-288 (296)
107 TIGR01915 npdG NADPH-dependent 97.9 9.5E-05 2.4E-09 54.6 8.7 169 5-183 2-209 (233)
108 PRK13302 putative L-aspartate 97.9 0.00041 1.1E-08 49.8 11.9 174 3-188 6-194 (271)
109 PRK13403 ketol-acid reductoiso 97.9 0.00014 3.6E-09 53.3 9.4 187 4-223 17-227 (335)
110 PRK08269 3-hydroxybutyryl-CoA 97.8 0.0023 5.8E-08 44.4 14.4 184 14-222 1-217 (311)
111 COG0059 IlvC Ketol-acid reduct 97.8 0.00024 6.2E-09 51.6 8.9 94 4-108 19-116 (338)
112 TIGR01035 hemA glutamyl-tRNA r 97.8 0.00019 4.8E-09 52.4 8.3 179 3-243 185-369 (436)
113 PRK06823 ornithine cyclodeamin 97.8 0.00026 6.6E-09 51.4 8.7 115 4-127 129-246 (315)
114 PRK10669 putative cation:proto 97.7 0.0022 5.6E-08 44.5 13.2 114 5-127 419-534 (558)
115 COG4007 Predicted dehydrogenas 97.7 0.0074 1.9E-07 40.6 18.5 185 6-209 4-227 (340)
116 PRK11579 putative oxidoreducta 97.7 0.0036 9.1E-08 42.9 13.7 112 1-123 1-117 (346)
117 PRK13940 glutamyl-tRNA reducta 97.6 0.00043 1.1E-08 49.7 8.5 74 4-82 182-256 (414)
118 pfam02423 OCD_Mu_crystall Orni 97.6 0.00081 2.1E-08 47.7 9.7 115 4-127 130-247 (312)
119 COG0569 TrkA K+ transport syst 97.6 0.0029 7.3E-08 43.6 12.5 101 5-108 2-106 (225)
120 PRK13301 putative L-aspartate 97.6 0.0015 3.8E-08 45.7 10.4 118 1-132 1-126 (267)
121 KOG2741 consensus 97.6 0.0039 9.9E-08 42.7 12.5 118 5-128 8-130 (351)
122 PRK12557 H(2)-dependent methyl 97.5 0.011 2.9E-07 39.3 18.1 185 15-216 32-232 (341)
123 PRK08618 ornithine cyclodeamin 97.5 0.00082 2.1E-08 47.6 8.8 114 4-127 128-245 (325)
124 PRK06141 ornithine cyclodeamin 97.5 0.00047 1.2E-08 49.4 7.5 115 4-127 126-242 (313)
125 TIGR02279 PaaC-3OHAcCoADH 3-hy 97.5 0.00023 5.8E-09 51.7 5.7 149 3-163 5-178 (508)
126 PRK07340 ornithine cyclodeamin 97.5 0.0009 2.3E-08 47.4 8.6 162 4-182 126-289 (304)
127 PRK06407 ornithine cyclodeamin 97.5 0.0013 3.3E-08 46.2 9.3 115 4-127 119-237 (302)
128 PRK08291 ornithine cyclodeamin 97.5 0.0011 2.7E-08 46.8 8.6 114 4-126 133-250 (330)
129 COG2423 Predicted ornithine cy 97.5 0.0014 3.7E-08 45.8 9.1 116 4-128 131-250 (330)
130 PRK09496 trkA potassium transp 97.5 0.0064 1.6E-07 41.1 12.4 86 5-93 2-89 (455)
131 PRK13303 L-aspartate dehydroge 97.4 0.0053 1.4E-07 41.7 11.8 171 1-187 1-188 (265)
132 pfam02254 TrkA_N TrkA-N domain 97.4 0.0051 1.3E-07 41.8 11.6 110 6-125 1-112 (115)
133 pfam01262 AlaDh_PNT_C Alanine 97.4 0.0013 3.3E-08 46.2 8.4 100 4-104 21-122 (150)
134 cd01075 NAD_bind_Leu_Phe_Val_D 97.4 0.0033 8.4E-08 43.2 10.3 116 4-133 29-146 (200)
135 PRK03562 glutathione-regulated 97.4 0.015 3.9E-07 38.3 13.4 117 4-129 400-518 (615)
136 PRK03659 glutathione-regulated 97.3 0.018 4.6E-07 37.8 13.6 117 4-129 401-519 (602)
137 KOG2304 consensus 97.3 0.0036 9.1E-08 42.9 9.7 198 3-220 11-232 (298)
138 pfam00389 2-Hacid_dh D-isomer 97.3 0.0026 6.7E-08 43.9 8.9 84 58-149 29-112 (313)
139 PRK03369 murD UDP-N-acetylmura 97.3 0.0097 2.5E-07 39.7 11.6 114 4-124 13-146 (487)
140 PRK07589 ornithine cyclodeamin 97.2 0.0019 4.8E-08 45.0 7.7 116 4-126 130-247 (346)
141 cd01483 E1_enzyme_family Super 97.2 0.0023 5.8E-08 44.4 8.0 123 5-133 1-126 (143)
142 COG4091 Predicted homoserine d 97.2 0.018 4.6E-07 37.8 12.6 118 5-133 19-142 (438)
143 cd01065 NAD_bind_Shikimate_DH 97.2 0.0018 4.6E-08 45.1 7.4 118 3-126 19-137 (155)
144 PRK08643 acetoin reductase; Va 97.2 0.0077 2E-07 40.5 10.4 85 1-103 1-87 (256)
145 PRK05472 redox-sensing transcr 97.2 0.0007 1.8E-08 48.2 4.9 81 4-91 85-168 (211)
146 PRK01710 murD UDP-N-acetylmura 97.2 0.01 2.5E-07 39.7 10.8 115 3-124 14-146 (458)
147 PRK05225 ketol-acid reductoiso 97.2 0.0028 7.2E-08 43.7 7.9 89 4-100 38-129 (489)
148 pfam00899 ThiF ThiF family. Th 97.2 0.0049 1.2E-07 42.0 9.1 124 4-133 2-128 (134)
149 PRK06199 ornithine cyclodeamin 97.1 0.0023 5.9E-08 44.3 7.1 95 4-103 156-259 (379)
150 PRK06046 alanine dehydrogenase 97.1 0.005 1.3E-07 41.9 8.8 114 4-127 130-246 (326)
151 PRK00421 murC UDP-N-acetylmura 97.1 0.033 8.4E-07 35.8 14.0 111 5-123 10-136 (459)
152 PRK01390 murD UDP-N-acetylmura 97.1 0.0096 2.4E-07 39.8 10.0 116 4-128 10-147 (457)
153 COG1712 Predicted dinucleotide 97.1 0.016 4.1E-07 38.1 11.1 111 5-127 2-117 (255)
154 cd01485 E1-1_like Ubiquitin ac 97.1 0.0023 6E-08 44.3 6.7 128 2-133 18-150 (198)
155 PRK08328 hypothetical protein; 97.1 0.0026 6.5E-08 44.0 6.8 125 2-133 26-155 (230)
156 PRK02472 murD UDP-N-acetylmura 97.0 0.023 5.9E-07 37.0 11.7 115 4-124 10-141 (450)
157 PRK07454 short chain dehydroge 97.0 0.018 4.6E-07 37.8 11.1 87 1-103 3-91 (241)
158 cd01492 Aos1_SUMO Ubiquitin ac 97.0 0.0057 1.5E-07 41.5 8.1 124 2-132 20-146 (197)
159 PTZ00082 L-lactate dehydrogena 97.0 0.013 3.3E-07 38.8 9.9 105 1-112 5-136 (322)
160 PRK00258 aroE shikimate 5-dehy 97.0 0.011 2.7E-07 39.4 9.3 11 171-181 125-135 (275)
161 cd05293 LDH_1 A subgroup of L- 97.0 0.044 1.1E-06 34.9 14.2 103 4-113 4-128 (312)
162 PRK00683 murD UDP-N-acetylmura 96.9 0.022 5.5E-07 37.2 10.8 122 1-131 1-138 (418)
163 COG0771 MurD UDP-N-acetylmuram 96.9 0.013 3.4E-07 38.7 9.7 126 4-133 8-148 (448)
164 KOG0068 consensus 96.9 0.011 2.9E-07 39.2 9.3 105 4-119 147-252 (406)
165 pfam02629 CoA_binding CoA bind 96.9 0.0066 1.7E-07 41.0 8.0 80 3-91 3-84 (96)
166 PRK12549 shikimate 5-dehydroge 96.9 0.0035 9E-08 43.0 6.5 12 171-182 130-141 (284)
167 TIGR01087 murD UDP-N-acetylmur 96.9 0.019 4.9E-07 37.5 10.2 129 5-133 1-148 (476)
168 TIGR02853 spore_dpaA dipicolin 96.8 0.014 3.7E-07 38.5 9.2 114 4-131 153-267 (288)
169 PRK00141 murD UDP-N-acetylmura 96.8 0.041 1E-06 35.1 11.5 118 2-126 17-154 (476)
170 PRK10206 putative dehydrogenas 96.8 0.058 1.5E-06 34.0 13.7 114 1-123 1-118 (345)
171 TIGR00873 gnd 6-phosphoglucona 96.8 0.0024 6.2E-08 44.2 4.9 124 320-457 183-314 (480)
172 PRK04308 murD UDP-N-acetylmura 96.8 0.062 1.6E-06 33.8 12.3 117 3-125 5-140 (445)
173 PRK06349 homoserine dehydrogen 96.7 0.019 4.9E-07 37.6 9.1 167 1-202 1-184 (432)
174 PRK05653 fabG 3-ketoacyl-(acyl 96.7 0.026 6.7E-07 36.5 9.7 83 5-103 6-90 (246)
175 TIGR03206 benzo_BadH 2-hydroxy 96.7 0.024 6.2E-07 36.8 9.5 82 6-103 5-88 (250)
176 cd00757 ThiF_MoeB_HesA_family 96.7 0.0081 2.1E-07 40.3 7.1 126 2-133 20-148 (228)
177 PTZ00117 malate dehydrogenase; 96.7 0.028 7.2E-07 36.3 9.7 103 1-112 1-125 (313)
178 PRK00048 dihydrodipicolinate r 96.6 0.067 1.7E-06 33.6 11.4 126 1-180 1-129 (265)
179 PRK07688 thiamine/molybdopteri 96.6 0.01 2.6E-07 39.6 7.2 126 2-133 23-153 (339)
180 PRK12384 sorbitol-6-phosphate 96.6 0.049 1.2E-06 34.6 10.6 85 1-103 1-89 (259)
181 KOG2305 consensus 96.6 0.01 2.6E-07 39.5 7.2 199 1-221 1-222 (313)
182 pfam06408 consensus 96.6 0.075 1.9E-06 33.2 13.6 150 5-185 3-164 (471)
183 cd01491 Ube1_repeat1 Ubiquitin 96.6 0.029 7.4E-07 36.2 9.4 122 1-132 17-141 (286)
184 PRK08862 short chain dehydroge 96.6 0.027 7E-07 36.4 9.3 81 6-102 7-90 (227)
185 cd01493 APPBP1_RUB Ubiquitin a 96.6 0.0072 1.8E-07 40.7 6.3 127 1-131 18-147 (425)
186 PRK09134 short chain dehydroge 96.6 0.037 9.5E-07 35.4 9.9 87 1-103 6-95 (256)
187 PRK07831 short chain dehydroge 96.6 0.042 1.1E-06 35.1 10.2 85 5-103 17-104 (261)
188 pfam05368 NmrA NmrA-like famil 96.6 0.079 2E-06 33.0 11.5 91 8-124 3-97 (232)
189 COG0169 AroE Shikimate 5-dehyd 96.6 0.0096 2.5E-07 39.8 6.8 114 4-123 127-244 (283)
190 PRK05690 molybdopterin biosynt 96.6 0.016 4E-07 38.2 7.9 141 2-153 31-176 (245)
191 PRK11861 bifunctional prephena 96.6 0.01 2.6E-07 39.6 6.9 99 72-177 1-112 (673)
192 cd05292 LDH_2 A subgroup of L- 96.6 0.054 1.4E-06 34.3 10.6 101 5-112 2-123 (308)
193 COG0686 Ald Alanine dehydrogen 96.6 0.02 5.2E-07 37.4 8.4 96 5-102 170-267 (371)
194 PRK06223 malate dehydrogenase; 96.6 0.048 1.2E-06 34.6 10.3 101 5-112 2-125 (312)
195 PRK12475 thiamine/molybdopteri 96.6 0.012 3.1E-07 39.0 7.2 199 2-227 23-226 (337)
196 PTZ00325 malate dehydrogenase; 96.6 0.052 1.3E-06 34.4 10.4 103 1-111 1-123 (313)
197 PRK07666 fabG 3-ketoacyl-(acyl 96.6 0.032 8.1E-07 35.9 9.3 77 11-103 15-91 (238)
198 KOG2711 consensus 96.6 0.029 7.5E-07 36.2 9.1 98 2-103 20-139 (372)
199 PRK01438 murD UDP-N-acetylmura 96.5 0.034 8.7E-07 35.7 9.4 114 4-124 15-151 (481)
200 PRK07576 short chain dehydroge 96.5 0.087 2.2E-06 32.7 11.5 81 6-102 10-92 (260)
201 cd05211 NAD_bind_Glu_Leu_Phe_V 96.5 0.057 1.4E-06 34.1 10.3 115 3-126 23-148 (217)
202 TIGR01327 PGDH D-3-phosphoglyc 96.5 0.026 6.6E-07 36.6 8.5 111 4-126 140-253 (535)
203 PRK06181 short chain dehydroge 96.5 0.033 8.5E-07 35.8 9.0 77 11-103 10-86 (263)
204 cd01337 MDH_glyoxysomal_mitoch 96.5 0.047 1.2E-06 34.7 9.7 71 5-75 2-75 (310)
205 PRK08223 hypothetical protein; 96.5 0.026 6.6E-07 36.6 8.4 137 2-147 26-167 (287)
206 PRK03803 murD UDP-N-acetylmura 96.5 0.093 2.4E-06 32.5 11.5 122 6-132 10-146 (448)
207 PRK07775 short chain dehydroge 96.4 0.038 9.8E-07 35.3 9.1 78 10-103 18-95 (275)
208 PRK09310 aroDE bifunctional 3- 96.4 0.018 4.6E-07 37.8 7.3 117 68-189 103-236 (477)
209 PRK08277 D-mannonate oxidoredu 96.4 0.041 1E-06 35.1 9.1 82 6-103 12-95 (278)
210 PRK07024 short chain dehydroge 96.4 0.083 2.1E-06 32.9 10.7 83 1-102 1-84 (256)
211 PRK05678 succinyl-CoA syntheta 96.4 0.1 2.6E-06 32.2 11.7 120 3-133 8-128 (289)
212 PRK07097 gluconate 5-dehydroge 96.4 0.048 1.2E-06 34.6 9.4 82 6-103 12-95 (265)
213 PRK08644 thiamine biosynthesis 96.4 0.029 7.4E-07 36.2 8.2 120 2-127 26-148 (209)
214 PRK06180 short chain dehydroge 96.4 0.093 2.4E-06 32.5 10.8 84 1-103 1-86 (277)
215 PRK07677 short chain dehydroge 96.4 0.044 1.1E-06 34.9 9.1 81 6-102 5-87 (254)
216 PRK12749 quinate/shikimate deh 96.4 0.037 9.3E-07 35.5 8.7 13 31-43 41-53 (288)
217 PRK02006 murD UDP-N-acetylmura 96.4 0.11 2.8E-06 32.0 11.7 121 2-128 6-155 (501)
218 cd01339 LDH-like_MDH L-lactate 96.3 0.071 1.8E-06 33.4 9.9 100 6-112 1-122 (300)
219 PRK07774 short chain dehydroge 96.3 0.047 1.2E-06 34.7 9.0 82 6-103 8-91 (250)
220 PRK06346 consensus 96.3 0.045 1.1E-06 34.9 8.9 83 6-104 7-91 (251)
221 PRK06124 gluconate 5-dehydroge 96.3 0.06 1.5E-06 33.9 9.5 82 6-103 16-99 (259)
222 COG5495 Uncharacterized conser 96.3 0.11 2.9E-06 31.8 11.1 181 4-209 11-202 (289)
223 TIGR00507 aroE shikimate 5-deh 96.3 0.016 4.1E-07 38.1 6.5 120 3-126 121-249 (286)
224 PRK06949 short chain dehydroge 96.3 0.1 2.6E-06 32.2 10.6 82 6-103 12-94 (258)
225 PRK07890 short chain dehydroge 96.3 0.058 1.5E-06 34.0 9.3 83 5-103 6-90 (258)
226 PRK06482 short chain dehydroge 96.3 0.11 2.7E-06 32.1 10.6 82 1-103 1-84 (276)
227 PRK08085 gluconate 5-dehydroge 96.3 0.055 1.4E-06 34.2 9.1 83 6-104 11-95 (254)
228 COG2344 AT-rich DNA-binding pr 96.3 0.016 4.1E-07 38.2 6.3 81 4-91 85-168 (211)
229 PRK12939 short chain dehydroge 96.3 0.066 1.7E-06 33.6 9.4 83 5-103 8-92 (250)
230 PRK05866 short chain dehydroge 96.2 0.045 1.1E-06 34.8 8.5 76 12-103 50-125 (290)
231 PRK12826 3-ketoacyl-(acyl-carr 96.2 0.073 1.9E-06 33.3 9.6 83 5-103 7-91 (253)
232 PRK09496 trkA potassium transp 96.2 0.13 3.2E-06 31.5 11.4 52 136-190 203-255 (455)
233 TIGR01830 3oxo_ACP_reduc 3-oxo 96.2 0.037 9.4E-07 35.5 8.0 173 14-241 10-232 (238)
234 PRK07832 short chain dehydroge 96.2 0.062 1.6E-06 33.8 9.1 77 12-103 10-86 (272)
235 KOG2012 consensus 96.2 0.028 7.2E-07 36.3 7.4 120 1-131 35-158 (1013)
236 PRK08217 fabG 3-ketoacyl-(acyl 96.2 0.064 1.6E-06 33.7 9.2 78 10-103 13-90 (253)
237 pfam00056 Ldh_1_N lactate/mala 96.2 0.038 9.7E-07 35.4 8.0 104 5-115 2-128 (142)
238 COG1064 AdhP Zn-dependent alco 96.2 0.11 2.8E-06 32.0 10.3 44 4-48 168-212 (339)
239 cd05291 HicDH_like L-2-hydroxy 96.2 0.091 2.3E-06 32.6 9.9 100 5-111 2-123 (306)
240 COG0074 SucD Succinyl-CoA synt 96.2 0.098 2.5E-06 32.3 10.0 220 4-260 9-240 (293)
241 PRK08762 molybdopterin biosynt 96.2 0.04 1E-06 35.2 7.9 125 3-133 138-265 (379)
242 PRK05650 short chain dehydroge 96.2 0.061 1.6E-06 33.8 8.8 75 12-102 10-84 (270)
243 PRK08251 short chain dehydroge 96.1 0.069 1.7E-06 33.5 9.0 86 3-102 2-88 (248)
244 cd01076 NAD_bind_1_Glu_DH NAD( 96.1 0.14 3.5E-06 31.3 10.4 121 3-133 31-166 (227)
245 COG0579 Predicted dehydrogenas 96.1 0.021 5.4E-07 37.2 6.3 114 1-123 1-117 (429)
246 PRK02705 murD UDP-N-acetylmura 96.1 0.15 3.8E-06 31.0 12.8 116 7-124 4-138 (459)
247 PRK05717 oxidoreductase; Valid 96.1 0.093 2.4E-06 32.5 9.5 78 6-102 12-91 (255)
248 cd00300 LDH_like L-lactate deh 96.1 0.092 2.3E-06 32.5 9.4 99 6-111 1-121 (300)
249 pfam01113 DapB_N Dihydrodipico 96.1 0.14 3.5E-06 31.3 10.2 89 5-125 2-93 (122)
250 TIGR03366 HpnZ_proposed putati 96.0 0.15 3.9E-06 30.9 11.3 44 4-47 122-166 (280)
251 COG0362 Gnd 6-phosphogluconate 96.0 0.03 7.7E-07 36.1 6.9 106 320-432 182-291 (473)
252 PRK08265 short chain dehydroge 96.0 0.091 2.3E-06 32.6 9.2 80 5-103 7-88 (261)
253 PRK07479 consensus 96.0 0.096 2.4E-06 32.4 9.3 83 5-103 6-90 (252)
254 PRK06172 short chain dehydroge 96.0 0.09 2.3E-06 32.6 9.1 83 5-103 8-92 (253)
255 PRK05867 short chain dehydroge 96.0 0.081 2.1E-06 32.9 8.9 82 6-103 11-94 (253)
256 PRK09466 metL bifunctional asp 96.0 0.16 4.1E-06 30.8 10.8 18 402-419 670-687 (810)
257 PRK06113 7-alpha-hydroxysteroi 96.0 0.085 2.2E-06 32.8 9.0 82 6-103 13-96 (255)
258 PRK09242 tropinone reductase; 96.0 0.14 3.5E-06 31.3 9.9 84 6-103 12-97 (258)
259 PRK07062 short chain dehydroge 96.0 0.11 2.7E-06 32.1 9.4 82 6-103 10-95 (265)
260 PRK04663 murD UDP-N-acetylmura 96.0 0.16 4.2E-06 30.7 10.5 115 1-125 7-138 (438)
261 PRK08263 short chain dehydroge 96.0 0.16 4.2E-06 30.7 10.9 83 1-103 1-85 (275)
262 PRK12429 3-hydroxybutyrate deh 96.0 0.1 2.5E-06 32.3 9.2 83 5-103 5-89 (258)
263 PRK06139 short chain dehydroge 96.0 0.086 2.2E-06 32.8 8.8 77 11-103 15-91 (324)
264 PRK09424 pntA NAD(P) transhydr 96.0 0.049 1.3E-06 34.5 7.6 36 90-127 80-115 (510)
265 PRK07109 short chain dehydroge 95.9 0.099 2.5E-06 32.3 9.1 81 6-102 11-92 (338)
266 cd00650 LDH_MDH_like NAD-depen 95.9 0.074 1.9E-06 33.2 8.4 102 6-113 1-127 (263)
267 PRK08213 gluconate 5-dehydroge 95.9 0.1 2.6E-06 32.2 9.1 82 6-103 14-97 (259)
268 PRK12743 acetoin dehydrogenase 95.9 0.17 4.4E-06 30.5 10.4 85 1-103 1-88 (253)
269 PRK00066 ldh L-lactate dehydro 95.9 0.17 4.4E-06 30.5 13.2 103 3-112 6-129 (315)
270 PRK03806 murD UDP-N-acetylmura 95.9 0.17 4.4E-06 30.5 13.0 114 4-125 7-135 (438)
271 PRK07201 short chain dehydroge 95.9 0.12 3.2E-06 31.6 9.5 36 10-45 8-46 (663)
272 pfam00208 ELFV_dehydrog Glutam 95.9 0.15 3.8E-06 31.0 9.9 114 4-126 33-161 (237)
273 PRK10538 3-hydroxy acid dehydr 95.9 0.12 3.1E-06 31.7 9.3 73 12-103 10-82 (248)
274 PRK06200 2,3-dihydroxy-2,3-dih 95.9 0.1 2.6E-06 32.3 8.9 75 10-103 14-88 (263)
275 PRK06720 hypothetical protein; 95.9 0.088 2.2E-06 32.7 8.6 82 6-103 18-101 (169)
276 TIGR02356 adenyl_thiF thiazole 95.9 0.078 2E-06 33.1 8.3 124 3-132 21-151 (210)
277 PRK06914 short chain dehydroge 95.9 0.17 4.3E-06 30.6 10.0 88 1-103 1-89 (280)
278 PRK06182 short chain dehydroge 95.9 0.18 4.7E-06 30.3 10.7 81 1-103 1-82 (273)
279 PRK06194 hypothetical protein; 95.8 0.082 2.1E-06 32.9 8.3 82 5-102 7-90 (301)
280 cd00755 YgdL_like Family of ac 95.8 0.12 3E-06 31.8 9.1 136 2-146 10-149 (231)
281 PRK05597 molybdopterin biosynt 95.8 0.14 3.5E-06 31.3 9.3 125 3-133 28-155 (355)
282 TIGR01921 DAP-DH diaminopimela 95.8 0.19 4.9E-06 30.2 10.3 183 1-217 1-197 (326)
283 PRK07523 gluconate 5-dehydroge 95.8 0.19 4.8E-06 30.3 10.0 75 10-103 17-91 (251)
284 PRK07814 short chain dehydroge 95.8 0.13 3.4E-06 31.4 9.2 82 5-102 11-94 (263)
285 PRK09186 flagellin modificatio 95.8 0.14 3.7E-06 31.1 9.4 84 3-103 3-90 (255)
286 CHL00194 ycf39 Ycf39; Provisio 95.8 0.082 2.1E-06 32.9 8.1 109 6-132 3-113 (319)
287 PRK07326 short chain dehydroge 95.8 0.11 2.9E-06 31.9 8.7 80 6-103 7-88 (235)
288 PRK05786 fabG 3-ketoacyl-(acyl 95.8 0.15 3.7E-06 31.1 9.3 80 6-102 8-88 (238)
289 cd01487 E1_ThiF_like E1_ThiF_l 95.8 0.09 2.3E-06 32.6 8.2 121 5-131 1-124 (174)
290 PRK07478 short chain dehydroge 95.8 0.12 3E-06 31.8 8.8 82 5-102 7-90 (254)
291 PRK07035 short chain dehydroge 95.7 0.14 3.6E-06 31.2 9.1 81 6-102 10-92 (252)
292 PRK06138 short chain dehydroge 95.7 0.15 3.9E-06 30.9 9.3 82 5-103 6-89 (252)
293 PRK12409 D-amino acid dehydrog 95.7 0.017 4.3E-07 38.0 4.4 34 1-36 1-34 (410)
294 PRK12829 short chain dehydroge 95.7 0.16 4E-06 30.8 9.3 81 5-103 12-94 (264)
295 PRK12828 short chain dehydroge 95.7 0.19 4.9E-06 30.2 9.7 81 5-103 8-90 (239)
296 PRK05600 thiamine biosynthesis 95.7 0.1 2.5E-06 32.3 8.3 126 2-133 40-168 (370)
297 PRK12936 3-ketoacyl-(acyl-carr 95.7 0.16 4.1E-06 30.8 9.3 75 10-103 14-88 (245)
298 PRK05855 short chain dehydroge 95.7 0.12 3.2E-06 31.6 8.6 72 14-101 327-398 (582)
299 PRK07776 consensus 95.6 0.22 5.6E-06 29.8 9.9 79 6-102 10-90 (252)
300 cd01078 NAD_bind_H4MPT_DH NADP 95.6 0.21 5.2E-06 30.0 9.7 100 5-107 30-133 (194)
301 PRK08340 glucose-1-dehydrogena 95.6 0.16 4.1E-06 30.8 9.1 79 6-101 3-82 (259)
302 PRK06123 short chain dehydroge 95.6 0.22 5.7E-06 29.7 10.0 86 1-103 1-89 (249)
303 PRK05565 fabG 3-ketoacyl-(acyl 95.6 0.14 3.6E-06 31.1 8.8 78 10-103 13-91 (247)
304 PRK07067 sorbitol dehydrogenas 95.6 0.2 5.2E-06 30.0 9.6 80 5-103 6-87 (256)
305 TIGR02371 ala_DH_arch alanine 95.6 0.062 1.6E-06 33.8 6.9 123 4-135 130-267 (327)
306 PRK13394 3-hydroxybutyrate deh 95.5 0.17 4.4E-06 30.6 9.0 83 5-103 8-92 (262)
307 PRK06198 short chain dehydroge 95.5 0.17 4.4E-06 30.5 9.1 82 6-103 9-92 (268)
308 TIGR02717 AcCoA-syn-alpha acet 95.5 0.085 2.2E-06 32.8 7.4 252 5-292 9-339 (457)
309 PRK07231 fabG 3-ketoacyl-(acyl 95.5 0.18 4.5E-06 30.4 9.0 81 5-103 7-89 (250)
310 PRK12548 shikimate 5-dehydroge 95.5 0.085 2.2E-06 32.8 7.4 15 30-44 42-56 (289)
311 PRK07825 short chain dehydroge 95.5 0.2 5.1E-06 30.1 9.2 73 11-103 14-86 (273)
312 PRK06947 glucose-1-dehydrogena 95.4 0.16 4E-06 30.8 8.6 83 5-103 7-92 (252)
313 PRK08324 short chain dehydroge 95.4 0.2 5E-06 30.1 9.0 51 228-282 400-451 (676)
314 PRK12935 acetoacetyl-CoA reduc 95.4 0.18 4.5E-06 30.4 8.8 83 5-103 7-92 (247)
315 pfam03447 NAD_binding_3 Homose 95.4 0.26 6.7E-06 29.2 10.2 105 10-124 1-113 (116)
316 COG0460 ThrA Homoserine dehydr 95.4 0.15 3.9E-06 30.9 8.4 124 1-132 1-144 (333)
317 PRK06500 short chain dehydroge 95.4 0.26 6.7E-06 29.2 9.6 75 10-103 14-88 (249)
318 TIGR03325 BphB_TodD cis-2,3-di 95.4 0.21 5.2E-06 30.0 9.0 79 6-103 7-87 (262)
319 PRK06940 short chain dehydroge 95.4 0.27 6.8E-06 29.1 10.0 85 1-104 3-88 (277)
320 COG0057 GapA Glyceraldehyde-3- 95.4 0.049 1.3E-06 34.6 5.8 166 5-198 3-178 (335)
321 PRK05693 short chain dehydroge 95.4 0.27 6.9E-06 29.1 9.5 76 6-103 4-80 (274)
322 PRK12745 3-ketoacyl-(acyl-carr 95.3 0.28 7E-06 29.0 10.4 87 1-103 1-91 (259)
323 PRK12938 acetyacetyl-CoA reduc 95.3 0.16 4E-06 30.8 8.3 86 1-103 1-89 (246)
324 PRK05134 3-demethylubiquinone- 95.3 0.28 7E-06 29.0 9.5 95 5-101 51-149 (233)
325 PRK08267 short chain dehydroge 95.3 0.2 5E-06 30.1 8.7 79 6-102 4-84 (258)
326 PRK07063 short chain dehydroge 95.3 0.27 6.8E-06 29.1 9.3 83 5-103 8-93 (259)
327 PRK05875 short chain dehydroge 95.2 0.21 5.4E-06 29.9 8.6 81 10-103 15-95 (277)
328 PRK07806 short chain dehydroge 95.2 0.2 5.1E-06 30.1 8.5 81 6-102 8-91 (248)
329 PRK05872 short chain dehydroge 95.2 0.3 7.8E-06 28.7 9.5 79 6-103 11-91 (296)
330 pfam00107 ADH_zinc_N Zinc-bind 95.2 0.3 7.8E-06 28.7 9.8 36 10-48 1-37 (131)
331 PRK05876 short chain dehydroge 95.2 0.2 5.2E-06 30.0 8.4 82 5-102 7-90 (275)
332 PRK06179 short chain dehydroge 95.2 0.31 7.9E-06 28.7 9.5 79 1-103 1-81 (270)
333 PRK08226 short chain dehydroge 95.2 0.31 7.8E-06 28.7 9.3 81 6-103 8-90 (263)
334 PRK06227 consensus 95.2 0.29 7.3E-06 28.9 9.1 82 6-103 7-90 (256)
335 PRK06841 short chain dehydroge 95.2 0.31 7.9E-06 28.6 9.6 79 6-103 17-97 (255)
336 PRK12824 acetoacetyl-CoA reduc 95.1 0.31 8E-06 28.6 10.8 85 1-103 1-88 (245)
337 PRK09730 hypothetical protein; 95.1 0.21 5.4E-06 29.9 8.4 82 6-103 3-87 (247)
338 PRK08063 enoyl-(acyl carrier p 95.1 0.27 6.8E-06 29.2 8.9 84 4-103 4-90 (250)
339 PRK07411 hypothetical protein; 95.1 0.13 3.3E-06 31.4 7.3 125 3-133 38-165 (390)
340 PRK01747 mnmC 5-methylaminomet 95.1 0.033 8.4E-07 35.8 4.2 34 3-36 256-289 (660)
341 PRK06077 fabG 3-ketoacyl-(acyl 95.1 0.26 6.7E-06 29.2 8.7 78 10-103 11-89 (249)
342 COG0002 ArgC Acetylglutamate s 95.0 0.2 5.2E-06 30.0 8.1 210 4-226 3-228 (349)
343 PRK12746 short chain dehydroge 95.0 0.22 5.6E-06 29.8 8.3 43 5-47 7-52 (254)
344 PRK08339 short chain dehydroge 95.0 0.33 8.5E-06 28.4 9.1 81 5-101 9-91 (263)
345 COG0476 ThiF Dinucleotide-util 95.0 0.19 4.9E-06 30.2 7.9 127 1-133 28-157 (254)
346 PRK07102 short chain dehydroge 94.9 0.35 9E-06 28.2 9.6 44 1-46 1-45 (243)
347 PRK12825 fabG 3-ketoacyl-(acyl 94.9 0.36 9.1E-06 28.2 10.9 82 6-103 10-93 (250)
348 cd05191 NAD_bind_amino_acid_DH 94.9 0.14 3.5E-06 31.3 6.9 62 4-103 24-86 (86)
349 PRK09436 thrA bifunctional asp 94.9 0.37 9.3E-06 28.1 9.6 18 403-420 677-694 (817)
350 KOG0023 consensus 94.9 0.27 6.8E-06 29.1 8.3 40 5-45 184-224 (360)
351 pfam01118 Semialdhyde_dh Semia 94.9 0.083 2.1E-06 32.9 5.7 95 5-106 1-100 (121)
352 TIGR01829 AcAcCoA_reduct aceto 94.8 0.26 6.7E-06 29.2 8.2 84 10-109 8-93 (244)
353 PRK08945 short chain dehydroge 94.8 0.37 9.6E-06 28.0 9.8 78 10-102 21-100 (245)
354 PRK07707 consensus 94.8 0.39 9.9E-06 27.9 10.0 44 1-46 1-47 (239)
355 PRK00676 hemA glutamyl-tRNA re 94.7 0.11 2.9E-06 31.9 6.1 23 139-161 99-121 (338)
356 PRK04207 glyceraldehyde-3-phos 94.7 0.22 5.6E-06 29.8 7.5 152 1-188 1-155 (338)
357 PRK07074 short chain dehydroge 94.7 0.41 1E-05 27.8 9.2 78 6-102 4-83 (256)
358 PRK07878 molybdopterin biosynt 94.7 0.13 3.2E-06 31.5 6.2 125 3-133 42-169 (392)
359 smart00859 Semialdhyde_dh Semi 94.7 0.15 3.9E-06 30.9 6.6 99 5-106 1-102 (122)
360 PRK06484 short chain dehydroge 94.7 0.41 1.1E-05 27.7 10.0 78 6-102 7-86 (530)
361 PRK12823 benD 1,6-dihydroxycyc 94.7 0.41 1.1E-05 27.7 8.9 81 5-102 9-91 (260)
362 PRK06484 short chain dehydroge 94.7 0.41 1.1E-05 27.7 9.5 13 111-123 163-175 (530)
363 PRK06114 short chain dehydroge 94.6 0.41 1.1E-05 27.7 9.2 82 6-103 18-102 (262)
364 PRK12827 short chain dehydroge 94.6 0.33 8.3E-06 28.5 8.3 86 6-103 8-95 (251)
365 PRK07236 hypothetical protein; 94.6 0.05 1.3E-06 34.5 4.1 37 1-37 4-40 (386)
366 TIGR03451 mycoS_dep_FDH mycoth 94.6 0.43 1.1E-05 27.6 10.4 37 6-42 180-217 (358)
367 PRK12550 shikimate 5-dehydroge 94.5 0.18 4.7E-06 30.3 6.8 11 171-181 125-135 (272)
368 PRK05993 short chain dehydroge 94.5 0.44 1.1E-05 27.5 10.6 80 1-103 3-84 (277)
369 PRK06057 short chain dehydroge 94.5 0.45 1.2E-05 27.5 9.8 78 5-103 8-87 (255)
370 cd01080 NAD_bind_m-THF_DH_Cycl 94.4 0.13 3.4E-06 31.4 5.9 77 4-109 45-122 (168)
371 PRK06019 phosphoribosylaminoim 94.4 0.092 2.3E-06 32.5 5.0 68 3-74 7-74 (377)
372 PRK06101 short chain dehydroge 94.3 0.48 1.2E-05 27.2 9.9 41 6-46 4-45 (241)
373 pfam02882 THF_DHG_CYH_C Tetrah 94.3 0.18 4.6E-06 30.4 6.3 75 4-107 37-112 (159)
374 PRK09135 pteridine reductase; 94.3 0.49 1.3E-05 27.2 9.3 85 5-104 7-94 (249)
375 PRK06483 short chain dehydroge 94.3 0.5 1.3E-05 27.1 10.5 80 1-103 1-82 (236)
376 COG2910 Putative NADH-flavin r 94.3 0.38 9.6E-06 28.0 8.0 71 5-79 2-73 (211)
377 PRK11863 N-acetyl-gamma-glutam 94.3 0.5 1.3E-05 27.1 8.8 140 1-182 1-154 (314)
378 PRK12937 short chain dehydroge 94.2 0.5 1.3E-05 27.1 8.5 83 5-103 6-91 (245)
379 TIGR01724 hmd_rel coenzyme F42 94.2 0.44 1.1E-05 27.5 8.2 152 14-180 31-197 (341)
380 TIGR03026 NDP-sugDHase nucleot 94.2 0.51 1.3E-05 27.0 9.1 19 51-69 24-42 (411)
381 PRK08936 glucose-1-dehydrogena 94.1 0.53 1.3E-05 27.0 8.6 82 6-103 9-93 (261)
382 PRK00711 D-amino acid dehydrog 94.1 0.078 2E-06 33.1 4.2 32 5-36 2-33 (416)
383 TIGR01963 PHB_DH 3-hydroxybuty 94.1 0.45 1.1E-05 27.5 8.0 184 14-262 13-202 (258)
384 TIGR02415 23BDH acetoin reduct 94.1 0.38 9.6E-06 28.0 7.6 74 12-101 10-85 (258)
385 cd05294 LDH-like_MDH_nadp A la 94.1 0.55 1.4E-05 26.8 9.4 101 5-112 2-128 (309)
386 COG0190 FolD 5,10-methylene-te 94.0 0.4 1E-05 27.8 7.6 75 5-108 158-233 (283)
387 PRK08589 short chain dehydroge 93.9 0.57 1.5E-05 26.7 9.2 82 5-103 7-90 (272)
388 TIGR02354 thiF_fam2 thiamine b 93.9 0.37 9.6E-06 28.0 7.4 131 2-144 20-182 (200)
389 COG0289 DapB Dihydrodipicolina 93.9 0.59 1.5E-05 26.6 9.9 172 5-243 4-178 (266)
390 PRK07041 short chain dehydroge 93.9 0.59 1.5E-05 26.6 8.9 41 6-46 10-51 (240)
391 TIGR03364 HpnW_proposed FAD de 93.8 0.074 1.9E-06 33.3 3.6 32 5-36 2-33 (365)
392 TIGR01318 gltD_gamma_fam gluta 93.8 0.082 2.1E-06 32.9 3.8 34 4-37 144-177 (480)
393 PRK05557 fabG 3-ketoacyl-(acyl 93.8 0.62 1.6E-05 26.4 9.2 82 6-103 7-91 (248)
394 KOG1200 consensus 93.7 0.43 1.1E-05 27.6 7.4 35 13-47 25-59 (256)
395 TIGR00518 alaDH alanine dehydr 93.7 0.34 8.6E-06 28.4 6.8 99 3-103 168-268 (372)
396 KOG1399 consensus 93.7 0.076 1.9E-06 33.2 3.4 37 1-37 4-40 (448)
397 PRK11259 solA N-methyltryptoph 93.6 0.099 2.5E-06 32.3 4.0 34 3-36 3-36 (377)
398 PRK08849 2-octaprenyl-3-methyl 93.6 0.12 3E-06 31.8 4.3 35 1-35 1-35 (384)
399 PRK08374 homoserine dehydrogen 93.6 0.65 1.7E-05 26.3 11.0 142 1-183 1-149 (316)
400 cd05212 NAD_bind_m-THF_DH_Cycl 93.6 0.4 1E-05 27.8 7.0 94 4-133 29-123 (140)
401 pfam00670 AdoHcyase_NAD S-aden 93.5 0.67 1.7E-05 26.2 8.3 91 4-108 24-115 (162)
402 cd05313 NAD_bind_2_Glu_DH NAD( 93.5 0.68 1.7E-05 26.1 10.9 113 3-125 38-174 (254)
403 pfam03059 NAS Nicotianamine sy 93.5 0.68 1.7E-05 26.1 8.4 20 81-100 209-228 (277)
404 COG0300 DltE Short-chain dehyd 93.5 0.68 1.7E-05 26.1 8.9 85 3-102 6-91 (265)
405 pfam01266 DAO FAD dependent ox 93.5 0.11 2.8E-06 32.0 4.0 32 5-36 1-32 (309)
406 COG0039 Mdh Malate/lactate deh 93.4 0.31 7.9E-06 28.7 6.3 103 5-112 2-125 (313)
407 PRK07060 short chain dehydroge 93.4 0.37 9.4E-06 28.1 6.6 38 10-47 17-54 (245)
408 PRK02318 mannitol-1-phosphate 93.3 0.72 1.8E-05 25.9 10.5 41 6-46 3-44 (381)
409 cd01484 E1-2_like Ubiquitin ac 93.3 0.4 1E-05 27.9 6.6 125 5-134 1-129 (234)
410 COG2242 CobL Precorrin-6B meth 93.3 0.73 1.9E-05 25.9 10.2 117 10-133 44-165 (187)
411 PRK12744 short chain dehydroge 93.3 0.72 1.8E-05 26.0 7.9 80 6-103 10-97 (257)
412 PRK08416 7-alpha-hydroxysteroi 93.2 0.74 1.9E-05 25.9 8.7 79 10-103 16-95 (260)
413 pfam03720 UDPG_MGDP_dh_C UDP-g 93.2 0.53 1.3E-05 26.9 7.2 81 13-106 17-97 (99)
414 PRK12859 3-ketoacyl-(acyl-carr 93.2 0.75 1.9E-05 25.8 10.0 82 6-103 9-104 (257)
415 TIGR02352 thiamin_ThiO glycine 93.2 0.14 3.5E-06 31.2 4.2 36 6-41 1-36 (357)
416 PRK09880 L-idonate 5-dehydroge 93.2 0.75 1.9E-05 25.8 11.3 33 6-38 173-206 (343)
417 KOG3124 consensus 93.1 0.11 2.8E-06 32.0 3.5 162 5-181 2-174 (267)
418 PRK09126 hypothetical protein; 93.1 0.15 3.8E-06 31.0 4.2 37 1-37 1-37 (392)
419 PRK08220 2,3-dihydroxybenzoate 93.1 0.78 2E-05 25.7 8.6 74 6-103 10-85 (253)
420 PRK05086 malate dehydrogenase; 93.0 0.58 1.5E-05 26.7 7.1 102 5-112 2-125 (312)
421 PRK06125 short chain dehydroge 93.0 0.79 2E-05 25.7 8.9 38 10-47 15-52 (259)
422 PRK08300 acetaldehyde dehydrog 93.0 0.8 2E-05 25.6 8.4 124 1-163 2-143 (298)
423 TIGR00465 ilvC ketol-acid redu 93.0 0.46 1.2E-05 27.4 6.6 98 3-103 3-103 (344)
424 cd01338 MDH_choloroplast_like 93.0 0.8 2.1E-05 25.6 10.0 105 4-113 3-136 (322)
425 COG4221 Short-chain alcohol de 93.0 0.81 2.1E-05 25.6 9.0 72 13-102 17-88 (246)
426 PRK09072 short chain dehydroge 92.9 0.82 2.1E-05 25.5 9.2 80 5-103 7-87 (262)
427 TIGR01316 gltA glutamate synth 92.8 0.18 4.5E-06 30.5 4.2 143 2-161 141-306 (462)
428 PRK08017 short chain dehydroge 92.8 0.86 2.2E-05 25.4 10.3 79 1-102 1-81 (256)
429 TIGR01850 argC N-acetyl-gamma- 92.7 0.5 1.3E-05 27.2 6.4 211 5-226 2-234 (361)
430 PRK06701 short chain dehydroge 92.7 0.87 2.2E-05 25.4 8.6 81 6-102 47-130 (289)
431 KOG2653 consensus 92.7 0.71 1.8E-05 26.0 7.2 101 321-427 187-288 (487)
432 TIGR01983 UbiG ubiquinone bios 92.7 0.88 2.2E-05 25.3 9.1 97 6-106 86-198 (275)
433 TIGR01763 MalateDH_bact malate 92.7 0.88 2.3E-05 25.3 7.7 102 5-113 3-129 (308)
434 PRK06847 hypothetical protein; 92.6 0.13 3.4E-06 31.3 3.4 37 1-37 1-38 (375)
435 PRK07069 short chain dehydroge 92.6 0.9 2.3E-05 25.2 9.9 78 10-103 7-87 (251)
436 PRK08177 short chain dehydroge 92.6 0.9 2.3E-05 25.2 8.9 39 6-44 4-43 (225)
437 KOG1201 consensus 92.6 0.9 2.3E-05 25.2 7.7 39 8-46 43-82 (300)
438 PRK05442 malate dehydrogenase; 92.6 0.9 2.3E-05 25.2 9.9 109 1-114 1-139 (325)
439 PRK11728 hypothetical protein; 92.6 0.096 2.4E-06 32.4 2.6 36 1-37 1-38 (400)
440 TIGR02992 ectoine_eutC ectoine 92.5 0.24 6E-06 29.5 4.6 92 5-104 131-225 (326)
441 KOG3007 consensus 92.5 0.82 2.1E-05 25.5 7.3 113 6-127 141-260 (333)
442 PRK11036 putative metallothion 92.5 0.94 2.4E-05 25.1 9.8 145 8-164 48-201 (256)
443 pfam04016 DUF364 Domain of unk 92.5 0.94 2.4E-05 25.1 8.5 104 4-127 112-215 (229)
444 COG2227 UbiG 2-polyprenyl-3-me 92.4 0.94 2.4E-05 25.1 9.7 90 11-103 66-161 (243)
445 PRK06196 oxidoreductase; Provi 92.4 0.95 2.4E-05 25.1 9.0 69 13-101 37-105 (316)
446 cd05290 LDH_3 A subgroup of L- 92.4 0.95 2.4E-05 25.1 11.8 68 5-76 1-76 (307)
447 PRK08628 short chain dehydroge 92.4 0.96 2.4E-05 25.1 8.8 81 6-103 9-91 (258)
448 PRK06444 prephenate dehydrogen 92.4 0.96 2.4E-05 25.0 9.3 103 7-159 4-112 (197)
449 TIGR01809 Shik-DH-AROM shikima 92.3 0.42 1.1E-05 27.7 5.6 86 8-94 135-224 (291)
450 PRK12771 putative glutamate sy 92.2 0.23 6E-06 29.6 4.3 34 4-37 138-171 (560)
451 PRK13984 putative oxidoreducta 92.2 0.21 5.5E-06 29.8 4.0 34 4-37 284-317 (604)
452 PRK11908 NAD-dependent epimera 92.2 1 2.6E-05 24.9 8.9 71 1-76 1-76 (347)
453 PRK06475 salicylate hydroxylas 92.2 0.19 4.7E-06 30.3 3.7 36 2-37 1-36 (400)
454 PRK07208 hypothetical protein; 92.1 0.26 6.5E-06 29.3 4.3 187 1-245 1-193 (474)
455 TIGR03201 dearomat_had 6-hydro 92.0 1 2.7E-05 24.8 15.8 21 258-278 172-192 (349)
456 PRK13771 putative alcohol dehy 91.9 1.1 2.7E-05 24.7 13.1 19 260-278 171-189 (332)
457 PRK00377 cbiT cobalt-precorrin 91.9 1.1 2.8E-05 24.6 13.0 135 10-148 50-197 (198)
458 PRK12810 gltD glutamate syntha 91.8 0.3 7.6E-06 28.8 4.4 33 4-36 144-176 (472)
459 pfam00743 FMO-like Flavin-bind 91.8 0.27 6.8E-06 29.1 4.1 34 5-38 3-36 (532)
460 PRK07856 short chain dehydroge 91.7 0.71 1.8E-05 26.0 6.3 73 6-103 10-84 (254)
461 PRK06505 enoyl-(acyl carrier p 91.7 1.1 2.9E-05 24.5 10.2 80 6-102 10-92 (271)
462 PRK08013 hypothetical protein; 91.7 0.28 7.1E-06 29.0 4.1 36 1-36 1-36 (400)
463 PRK03815 murD UDP-N-acetylmura 91.7 1.1 2.9E-05 24.5 9.5 105 5-121 2-115 (401)
464 PRK12809 putative oxidoreducta 91.7 0.26 6.5E-06 29.3 3.9 33 4-36 311-343 (639)
465 COG1233 Phytoene dehydrogenase 91.6 0.34 8.8E-06 28.3 4.6 36 1-36 1-36 (487)
466 PRK12831 putative oxidoreducta 91.6 0.3 7.6E-06 28.8 4.2 33 4-36 141-173 (464)
467 PRK05868 hypothetical protein; 91.4 0.22 5.6E-06 29.7 3.4 35 1-37 1-35 (372)
468 PRK08303 short chain dehydroge 91.4 1.2 3.1E-05 24.3 8.4 91 5-102 9-102 (305)
469 PRK08278 short chain dehydroge 91.4 1.2 3.1E-05 24.3 8.7 88 5-103 7-98 (273)
470 PRK06185 hypothetical protein; 91.3 0.26 6.6E-06 29.2 3.7 37 1-37 4-40 (409)
471 PRK05884 short chain dehydroge 91.3 1.2 3.1E-05 24.2 8.3 36 10-45 8-43 (223)
472 PRK08664 aspartate-semialdehyd 91.3 1.2 3.2E-05 24.2 8.6 161 1-181 1-183 (350)
473 pfam04321 RmlD_sub_bind RmlD s 91.2 1.3 3.2E-05 24.2 8.1 95 8-128 3-98 (284)
474 PRK06813 homoserine dehydrogen 91.1 1 2.6E-05 24.9 6.5 103 1-127 1-121 (341)
475 PRK11749 putative oxidoreducta 91.1 0.38 9.7E-06 28.0 4.4 34 4-37 141-174 (460)
476 PRK06171 sorbitol-6-phosphate 91.1 1.3 3.3E-05 24.1 7.2 73 6-103 11-85 (266)
477 PRK12769 putative oxidoreducta 91.1 0.33 8.4E-06 28.5 4.0 34 4-37 328-361 (654)
478 PTZ00023 glyceraldehyde-3-phos 91.0 0.43 1.1E-05 27.6 4.6 165 1-197 1-177 (337)
479 COG0665 DadA Glycine/D-amino a 91.0 0.42 1.1E-05 27.7 4.5 36 1-36 2-37 (387)
480 PRK08415 enoyl-(acyl carrier p 90.9 1.3 3.4E-05 24.0 11.2 81 5-102 6-90 (274)
481 PRK08850 2-octaprenyl-6-methox 90.9 0.42 1.1E-05 27.7 4.4 35 1-35 2-36 (405)
482 PRK12814 putative NADPH-depend 90.9 0.4 1E-05 27.9 4.3 33 4-36 194-226 (652)
483 PRK13535 erythrose 4-phosphate 90.9 0.33 8.3E-06 28.5 3.9 164 5-198 3-180 (336)
484 PRK09853 putative selenate red 90.9 1.3 3.4E-05 24.0 11.9 33 4-36 551-583 (1032)
485 pfam01494 FAD_binding_3 FAD bi 90.9 0.28 7.2E-06 29.0 3.5 34 4-37 2-35 (349)
486 pfam08659 KR KR domain. This e 90.8 1.3 3.3E-05 24.1 6.8 80 10-102 8-88 (181)
487 PRK08163 salicylate hydroxylas 90.8 0.34 8.8E-06 28.3 3.9 37 1-37 1-38 (396)
488 PRK05854 short chain dehydroge 90.8 1.4 3.5E-05 23.9 8.6 76 13-102 25-100 (314)
489 COG1810 Uncharacterized protei 90.8 1.4 3.5E-05 23.9 9.6 131 1-162 1-134 (224)
490 TIGR01317 GOGAT_sm_gam glutama 90.8 0.37 9.5E-06 28.0 4.0 31 5-35 153-183 (517)
491 COG0026 PurK Phosphoribosylami 90.8 0.46 1.2E-05 27.4 4.5 36 4-39 2-37 (375)
492 cd00704 MDH Malate dehydrogena 90.7 1.4 3.5E-05 23.9 12.5 105 5-114 2-135 (323)
493 PRK07533 enoyl-(acyl carrier p 90.7 1.4 3.5E-05 23.9 9.4 79 6-101 9-90 (254)
494 PRK06617 2-octaprenyl-6-methox 90.7 0.41 1.1E-05 27.7 4.2 34 1-36 1-34 (374)
495 PRK08642 fabG 3-ketoacyl-(acyl 90.7 1.4 3.6E-05 23.8 9.9 79 6-103 9-90 (254)
496 PRK05599 hypothetical protein; 90.6 1.4 3.6E-05 23.8 8.1 80 6-101 3-83 (246)
497 PRK08020 ubiF 2-octaprenyl-3-m 90.6 0.43 1.1E-05 27.6 4.2 36 1-36 1-38 (391)
498 PRK01368 murD UDP-N-acetylmura 90.6 1.4 3.6E-05 23.8 9.6 121 3-131 6-140 (450)
499 PRK12748 3-ketoacyl-(acyl-carr 90.5 1.5 3.7E-05 23.7 8.8 96 1-101 3-101 (257)
500 PRK06935 2-deoxy-D-gluconate 3 90.4 1.5 3.8E-05 23.6 8.1 75 10-101 23-97 (258)
No 1
>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating; InterPro: IPR006113 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) , . Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved . The protein is a homodimer in which the monomers act independently : each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet . NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket . This model does not specify whether the cofactor is NADP only, NAD only, or both.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0050661 NADP binding, 0006098 pentose-phosphate shunt.
Probab=100.00 E-value=0 Score=1413.98 Aligned_cols=465 Identities=46% Similarity=0.805 Sum_probs=455.4
Q ss_pred EEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH--
Q ss_conf 056981571116889999978985999739989999999712211278403289899986057788999976990699--
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV-- 82 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v-- 82 (475)
+||||||+|||+|+|+|+.++||+|+|||||++||++|+++. ..++++.+++|++|||++|++||+||+||.+|++|
T Consensus 1 diGviGLAVMG~NLaLN~~d~GF~V~VyNRt~~Ktd~fl~~~-~~gk~i~g~~~ieeFV~~Le~PRKImLMVkAG~pVda 79 (480)
T TIGR00873 1 DIGVIGLAVMGSNLALNMADHGFTVAVYNRTPEKTDEFLKER-AKGKKIVGAYSIEEFVQSLERPRKIMLMVKAGAPVDA 79 (480)
T ss_pred CCCEEEECHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCC-CCCCCCCCCCCHHHHHHHCCCCCEEEEEEECCCCCCH
T ss_conf 951586041357899988746982799726847999998603-7888533432679999850688728887753885377
Q ss_pred HHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHH
Q ss_conf 99999997207899899967986578999999999847994306754676000356843788454899988899999875
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGVKGARSGASLMVGGNEKAYNRVENILLSIS 162 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~~gA~~G~slMvGG~~~~~~~~~piL~~ia 162 (475)
|+||++|+|+|++||||||+|||+|+||+||.++|+++||+||++||||||+|||+|||||+||++++|+.++|||++||
T Consensus 80 D~~I~~L~P~LE~GDiIIDGGNS~Y~DT~RR~~eL~~~Gi~FvG~GvSGGEeGAl~GPSiMPGG~~~Ay~~~~PIl~~IA 159 (480)
T TIGR00873 80 DAVINSLLPLLEKGDIIIDGGNSHYKDTERRYKELKAKGILFVGVGVSGGEEGALKGPSIMPGGSAEAYPLVAPILQKIA 159 (480)
T ss_pred HHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 89999964435899888758878846657899999864981673013245302137887788879878999967887655
Q ss_pred CCCC---CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 0156---7861898569874678988776787888999899999999642899789999998606884430799999999
Q gi|254780716|r 163 AKYQ---NSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKNPLEISHLFSKWDTGKLSSYLIKITAEI 239 (475)
Q Consensus 163 ak~~---~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~~i~~vf~~w~~~~~~syLl~i~~~i 239 (475)
||++ |+|||.|+||.||||||||||||||||+||+|||+|.|||++++|++++|+.||.+||+++|+|||||||++|
T Consensus 160 Akv~dPdg~PCC~wiG~~GAGHyVKMVHNGIEYGDMQLI~EAY~~lK~~L~L~~~~i~~vF~~WN~g~L~SYLIeIT~~I 239 (480)
T TIGR00873 160 AKVDDPDGEPCCTWIGPDGAGHYVKMVHNGIEYGDMQLIAEAYDILKEGLGLSNEEIAEVFTEWNNGELDSYLIEITADI 239 (480)
T ss_pred HHCCCCCCCCCEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH
T ss_conf 42168532942243786798430532576711777989999999998651888889999985523777642688999998
Q ss_pred HHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCCCC--CH
Q ss_conf 97405679995200102333658716778988775178885146777888775005779998752487-7666645--27
Q gi|254780716|r 240 LSSSDTITGMPIIDVICDKASQKGTGIRSIIEGHKLSSSMTITETAIFARNLSLYRDESKKMQSFFNP-SSHFPLK--CF 316 (475)
Q Consensus 240 l~~k~~~~g~~lid~i~d~~~~kgTg~Wt~~~a~~lgvp~p~i~~av~aR~~S~~k~~R~~~~~~~~~-~~~~~~~--~~ 316 (475)
|++||+.||+||||+|+|.|+||||||||++.|||+|||+|.|.+|||||++|+.|++|.++++.++. +...... ++
T Consensus 240 L~~kD~~TG~pLvd~ILD~AgQKGTGkWT~~~ALd~G~P~tlI~EsVfAR~lSs~K~~R~~A~~~l~g~p~~~~~~~~D~ 319 (480)
T TIGR00873 240 LAKKDEDTGKPLVDKILDTAGQKGTGKWTAIDALDLGVPLTLITESVFARYLSSLKEERVAASKLLSGDPLAEEKALQDK 319 (480)
T ss_pred HHCCCCCCCCCEEHHEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH
T ss_conf 62135002751231100334688674157667653389820799999999884128999999973488965677863466
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCCCCCCHHHH
Q ss_conf 88999999999999999999999999961101456679889999851894685378999999987088852000798999
Q gi|254780716|r 317 DSFVKDLENALYASTILSFTQGFWVIGKSSEKYSWSLSLATIARIWRAGCIIRSQILNDIVKSLTEDPSSTNLLNIPSIS 396 (475)
Q Consensus 317 ~~~i~~L~~a~~~~~i~syaQGf~ll~~as~~y~w~l~l~~ia~iW~~GCIIrs~lL~~i~~~~~~~~~l~~Ll~~~~~~ 396 (475)
+.||++||+|||+|+||||||||+||++||++|+|+||+++||.+||+||||||.||+.|++||+++|+|.||+++|+|.
T Consensus 320 ~~fi~~vr~ALY~sKI~SYAQGF~ll~~aS~~yGWdLnlg~IAliWRGGCIIRs~FL~~I~~Af~~~P~l~nLl~a~YF~ 399 (480)
T TIGR00873 320 EEFIEDVRQALYASKIVSYAQGFMLLKEASEEYGWDLNLGEIALIWRGGCIIRSAFLDKIKKAFAANPNLANLLLAPYFK 399 (480)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
T ss_conf 88999999998877799899989999999987288998135887763244256687678899987187730014576799
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEE-----EECCCCC--CCCCCCC
Q ss_conf 99995247699999999983998479999999998621788758999987610457322-----4248987--6356566
Q gi|254780716|r 397 EKVKKTIPSLRRIVVTCTENGYPVPSLSAALSYFDTFIHDRGTANLIQAQRDFFGSHGF-----DRKDKIS--EPHGPWQ 469 (475)
Q Consensus 397 ~~i~~~~~~lr~vv~~~i~~gip~P~lsssL~y~~~~~~~~~~~nliqaqRD~FGaH~~-----~r~D~~g--~~H~~W~ 469 (475)
+.+.+.+++||+||+.|++.|||+|||||||+|||+||+.+||+||+|||||||||||| ||+|+|+ .|||+|+
T Consensus 400 ~~l~~~~~gwR~vv~~A~~~GIP~Pafs~ALsfyDgYrta~LPaNL~QAQRDYFGAHTYr~lPeeR~D~prGEfFHT~W~ 479 (480)
T TIGR00873 400 DALKDAQSGWRRVVAKAIELGIPVPAFSAALSFYDGYRTARLPANLLQAQRDYFGAHTYRVLPEERTDKPRGEFFHTNWT 479 (480)
T ss_pred HHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCC
T ss_conf 99986215188999999853023578999999987665510157778675432012201116543678998854035778
Q ss_pred C
Q ss_conf 3
Q gi|254780716|r 470 K 470 (475)
Q Consensus 470 ~ 470 (475)
+
T Consensus 480 ~ 480 (480)
T TIGR00873 480 G 480 (480)
T ss_pred C
T ss_conf 9
No 2
>PTZ00142 6-phosphogluconate dehydrogenase; Provisional
Probab=100.00 E-value=0 Score=1219.07 Aligned_cols=468 Identities=41% Similarity=0.736 Sum_probs=453.0
Q ss_pred CCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHH
Q ss_conf 98805698157111688999997898599973998999999971221127840328989998605778899997699069
Q gi|254780716|r 2 KQADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDP 81 (475)
Q Consensus 2 ~k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~ 81 (475)
.|++|||||||+||.+||+||+++||+|+||||+++++++++++.+.....+.++.+++||++++++||+|++|||+|++
T Consensus 4 ~~~~IGiIGLGvMG~nmA~Nl~~~G~~V~vynrt~~k~~~~~~~~~~~~~~i~~~~sl~e~v~sl~~pr~Iilmv~aG~~ 83 (474)
T PTZ00142 4 GESDIGLIGLAVMGQNLSLNMYSRGFKVSVYNRTTEKVEEFMKKAKEGNKFVKGYHSLEELVNSLKRPRRVMLLIKAGEA 83 (474)
T ss_pred CCCCEEEEEEHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCHH
T ss_conf 76746687363867999999997898799977987999999985322467764667899999737999989998269825
Q ss_pred HHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHH
Q ss_conf 99999999720789989996798657899999999984799430675467600035684378845489998889999987
Q gi|254780716|r 82 VDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGVKGARSGASLMVGGNEKAYNRVENILLSI 161 (475)
Q Consensus 82 v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~~gA~~G~slMvGG~~~~~~~~~piL~~i 161 (475)
||+|+++|+|+|++||||||+||++|+||+||+++|+++||+|+|||||||++||++||||||||++++|++++|+|+++
T Consensus 84 Vd~vi~~L~~~L~~GDIIID~GNs~~~dt~rr~~~l~~kgI~fld~GVSGGe~GAr~GpsiMvGG~~~a~~~v~Pileai 163 (474)
T PTZ00142 84 VDEFIDNILPHLEKGDIIIDGGNEWYNNSERRIKLCKEKGILYIGMGVSGGEEGARYGPSLMPGGNPYAYDHVKDIFQAC 163 (474)
T ss_pred HHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHCCCEECCCCCHHHHHHHHHHHHHH
T ss_conf 99999999850889998987998886579999999985799186478884357773398213588688999876899997
Q ss_pred HCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
Q ss_conf 50156786189856987467898877678788899989999999964289978999999860688443079999999997
Q gi|254780716|r 162 SAKYQNSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKNPLEISHLFSKWDTGKLSSYLIKITAEILS 241 (475)
Q Consensus 162 aak~~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~~i~~vf~~w~~~~~~syLl~i~~~il~ 241 (475)
|+|++++|||.|+||.||||||||||||||||+||+|||+|++||++++++++++++||+.||+++++|||||||++||+
T Consensus 164 aak~~~~~c~~~~G~~GaGH~vKMVHNGIEY~~mq~iaE~y~il~~~~~~~~~~i~~vf~~Wn~g~l~syLieIt~~il~ 243 (474)
T PTZ00142 164 SAKVGDSPCCDYVGPGSSGHYVKMVHNGIEYGDMQLISEAYKLMKHILGMSNLELSEVFNKWNEGILDSYLIEITADILA 243 (474)
T ss_pred HCCCCCCCCEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 16169998710368987103100103540389999999999999873599989999999998376534799999999997
Q ss_pred HC-CCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC--CCCCCHHH
Q ss_conf 40-5679995200102333658716778988775178885146777888775005779998752487766--66452788
Q gi|254780716|r 242 SS-DTITGMPIIDVICDKASQKGTGIRSIIEGHKLSSSMTITETAIFARNLSLYRDESKKMQSFFNPSSH--FPLKCFDS 318 (475)
Q Consensus 242 ~k-~~~~g~~lid~i~d~~~~kgTg~Wt~~~a~~lgvp~p~i~~av~aR~~S~~k~~R~~~~~~~~~~~~--~~~~~~~~ 318 (475)
+| |+.+|.|+||+|+|+|+|||||+||+++|+++|||+|+|++||+||++|++|++|++++++++.+.. ....+.+.
T Consensus 244 ~~~~~~~~~~~ld~I~d~a~~kGTG~Wt~~~al~lgvp~p~i~~av~aR~lS~~k~~R~~~s~~~~~~~~~~~~~~~~~~ 323 (474)
T PTZ00142 244 KKKDELPNNHLVDKILDIAGQKGTGKWTAIEALDRGIPVPLIAESVDARCISALKEERVKASTHLTGPEANKKFTGDKEK 323 (474)
T ss_pred HCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHH
T ss_conf 52368789824132005556887369899999980999279999999999753599999999743899754556555888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf 99999999999999999999999996110145667988999985189468537899999998708885200079899999
Q gi|254780716|r 319 FVKDLENALYASTILSFTQGFWVIGKSSEKYSWSLSLATIARIWRAGCIIRSQILNDIVKSLTEDPSSTNLLNIPSISEK 398 (475)
Q Consensus 319 ~i~~L~~a~~~~~i~syaQGf~ll~~as~~y~w~l~l~~ia~iW~~GCIIrs~lL~~i~~~~~~~~~l~~Ll~~~~~~~~ 398 (475)
++++|++|+|||+||+|+|||+||+++|++|+|++|+++|+++||+||||||.||++|.++|+++|++.|||+++.|.+.
T Consensus 324 ~~~~l~~Aly~s~i~syaQGf~li~~as~~~~W~l~l~~ia~iWr~GCIIrs~lL~~i~~a~~~~~~l~nLl~~~~f~~~ 403 (474)
T PTZ00142 324 FEEDLLQALYACKIISYAQGFFLMKEASKEFGWNLNLGEIALIWRGGCIIRSVFLGEISNAFKKNPQLDNLFLDPKFADV 403 (474)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHCCCCCHHHHCCHHHHHH
T ss_conf 99999999999999999999999999989850488889999987458763379899999998639981111137999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCC
Q ss_conf 99524769999999998399847999999999862178875899998761045732242489876356566
Q gi|254780716|r 399 VKKTIPSLRRIVVTCTENGYPVPSLSAALSYFDTFIHDRGTANLIQAQRDFFGSHGFDRKDKISEPHGPWQ 469 (475)
Q Consensus 399 i~~~~~~lr~vv~~~i~~gip~P~lsssL~y~~~~~~~~~~~nliqaqRD~FGaH~~~r~D~~g~~H~~W~ 469 (475)
+++++++||+||..|+++|||+|++||||+|||++|++++|+|||||||||||+|||||+|++|.||++|+
T Consensus 404 l~~~~~~lR~vV~~a~~~gIp~PalssaL~Y~d~~~~~~lpanLIQAQRD~FGaHty~R~D~~g~fH~~Ws 474 (474)
T PTZ00142 404 LKNKQPSWRKVVSMATLNGIPTPAFSASLAYYQMYRSQNLPANLVQAQRDYFGAHTYQRLDDPGNYHTNWT 474 (474)
T ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCC
T ss_conf 99988999999999997599778999999999996368865999999987424677144899998599999
No 3
>COG0362 Gnd 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=0 Score=1224.68 Aligned_cols=473 Identities=47% Similarity=0.806 Sum_probs=462.8
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHH
Q ss_conf 99880569815711168899999789859997399899999997122112784032898999860577889999769906
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGD 80 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~ 80 (475)
|++.+||+||||+||+|+|+|++++||+|+||||+++|+++|+++.+ ..+++.++.|++|||+++++||.|++||.+|.
T Consensus 1 ~~~~~iGviGLaVMG~NLaLNi~~~G~~VavyNRt~~ktd~f~~~~~-~~k~i~~~~sieefV~~Le~PRkI~lMVkAG~ 79 (473)
T COG0362 1 MMKADIGVIGLAVMGSNLALNIADHGYTVAVYNRTTEKTDEFLAERA-KGKNIVPAYSIEEFVASLEKPRKILLMVKAGT 79 (473)
T ss_pred CCCCCCCEEEHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCC-CCCCCCCCCCHHHHHHHHCCCCEEEEEEECCC
T ss_conf 98661005731030277888887449669998087788999998275-68864566859999987158846999982699
Q ss_pred HHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHH
Q ss_conf 99999999972078998999679865789999999998479943067546760003568437884548999888999998
Q gi|254780716|r 81 PVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGVKGARSGASLMVGGNEKAYNRVENILLS 160 (475)
Q Consensus 81 ~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~~gA~~G~slMvGG~~~~~~~~~piL~~ 160 (475)
+||+++++|+|+|++|||+||+||++|+||+||.++|+++|++|+++|||||++||++|||+|+||++++|+.++|+|++
T Consensus 80 ~VD~~I~~L~p~Le~gDIiIDGGNs~y~DT~RR~~eL~~~Gi~FvG~GVSGGEeGA~~GPSiMpGG~~eay~~v~pil~~ 159 (473)
T COG0362 80 PVDAVIEQLLPLLEKGDIIIDGGNSHYKDTIRRNKELSEKGILFVGMGVSGGEEGARHGPSIMPGGQKEAYELVAPILTK 159 (473)
T ss_pred CHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 27899999875257889898688767820789999988638848951666652100249876999998899999999999
Q ss_pred HHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf 75015678618985698746789887767878889998999999996428997899999986068844307999999999
Q gi|254780716|r 161 ISAKYQNSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKNPLEISHLFSKWDTGKLSSYLIKITAEIL 240 (475)
Q Consensus 161 iaak~~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~~i~~vf~~w~~~~~~syLl~i~~~il 240 (475)
||||++++|||.|+||.|+||||||||||||||+||+|||+|.+||++++++++||++||++||+++|+|||+|||++||
T Consensus 160 IaAk~~g~pCc~~iG~~GAGHfVKmVHNGIEYgDMQlIaE~Y~ilk~~lgls~~ei~~vF~~WN~geL~SYLIeIT~~IL 239 (473)
T COG0362 160 IAAKVDGEPCCTWIGPDGAGHFVKMVHNGIEYGDMQLIAEAYDILKDGLGLSAEEIAEVFEEWNKGELDSYLIEITADIL 239 (473)
T ss_pred HHHHCCCCCCEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_conf 87533999852537899977522101457148889999999999997549998999999998626760479999999998
Q ss_pred HHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
Q ss_conf 74056799952001023336587167789887751788851467778887750057799987524877666645278899
Q gi|254780716|r 241 SSSDTITGMPIIDVICDKASQKGTGIRSIIEGHKLSSSMTITETAIFARNLSLYRDESKKMQSFFNPSSHFPLKCFDSFV 320 (475)
Q Consensus 241 ~~k~~~~g~~lid~i~d~~~~kgTg~Wt~~~a~~lgvp~p~i~~av~aR~~S~~k~~R~~~~~~~~~~~~~~~~~~~~~i 320 (475)
++||++++.||+|+|+|+|+|||||+||+++|+++|+|+|.|.+||+||++|+.|++|+.+++.++.++.....+++.|+
T Consensus 240 ~~kD~~~~kplvd~ILD~AgQKGTGkWt~~~AldlGvP~t~I~eaVfAR~lSs~K~eR~~Ask~l~~~~~~~~~dk~~fi 319 (473)
T COG0362 240 RKKDEEGGKPLVDKILDKAGQKGTGKWTVISALDLGVPLTLITEAVFARYLSSLKDERVAASKVLAGPKLGEPGDKEEFI 319 (473)
T ss_pred HHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
T ss_conf 64086668736999988734787654139879971998089999999999987589999998642899888887889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Q ss_conf 99999999999999999999999611014566798899998518946853789999999870888520007989999999
Q gi|254780716|r 321 KDLENALYASTILSFTQGFWVIGKSSEKYSWSLSLATIARIWRAGCIIRSQILNDIVKSLTEDPSSTNLLNIPSISEKVK 400 (475)
Q Consensus 321 ~~L~~a~~~~~i~syaQGf~ll~~as~~y~w~l~l~~ia~iW~~GCIIrs~lL~~i~~~~~~~~~l~~Ll~~~~~~~~i~ 400 (475)
++|++|+|+++|+||||||.+|++||++|+|++++++|+++||+||||||.||+.|.++|.++|++.||+++|+|.+.+.
T Consensus 320 ~~vr~ALy~sKI~sYAQGF~~l~~AS~e~gW~l~~~~iA~iWR~GCIIRs~FL~~I~~af~~~p~l~nLl~~pyF~~~~~ 399 (473)
T COG0362 320 EDVRQALYASKIVSYAQGFALLRAASKEYGWDLNLGEIALIWRGGCIIRSKFLDKITDAFDENPELANLLLAPYFKSILE 399 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHH
T ss_conf 99999999999999999999999999973999987899999826633429999999999863953354533799999999
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCC
Q ss_conf 52476999999999839984799999999986217887589999876104573224248987635656635456
Q gi|254780716|r 401 KTIPSLRRIVVTCTENGYPVPSLSAALSYFDTFIHDRGTANLIQAQRDFFGSHGFDRKDKISEPHGPWQKVSTE 474 (475)
Q Consensus 401 ~~~~~lr~vv~~~i~~gip~P~lsssL~y~~~~~~~~~~~nliqaqRD~FGaH~~~r~D~~g~~H~~W~~~~~~ 474 (475)
+.+++||++|+.+++.|||+|++||||+|||+||+.++|+|||||||||||||||+|+|++|.||++|++.+.+
T Consensus 400 ~~~~~~R~vV~~a~~~giP~P~~ssalsy~Dsyr~~~lpaNLiQAQRDyFGAHtyeR~D~~~~fHt~W~~~~~~ 473 (473)
T COG0362 400 EYQQSLRRVVAYAVEAGIPVPAFSSALSYYDSYRTARLPANLIQAQRDYFGAHTYERTDKEGFFHTNWTGGGGN 473 (473)
T ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCC
T ss_conf 88889999999998649983478989999887533236389999988761334313358887623576577899
No 4
>PRK09287 6-phosphogluconate dehydrogenase; Validated
Probab=100.00 E-value=0 Score=1201.32 Aligned_cols=458 Identities=47% Similarity=0.790 Sum_probs=447.4
Q ss_pred HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCC
Q ss_conf 11688999997898599973998999999971221127840328989998605778899997699069999999997207
Q gi|254780716|r 14 MGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQLIDKLKPLL 93 (475)
Q Consensus 14 MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi~~l~~~l 93 (475)
||.|||+||+++||+|+||||+++++++++++++ ...++.++.+++||++++++||+|++|||+|++||+|+++|+|.|
T Consensus 1 MG~nlAlNl~~~G~~V~vynRt~~k~~~~~~~~~-~~~~~~~~~~l~e~v~sl~~PR~IilmV~aG~~vD~vI~~L~~~L 79 (459)
T PRK09287 1 MGKNLALNIASNGYTVAVYNRTPEKTDEFLAEEA-KGKKIVPAYTLEEFVASLEKPRKILLMVKAGAPVDAVIEQLLPLL 79 (459)
T ss_pred CCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCC-CCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHC
T ss_conf 9689999999789858997398899999998148-767850358999999736788879998168842999999998508
Q ss_pred CCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCC-CCCEEE
Q ss_conf 8998999679865789999999998479943067546760003568437884548999888999998750156-786189
Q gi|254780716|r 94 SPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGVKGARSGASLMVGGNEKAYNRVENILLSISAKYQ-NSPCCA 172 (475)
Q Consensus 94 ~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~~gA~~G~slMvGG~~~~~~~~~piL~~iaak~~-~~~cv~ 172 (475)
++||||||+||++|+||+||.++|+++||+|+|||||||++||++||||||||++++|++++|+|+++|+|++ +.|||.
T Consensus 80 ~~gDIiIDgGNS~y~dT~rR~~~l~~kgI~Flg~GVSGGe~GAr~GpSiM~GG~~~a~~~v~pile~iaak~~~g~pC~~ 159 (459)
T PRK09287 80 EKGDIIIDGGNSNYTDTIRREKELAEKGIHFIGMGVSGGEEGALHGPSIMPGGQKEAYELVAPILEKIAAKVEDGEPCVT 159 (459)
T ss_pred CCCCEEEECCCCCHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEE
T ss_conf 89998987999764337999999997599064578888745675397216789888999999999997520589997415
Q ss_pred EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCH
Q ss_conf 85698746789887767878889998999999996428997899999986068844307999999999740567999520
Q gi|254780716|r 173 LLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKNPLEISHLFSKWDTGKLSSYLIKITAEILSSSDTITGMPII 252 (475)
Q Consensus 173 y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~~i~~vf~~w~~~~~~syLl~i~~~il~~k~~~~g~~li 252 (475)
|+||.||||||||||||||||+||+|||+|++||++++++++||++||++||+++++|||||||++||++||+++|.|+|
T Consensus 160 ~~G~~gaGHfvKMVHNGIEY~~MQ~iaE~y~~lk~~~~~~~~ei~~vF~~wn~g~l~SyLieIT~~il~~kd~~~g~~lv 239 (459)
T PRK09287 160 YIGPDGAGHYVKMVHNGIEYGDMQLIAEAYDLLKDGLGLSAEEIADVFAEWNKGELNSYLIEITADILRQKDEETGKPLV 239 (459)
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCH
T ss_conf 58999852288998701557889999999999987418998999999999846862269999999999851777798352
Q ss_pred HHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 01023336587167789887751788851467778887750057799987524877666645278899999999999999
Q gi|254780716|r 253 DVICDKASQKGTGIRSIIEGHKLSSSMTITETAIFARNLSLYRDESKKMQSFFNPSSHFPLKCFDSFVKDLENALYASTI 332 (475)
Q Consensus 253 d~i~d~~~~kgTg~Wt~~~a~~lgvp~p~i~~av~aR~~S~~k~~R~~~~~~~~~~~~~~~~~~~~~i~~L~~a~~~~~i 332 (475)
|+|+|+|+|||||+||+++|+++|||+|+|++||+||++|++|++|++++++++.+......+.+.++++|++|+|||+|
T Consensus 240 d~I~D~a~qkGTG~Wt~~~al~lgvp~p~I~~Av~aR~~S~~k~~R~~~~~~~~~~~~~~~~~~~~~i~~l~~Aly~ski 319 (459)
T PRK09287 240 DVILDKAGQKGTGKWTSQSALDLGVPLTLITEAVFARYLSSLKDQRVAASKLLSGPVAPFEGDKAEFIEDLRQALYASKI 319 (459)
T ss_pred HHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 33125445787168799999980999289999999999853489999998643899765556788999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999611014566798899998518946853789999999870888520007989999999524769999999
Q gi|254780716|r 333 LSFTQGFWVIGKSSEKYSWSLSLATIARIWRAGCIIRSQILNDIVKSLTEDPSSTNLLNIPSISEKVKKTIPSLRRIVVT 412 (475)
Q Consensus 333 ~syaQGf~ll~~as~~y~w~l~l~~ia~iW~~GCIIrs~lL~~i~~~~~~~~~l~~Ll~~~~~~~~i~~~~~~lr~vv~~ 412 (475)
|||+|||+||+++|++|+|++|+++|+++||+||||||.||++|.++|+++|++.|||+++.|.+.+++++++||+||..
T Consensus 320 ~sYaQGf~li~~as~~~~W~l~l~~ia~iWr~GCIIRs~~L~~i~~af~~~~~l~nLl~~~~f~~~l~~~~~~lR~vV~~ 399 (459)
T PRK09287 320 VSYAQGFALLRAASEEYGWDLNLGEIARIWRGGCIIRAQFLQKITDAYEKNPDLANLLLDPYFKDILKEYQDALRRVVAT 399 (459)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999985568888999998606877538889999999961998411013799999999988999999999
Q ss_pred HHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCC
Q ss_conf 998399847999999999862178875899998761045732242489876356566354
Q gi|254780716|r 413 CTENGYPVPSLSAALSYFDTFIHDRGTANLIQAQRDFFGSHGFDRKDKISEPHGPWQKVS 472 (475)
Q Consensus 413 ~i~~gip~P~lsssL~y~~~~~~~~~~~nliqaqRD~FGaH~~~r~D~~g~~H~~W~~~~ 472 (475)
|+++|||+|+|||||+|||++|++++|+|||||||||||+|||+|+|++|.||++|++++
T Consensus 400 ai~~gip~PalssaL~Y~d~~r~~~lpanLIQAQRDyFGaHty~r~D~~g~fH~~W~~~~ 459 (459)
T PRK09287 400 AVEAGIPVPAFSSALSYYDSYRTARLPANLIQAQRDYFGAHTYERTDKEGGFHTEWSEEG 459 (459)
T ss_pred HHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCC
T ss_conf 997599778999999999986168875999999998624677256899998178899997
No 5
>KOG2653 consensus
Probab=100.00 E-value=0 Score=1114.28 Aligned_cols=472 Identities=42% Similarity=0.740 Sum_probs=455.2
Q ss_pred CCC---CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECC
Q ss_conf 998---80569815711168899999789859997399899999997122112784032898999860577889999769
Q gi|254780716|r 1 MKQ---ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVT 77 (475)
Q Consensus 1 M~k---~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp 77 (475)
|.+ .+||+|||++||+|+++|++++||.|.+|||+.+|+++|+++.++ ..++.++.|++|||.++++||+|+++|.
T Consensus 1 m~q~~~~digLiGLaVMGqnLiLN~~d~Gf~v~~yNRT~skvD~flaneak-~~~i~ga~S~ed~v~klk~PR~iillvk 79 (487)
T KOG2653 1 MSQTPKADIGLIGLAVMGQNLILNIADKGFTVCAYNRTTSKVDEFLANEAK-GTKIIGAYSLEDFVSKLKKPRVIILLVK 79 (487)
T ss_pred CCCCCCCCEEEHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHC-CCCCCCCCCHHHHHHHCCCCCEEEEEEE
T ss_conf 997764410001166502455200104683589864614768899986524-9812586888999976378748999960
Q ss_pred CHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEECCHHHHHHHHHH
Q ss_conf 90699999999972078998999679865789999999998479943067546760003568437884548999888999
Q gi|254780716|r 78 DGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGVKGARSGASLMVGGNEKAYNRVENI 157 (475)
Q Consensus 78 ~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~~gA~~G~slMvGG~~~~~~~~~pi 157 (475)
+|++||..+++|.|+|++||||||+||++|+||.||.++++++|+-|++||||||++|||.|||+|+||++++|..+++|
T Consensus 80 AG~pVD~~I~~L~p~LekgDiIIDGGNs~y~dT~RR~~el~k~GilfvG~GVSGGEEGAR~GPSlMpGg~~~Awp~ik~i 159 (487)
T KOG2653 80 AGAPVDQFIEELVPYLEKGDIIIDGGNSEYQDTERRCRELAKKGILFVGSGVSGGEEGARYGPSLMPGGSKEAWPHIKDI 159 (487)
T ss_pred CCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 79818999999986447898898488654764378899999668569844766764222248866889896787878999
Q ss_pred HHHHHCCC-CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHH
Q ss_conf 99875015-67861898569874678988776787888999899999999642899789999998606884430799999
Q gi|254780716|r 158 LLSISAKY-QNSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKNPLEISHLFSKWDTGKLSSYLIKIT 236 (475)
Q Consensus 158 L~~iaak~-~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~~i~~vf~~w~~~~~~syLl~i~ 236 (475)
|+.+|+++ +++|||.|+|+.||||||||||||||||+||+|||+|++||+.++++++||+++|++||++++.|||+|||
T Consensus 160 fq~iaakv~~~epCc~wvG~~GaGhfVKMVHNGIEYGDMqLI~EaY~vlk~~~gls~~eia~vF~~WN~geleSfLieIT 239 (487)
T KOG2653 160 FQKIAAKVSDGEPCCDWVGEGGAGHFVKMVHNGIEYGDMQLICEAYDVLKSVLGLSNDEIAEVFDDWNKGELESFLIEIT 239 (487)
T ss_pred HHHHHHHHCCCCCCEEEECCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 99998885399988354468887630145326743113899999999999845866788999997643331668999986
Q ss_pred HHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--CC
Q ss_conf 9999740567999520010233365871677898877517888514677788877500577999875248776666--45
Q gi|254780716|r 237 AEILSSSDTITGMPIIDVICDKASQKGTGIRSIIEGHKLSSSMTITETAIFARNLSLYRDESKKMQSFFNPSSHFP--LK 314 (475)
Q Consensus 237 ~~il~~k~~~~g~~lid~i~d~~~~kgTg~Wt~~~a~~lgvp~p~i~~av~aR~~S~~k~~R~~~~~~~~~~~~~~--~~ 314 (475)
++||+.+|+ .|.||+|+|.|+++|||||+||++.|+|+|+|+|.|.+||++|++|..|++|+.+++.++.+.... ..
T Consensus 240 ~dIlk~~d~-~G~~lv~kI~D~aGqKGTGkwt~~~Ale~g~Pv~lI~eavfaRclS~lKdeR~~ask~L~gp~~~~~~~~ 318 (487)
T KOG2653 240 ADILKFKDE-DGKPLVDKILDKAGQKGTGKWTVISALELGVPVTLIGEAVFARCLSALKDERVRASKVLKGPGVKRDMGD 318 (487)
T ss_pred HHHHCEECC-CCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
T ss_conf 887600056-7871689998641687762899998998189717999999999998877888889875569997544455
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCCCCCCHH
Q ss_conf 27889999999999999999999999999611014566798899998518946853789999999870888520007989
Q gi|254780716|r 315 CFDSFVKDLENALYASTILSFTQGFWVIGKSSEKYSWSLSLATIARIWRAGCIIRSQILNDIVKSLTEDPSSTNLLNIPS 394 (475)
Q Consensus 315 ~~~~~i~~L~~a~~~~~i~syaQGf~ll~~as~~y~w~l~l~~ia~iW~~GCIIrs~lL~~i~~~~~~~~~l~~Ll~~~~ 394 (475)
++..|++++++|+|+++||||+|||+||++++++|+|++|+++|+++||+||||||.||+.|.++|.++|+|+||+++++
T Consensus 319 ~k~~~~dd~r~alYaskiiSyaQGfmLlr~aa~e~gW~ln~~~iAlmWrgGCIIRsvfL~~I~~a~~~~p~l~nll~d~f 398 (487)
T KOG2653 319 DKKQFLDDIRQALYASKIISYAQGFMLLREAAKEKGWKLNNGGIALMWRGGCIIRSVFLDRIKKAYQRNPDLANLLLDPF 398 (487)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCHHHHCCCHH
T ss_conf 68999999999999999999998899999999971998771689999738807627889999998752942664106889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEECCCCC-CCCCCCCCCCC
Q ss_conf 99999952476999999999839984799999999986217887589999876104573224248987-63565663545
Q gi|254780716|r 395 ISEKVKKTIPSLRRIVVTCTENGYPVPSLSAALSYFDTFIHDRGTANLIQAQRDFFGSHGFDRKDKIS-EPHGPWQKVST 473 (475)
Q Consensus 395 ~~~~i~~~~~~lr~vv~~~i~~gip~P~lsssL~y~~~~~~~~~~~nliqaqRD~FGaH~~~r~D~~g-~~H~~W~~~~~ 473 (475)
|.+.+.+.+.+||++|..++..|||+|++|+||+|||+||++++|+||+||||||||||||++++++| .+|++|++.+.
T Consensus 399 F~~~v~~~q~~wr~vV~~a~~~gIptP~~st~Lafydgyr~e~lpaNllQAqRDYFGAHtye~l~~~~~~~HtnWtg~gg 478 (487)
T KOG2653 399 FAKAVEEAQDSWRRVVALAVEAGIPTPAFSTALAFYDGYRSERLPANLLQAQRDYFGAHTYELLGEPGKAIHTNWTGHGG 478 (487)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCC
T ss_conf 99999999999999999998518897057778998710123017477999988862301266537776435532105577
Q ss_pred C
Q ss_conf 6
Q gi|254780716|r 474 E 474 (475)
Q Consensus 474 ~ 474 (475)
.
T Consensus 479 ~ 479 (487)
T KOG2653 479 N 479 (487)
T ss_pred C
T ss_conf 6
No 6
>pfam00393 6PGD 6-phosphogluconate dehydrogenase, C-terminal domain. This family represents the C-terminal all-alpha domain of 6-phosphogluconate dehydrogenase. The domain contains two structural repeats of 5 helices each.
Probab=100.00 E-value=0 Score=790.37 Aligned_cols=289 Identities=43% Similarity=0.757 Sum_probs=280.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCC
Q ss_conf 67898877678788899989999999964289978999999860688443079999999997405679995200102333
Q gi|254780716|r 180 GHFVKMIHNGIEYANMQLIADIYGILRDSLNKNPLEISHLFSKWDTGKLSSYLIKITAEILSSSDTITGMPIIDVICDKA 259 (475)
Q Consensus 180 Gh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~~i~~vf~~w~~~~~~syLl~i~~~il~~k~~~~g~~lid~i~d~~ 259 (475)
||||||||||||||+||+|||+|++||++++++++||++||++||+|+++|||||||++||++||+ +|.|++|+|+|+|
T Consensus 1 GH~vKMvHNgIEY~~mq~iaE~y~~l~~~~~~~~~~i~~vf~~wn~g~l~syLieit~~il~~kd~-~~~~~~d~I~D~A 79 (290)
T pfam00393 1 GHYVKMVHNGIEYGDMQLIAEAYDLLKTVLGLSNDEIADVFEEWNKGELDSYLIEITADILRKKDE-DGKPLVDKILDKA 79 (290)
T ss_pred CCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC-CCCCCHHHHCCCC
T ss_conf 985161115098999999999999999853999999999999980786330799999999985488-9990425541543
Q ss_pred CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 65871677898877517888514677788877500577999875248776-66645278899999999999999999999
Q gi|254780716|r 260 SQKGTGIRSIIEGHKLSSSMTITETAIFARNLSLYRDESKKMQSFFNPSS-HFPLKCFDSFVKDLENALYASTILSFTQG 338 (475)
Q Consensus 260 ~~kgTg~Wt~~~a~~lgvp~p~i~~av~aR~~S~~k~~R~~~~~~~~~~~-~~~~~~~~~~i~~L~~a~~~~~i~syaQG 338 (475)
+|||||+||+++|+++|||+|+|++||+||++|++|++|+++++.++.+. .....+.+.++++|++|+||+++|||+||
T Consensus 80 ~qKGTG~Wt~~~al~lgvp~p~i~~Av~aR~lS~~k~~R~~~s~~~~~~~~~~~~~~~~~~i~~L~~Aly~s~i~syaQG 159 (290)
T pfam00393 80 GQKGTGKWTVQSALELGVPVPLITEAVFARYLSSLKEERVAASKVLSGPKAAKDKGDKAEFIEDVRQALYASKIVSYAQG 159 (290)
T ss_pred CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 57884688999999809992799999999998612277789888628996455654378999999999999999999999
Q ss_pred HHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99999611014566798899998518946853789999999870888520007989999999524769999999998399
Q gi|254780716|r 339 FWVIGKSSEKYSWSLSLATIARIWRAGCIIRSQILNDIVKSLTEDPSSTNLLNIPSISEKVKKTIPSLRRIVVTCTENGY 418 (475)
Q Consensus 339 f~ll~~as~~y~w~l~l~~ia~iW~~GCIIrs~lL~~i~~~~~~~~~l~~Ll~~~~~~~~i~~~~~~lr~vv~~~i~~gi 418 (475)
|+||+++|++|+|++|+++|+++||+||||||.||++|.++|+++|++.|||+++.|.+.+++++++||+||..|+++||
T Consensus 160 f~li~~as~~~~W~lnl~~Ia~iWr~GCIIRs~lL~~i~~a~~~~~~l~nLl~~~~f~~~l~~~~~~lR~vV~~ai~~gi 239 (290)
T pfam00393 160 FMLLRAASKEYGWNLNLGEIARIWRGGCIIRAQFLDKIKDAYEKNPDLPNLLLDPYFKKEIKEYQQSWRRVVAIAVEAGI 239 (290)
T ss_pred HHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999982778888999998558866549989999999854997312013599999999999999999999998599
Q ss_pred CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCC
Q ss_conf 847999999999862178875899998761045732242489876356566
Q gi|254780716|r 419 PVPSLSAALSYFDTFIHDRGTANLIQAQRDFFGSHGFDRKDKISEPHGPWQ 469 (475)
Q Consensus 419 p~P~lsssL~y~~~~~~~~~~~nliqaqRD~FGaH~~~r~D~~g~~H~~W~ 469 (475)
|+|++||||+|||+++++++|+|||||||||||+|||||+|++|.||++|+
T Consensus 240 P~PalSsaL~Y~d~~~~~~lpanLIQAQRDyFGaHtyeR~D~~g~fH~~W~ 290 (290)
T pfam00393 240 PVPAFSSALSYYDSYRTERLPANLIQAQRDYFGAHTYERTDKEGFFHTNWT 290 (290)
T ss_pred CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCC
T ss_conf 838899999999985247883899999998722677257899988289999
No 7
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=100.00 E-value=0 Score=628.53 Aligned_cols=276 Identities=35% Similarity=0.607 Sum_probs=260.1
Q ss_pred EEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHH
Q ss_conf 05698157111688999997898599973998999999971221127840328989998605778899997699069999
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQ 84 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~ 84 (475)
+|||||||+||.+||+||+++||+|+||||++++++++.+++ ..++.+++|+++++++||+||+|||++++|++
T Consensus 2 kIGfIGLG~MG~~mA~nL~~~G~~V~v~dr~~~~~~~~~~~g------a~~~~s~~e~~~~~d~prvI~l~lp~~~~Vd~ 75 (301)
T PRK09599 2 QLGMIGLGRMGGNMARRLLRGGHEVVGYDRNPEAVEALAAEG------ATGAASLEELVAKLPAPRVVWLMVPAGEITDS 75 (301)
T ss_pred EEEEECHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCC------CEECCCHHHHHHHCCCCCEEEEECCCCHHHHH
T ss_conf 799983458799999999968990799769999999999859------94329999999707888779998179703899
Q ss_pred HHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCC
Q ss_conf 99999720789989996798657899999999984799430675467600035684378845489998889999987501
Q gi|254780716|r 85 LIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGVKGARSGASLMVGGNEKAYNRVENILLSISAK 164 (475)
Q Consensus 85 vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~~gA~~G~slMvGG~~~~~~~~~piL~~iaak 164 (475)
|++++.+.|++|+||||+||++|++|++++++++++|++|+|||||||+.||++|+++||||++++|++++|+|++||++
T Consensus 76 Vi~~l~~~l~~g~iiID~sts~~~~t~~~a~~l~~~gi~flDapVSGG~~gA~~GlsiMvGG~~~~~e~~~Pil~aia~~ 155 (301)
T PRK09599 76 TIDELAPLLEAGDIVIDGGNSYYKDDIRRAELLAEKGIHFVDVGTSGGVWGLERGYCLMIGGDKEAVERLEPIFKALAPR 155 (301)
T ss_pred HHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCC
T ss_conf 99999962789988870899983889999999998599454476678877885586133069899999989999998334
Q ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC-CCHHHHHHHHHHHHHC
Q ss_conf 567861898569874678988776787888999899999999642899789999998606884-4307999999999740
Q gi|254780716|r 165 YQNSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKNPLEISHLFSKWDTGK-LSSYLIKITAEILSSS 243 (475)
Q Consensus 165 ~~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~~i~~vf~~w~~~~-~~syLl~i~~~il~~k 243 (475)
+. +|+.|+||.|||||||||||||||++||+|||+|++|++. +++. ++.+||+.||+|+ ++|||+|||+++|+++
T Consensus 156 ~~--~~~~~~G~~GaGh~vKmVhNgIey~~mq~iaE~~~ll~~~-~~~~-d~~~v~~~w~~g~~~~S~L~ei~~~~l~~~ 231 (301)
T PRK09599 156 AE--DGYLHAGPVGAGHFVKMVHNGIEYGMMQAYAEGFELLEAS-RFDL-DLAAVAEVWRRGSVIRSWLLDLTADALAED 231 (301)
T ss_pred CC--CCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCC-CHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
T ss_conf 57--7804578988238999999999999999999999999866-7887-899999998568821138999999997118
Q ss_pred CCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 56799952001023336587167789887751788851467778887750057
Q gi|254780716|r 244 DTITGMPIIDVICDKASQKGTGIRSIIEGHKLSSSMTITETAIFARNLSLYRD 296 (475)
Q Consensus 244 ~~~~g~~lid~i~d~~~~kgTg~Wt~~~a~~lgvp~p~i~~av~aR~~S~~k~ 296 (475)
+.+|.|.|++++||||+||+++|+++|||+|+|++||++|+.|..++
T Consensus 232 ------~~ld~i~~~~~~~gtG~wt~~~a~~lgvp~p~i~~a~~aR~~S~~~~ 278 (301)
T PRK09599 232 ------PKLDEISGYVADSGEGRWTVEAAIELGVPAPVIAAALFARFRSRQED 278 (301)
T ss_pred ------CCHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
T ss_conf ------85422146126787189999999985998589999999999846676
No 8
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=100.00 E-value=0 Score=606.35 Aligned_cols=275 Identities=34% Similarity=0.608 Sum_probs=259.1
Q ss_pred EEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHH
Q ss_conf 05698157111688999997898599973998999999971221127840328989998605778899997699069999
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQ 84 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~ 84 (475)
+|||||||+||.+||+||+++||+|++|||++++++.+.+.+ +.++.+++|++++++.||+||+|||++++|++
T Consensus 2 kIGfIGLG~MG~~mA~nL~~~G~~V~v~d~~~~~~~~~~~~g------~~~~~s~~e~~~~l~~~~vI~~~vp~g~~v~~ 75 (298)
T PRK12490 2 KLGLIGLGKMGGNMAERLREDGHEVVGYDVNQEAVDVAGKLG------ITARHSLEELVSKLEAPRAIWVMVPAGEVTES 75 (298)
T ss_pred EEEEECHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCC------CEECCCHHHHHHHCCCCCEEEEECCCCHHHHH
T ss_conf 799983467689999999977994899849989999999869------95428999999737899889997689455999
Q ss_pred HHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCC
Q ss_conf 99999720789989996798657899999999984799430675467600035684378845489998889999987501
Q gi|254780716|r 85 LIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGVKGARSGASLMVGGNEKAYNRVENILLSISAK 164 (475)
Q Consensus 85 vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~~gA~~G~slMvGG~~~~~~~~~piL~~iaak 164 (475)
|++++.+.|++|++|||+||++|+++++++++++++|++|+|||||||+.||++|+|+|+||++++|++++|+|++|+++
T Consensus 76 vi~~l~~~L~~g~iiID~sts~~~~t~~~~~~l~~~gi~flDapVSGG~~GA~~GlsiMvGG~~~~~~~~~pil~~ia~~ 155 (298)
T PRK12490 76 VLKDLYPLLSPGDIVIDGGNSRYKDDLRRAEELAERGIHYVDCGTSGGVWGLRNGYCLMVGGDKEIYDRLEPVFDALAPE 155 (298)
T ss_pred HHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHCCCEEECCCCHHHHHHHHHHHHHHCCC
T ss_conf 99968852699988852887899999999999997599030553578878996698685189999999999999996674
Q ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC-CCHHHHHHHHHHHHHC
Q ss_conf 567861898569874678988776787888999899999999642899789999998606884-4307999999999740
Q gi|254780716|r 165 YQNSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKNPLEISHLFSKWDTGK-LSSYLIKITAEILSSS 243 (475)
Q Consensus 165 ~~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~~i~~vf~~w~~~~-~~syLl~i~~~il~~k 243 (475)
.. +.|+||.|||||||||||+|||++||++||+|++|++. +++. ++.+||+.||+|. ++|||+|||+++|..
T Consensus 156 ~~----~~~~G~~GsGh~vKmvnN~Iey~~mq~iaEa~~l~~~~-~~~~-d~~~v~~~w~~G~~~~S~L~ei~~~~l~~- 228 (298)
T PRK12490 156 NG----YVHAGPVGSGHFLKMVHNGIEYGMMQAYAEGFELLDKS-DFDF-DVEDVARVWANGSVIRSWLLDLTVKALAE- 228 (298)
T ss_pred CC----CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCC-CHHHHHHHHHCCCHHHHHHHHHHHHHHCC-
T ss_conf 58----57208987538899999999999999999999999867-9988-89999999957762666999999998545-
Q ss_pred CCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 567999520010233365871677898877517888514677788877500577
Q gi|254780716|r 244 DTITGMPIIDVICDKASQKGTGIRSIIEGHKLSSSMTITETAIFARNLSLYRDE 297 (475)
Q Consensus 244 ~~~~g~~lid~i~d~~~~kgTg~Wt~~~a~~lgvp~p~i~~av~aR~~S~~k~~ 297 (475)
+|.+|.|+|.+++||||+||+++|+++|||+|+|++||++|+.|..++.
T Consensus 229 -----~~~l~~i~~~~~~~Gtg~wt~~~A~~lgvp~P~i~~Al~~R~~S~~~~~ 277 (298)
T PRK12490 229 -----DPKLSGIKGYMNDSGEGRWTVEEAIELAVAAPVIAASLFMRFASQEDDS 277 (298)
T ss_pred -----CCCHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC
T ss_conf -----9974332663368895199999999839991699999999998657886
No 9
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating); InterPro: IPR004849 This family resembles a larger family of bacterial and eukaryotic 6-phosphogluconate dehydrogenases (Gnd) but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain Gnd, and in Aquifex aeolicus. .
Probab=100.00 E-value=0 Score=599.50 Aligned_cols=322 Identities=33% Similarity=0.602 Sum_probs=286.7
Q ss_pred EEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 056981571116889999978985999739989999999-7122112784032898999860577889999769906999
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFI-KKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~-~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
+||+||||.||.|++++|.+.||+|++||++++.++++. +.. ...+.++.|+.+.|..||+||+|||++.+|+
T Consensus 3 tlglIGLGrMG~ni~~rl~~rgh~~vgYd~~q~av~~~kG~d~------~~gv~nl~E~~~~l~~Pr~vWvMVPhgnivd 76 (341)
T TIGR00872 3 TLGLIGLGRMGANIAKRLADRGHEVVGYDRDQAAVEELKGEDR------AEGVANLKELLKRLSAPRVVWVMVPHGNIVD 76 (341)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCC------CCCCHHHHHHHHCCCCCCEEEEECCCCHHHH
T ss_conf 2443133467899999985279469985388799999720113------4300124788841799958998628736799
Q ss_pred HHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHC
Q ss_conf 99999972078998999679865789999999998479943067546760003568437884548999888999998750
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGVKGARSGASLMVGGNEKAYNRVENILLSISA 163 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~~gA~~G~slMvGG~~~~~~~~~piL~~iaa 163 (475)
+|++.|.|.|++||+|||+|||+|+|++||+++++++||+|||||+|||..|+++|.|||+|||.|+|++++|+|+++|.
T Consensus 77 aVl~~l~p~L~kGD~vIdgGNsyYkds~Rry~~lke~gih~LD~GtSGG~~G~~~G~cfMiGGD~eaf~~~EplF~tvaP 156 (341)
T TIGR00872 77 AVLRELAPLLEKGDIVIDGGNSYYKDSLRRYKELKEKGIHYLDVGTSGGVLGKERGYCFMIGGDEEAFKKAEPLFKTVAP 156 (341)
T ss_pred HHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEECCCHHHHHHHCHHHHHCCC
T ss_conf 99997666764088898278651233478887688718756534545772304464147751847999762214432066
Q ss_pred CCC--------------CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHHHHHHHHHHCCCCCC
Q ss_conf 156--------------786189856987467898877678788899989999999964-28997899999986068844
Q gi|254780716|r 164 KYQ--------------NSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDS-LNKNPLEISHLFSKWDTGKL 228 (475)
Q Consensus 164 k~~--------------~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~-~~~~~~~i~~vf~~w~~~~~ 228 (475)
.+. .+..+.|+|++|||||+||||||||||||.+|||+|++|+++ .+ .+-++++.
T Consensus 157 GvaaaPrtPGrdGd~A~ee~GYly~G~~GsGHF~KMvHNGIEYG~MaaiaEGfe~L~nsdvG----------trvqhGda 226 (341)
T TIGR00872 157 GVAAAPRTPGRDGDVAVEEKGYLYLGEAGSGHFVKMVHNGIEYGMMAAIAEGFEVLKNSDVG----------TRVQHGDA 226 (341)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCC----------CCEECCCC
T ss_conf 52137888788776062567615545878766302222451388899998778987524655----------50003754
Q ss_pred CHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 30799999999974056799952001023336587167789887751788851467778887750057799987524877
Q gi|254780716|r 229 SSYLIKITAEILSSSDTITGMPIIDVICDKASQKGTGIRSIIEGHKLSSSMTITETAIFARNLSLYRDESKKMQSFFNPS 308 (475)
Q Consensus 229 ~syLl~i~~~il~~k~~~~g~~lid~i~d~~~~kgTg~Wt~~~a~~lgvp~p~i~~av~aR~~S~~k~~R~~~~~~~~~~ 308 (475)
++ .|.|
T Consensus 227 -----------------et-----------------------------aPlP---------------------------- 232 (341)
T TIGR00872 227 -----------------ET-----------------------------APLP---------------------------- 232 (341)
T ss_pred -----------------CC-----------------------------CCCC----------------------------
T ss_conf -----------------46-----------------------------7887----------------------------
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCC
Q ss_conf 66664527889999999999999999999999999611014566798899998518946853789999999870888520
Q gi|254780716|r 309 SHFPLKCFDSFVKDLENALYASTILSFTQGFWVIGKSSEKYSWSLSLATIARIWRAGCIIRSQILNDIVKSLTEDPSSTN 388 (475)
Q Consensus 309 ~~~~~~~~~~~i~~L~~a~~~~~i~syaQGf~ll~~as~~y~w~l~l~~ia~iW~~GCIIrs~lL~~i~~~~~~~~~l~~ 388 (475)
+ .+-|.||+|+++||+||+.|++||||||+++.+||.++++|+
T Consensus 233 --n----------------------------------PeCyqfDfD~~eVArVw~~GSVIrSwL~dLt~~Af~~~~dL~- 275 (341)
T TIGR00872 233 --N----------------------------------PECYQFDFDLEEVARVWRRGSVIRSWLLDLTAKAFEESADLE- 275 (341)
T ss_pred --C----------------------------------CCCCCCCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCC-
T ss_conf --7----------------------------------877777687488999870898641268889999975078821-
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH-HHHHHHCCCCCHHHHHHHHHHCCCCCEEEECC
Q ss_conf 007989999999524769999999998399847999999-99986217887589999876104573224248
Q gi|254780716|r 389 LLNIPSISEKVKKTIPSLRRIVVTCTENGYPVPSLSAAL-SYFDTFIHDRGTANLIQAQRDFFGSHGFDRKD 459 (475)
Q Consensus 389 Ll~~~~~~~~i~~~~~~lr~vv~~~i~~gip~P~lsssL-~y~~~~~~~~~~~nliqaqRD~FGaH~~~r~D 459 (475)
.|...+++..++ ||+|..|++.++|+||++.|| ..|.|...+.+..+.+.|+|..||.|..+..|
T Consensus 276 -----~~~G~v~dSGEG-rWtv~~a~dlg~p~PVia~sl~~Rf~Sr~~D~F~nKvlaalR~eFGgHa~kkk~ 341 (341)
T TIGR00872 276 -----EVEGIVEDSGEG-RWTVKEAVDLGVPIPVIATSLYERFASREKDDFKNKVLAALRKEFGGHAEKKKD 341 (341)
T ss_pred -----CEEEEECCCCCC-HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
T ss_conf -----322367027872-789999886278824899999987402345663552443104442755677889
No 10
>COG1023 Gnd Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=0 Score=561.48 Aligned_cols=274 Identities=38% Similarity=0.644 Sum_probs=256.0
Q ss_pred EEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHH
Q ss_conf 05698157111688999997898599973998999999971221127840328989998605778899997699069999
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQ 84 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~ 84 (475)
+||+||||.||.||++||.+.|++|++||++++.++++.+++ ++++.|+.+|++.|..||+||+|||++.+|++
T Consensus 2 ~iGmiGLGrMG~n~v~rl~~~ghdvV~yD~n~~av~~~~~~g------a~~a~sl~el~~~L~~pr~vWlMvPag~it~~ 75 (300)
T COG1023 2 QIGMIGLGRMGANLVRRLLDGGHDVVGYDVNQTAVEELKDEG------ATGAASLDELVAKLSAPRIVWLMVPAGDITDA 75 (300)
T ss_pred CCEEECCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCC------CCCCCCHHHHHHHCCCCCEEEEECCCCCCHHH
T ss_conf 011540005269999999838972899738889999998657------75436799999746987479997337773689
Q ss_pred HHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCC
Q ss_conf 99999720789989996798657899999999984799430675467600035684378845489998889999987501
Q gi|254780716|r 85 LIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGVKGARSGASLMVGGNEKAYNRVENILLSISAK 164 (475)
Q Consensus 85 vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~~gA~~G~slMvGG~~~~~~~~~piL~~iaak 164 (475)
|++.|.|.|++||+|||+|||+|+|+.||+++++++||+|+|||+|||+.|++.|.|+|+||++++|++++|+|+++|..
T Consensus 76 vi~~la~~L~~GDivIDGGNS~y~Ds~rr~~~l~~kgi~flD~GTSGG~~G~~~G~~lMiGG~~~a~~~~~pif~~lA~g 155 (300)
T COG1023 76 VIDDLAPLLSAGDIVIDGGNSNYKDSLRRAKLLAEKGIHFLDVGTSGGVWGAERGYCLMIGGDEEAVERLEPIFKALAPG 155 (300)
T ss_pred HHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHCCCEEEECCCHHHHHHHHHHHHHHCCC
T ss_conf 99998853678888987886325778999998876597178346777722553572388538689999988999862768
Q ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHHHHHHHHHHCCCCC-CCHHHHHHHHHHHHH
Q ss_conf 56786189856987467898877678788899989999999964-2899789999998606884-430799999999974
Q gi|254780716|r 165 YQNSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDS-LNKNPLEISHLFSKWDTGK-LSSYLIKITAEILSS 242 (475)
Q Consensus 165 ~~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~-~~~~~~~i~~vf~~w~~~~-~~syLl~i~~~il~~ 242 (475)
- ..+.||||+|||||||||||||||||||+|||+|+||+++ +.++.+++++| ||+|. ++||||++|++.|++
T Consensus 156 e---~Gyl~~Gp~GsGHfvKMVHNGIEYGmM~a~aEGfelL~~s~fD~D~~~VA~v---W~hGSVIrSWLldLt~~Af~~ 229 (300)
T COG1023 156 E---DGYLYCGPSGSGHFVKMVHNGIEYGMMQAIAEGFELLKNSPFDYDLEAVAEV---WNHGSVIRSWLLDLTAEAFKK 229 (300)
T ss_pred C---CCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH---HHCCCHHHHHHHHHHHHHHHH
T ss_conf 6---7630016887623289985108999999999899998718888777999999---827645999999999999854
Q ss_pred CCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 056799952001023336587167789887751788851467778887750057
Q gi|254780716|r 243 SDTITGMPIIDVICDKASQKGTGIRSIIEGHKLSSSMTITETAIFARNLSLYRD 296 (475)
Q Consensus 243 k~~~~g~~lid~i~d~~~~kgTg~Wt~~~a~~lgvp~p~i~~av~aR~~S~~k~ 296 (475)
. +-+|.|.+.+.+.|+|+||+++|+|+|||+|+|+.|++.||.|...+
T Consensus 230 d------~~L~q~~g~v~dSGEGrWTv~~aldlgvpaPVia~al~~Rf~S~~~d 277 (300)
T COG1023 230 D------PDLDQISGRVSDSGEGRWTVEEALDLGVPAPVIALALMMRFRSRQDD 277 (300)
T ss_pred C------CCHHHHCCEECCCCCCEEEHHHHHHCCCCCHHHHHHHHHHHHCCCHH
T ss_conf 8------88777617634588750666877763898159999999997503224
No 11
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=100.00 E-value=1.4e-45 Score=356.66 Aligned_cols=254 Identities=22% Similarity=0.347 Sum_probs=219.9
Q ss_pred EEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHH
Q ss_conf 05698157111688999997898599973998999999971221127840328989998605778899997699069999
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQ 84 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~ 84 (475)
+|||||||+||.+||+||+++||+|.||||+++++++|.+.++ ..+.|++|++...+ +||+|||++++|++
T Consensus 3 kIgfIGlG~MG~~ma~~L~~~G~~v~v~dr~~~~~~~l~~~Ga------~~~~s~~e~~~~~d---vvi~~l~~~~~v~~ 73 (295)
T PRK11559 3 KVGFIGLGIMGKPMSKNLLKAGYSLVVYDRNPEAIADVIAAGA------ETASTAKAIAEQCD---VIITMLPNSPHVKE 73 (295)
T ss_pred EEEEECCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCC------CCCCCHHHHHHCCC---EEEEECCCCCCHHH
T ss_conf 8999840576999999999789958999299999999998599------20399999984388---78996689810776
Q ss_pred HH---HHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCC-EEEEECCHHHHHHHHHHHHH
Q ss_conf 99---999720789989996798657899999999984799430675467600035684-37884548999888999998
Q gi|254780716|r 85 LI---DKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGVKGARSGA-SLMVGGNEKAYNRVENILLS 160 (475)
Q Consensus 85 vi---~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~~gA~~G~-slMvGG~~~~~~~~~piL~~ 160 (475)
|+ +++++.+.+|+++||+||++|.++++++++++++|++|+|||||||+.+|++|. ++|+||++++|++++|+|+.
T Consensus 74 v~~g~~gi~~~~~~g~iiid~sT~~p~~~~~~a~~~~~~g~~~lDaPVsGg~~~A~~G~L~~mvgG~~~~~~~~~piL~~ 153 (295)
T PRK11559 74 VALGENGIIEGAKPGTVLIDMSSIAPLASREISEALKAKGIEMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKA 153 (295)
T ss_pred HHHCCCCCHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHCCCEEEECCCHHHHHHHHHHHHC
T ss_conf 63077660113899988998999999999999999996598389424768868898488149967988999999999942
Q ss_pred HHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf 75015678618985698746789887767878889998999999996428997899999986068844307999999999
Q gi|254780716|r 161 ISAKYQNSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKNPLEISHLFSKWDTGKLSSYLIKITAEIL 240 (475)
Q Consensus 161 iaak~~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~~i~~vf~~w~~~~~~syLl~i~~~il 240 (475)
|+.+ +.|+|+.|+||.+||+||.+.++.+++++|++.+.++ .+++++.+.+++ +.+..+|+.++.....+
T Consensus 154 ~~~~------i~~~G~~G~g~~~Kl~nN~l~~~~~~a~aEal~la~k-~Gld~~~~~~vl---~~~~~~S~~~~~~~p~~ 223 (295)
T PRK11559 154 MAGS------VVHTGEIGAGNVTKLANQVIVALNIAAMSEALTLATK-AGVNPDLVYQAI---RGGLAGSTVLDAKAPMV 223 (295)
T ss_pred CCCC------EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHHHHHHHH---HCCCCCCHHHHHHCCHH
T ss_conf 6556------0342894589999999999999999999999999998-599999999999---73765787886016012
Q ss_pred HHCCCCCCCCCHHH-CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf 74056799952001-0233365871677898877517888514677
Q gi|254780716|r 241 SSSDTITGMPIIDV-ICDKASQKGTGIRSIIEGHKLSSSMTITETA 285 (475)
Q Consensus 241 ~~k~~~~g~~lid~-i~d~~~~kgTg~Wt~~~a~~lgvp~p~i~~a 285 (475)
...|-..+ +-++. .+| -.-..+.|-++|+|.|+...+
T Consensus 224 l~~d~~~~-f~l~l~~KD-------l~l~~~~a~~~g~~lp~~~~~ 261 (295)
T PRK11559 224 MDRNFKPG-FRIDLHIKD-------LANALDTSHGVGAQLPLTAAV 261 (295)
T ss_pred HCCCCCCC-CCHHHHHHH-------HHHHHHHHHHCCCCCHHHHHH
T ss_conf 23799998-858999989-------999999999709998499999
No 12
>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase; InterPro: IPR011548 3-hydroxyisobutyrate dehydrogenase is an enzyme that catalyzes the NAD+-dependent oxidation of 3-hydroxyisobutyrate to methylmalonate semialdehyde of the valine catabolism pathway. In Pseudomonas aeruginosa, 3-hydroxyisobutyrate dehydrogenase (mmsB) is co-induced with methylmalonate-semialdehyde dehydrogenase (mmsA) when grown on medium containing valine as the sole carbon source. The positive transcriptional regulator of this operon (mmsR) is located upstream of these genes and has been identified as a member of the XylS/AraC family of transcriptional regulators . 3-hydroxyisobutyrate dehydrogenase shares high sequence homology to the characterised 3-hydroxyisobutyrate dehydrogenase from rat liver with conservation of proposed NAD+ binding residues at the N-terminus (G-8,10,13,24 and D-31). This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate . HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase. ; GO: 0008442 3-hydroxyisobutyrate dehydrogenase activity, 0051287 NAD binding.
Probab=100.00 E-value=0 Score=360.62 Aligned_cols=199 Identities=22% Similarity=0.362 Sum_probs=189.3
Q ss_pred EEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHH-
Q ss_conf 9815711168899999789859997399899999997122112784032898999860577889999769906999999-
Q gi|254780716|r 8 IIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQLI- 86 (475)
Q Consensus 8 iIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi- 86 (475)
||||||||.|||+||+|+||+|.+||+.++.++++++.|. ..+.|+.|.++..| +||+|||++++|.+|+
T Consensus 1 FIGLGNMGgPMA~NL~KAGH~v~~FDL~p~av~~~v~aG~------~~A~S~~~a~~~Ad---~vITMLPAg~HV~sVY~ 71 (290)
T TIGR01692 1 FIGLGNMGGPMAANLLKAGHAVRVFDLSPKAVEELVEAGA------QAAASAAEAAEGAD---VVITMLPAGKHVISVYS 71 (290)
T ss_pred CCCCCCCCHHHHHHHHHHCCEEEEEECCHHHHHHHHHCCH------HCCCCHHHHHCCCC---EEEECCCCCHHHHHHHH
T ss_conf 9788888227999986118725775178899999996002------20545798845588---68634886034899983
Q ss_pred --HHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCC-EEEEECCHHHHHHHHHHHHHHHC
Q ss_conf --999720789989996798657899999999984799430675467600035684-37884548999888999998750
Q gi|254780716|r 87 --DKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGVKGARSGA-SLMVGGNEKAYNRVENILLSISA 163 (475)
Q Consensus 87 --~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~~gA~~G~-slMvGG~~~~~~~~~piL~~iaa 163 (475)
++|++...++..+|||||++|+.+++.+++++++|..|+|+|||||.-||+.|. +|||||.++.|++++|+|+.|+.
T Consensus 72 gd~gIL~~~~K~~LlIDcSTIDpdsAr~~A~~Aa~~G~~f~DAPVSGG~GgA~AGTLtFmVGG~a~~F~~~~p~L~~Mg~ 151 (290)
T TIGR01692 72 GDDGILAKVAKGSLLIDCSTIDPDSARKVAELAAAHGLVFVDAPVSGGVGGARAGTLTFMVGGEAEEFARARPVLEPMGR 151 (290)
T ss_pred CCHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCC
T ss_conf 31334113678896332456786789999999998187210367775356520122305643765357889999853666
Q ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf 15678618985698746789887767878889998999999996428997899999986
Q gi|254780716|r 164 KYQNSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKNPLEISHLFSK 222 (475)
Q Consensus 164 k~~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~~i~~vf~~ 222 (475)
+ +.|||..|+||-.|+|||+|....|-..||++.|--+ ++++++.+.+|.+.
T Consensus 152 ~------~~HcG~~GAGQ~AKICNNmlLGIsM~GtaEA~~Lg~k-lGLdp~~L~~i~~~ 203 (290)
T TIGR01692 152 N------IVHCGDHGAGQAAKICNNMLLGISMIGTAEAMALGEK-LGLDPKVLFEIANT 203 (290)
T ss_pred C------EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHHHHHHHHHH
T ss_conf 5------6866888875157899889999989999999999986-17888899999730
No 13
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=100.00 E-value=1.7e-44 Score=347.47 Aligned_cols=255 Identities=24% Similarity=0.386 Sum_probs=220.4
Q ss_pred EEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 05698157111688999997898599973998999999-97122112784032898999860577889999769906999
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVF-IKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l-~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
+|||||||+||.+||.||+++||+|.||||++++..++ .+.++ ..+.++.|.+...+ +||+|||++++|+
T Consensus 2 kIafIGLG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga------~~a~s~~eaa~~aD---vVitmv~~~~~V~ 72 (286)
T COG2084 2 KIAFIGLGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGA------TVAASPAEAAAEAD---VVITMLPDDAAVR 72 (286)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCC------EECCCHHHHHHHCC---EEEEECCCHHHHH
T ss_conf 07998573525999999997798789980885665689997298------00388999996199---8999617989999
Q ss_pred HHH---HHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCC-EEEEECCHHHHHHHHHHHH
Q ss_conf 999---999720789989996798657899999999984799430675467600035684-3788454899988899999
Q gi|254780716|r 84 QLI---DKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGVKGARSGA-SLMVGGNEKAYNRVENILL 159 (475)
Q Consensus 84 ~vi---~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~~gA~~G~-slMvGG~~~~~~~~~piL~ 159 (475)
+|+ +++.+.+++|.++|||||++|..+++.++.++++|++|+|+|||||+.+|.+|. ++|+||++++|++++|+|+
T Consensus 73 ~V~~g~~g~~~~~~~G~i~IDmSTisp~~a~~~a~~~~~~G~~~lDAPVsGg~~~A~~GtLtimvGG~~~~f~r~~pvl~ 152 (286)
T COG2084 73 AVLFGENGLLEGLKPGAIVIDMSTISPETARELAAALAAKGLEFLDAPVSGGVPGAAAGTLTIMVGGDAEAFERAKPVLE 152 (286)
T ss_pred HHHHCCCCHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHCCEEEEECCCHHHHHHHHHHHH
T ss_conf 99818533533378997899878999899999999999669868946765883123207169994799999998899999
Q ss_pred HHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 87501567861898569874678988776787888999899999999642899789999998606884430799999999
Q gi|254780716|r 160 SISAKYQNSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKNPLEISHLFSKWDTGKLSSYLIKITAEI 239 (475)
Q Consensus 160 ~iaak~~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~~i~~vf~~w~~~~~~syLl~i~~~i 239 (475)
+++.+ +.|+||.|+||.+|||||.+--+.|++++|++.+.++ .+++++.+.++. .++..+||.++.....
T Consensus 153 ~~g~~------i~~~G~~G~G~~~Kl~nn~l~~~~~~a~aEAl~la~k-~Gld~~~~~~vi---~~~~~~s~~~e~~~~~ 222 (286)
T COG2084 153 AMGKN------IVHVGPVGAGQAAKLANNILLAGNIAALAEALALAEK-AGLDPDVVLEVI---SGGAAGSWILENYGPR 222 (286)
T ss_pred HHCCC------EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHHHHHHHH---HCCCCCCHHHHHHCCH
T ss_conf 86075------6987898705999999999999999999999999998-097989999998---5355689488861404
Q ss_pred HHHCCCCCCCCCHHH-CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf 974056799952001-02333658716778988775178885146777
Q gi|254780716|r 240 LSSSDTITGMPIIDV-ICDKASQKGTGIRSIIEGHKLSSSMTITETAI 286 (475)
Q Consensus 240 l~~k~~~~g~~lid~-i~d~~~~kgTg~Wt~~~a~~lgvp~p~i~~av 286 (475)
.-+.+...+ +-++. .+| -.-...+|-++++|.|....+.
T Consensus 223 m~~~~~~p~-F~v~~~~KD-------l~la~~~A~~~g~~lP~~~~~~ 262 (286)
T COG2084 223 MLEGDFSPG-FAVDLMLKD-------LGLALDAAKELGAPLPLTALAA 262 (286)
T ss_pred HHCCCCCCC-HHHHHHHHH-------HHHHHHHHHHCCCCCCHHHHHH
T ss_conf 426899963-268988867-------9999999996389982799999
No 14
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase; InterPro: IPR006398 These sequences represent 2-hydroxy-3-oxopropionate reductase (1.1.1.60 from EC), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism , .; GO: 0008679 2-hydroxy-3-oxopropionate reductase activity, 0046487 glyoxylate metabolic process.
Probab=100.00 E-value=1.6e-42 Score=333.01 Aligned_cols=252 Identities=24% Similarity=0.382 Sum_probs=221.6
Q ss_pred EEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHH
Q ss_conf 05698157111688999997898599973998999999971221127840328989998605778899997699069999
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQ 84 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~ 84 (475)
++||||||.||.||+.||+++||+|+|+++++++.++++..|+ ..+.|.++.+..+| +|++|||+.++|++
T Consensus 1 KvgfIGLGIMG~PMs~NL~kAGyql~v~t~~~e~~d~l~aaGa------~~a~ta~~~~e~~D---vi~~MvP~sPqVee 71 (291)
T TIGR01505 1 KVGFIGLGIMGKPMSKNLLKAGYQLVVATLEQEVLDELLAAGA------ESAETAKEVVEDAD---VIVTMVPDSPQVEE 71 (291)
T ss_pred CEEEEECCCCCCHHHHHHHHCCCEEEEEECCCHHHHHHHHCCC------HHHHHHHHHHHHCC---EEEEECCCCCCEEE
T ss_conf 9045635877865789997549468883077048999986173------22899999997489---79984387697015
Q ss_pred HH---HHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCC-EEEEECCHHHHHHHHHHHHH
Q ss_conf 99---999720789989996798657899999999984799430675467600035684-37884548999888999998
Q gi|254780716|r 85 LI---DKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGVKGARSGA-SLMVGGNEKAYNRVENILLS 160 (475)
Q Consensus 85 vi---~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~~gA~~G~-slMvGG~~~~~~~~~piL~~ 160 (475)
|. ++++...++|.++||||...|..|++.+++++++|++++|+||||||.||+.|. |+|||||+..|++++|+|++
T Consensus 72 va~GenGi~e~ak~G~~lvDMSSI~P~~s~~~a~a~k~kGid~LDAPVSGGE~gAiegtLSiMVGGd~A~Fd~~kpL~ea 151 (291)
T TIGR01505 72 VAFGENGILEAAKKGKVLVDMSSIAPLESKELAKAVKEKGIDVLDAPVSGGEIGAIEGTLSIMVGGDKAVFDKVKPLLEA 151 (291)
T ss_pred EEECCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHH
T ss_conf 65568752125688877887056782668999999997288452077789871001243658764861106766699997
Q ss_pred HHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf 75015678618985698746789887767878889998999999996428997899999986068844307999999999
Q gi|254780716|r 161 ISAKYQNSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKNPLEISHLFSKWDTGKLSSYLIKITAEIL 240 (475)
Q Consensus 161 iaak~~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~~i~~vf~~w~~~~~~syLl~i~~~il 240 (475)
++.. |+|+|+.|+|+.+|.-|--|-=-..|+++|+.-++.++ +-+++.+.++ .+.|.-.|-.|+...+-+
T Consensus 152 lgk~------ivl~G~~G~Gqt~K~ANQ~IVAlNI~A~sEAl~fa~Ka-Gvdp~~v~qa---l~GGlAgStvL~~k~~~~ 221 (291)
T TIGR01505 152 LGKS------IVLVGENGDGQTVKVANQVIVALNIEAVSEALVFAEKA-GVDPKLVLQA---LRGGLAGSTVLEVKKERV 221 (291)
T ss_pred HCCC------EEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHC-CCCHHHHHHH---HCCCCCCHHHHHHCCCCC
T ss_conf 2695------89878889974040544788888699999999998752-8899999998---618650102331126321
Q ss_pred HHCCCCCCCCCHHH-CCCCCCCCCHHHHHHHHHHHHCCCCCHHH
Q ss_conf 74056799952001-02333658716778988775178885146
Q gi|254780716|r 241 SSSDTITGMPIIDV-ICDKASQKGTGIRSIIEGHKLSSSMTITE 283 (475)
Q Consensus 241 ~~k~~~~g~~lid~-i~d~~~~kgTg~Wt~~~a~~lgvp~p~i~ 283 (475)
-+++.+.| +-||. ++|-. -..+.|-.++...|.-+
T Consensus 222 ~~R~FkPG-FrIdLH~KDl~-------~ald~a~~vga~LP~tA 257 (291)
T TIGR01505 222 LDRDFKPG-FRIDLHQKDLA-------LALDAAKAVGAALPVTA 257 (291)
T ss_pred CCCCCCCC-CEEHHHHHHHH-------HHHHHHHHHHHHCCHHH
T ss_conf 25788798-53053165589-------99999899886367168
No 15
>KOG0409 consensus
Probab=100.00 E-value=1.2e-40 Score=319.10 Aligned_cols=259 Identities=21% Similarity=0.316 Sum_probs=216.0
Q ss_pred CCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 88056981571116889999978985999739989999999712211278403289899986057788999976990699
Q gi|254780716|r 3 QADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 3 k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
+++|||||||+||.+|+.||+++||+|+||||+.+++++|.+.|+ ..+++|.|+++..+ +||+|||+..+|
T Consensus 35 ~~~iGFIGLG~MG~~M~~nLik~G~kVtV~dr~~~k~~~f~~~Ga------~v~~sPaeVae~sD---vvitmv~~~~~v 105 (327)
T KOG0409 35 KTRIGFIGLGNMGSAMVSNLIKAGYKVTVYDRTKDKCKEFQEAGA------RVANSPAEVAEDSD---VVITMVPNPKDV 105 (327)
T ss_pred CCEEEEEEECCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCH------HHHCCHHHHHHHCC---EEEEECCCHHHH
T ss_conf 551357743411189999999759879999586788789997050------14079799986368---899976880766
Q ss_pred HHHHH---HHHHCCCCCCEE-EECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCC-EEEEECCHHHHHHHHHH
Q ss_conf 99999---997207899899-96798657899999999984799430675467600035684-37884548999888999
Q gi|254780716|r 83 DQLID---KLKPLLSPEDIL-LDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGVKGARSGA-SLMVGGNEKAYNRVENI 157 (475)
Q Consensus 83 ~~vi~---~l~~~l~~g~ii-ID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~~gA~~G~-slMvGG~~~~~~~~~pi 157 (475)
++|+. +++..+++|... ||+||++|..+.++++.++.+|.+|+|+|||||..+|+.|. +||+|||++.|+.+.|+
T Consensus 106 ~~v~~g~~Gvl~g~~~g~~~~vDmSTidp~~s~ei~~~i~~~~~~~vDAPVSGg~~~A~~G~LtimagGde~~~~~~~~~ 185 (327)
T KOG0409 106 KDVLLGKSGVLSGIRPGKKATVDMSTIDPDTSLEIAKAISNKGGRFVDAPVSGGVKGAEEGTLTIMAGGDEALFEAASPV 185 (327)
T ss_pred HHHHCCCCCCEEECCCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHCCEEEEEECCCHHHHHHHHHH
T ss_conf 88840778623521588834776244687889999999974798698566667701333372899946869999988999
Q ss_pred HHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHH
Q ss_conf 99875015678618985698746789887767878889998999999996428997899999986068844307999999
Q gi|254780716|r 158 LLSISAKYQNSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKNPLEISHLFSKWDTGKLSSYLIKITA 237 (475)
Q Consensus 158 L~~iaak~~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~~i~~vf~~w~~~~~~syLl~i~~ 237 (475)
|+.|+.+ ++|+|..|+|+.+|||||.+....|-.+||+..+-.+ .+++...+.+|++. |..-|+.++.-.
T Consensus 186 ~~~mGk~------~~~~G~~GnG~~~Kl~nnm~~g~~M~g~aEal~la~r-~GLd~~~l~eiln~---G~~~S~~~~~~~ 255 (327)
T KOG0409 186 FKLMGKN------VVFLGGVGNGQAAKLCNNMLLGSSMVGLAEALALADR-LGLDAKKLLEILNT---GRCWSSMFYNPV 255 (327)
T ss_pred HHHHCCE------EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHHHHHHHHHC---CCCCCHHHHCCC
T ss_conf 9973251------8983465751788999999999999999999999998-08989999999735---775667775758
Q ss_pred HHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf 99974056799952001023336587167789887751788851467778
Q gi|254780716|r 238 EILSSSDTITGMPIIDVICDKASQKGTGIRSIIEGHKLSSSMTITETAIF 287 (475)
Q Consensus 238 ~il~~k~~~~g~~lid~i~d~~~~kgTg~Wt~~~a~~lgvp~p~i~~av~ 287 (475)
.-..+.+-..+-++--..+| -.-...+|-+.++|.|..+.|-.
T Consensus 256 p~m~k~dy~p~f~~~~m~KD-------Lgla~~~a~~~~~~~P~~slA~q 298 (327)
T KOG0409 256 PGMLKGDYNPGFALKLMVKD-------LGLALNAAESVKVPMPLGSLAHQ 298 (327)
T ss_pred CHHHCCCCCCCCHHHHHHHH-------HHHHHHHHHCCCCCCCHHHHHHH
T ss_conf 60103778986148999988-------89999766404898846789999
No 16
>pfam03446 NAD_binding_2 NAD binding domain of 6-phosphogluconate dehydrogenase. The NAD binding domain of 6-phosphogluconate dehydrogenase adopts a Rossmann fold.
Probab=100.00 E-value=2.6e-36 Score=287.22 Aligned_cols=159 Identities=38% Similarity=0.637 Sum_probs=150.0
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHH
Q ss_conf 99880569815711168899999789859997399899999997122112784032898999860577889999769906
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGD 80 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~ 80 (475)
|++ |||||||+||.+||+||+++||+|++|||++++++++.+++ +..+.+++|+++.++ +|++|||+++
T Consensus 1 M~~--Ig~IGlG~MG~~ma~~L~~~g~~v~v~d~~~~~~~~~~~~g------~~~~~s~~e~~~~~d---vIi~~l~~~~ 69 (163)
T pfam03446 1 MAK--IGFIGLGVMGSPMALNLLKAGYTVTVYNRTPEKVEELVAEG------AVAAASPAEAAASAD---VVITMVPAGA 69 (163)
T ss_pred CCE--EEEEEEHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCC------CEECCCHHHHHHCCC---EEEEECCCHH
T ss_conf 988--99983679899999999977996999979788779999839------955399999986199---9999258714
Q ss_pred HHHHHHH---HHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCC-EEEEECCHHHHHHHHH
Q ss_conf 9999999---99720789989996798657899999999984799430675467600035684-3788454899988899
Q gi|254780716|r 81 PVDQLID---KLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGVKGARSGA-SLMVGGNEKAYNRVEN 156 (475)
Q Consensus 81 ~v~~vi~---~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~~gA~~G~-slMvGG~~~~~~~~~p 156 (475)
++++|+. ++++.+.+|+++||+||++|+++++++++++++|++|+|||||||+.+|++|. ++|+||++++|++++|
T Consensus 70 ~v~~V~~~~~gl~~~~~~g~iiid~sT~~p~~~~~~~~~~~~~g~~~lDaPVsGg~~~A~~G~L~~m~gG~~~~~~~~~p 149 (163)
T pfam03446 70 AVDAVIFGEDGLLPGLKPGDIIIDGSTISPDDTRRLAKELKEKGIRFLDAPVSGGEEGAEAGTLSIMVGGDEEAFERVKP 149 (163)
T ss_pred HHHEEECCCCCHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCEEEEECCCHHHHHHHHH
T ss_conf 54022026313323135898898679899999999999875303443478776898999448879997589999999999
Q ss_pred HHHHHHCCCCCCCEEEEECC
Q ss_conf 99987501567861898569
Q gi|254780716|r 157 ILLSISAKYQNSPCCALLGP 176 (475)
Q Consensus 157 iL~~iaak~~~~~cv~y~G~ 176 (475)
+|++++.+ ++|+||
T Consensus 150 ~l~~~~~~------~~~~GP 163 (163)
T pfam03446 150 ILEAMGAC------VTYIGP 163 (163)
T ss_pred HHHHHCCC------CEEECC
T ss_conf 99997394------889592
No 17
>COG1023 Gnd Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]
Probab=99.85 E-value=2.4e-21 Score=176.88 Aligned_cols=133 Identities=26% Similarity=0.460 Sum_probs=119.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCCCCCCHHH
Q ss_conf 78899999999999999999999999996110145667988999985189468537899999998708885200079899
Q gi|254780716|r 316 FDSFVKDLENALYASTILSFTQGFWVIGKSSEKYSWSLSLATIARIWRAGCIIRSQILNDIVKSLTEDPSSTNLLNIPSI 395 (475)
Q Consensus 316 ~~~~i~~L~~a~~~~~i~syaQGf~ll~~as~~y~w~l~l~~ia~iW~~GCIIrs~lL~~i~~~~~~~~~l~~Ll~~~~~ 395 (475)
..-|++.+++.+-.+++.+|++||++|+++. |++|+++|+++||.|++||||||++..++|+++++| +.|
T Consensus 167 sGHfvKMVHNGIEYGmM~a~aEGfelL~~s~----fD~D~~~VA~vW~hGSVIrSWLldLt~~Af~~d~~L------~q~ 236 (300)
T COG1023 167 SGHFVKMVHNGIEYGMMQAIAEGFELLKNSP----FDYDLEAVAEVWNHGSVIRSWLLDLTAEAFKKDPDL------DQI 236 (300)
T ss_pred CCHHHHHHHCCHHHHHHHHHHHHHHHHHHCC----CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCH------HHH
T ss_conf 6232899851089999999998999987188----887779999998276459999999999998548887------776
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH-HHHHHCCCCCHHHHHHHHHHCCCCCEEEECC
Q ss_conf 999995247699999999983998479999999-9986217887589999876104573224248
Q gi|254780716|r 396 SEKVKKTIPSLRRIVVTCTENGYPVPSLSAALS-YFDTFIHDRGTANLIQAQRDFFGSHGFDRKD 459 (475)
Q Consensus 396 ~~~i~~~~~~lr~vv~~~i~~gip~P~lsssL~-y~~~~~~~~~~~nliqaqRD~FGaH~~~r~D 459 (475)
...+.+..++ ||+|..+++.|+|+|+++.||. .|-+.....+..+++.|+|+.||+|..++++
T Consensus 237 ~g~v~dSGEG-rWTv~~aldlgvpaPVia~al~~Rf~S~~~d~f~~kvlaalR~~FGgH~vk~k~ 300 (300)
T COG1023 237 SGRVSDSGEG-RWTVEEALDLGVPAPVIALALMMRFRSRQDDTFAGKVLAALRNEFGGHAVKKKN 300 (300)
T ss_pred CCEECCCCCC-EEEHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 1763458875-066687776389815999999999750322467889999999874775544679
No 18
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=99.67 E-value=1.8e-15 Score=133.64 Aligned_cols=133 Identities=31% Similarity=0.490 Sum_probs=117.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCCCCCCHH
Q ss_conf 27889999999999999999999999999611014566798899998518946853789999999870888520007989
Q gi|254780716|r 315 CFDSFVKDLENALYASTILSFTQGFWVIGKSSEKYSWSLSLATIARIWRAGCIIRSQILNDIVKSLTEDPSSTNLLNIPS 394 (475)
Q Consensus 315 ~~~~~i~~L~~a~~~~~i~syaQGf~ll~~as~~y~w~l~l~~ia~iW~~GCIIrs~lL~~i~~~~~~~~~l~~Ll~~~~ 394 (475)
....+++.+++.+.++.+...+++|+|++. .++++|+.+|+++|+.|++|+|+|++...++|.+++.++.
T Consensus 167 GaGh~vKmVhNgIey~~mq~iaE~~~ll~~----~~~~~d~~~v~~~w~~g~~~~S~L~ei~~~~l~~~~~ld~------ 236 (301)
T PRK09599 167 GAGHFVKMVHNGIEYGMMQAYAEGFELLEA----SRFDLDLAAVAEVWRRGSVIRSWLLDLTADALAEDPKLDE------ 236 (301)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHH------
T ss_conf 823899999999999999999999999986----6788789999999856882113899999999711885422------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH-HHHHHHCCCCCHHHHHHHHHHCCCCCEEEEC
Q ss_conf 999999524769999999998399847999999-9998621788758999987610457322424
Q gi|254780716|r 395 ISEKVKKTIPSLRRIVVTCTENGYPVPSLSAAL-SYFDTFIHDRGTANLIQAQRDFFGSHGFDRK 458 (475)
Q Consensus 395 ~~~~i~~~~~~lr~vv~~~i~~gip~P~lsssL-~y~~~~~~~~~~~nliqaqRD~FGaH~~~r~ 458 (475)
+.+...++.++ ||++..+++.|+|+|++++|| +.|.+...+....+++.|+|+-||+|.+++.
T Consensus 237 i~~~~~~~gtG-~wt~~~a~~lgvp~p~i~~a~~aR~~S~~~~~~~~k~~sa~r~~fg~h~~~~~ 300 (301)
T PRK09599 237 ISGYVADSGEG-RWTVEAAIELGVPAPVIAAALFARFRSRQEDSFADKVLAALRNGFGGHAVKKK 300 (301)
T ss_pred HCCCCCCCCCH-HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCC
T ss_conf 14612678718-99999999859985899999999998466765056599998876289876678
No 19
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=99.65 E-value=2.8e-15 Score=132.21 Aligned_cols=133 Identities=27% Similarity=0.450 Sum_probs=117.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCCCCCCHH
Q ss_conf 27889999999999999999999999999611014566798899998518946853789999999870888520007989
Q gi|254780716|r 315 CFDSFVKDLENALYASTILSFTQGFWVIGKSSEKYSWSLSLATIARIWRAGCIIRSQILNDIVKSLTEDPSSTNLLNIPS 394 (475)
Q Consensus 315 ~~~~~i~~L~~a~~~~~i~syaQGf~ll~~as~~y~w~l~l~~ia~iW~~GCIIrs~lL~~i~~~~~~~~~l~~Ll~~~~ 394 (475)
....+++.+++.+.++.+..++.+|++++++ +.++|+.++++.|+.|++++||||+...+++.+++.++ .
T Consensus 165 GsGh~vKmvnN~Iey~~mq~iaEa~~l~~~~----~~~~d~~~v~~~w~~G~~~~S~L~ei~~~~l~~~~~l~------~ 234 (298)
T PRK12490 165 GSGHFLKMVHNGIEYGMMQAYAEGFELLDKS----DFDFDVEDVARVWANGSVIRSWLLDLTVKALAEDPKLS------G 234 (298)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHH------H
T ss_conf 7538899999999999999999999999867----99888999999995776266699999999854599743------3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH-HHHHHHCCCCCHHHHHHHHHHCCCCCEEEEC
Q ss_conf 999999524769999999998399847999999-9998621788758999987610457322424
Q gi|254780716|r 395 ISEKVKKTIPSLRRIVVTCTENGYPVPSLSAAL-SYFDTFIHDRGTANLIQAQRDFFGSHGFDRK 458 (475)
Q Consensus 395 ~~~~i~~~~~~lr~vv~~~i~~gip~P~lsssL-~y~~~~~~~~~~~nliqaqRD~FGaH~~~r~ 458 (475)
|...+.++.+. ||++..+.+.|+|+|++++|| ++|.+...+.+..+++.|+|+.||+|.++|+
T Consensus 235 i~~~~~~~Gtg-~wt~~~A~~lgvp~P~i~~Al~~R~~S~~~~~f~~k~~sa~r~~fggh~~~~k 298 (298)
T PRK12490 235 IKGYMNDSGEG-RWTVEEAIELAVAAPVIAASLFMRFASQEDDSFHMKVVSALRNQFGGHAVVKK 298 (298)
T ss_pred CCCCCCCCCCH-HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCC
T ss_conf 26633688951-99999999839991699999999998657886078899999876288777889
No 20
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=99.57 E-value=5.9e-12 Score=107.65 Aligned_cols=208 Identities=17% Similarity=0.181 Sum_probs=151.8
Q ss_pred EEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCC--------------CCCCCEECCCHHHHHHHCCCCC
Q ss_conf 05698157111688999997898599973998999999971221--------------1278403289899986057788
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISG--------------LSQKVIVTKNLEQMVEAVCKPR 70 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~--------------~~~~~~~~~s~~e~v~~l~~pr 70 (475)
+|++||||-.|.++|.-|+++|++|.+||.++++++.+.+.... ...++....+.++.+ ..++
T Consensus 2 kI~ViGlGyVGl~~a~~lA~~G~~V~g~D~d~~~i~~l~~g~~p~~E~gl~~ll~~~~~~~~l~~ttd~~~~i---~~~d 78 (411)
T TIGR03026 2 KIAVIGLGYVGLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAI---RDAD 78 (411)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEECCHHHHH---HHCC
T ss_conf 7999897877999999999489948999899999999977989978989899999998639979987889987---2099
Q ss_pred EEEEECCCH---------HHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHC--------CCCEECCCCC---
Q ss_conf 999976990---------69999999997207899899967986578999999999847--------9943067546---
Q gi|254780716|r 71 KILMMVTDG---------DPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEK--------GIYFIGIGVS--- 130 (475)
Q Consensus 71 ~Iil~vp~g---------~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~k--------gi~fid~pVS--- 130 (475)
++|+|||.+ ..++++++.+.+.++++++||--||..|..|++....+.++ .+++.-+|=-
T Consensus 79 ii~I~V~TP~~~~g~~d~s~l~~a~~~i~~~l~~~~lvii~STV~pGTt~~i~~~ile~~~~~~~g~df~v~~~PEfl~e 158 (411)
T TIGR03026 79 VIIICVPTPLKEDGSPDLSYVESAAETIAKHLRKGATVVLESTVPPGTTEEVVKPILERASGLKLGEDFYLAYNPEFLRE 158 (411)
T ss_pred EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEHHHHHHHHHHHCCCCCCCCEEEEECCCCCCC
T ss_conf 99997689866688721389999999999766899989995786868104899998877404666885479968354687
Q ss_pred CCC-CCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 760-0035684378845489998889999987501567861898569874678988776787888999899999999642
Q gi|254780716|r 131 GGV-KGARSGASLMVGGNEKAYNRVENILLSISAKYQNSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSL 209 (475)
Q Consensus 131 GG~-~gA~~G~slMvGG~~~~~~~~~piL~~iaak~~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~ 209 (475)
|.. ..-++-+-+..|.+++.-+.++.+++.+..+. ...+-..-+.-++|.+.|.--.--...+-|...++.+ .
T Consensus 159 G~a~~d~~~~~riV~G~~~~~~~~~~~ly~~~~~~~-----~i~~~~~~~AEl~K~~~N~~~a~~Isf~Nela~lce~-~ 232 (411)
T TIGR03026 159 GNAVHDLLNPDRIVGGETEEAGEAVAELYAPIIEDG-----PVLVTSIETAEMIKLAENTFRAVKIAFANELARICEA-L 232 (411)
T ss_pred CCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCC-----EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
T ss_conf 472234236985999684999999999999746598-----4982588999999999999999889999999999998-5
Q ss_pred CCCHHHHHHHHH
Q ss_conf 899789999998
Q gi|254780716|r 210 NKNPLEISHLFS 221 (475)
Q Consensus 210 ~~~~~~i~~vf~ 221 (475)
+.+..++.+...
T Consensus 233 gid~~eV~~a~~ 244 (411)
T TIGR03026 233 GIDVYEVIEAAG 244 (411)
T ss_pred CCCHHHHHHHHC
T ss_conf 689999997617
No 21
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=99.53 E-value=2.1e-11 Score=103.60 Aligned_cols=209 Identities=18% Similarity=0.240 Sum_probs=148.5
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHH------------HCCC
Q ss_conf 9988056981571116889999978985999739989999999712211278403289899986------------0577
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVE------------AVCK 68 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~------------~l~~ 68 (475)
|+..+|++||||-.|.++|.-|+++|++|.+||.++++++.+.+ |... ..-..+++++. ..+.
T Consensus 1 m~~kkI~ViGlGYVGL~~a~~lA~~G~~Vig~D~d~~kv~~l~~-g~~p----~~Ep~l~~ll~~~~~~~~l~~t~~~~~ 75 (415)
T PRK11064 1 MSFETISVIGLGYIGLPTAAAFASRQKQVIGVDINQHAVDTINR-GEIH----IVEPDLDMVVKAAVEGGYLRATTTPVP 75 (415)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHC-CCCC----CCCCCHHHHHHHHHHCCCCEEECCHHH
T ss_conf 99887999886877899999999688948999899999999978-6899----889898999999986598365257467
Q ss_pred CCEEEEECCCH---------HHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHC--CCCE-------ECCCCC
Q ss_conf 88999976990---------69999999997207899899967986578999999999847--9943-------067546
Q gi|254780716|r 69 PRKILMMVTDG---------DPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEK--GIYF-------IGIGVS 130 (475)
Q Consensus 69 pr~Iil~vp~g---------~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~k--gi~f-------id~pVS 130 (475)
.+++|+|||.+ ..++++++.+.+.++++++||--||+.|..|++..+.+.+. ++.| -|-.+.
T Consensus 76 ad~iiI~V~TP~~~~~~~Dls~i~~a~~~I~~~l~~~~lVIi~STVppGTt~~i~~~l~~~~~~l~~~~~~~~~~d~~v~ 155 (415)
T PRK11064 76 ADAFLIAVPTPFKGDHEPDLSYVEAAAKSIAPVLKKGDLVILESTSPVGATEQMAEWLAEARPDLTFPQQAGEQADINIA 155 (415)
T ss_pred CCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCCEEEE
T ss_conf 89999988999789997202018889999997526886799637899971999999999855676512222667763798
Q ss_pred CCCCCCCCCCE--------EEEEC-CHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 76000356843--------78845-4899988899999875015678618985698746789887767878889998999
Q gi|254780716|r 131 GGVKGARSGAS--------LMVGG-NEKAYNRVENILLSISAKYQNSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADI 201 (475)
Q Consensus 131 GG~~gA~~G~s--------lMvGG-~~~~~~~~~piL~~iaak~~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~ 201 (475)
-.|+--+.|.+ -.+|| +++..+.+..+++.+... + + .+-..-++-++|++-|.--+-....+-|.
T Consensus 156 ~~PErl~eG~a~~d~~~~~rVIgg~~~~~~~~~~~ly~~~~~~----~-~-~~t~~~~AEl~K~~~N~~ra~~Isf~NEl 229 (415)
T PRK11064 156 YCPERVLPGQVMVELIKNDRVIGGMTPVCSARASELYKIFLEG----E-C-VVTNSRTAEMCKLTENSFRDVNIAFANEL 229 (415)
T ss_pred ECCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCC----C-E-EECCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 5855046775421114687257347889999999999997479----8-8-94378998887776788999999999999
Q ss_pred HHHHHHHCCCCHHHHHHHHH
Q ss_conf 99999642899789999998
Q gi|254780716|r 202 YGILRDSLNKNPLEISHLFS 221 (475)
Q Consensus 202 ~~~l~~~~~~~~~~i~~vf~ 221 (475)
..++.+ .+.+..|+.+...
T Consensus 230 a~lce~-~gid~~evi~~~~ 248 (415)
T PRK11064 230 SLICDD-QGINVWELIRLAN 248 (415)
T ss_pred HHHHHH-CCCCHHHHHHHHC
T ss_conf 999998-0999999999728
No 22
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating); InterPro: IPR004849 This family resembles a larger family of bacterial and eukaryotic 6-phosphogluconate dehydrogenases (Gnd) but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain Gnd, and in Aquifex aeolicus. .
Probab=99.48 E-value=5.2e-14 Score=122.81 Aligned_cols=81 Identities=20% Similarity=0.409 Sum_probs=71.4
Q ss_pred HCCCCHHHHHHHHHHCCCCC-CCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf 42899789999998606884-43079999999997405679995200102333658716778988775178885146777
Q gi|254780716|r 208 SLNKNPLEISHLFSKWDTGK-LSSYLIKITAEILSSSDTITGMPIIDVICDKASQKGTGIRSIIEGHKLSSSMTITETAI 286 (475)
Q Consensus 208 ~~~~~~~~i~~vf~~w~~~~-~~syLl~i~~~il~~k~~~~g~~lid~i~d~~~~kgTg~Wt~~~a~~lgvp~p~i~~av 286 (475)
-+.+|..|+|+| |++|+ ++||||++|...|++.- -||.|...+++.|+|+||+++|+|+|+|+|+|+.|+
T Consensus 238 qfDfD~~eVArV---w~~GSVIrSwL~dLt~~Af~~~~------dL~~~~G~v~dSGEGrWtv~~a~dlg~p~PVia~sl 308 (341)
T TIGR00872 238 QFDFDLEEVARV---WRRGSVIRSWLLDLTAKAFEESA------DLEEVEGIVEDSGEGRWTVKEAVDLGVPIPVIATSL 308 (341)
T ss_pred CCCCCHHHHHHH---HCCCCEEEHHHHHHHHHHHHCCC------CCCCEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHH
T ss_conf 776874889998---70898641268889999975078------821322367027872789999886278824899999
Q ss_pred HHHHHHHHHHH
Q ss_conf 88877500577
Q gi|254780716|r 287 FARNLSLYRDE 297 (475)
Q Consensus 287 ~aR~~S~~k~~ 297 (475)
..||.|..++.
T Consensus 309 ~~Rf~Sr~~D~ 319 (341)
T TIGR00872 309 YERFASREKDD 319 (341)
T ss_pred HHHHCCCCCCC
T ss_conf 98740234566
No 23
>COG0677 WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=99.42 E-value=2.4e-10 Score=95.78 Aligned_cols=255 Identities=19% Similarity=0.234 Sum_probs=173.7
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCC---------------CCCCCCEECCCHHHHHHHCCC
Q ss_conf 80569815711168899999789859997399899999997122---------------112784032898999860577
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKIS---------------GLSQKVIVTKNLEQMVEAVCK 68 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~---------------~~~~~~~~~~s~~e~v~~l~~ 68 (475)
..||+||||-+|.|+|.-++++|++|.+||.++.+++.+.. |. .....++...++++ ++.
T Consensus 10 ~~I~ViGLGYVGLPlA~~fA~~G~~ViG~DIn~~~Vd~ln~-G~~~i~e~~~~~~v~~~v~~g~lraTtd~~~----l~~ 84 (436)
T COG0677 10 ATIGVIGLGYVGLPLAAAFASAGFKVIGVDINQKKVDKLNR-GESYIEEPDLDEVVKEAVESGKLRATTDPEE----LKE 84 (436)
T ss_pred EEEEEECCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHC-CCCEEECCCHHHHHHHHHHCCCCEEECCHHH----CCC
T ss_conf 28999824644578899998769955757578899888757-8642546868899999986397157568556----254
Q ss_pred CCEEEEECCCH---------HHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHH--CCCCE-ECCCCCCCCCCC
Q ss_conf 88999976990---------6999999999720789989996798657899999999984--79943-067546760003
Q gi|254780716|r 69 PRKILMMVTDG---------DPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSE--KGIYF-IGIGVSGGVKGA 136 (475)
Q Consensus 69 pr~Iil~vp~g---------~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~--kgi~f-id~pVSGG~~gA 136 (475)
++++++|||.+ ..|.+....+.+.|++|++||-=||+.|..|.+...-+.+ -|..| -|-.+--.|+..
T Consensus 85 ~dv~iI~VPTPl~~~~~pDls~v~~aa~sIa~~L~kG~LVIlEST~~PGTTe~v~~plle~~sgL~~~~Df~laysPERv 164 (436)
T COG0677 85 CDVFIICVPTPLKKYREPDLSYVESAARSIAPVLKKGDLVILESTTPPGTTEEVVKPLLEERSGLKFGEDFYLAYSPERV 164 (436)
T ss_pred CCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCC
T ss_conf 88899993577678999884899999999997567788899964789985788899998506897656404686073321
Q ss_pred CCCC--------EEEEEC-CHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 5684--------378845-4899988899999875015678618985698746789887767878889998999999996
Q gi|254780716|r 137 RSGA--------SLMVGG-NEKAYNRVENILLSISAKYQNSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRD 207 (475)
Q Consensus 137 ~~G~--------slMvGG-~~~~~~~~~piL~~iaak~~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~ 207 (475)
.-|. .=.+|| +++.-+.+.-+.+.+-.+ +..+-..-..-++|+.-|----...-+.-|-- +.-+
T Consensus 165 ~PG~~~~el~~~~kVIgG~tp~~~e~a~~lY~~iv~~------~~~vts~~tAEm~Kl~EN~fRdVNIALaNEla-li~~ 237 (436)
T COG0677 165 LPGNVLKELVNNPKVIGGVTPKCAELAAALYKTIVEG------VIPVTSARTAEMVKLTENTFRDVNIALANELA-LICN 237 (436)
T ss_pred CCCCHHHHHHCCCCEEECCCHHHHHHHHHHHHHHEEE------EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
T ss_conf 8986002020178235368889999999999986177------99757747999999886334677899999999-9999
Q ss_pred HCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCH--H--HCCCCCCCCCHHHHHHHHHHHHCCCCCHH
Q ss_conf 428997899999986068844307999999999740567999520--0--10233365871677898877517888514
Q gi|254780716|r 208 SLNKNPLEISHLFSKWDTGKLSSYLIKITAEILSSSDTITGMPII--D--VICDKASQKGTGIRSIIEGHKLSSSMTIT 282 (475)
Q Consensus 208 ~~~~~~~~i~~vf~~w~~~~~~syLl~i~~~il~~k~~~~g~~li--d--~i~d~~~~kgTg~Wt~~~a~~lgvp~p~i 282 (475)
.+|.+-- ++++..|+... | ++++- ..--|.+.| | .+..++...|.-..-...|=+.+-..|--
T Consensus 238 ~~GIdvw---evIeaAnt~P~--~------~~~~P-GpGvGGHCIpvDP~fl~~ka~~yg~~~rlI~tAreIN~~mP~~ 304 (436)
T COG0677 238 AMGIDVW---EVIEAANTKPR--V------NIFYP-GPGVGGHCIPVDPYFLTWKAPEYGLPARLIRTAREINDSMPRH 304 (436)
T ss_pred HHCCCHH---HHHHHHCCCCC--E------EECCC-CCCCCCCCCCCCCHHEEECCCCCCCCHHHHHHHHHHHCCCCHH
T ss_conf 8298699---99998614981--3------20489-9998876356571540421600277628999998875458789
No 24
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=99.42 E-value=6.1e-11 Score=100.22 Aligned_cols=158 Identities=20% Similarity=0.270 Sum_probs=118.9
Q ss_pred EEEEEECCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 05698157111688999997898--5999739989999999712211278403289899986057788999976990699
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGF--RLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~--~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
+|.|||||.||..+|+.|.++|. .|++||++++..+...+.+... ..+.++.+. +..+++|++|+|-. .+
T Consensus 8 ~I~IiGlGLIGgSlA~alk~~~~~~~I~g~d~~~~~l~~A~~~g~id----~~~~~~~e~---~~~~DlIilatPv~-~~ 79 (307)
T PRK07502 8 RVALIGLGLIGSSLARAIRRQGLAGEIVGAARSAETRARARELGLGD----RVTTSAAEA---VKGADLVILCVPVG-AS 79 (307)
T ss_pred EEEEEEECHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCCC----HHCCCHHHH---HCCCCEEEEECCHH-HH
T ss_conf 68999278799999999985499857999849999999999869975----112777664---04589799917899-99
Q ss_pred HHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECC-CCCCCCC----CC----CCC-CEEEE---ECCHH
Q ss_conf 999999972078998999679865789999999998479943067-5467600----03----568-43788---45489
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGI-GVSGGVK----GA----RSG-ASLMV---GGNEK 149 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~-pVSGG~~----gA----~~G-~slMv---GG~~~ 149 (475)
.+++..+.+.++++.+|.|.|.+--.-.... +..-..+++|++. |+.|.+. .| -.| +.+.+ +.+++
T Consensus 80 ~~vl~~l~~~l~~~~ivTDvgSvK~~I~~~~-~~~~~~~~~FVg~HPmAGsE~sG~~~A~~~LF~~~~~iltp~~~~~~~ 158 (307)
T PRK07502 80 GAVAAEIAPHLKPGAIVTDVGSVKASVIAAM-APHLPEGVHFIPGHPLAGTEHSGPDAGFAELFENRWCILTPPEGTDPA 158 (307)
T ss_pred HHHHHHHHHHCCCCCEEEECCCCHHHHHHHH-HHHCCCCCCEECCCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCHH
T ss_conf 9999999855589968996632118999999-985677783672688767887551010014743870899679999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCEEEEECCC
Q ss_conf 9988899999875015678618985698
Q gi|254780716|r 150 AYNRVENILLSISAKYQNSPCCALLGPD 177 (475)
Q Consensus 150 ~~~~~~piL~~iaak~~~~~cv~y~G~~ 177 (475)
++++++.+++.++++ +..+-+.
T Consensus 159 ~~~~v~~lw~~lGa~------v~~m~~~ 180 (307)
T PRK07502 159 AVARLRAFWRALGAR------VEEMDPE 180 (307)
T ss_pred HHHHHHHHHHHCCCE------EEEECHH
T ss_conf 999999999963987------9994645
No 25
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=99.39 E-value=6.1e-11 Score=100.21 Aligned_cols=162 Identities=19% Similarity=0.230 Sum_probs=118.3
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 80569815711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
.+|+|||||.||..+|+.|.+.|++|++||++++..+...+.+... ....+++ .++.+++|++|+|- ..+.
T Consensus 2 mkI~IiGlGLIGgSla~al~~~~~~V~g~d~~~~~~~~A~~~g~id----~~~~~~~----~~~~aDliila~Pv-~~~~ 72 (280)
T PRK07417 2 MNIGIVGLGLIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGLVD----EASTDLS----LLKDCDLVILALPI-GLLL 72 (280)
T ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCC----EECCCHH----HHCCCCEEEECCCH-HHHH
T ss_conf 7899993185799999999968997999979999999999869975----2027874----60579989987974-7789
Q ss_pred HHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECC-CCCCCCC----CCC----CC-CEEEE---ECCHHH
Q ss_conf 99999972078998999679865789999999998479943067-5467600----035----68-43788---454899
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGI-GVSGGVK----GAR----SG-ASLMV---GGNEKA 150 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~-pVSGG~~----gA~----~G-~slMv---GG~~~~ 150 (475)
+++.++.+.++++.+|.|.|.+--.- .+.+.+..-+|++. |+.|.+. .|. .| +.+++ +.++++
T Consensus 73 ~~~~~~~~~l~~~~iitDv~SvK~~i----~~~~~~~~~~fVg~HPMAGsE~sG~~~a~~dLF~~~~~il~p~~~~~~~~ 148 (280)
T PRK07417 73 PPSEELIPALPPEAIVTDVGSVKEPI----VEAWEKLHPRFVGSHPMAGTAESGVEAGQRGLFKNRPWVLTPTENTDLAA 148 (280)
T ss_pred HHHHHHHHHCCCCCEEEECHHHHHHH----HHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEECCCCCCHHH
T ss_conf 99999986478984899652230789----99998607986236980768887712034667507539985688899999
Q ss_pred HHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHH
Q ss_conf 9888999998750156786189856987467898
Q gi|254780716|r 151 YNRVENILLSISAKYQNSPCCALLGPDGSGHFVK 184 (475)
Q Consensus 151 ~~~~~piL~~iaak~~~~~cv~y~G~~GsGh~vK 184 (475)
++.++.+++.++++ +..+-+.-.=..+=
T Consensus 149 ~~~~~~l~~~lGa~------~~~m~~~eHD~~~A 176 (280)
T PRK07417 149 LATVEELAVSLGSK------IYTADPAEHDRAVA 176 (280)
T ss_pred HHHHHHHHHHCCCE------EEECCCCCHHHHHH
T ss_conf 99999999984999------99999857669999
No 26
>PRK08507 prephenate dehydrogenase; Validated
Probab=99.35 E-value=1.9e-09 Score=89.23 Aligned_cols=162 Identities=20% Similarity=0.271 Sum_probs=114.5
Q ss_pred EEEEEECCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 05698157111688999997898--5999739989999999712211278403289899986057788999976990699
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGF--RLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~--~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
+|+|||+|.||..+|+.|.++|. .|++||++++..+...+.+.. ....+.++ +..+++|++|+|- ..+
T Consensus 2 ~I~IiGlGLiGgSla~alk~~~~~~~V~g~d~~~~~~~~A~~~g~i-----d~~~~~~~----i~~aDlVila~Pv-~~~ 71 (275)
T PRK08507 2 KIGIIGLGLMGGSLGLALKENKLISCVYGYDHNEEHEKDALDLGLV-----DEIVEFEE----IKECDVIFLAIPV-DAI 71 (275)
T ss_pred EEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCC-----CCCCCHHH----CCCCCEEEEECCH-HHH
T ss_conf 8999900878999999999509986799995999999999986998-----61067312----3657989991769-999
Q ss_pred HHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECC-CCCCCCC----CC----CCC-CEEEE---ECCHH
Q ss_conf 999999972078998999679865789999999998479943067-5467600----03----568-43788---45489
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGI-GVSGGVK----GA----RSG-ASLMV---GGNEK 149 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~-pVSGG~~----gA----~~G-~slMv---GG~~~ 149 (475)
.+++.++.+ +.++.+|.|.|.+-..-.....+ ...-+|++. |+.|.+. .| -.| +.+++ ..+++
T Consensus 72 ~~~l~~l~~-l~~~~iitDv~SvK~~i~~~~~~---~~~~~fVg~HPmAGsE~sG~~~a~~~LF~~~~~il~p~~~~~~~ 147 (275)
T PRK08507 72 IEILQKLLD-IKENTTIIDLGSTKAKIIESIPK---SIRKNFIAAHPMTGTEFSGPKAAFKGLYKGAVVVLCDLEKSGEK 147 (275)
T ss_pred HHHHHHHHH-CCCCCEEEECCCHHHHHHHHHHH---HCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCHH
T ss_conf 999999860-46788898343128999999986---25688443499788875445441077853985999688889799
Q ss_pred HHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHH
Q ss_conf 9988899999875015678618985698746789887
Q gi|254780716|r 150 AYNRVENILLSISAKYQNSPCCALLGPDGSGHFVKMI 186 (475)
Q Consensus 150 ~~~~~~piL~~iaak~~~~~cv~y~G~~GsGh~vKMV 186 (475)
.++.++.+++.+.++ +..+-|.-.=.++-.+
T Consensus 148 ~~~~~~~l~~~lGa~------~~~~~~~~HD~~~A~~ 178 (275)
T PRK08507 148 HQERAKEIFSGIGMK------IVFMDSKEHDHHAAYI 178 (275)
T ss_pred HHHHHHHHHHHCCCE------EEECCCHHHHHHHHHH
T ss_conf 999999999981997------8874823368999999
No 27
>PRK08655 prephenate dehydrogenase; Provisional
Probab=99.30 E-value=5.6e-09 Score=85.70 Aligned_cols=212 Identities=17% Similarity=0.273 Sum_probs=142.0
Q ss_pred EEEEE-ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 05698-15711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 5 DIGII-GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 5 ~IGiI-GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
.|++| |-|.||+=+|+.|...||+|.++.|+.++.++..++.. +..+.+..+++ +..++|+++||- ..+.
T Consensus 2 kI~IIGG~G~MG~~Fa~~f~~sGyeV~I~gRd~~k~~~va~~LG-----v~~~~~~~e~~---~~advVIvsVPI-~~T~ 72 (441)
T PRK08655 2 KISIIGGTGGLGKWFARFLKDKGYEVIVWGRDPKKGKEVAKELG-----VEYASDNIDAA---KDGDIVIVSVPI-NVTE 72 (441)
T ss_pred EEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHC-----CCCCCCHHHHH---HCCCEEEEECCH-HHHH
T ss_conf 79999479817799999998679889998157313567888738-----62224478897---249999998488-9999
Q ss_pred HHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECC-CCCCCCCCCCCCCE-EEE--EC-CHHHHHHHHHHH
Q ss_conf 99999972078998999679865789999999998479943067-54676000356843-788--45-489998889999
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGI-GVSGGVKGARSGAS-LMV--GG-NEKAYNRVENIL 158 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~-pVSGG~~gA~~G~s-lMv--GG-~~~~~~~~~piL 158 (475)
+|+.++.|.|.++.+++|.+..--.-.... .+....++.+++. |+-|-..+...|.. +++ .| +.+-|..+..+|
T Consensus 73 ~VI~~laP~l~~~~lL~DitSvK~~p~~aM-l~~~~~~~~viglHPMFGP~v~sl~gQvVVvcP~~~~~~~~~~~l~~~l 151 (441)
T PRK08655 73 DVIREVAPHVKEGSLLMDVTSVKERPVEAM-KEFAPEGVEILPTHPMFGPRTPSLRGQVVILTPTEKRSNPWFPKVRNFL 151 (441)
T ss_pred HHHHHHHCCCCCCCEEEECCCCCHHHHHHH-HHHCCCCCCEECCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHH
T ss_conf 999997424899969998310417799999-9756578877454888799986657888999638987717799999999
Q ss_pred HHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHH
Q ss_conf 98750156786189856987467898877678788899989999999964289978999999860688443079999999
Q gi|254780716|r 159 LSISAKYQNSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKNPLEISHLFSKWDTGKLSSYLIKITAE 238 (475)
Q Consensus 159 ~~iaak~~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~~i~~vf~~w~~~~~~syLl~i~~~ 238 (475)
+.-+++ +..+-|.-.-..+-.| -|.-. +..++=+.++-+ ++.+.+++.+. .++...-.|.+...
T Consensus 152 ~~~Ga~------v~~~tpeEHDr~MavV-Q~LtH--F~~i~~G~~L~~--~~vDi~~~l~f-----sSPiYrL~L~mvGR 215 (441)
T PRK08655 152 EEEGAR------VIITTPEEHDRIMSVV-QGLTH--FAYISIGSTLKR--LGIDIKESRKF-----ASPIYELMIDIIAR 215 (441)
T ss_pred HHCCCE------EEECCHHHHHHHHHHH-HHHHH--HHHHHHHHHHHH--HCCCHHHHHHH-----CCCHHHHHHHHHHH
T ss_conf 977988------9994889986760999-99999--999999999988--19999999753-----79089999999999
Q ss_pred HHHH
Q ss_conf 9974
Q gi|254780716|r 239 ILSS 242 (475)
Q Consensus 239 il~~ 242 (475)
++.+
T Consensus 216 l~aQ 219 (441)
T PRK08655 216 ILGQ 219 (441)
T ss_pred HHCC
T ss_conf 8626
No 28
>PRK06928 pyrroline-5-carboxylate reductase; Reviewed
Probab=99.27 E-value=7.2e-08 Score=77.56 Aligned_cols=241 Identities=17% Similarity=0.223 Sum_probs=139.8
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCC----EEEEEECCH-HHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEE
Q ss_conf 998805698157111688999997898----599973998-999999971221127840328989998605778899997
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGF----RLAVYNKDF-ELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMM 75 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~----~V~vydr~~-~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~ 75 (475)
|+| |||||.|+||.+|+.-|+++|. ++.++++++ ++.+.+.+... ...+.+.++++... ++|+++
T Consensus 1 M~k--I~fIG~GnMg~Aii~Gll~~~~~~~~~i~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~---dvIila 70 (275)
T PRK06928 1 MEK--IGFIGYGSMADMIATKLLETEVITPEEIILYSRSENEHFKQLYDKYP-----TVALASNEELFTKC---DHSFIC 70 (275)
T ss_pred CCE--EEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHCC-----CEEECCHHHHHHHC---CEEEEE
T ss_conf 988--99986789999999999978999963699978993899999998749-----53637779998549---989999
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEE---CCHHHHH
Q ss_conf 6990699999999972078998999679865789999999998479943067546760003568437884---5489998
Q gi|254780716|r 76 VTDGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGVKGARSGASLMVG---GNEKAYN 152 (475)
Q Consensus 76 vp~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~~gA~~G~slMvG---G~~~~~~ 152 (475)
|+. +++.+|++++.+.+.++.+||-.-..-.-+..+ +....+=++. ||- .+.....|.+.... -+++.-+
T Consensus 71 VKP-~~~~~vl~~i~~~~~~~~~iISi~AGi~i~~l~--~~~~~~vvRv--MPN--tpa~vg~Gvt~~~~~~~~~~~~~~ 143 (275)
T PRK06928 71 VPP-LAVLPLMKDCAPVLTPDRHVVSIAAGVSLDDLL--EITPGQVSRL--IPS--LTSAVGVGTSLVAHAETVAEENKS 143 (275)
T ss_pred ECH-HHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHH--HHCCCCEEEE--ECC--CCHHHCCCEEEEECCCCCCHHHHH
T ss_conf 785-879999999765327996899956999899999--7579983797--137--327767842899628989999999
Q ss_pred HHHHHHHHHHCCCCCCCEEEEECC---------CCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf 889999987501567861898569---------8746-789887767878889998999999996428997899999986
Q gi|254780716|r 153 RVENILLSISAKYQNSPCCALLGP---------DGSG-HFVKMIHNGIEYANMQLIADIYGILRDSLNKNPLEISHLFSK 222 (475)
Q Consensus 153 ~~~piL~~iaak~~~~~cv~y~G~---------~GsG-h~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~~i~~vf~~ 222 (475)
.++.+|+.++. +.++-+ +||| -|+ |-.++.++++- .+. .+++.++-.++.
T Consensus 144 ~v~~lf~~~G~-------v~~v~E~~~d~~TalsGSGPAyv--------~~~~eal~~a~--v~~-~gl~~~~A~~l~-- 203 (275)
T PRK06928 144 RLEELLSAFSH-------VMTIREENMDIASNLTSSSPGFI--------AAIFEEFAEAA--VRN-SSLSDEEAFQFL-- 203 (275)
T ss_pred HHHHHHHHCCC-------EEEECHHHHHHHHHHHCCHHHHH--------HHHHHHHHHHH--HHH-CCCCHHHHHHHH--
T ss_conf 99999985797-------13305899889998836399999--------99999999999--996-799999999999--
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf 0688443079999999997405679995200102333658716778988775178885146777888775
Q gi|254780716|r 223 WDTGKLSSYLIKITAEILSSSDTITGMPIIDVICDKASQKGTGIRSIIEGHKLSSSMTITETAIFARNLS 292 (475)
Q Consensus 223 w~~~~~~syLl~i~~~il~~k~~~~g~~lid~i~d~~~~kgTg~Wt~~~a~~lgvp~p~i~~av~aR~~S 292 (475)
...+.=++..+... +.+.-+.+..+....||.-- ...+|+.+ .+-|...+..+..-
T Consensus 204 -------~~t~~Gaa~ll~~~----~~~~~~L~~~V~SPgGTT~a-Gl~~Le~~--~~~~~~~~~~aa~k 259 (275)
T PRK06928 204 -------NFALAGTGKLLVEK----DYTFAGTIDRVATKGGITAE-GAEVIQAQ--LPQFFDELLDRTQK 259 (275)
T ss_pred -------HHHHHHHHHHHHHC----CCCHHHHHHHCCCCCCHHHH-HHHHHHHH--HHHHHHHHHHHHHH
T ss_conf -------99999999999863----97999999818798806999-99999864--49999999999999
No 29
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=99.26 E-value=7.3e-10 Score=92.24 Aligned_cols=163 Identities=18% Similarity=0.268 Sum_probs=114.7
Q ss_pred CCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 88056981571116889999978985999739989999999712211278403289899986057788999976990699
Q gi|254780716|r 3 QADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 3 k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
...|+|+|+|.||+-+|+-|.++|+.|.+|+++.+......+... ++....+...+..+....++|+++||- .++
T Consensus 3 ~~~v~IvG~GliG~s~a~~l~~~g~~v~i~g~d~~~~~~~~a~~l----gv~d~~~~~~~~~~~~~aDlVivavPi-~~~ 77 (279)
T COG0287 3 SMKVGIVGLGLMGGSLARALKEAGLVVRIIGRDRSAATLKAALEL----GVIDELTVAGLAEAAAEADLVIVAVPI-EAT 77 (279)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHC----CCCHHHCCCHHHHHCCCCCEEEEECCH-HHH
T ss_conf 648999877467799999999769847997247746778776635----853010011555413569989995778-899
Q ss_pred HHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECC-CCCCCC--CCCCCCC-EE-EEEC--CHHHHHHHH
Q ss_conf 999999972078998999679865789999999998479943067-546760--0035684-37-8845--489998889
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGI-GVSGGV--KGARSGA-SL-MVGG--NEKAYNRVE 155 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~-pVSGG~--~gA~~G~-sl-MvGG--~~~~~~~~~ 155 (475)
.+++.++.|.+++|.+|.|.|++--.-.....+...+.. +|++. |+-|++ .+-..+. .+ +++. +++.+++++
T Consensus 78 ~~~l~~l~~~l~~g~iv~Dv~S~K~~v~~a~~~~~~~~~-~~vg~HPM~G~~~~~~lf~~~~~vltp~~~~~~~~~~~~~ 156 (279)
T COG0287 78 EEVLKELAPHLKKGAIVTDVGSVKSSVVEAMEKYLPGDV-RFVGGHPMFGPEADAGLFENAVVVLTPSEGTEKEWVEEVK 156 (279)
T ss_pred HHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCC-EEEECCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHH
T ss_conf 999998630379998897364201789999997466777-0782189998743112337967999479998789999999
Q ss_pred HHHHHHHCCCCCCCEEEEECCC
Q ss_conf 9999875015678618985698
Q gi|254780716|r 156 NILLSISAKYQNSPCCALLGPD 177 (475)
Q Consensus 156 piL~~iaak~~~~~cv~y~G~~ 177 (475)
.++++..++ +.++-+.
T Consensus 157 ~~~~~~ga~------~v~~~~e 172 (279)
T COG0287 157 RLWEALGAR------LVEMDAE 172 (279)
T ss_pred HHHHHCCCE------EEECCHH
T ss_conf 999974988------9986888
No 30
>PRK12491 pyrroline-5-carboxylate reductase; Reviewed
Probab=99.24 E-value=9.5e-08 Score=76.67 Aligned_cols=246 Identities=15% Similarity=0.156 Sum_probs=139.1
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEEC
Q ss_conf 998805698157111688999997898----5999739989999999712211278403289899986057788999976
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGF----RLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMV 76 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~----~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~v 76 (475)
|+| +|||||.|+||.+|+.-|+++|+ ++.++||++++.+.+.++. ++..+.+..+.++. +++|+++|
T Consensus 1 M~k-kI~fIG~GnMg~Aii~Gl~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----~~~~~~~~~e~~~~---~Dii~LaV 71 (272)
T PRK12491 1 MNK-QIGFIGCGNMGIAMIGGMINKNIVSPDQIICSDLNVSNLKNASDKY-----GITITTNNNEVANS---ADILILSI 71 (272)
T ss_pred CCC-EEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHC-----CCEEECCHHHHHHH---CCEEEEEE
T ss_conf 998-6999856799999999999788989676999697999999999971-----97886687999731---99999995
Q ss_pred CCHHHHHHHHHHHHHCCCCCCEEEEC-CCCCHHHHHHHHHHHHHCCCCEEC-CCCCCCCCCCCCCCEEEEEC---CHHHH
Q ss_conf 99069999999997207899899967-986578999999999847994306-75467600035684378845---48999
Q gi|254780716|r 77 TDGDPVDQLIDKLKPLLSPEDILLDG-GNSHFCDTQIRSLQLSEKGIYFIG-IGVSGGVKGARSGASLMVGG---NEKAY 151 (475)
Q Consensus 77 p~g~~v~~vi~~l~~~l~~g~iiID~-sts~~~~t~~~~~~l~~kgi~fid-~pVSGG~~gA~~G~slMvGG---~~~~~ 151 (475)
+. +.+.+|+.++.+.+.++.+||-. .....+ .+.+.+ ..+...+- ||= .+.--..|.+.+..+ +++..
T Consensus 72 KP-~~~~~vl~~l~~~~~~~~lviSi~AGi~i~---~l~~~l-~~~~~vvR~MPN--~~a~v~~g~t~i~~~~~~~~~~~ 144 (272)
T PRK12491 72 KP-DLYSSVINQIKDQIKNDVIVVTIAAGKSIK---STENEF-DRKLKVIRVMPN--TPVLVGEGMSALCFNEMVTEKDI 144 (272)
T ss_pred CH-HHHHHHHHHHHHHCCCCCEEEEEECCCCHH---HHHHHH-CCCCCEEEECCC--HHHHHCCCCEEEECCCCCCHHHH
T ss_conf 77-899999999865526991899984899989---999981-899857997897--69996369657834998999999
Q ss_pred HHHHHHHHHHHCCC-CCCCEE-EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC
Q ss_conf 88899999875015-678618-9856987467898877678788899989999999964289978999999860688443
Q gi|254780716|r 152 NRVENILLSISAKY-QNSPCC-ALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKNPLEISHLFSKWDTGKLS 229 (475)
Q Consensus 152 ~~~~piL~~iaak~-~~~~cv-~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~~i~~vf~~w~~~~~~ 229 (475)
+.++.+|+.++.-. .++..+ ....=+|||- +--|-.++.+.++- . ..+++.++-.++..
T Consensus 145 ~~v~~lf~~~G~~~~~~E~~~d~~TalsGSgP-------Ay~~~~~eal~~a~--v--~~Gl~~~~A~~l~~-------- 205 (272)
T PRK12491 145 KEVLNIFNIFGQTEVVNEKLMDVVTSISGSSP-------AYVYMFIEAMADAA--V--LGGMPRKQAYKFAA-------- 205 (272)
T ss_pred HHHHHHHHCCCEEEEECCCCHHHHHHHHCCHH-------HHHHHHHHHHHHHH--H--HCCCCHHHHHHHHH--------
T ss_conf 99999972476499963531101457834759-------99999999999999--9--84989999999999--------
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf 0799999999974056799952001023336587167789887751788851467778
Q gi|254780716|r 230 SYLIKITAEILSSSDTITGMPIIDVICDKASQKGTGIRSIIEGHKLSSSMTITETAIF 287 (475)
Q Consensus 230 syLl~i~~~il~~k~~~~g~~lid~i~d~~~~kgTg~Wt~~~a~~lgvp~p~i~~av~ 287 (475)
.++.=+++.+.+. +...-+.+..+....||. -.....|+.+-=-..|..|+.
T Consensus 206 -~~~~G~~~ll~~~----~~~p~~L~~~V~SpgGtT-~aGl~~Le~~g~~~~i~~Ai~ 257 (272)
T PRK12491 206 -QAVLGSAKMVLET----GIHPGELKDMVCSPGGTT-IEAVATLEEKGLRTAIISAMK 257 (272)
T ss_pred -HHHHHHHHHHHHC----CCCHHHHHHHCCCCCHHH-HHHHHHHHHCCHHHHHHHHHH
T ss_conf -9999999999864----999999998278997879-999999998882999999999
No 31
>PRK07680 late competence protein ComER; Validated
Probab=99.22 E-value=1.2e-07 Score=75.79 Aligned_cols=257 Identities=19% Similarity=0.205 Sum_probs=142.1
Q ss_pred EEEEEECCHHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHH
Q ss_conf 05698157111688999997898----59997399899999997122112784032898999860577889999769906
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGF----RLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGD 80 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~----~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~ 80 (475)
+|||||.|+||.+|++.|++.|. ++.++||++++...+.+... ++..+.+..+.+... ++|+++|.. +
T Consensus 2 kI~fIG~GnMg~Aii~gl~~~~~~~~~~i~i~~r~~~~~~~l~~~~~----~i~~~~~~~~~~~~~---dvIiLaVKP-q 73 (273)
T PRK07680 2 NIGFIGTGNMGTILIEAFLESRAVKPSCLTITNRTPAKAYHIKEKYP----SIHVAKTIEEVIEQS---ELIFICVKP-L 73 (273)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCC----CEEEECCHHHHHHCC---CEEEEECCH-H
T ss_conf 89998769999999999997799894569998899899999998769----908868889998409---989996488-8
Q ss_pred HHHHHHHHHHHCCCCCCEEEECCC-CCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEE---ECCHHHHHHHHH
Q ss_conf 999999999720789989996798-6578999999999847994306754676000356843788---454899988899
Q gi|254780716|r 81 PVDQLIDKLKPLLSPEDILLDGGN-SHFCDTQIRSLQLSEKGIYFIGIGVSGGVKGARSGASLMV---GGNEKAYNRVEN 156 (475)
Q Consensus 81 ~v~~vi~~l~~~l~~g~iiID~st-s~~~~t~~~~~~l~~kgi~fid~pVSGG~~gA~~G~slMv---GG~~~~~~~~~p 156 (475)
++.+|+.++.+.+.++.+||-.-- ...+ ++.+.+..+-++.+ |- .+.....|.+.+. .-+++..+.++.
T Consensus 74 ~~~~vl~~i~~~~~~~~~iISi~AGisi~---~l~~~~~~~vvR~M--PN--~~~~~~~G~t~~~~~~~~~~~~~~~v~~ 146 (273)
T PRK07680 74 DIYPLLKKLAPHFSDEKCLVSITSPISPE---QLETLVPCQVARII--PS--ITNRALSGASLVTFGNNCSEEWQQKLLR 146 (273)
T ss_pred HHHHHHHHHHHHCCCCCEEEEECCCCCHH---HHHHHCCCCCEEEE--CC--CCHHHCCCEEEEEECCCCCHHHHHHHHH
T ss_conf 89999999886347884899955888899---99974799815886--78--8602143327997589999999999999
Q ss_pred HHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHH
Q ss_conf 999875015678618985698746789887767878--889998999999996428997899999986068844307999
Q gi|254780716|r 157 ILLSISAKYQNSPCCALLGPDGSGHFVKMIHNGIEY--ANMQLIADIYGILRDSLNKNPLEISHLFSKWDTGKLSSYLIK 234 (475)
Q Consensus 157 iL~~iaak~~~~~cv~y~G~~GsGh~vKMVhNgIey--~~mq~iaE~~~~l~~~~~~~~~~i~~vf~~w~~~~~~syLl~ 234 (475)
+|+.++.- .++-+.----+.=+.=-|--| -.++.+.++- .++ .|++.++-.++..+ .+.
T Consensus 147 lf~~~G~~-------~~i~E~~~d~~talsGSGPAy~~~~~eal~~a~--v~~-~Gl~~~~A~~l~~~---------t~~ 207 (273)
T PRK07680 147 LFKNISTP-------LVIEEDITRVASDIVSCGPAFFSYLLQRFINAA--VDK-TNITKEEATTLVTE---------MVV 207 (273)
T ss_pred HHHHCCEE-------EEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHH--HHH-CCCCHHHHHHHHHH---------HHH
T ss_conf 99738779-------998578876788861684899999999999999--998-59999999999999---------999
Q ss_pred HHHHHHHHCCCCCCCCCHHHCCCC-CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999740567999520010233-365871677898877517888514677788877500577999875
Q gi|254780716|r 235 ITAEILSSSDTITGMPIIDVICDK-ASQKGTGIRSIIEGHKLSSSMTITETAIFARNLSLYRDESKKMQS 303 (475)
Q Consensus 235 i~~~il~~k~~~~g~~lid~i~d~-~~~kgTg~Wt~~~a~~lgvp~p~i~~av~aR~~S~~k~~R~~~~~ 303 (475)
=+++.+... +.. ...+.|. +...|| +-.....||-+ ++-+....+.|..-.+++.-.+.++
T Consensus 208 G~a~ll~~~----~~~-~~~L~~~V~SPgGt-T~~gl~~Le~~--~~~~f~~a~~~a~~r~~e~~~~~~~ 269 (273)
T PRK07680 208 GLGKLLEKG----LYT-LPTLQEKVCVKGGV-TGEGIRVLEEH--VGDMFHKLFERTHEKFDEDLEKVKQ 269 (273)
T ss_pred HHHHHHHCC----CCC-HHHHHHCCCCCCHH-HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999827----989-89999807899725-99999999972--5999999999999999999999999
No 32
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=99.20 E-value=8.8e-08 Score=76.92 Aligned_cols=243 Identities=15% Similarity=0.179 Sum_probs=138.7
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECC
Q ss_conf 99880569815711168899999789---859997399899999997122112784032898999860577889999769
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKG---FRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVT 77 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G---~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp 77 (475)
|++ +|||||.|+||++|+.-|+++| +++.++||++++.+.+.++. ++..+.+..+.++.. ++|+++|+
T Consensus 1 mm~-kI~~IG~G~Mg~Aii~gl~~~~~~~~~i~v~~r~~~~~~~l~~~~-----~v~~~~~~~~~~~~~---diIiLaVK 71 (267)
T PRK11880 1 MMK-KIGFIGGGNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEY-----GVRAATDNQEAAQEA---DVVVLAVK 71 (267)
T ss_pred CCC-EEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHH-----CCEEECCHHHHHHCC---CEEEEEEC
T ss_conf 998-799986689999999999977989452899779999999999973-----967857869887219---99999728
Q ss_pred CHHHHHHHHHHHHHCCCCCCEEEEC-CCCCHHHHHHHHHHHHHCCCCEE-CCCCCCCCCCCCCCCEEEEEC---CHHHHH
Q ss_conf 9069999999997207899899967-98657899999999984799430-675467600035684378845---489998
Q gi|254780716|r 78 DGDPVDQLIDKLKPLLSPEDILLDG-GNSHFCDTQIRSLQLSEKGIYFI-GIGVSGGVKGARSGASLMVGG---NEKAYN 152 (475)
Q Consensus 78 ~g~~v~~vi~~l~~~l~~g~iiID~-sts~~~~t~~~~~~l~~kgi~fi-d~pVSGG~~gA~~G~slMvGG---~~~~~~ 152 (475)
. +.+++|++++.+.++ .+||-. .....+. +.+.+. .....+ -||- .+.-...|.+.+..+ +++..+
T Consensus 72 P-~~~~~vl~~l~~~~~--~~iISv~AGi~i~~---l~~~l~-~~~~ivR~MPN--~~~~v~~G~t~i~~~~~~~~~~~~ 142 (267)
T PRK11880 72 P-QVMEDVLSELKGSLD--KLVVSIAAGITLAR---LERALG-ADLPVVRAMPN--TPALVGAGMTALCANALVSEEQRA 142 (267)
T ss_pred H-HHHHHHHHHHHHHHC--CEEEEECCCCCHHH---HHHHHC-CCCHHHHCCCC--HHHHHCCCCEEEECCCCCCHHHHH
T ss_conf 7-899999999876508--78999169999999---998863-68703420874--899970786466259999999999
Q ss_pred HHHHHHHHHHCCC--CCCCEE-EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC
Q ss_conf 8899999875015--678618-9856987467898877678788899989999999964289978999999860688443
Q gi|254780716|r 153 RVENILLSISAKY--QNSPCC-ALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKNPLEISHLFSKWDTGKLS 229 (475)
Q Consensus 153 ~~~piL~~iaak~--~~~~cv-~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~~i~~vf~~w~~~~~~ 229 (475)
.++.+|+.++.-. +++..+ ...+=+|||- +--|-.++++.++- .+ .|++.++-.++-
T Consensus 143 ~v~~lf~~~G~~~~v~~E~~~d~~TalsGsGP-------Ay~~~~~eal~~a~--v~--~Gl~~~~A~~l~--------- 202 (267)
T PRK11880 143 FALELLSAVGEVVWVDDESQMDAVTAVSGSGP-------AYVFLFIEALADAG--VK--LGLPRETARKLA--------- 202 (267)
T ss_pred HHHHHHHHCCCEEEECCHHCCCHHHHHHCCCH-------HHHHHHHHHHHHHH--HH--CCCCHHHHHHHH---------
T ss_conf 99999972586799884210221134517717-------99999999999999--98--699799999999---------
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf 079999999997405679995200102333658716778988775178885146777
Q gi|254780716|r 230 SYLIKITAEILSSSDTITGMPIIDVICDKASQKGTGIRSIIEGHKLSSSMTITETAI 286 (475)
Q Consensus 230 syLl~i~~~il~~k~~~~g~~lid~i~d~~~~kgTg~Wt~~~a~~lgvp~p~i~~av 286 (475)
..++.=++..+.+. +.+ .+.+.|.+..+|--.-....+|+-+-=-..+..|+
T Consensus 203 ~qt~~G~a~ll~~~----~~~-p~~L~~~V~SpgGtT~~gl~~Le~~g~~~~i~~Ai 254 (267)
T PRK11880 203 AQTVLGAAKLLLES----GEH-PAELRDNVTSPGGTTIAALRVLEEGGFRAAVIEAV 254 (267)
T ss_pred HHHHHHHHHHHHHC----CCC-HHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 99999999999872----999-99999836799653999999999888499999999
No 33
>pfam03721 UDPG_MGDP_dh_N UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain. The UDP-glucose/GDP-mannose dehydrogenaseses are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate.
Probab=99.17 E-value=1.5e-09 Score=90.02 Aligned_cols=113 Identities=16% Similarity=0.203 Sum_probs=89.0
Q ss_pred EEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCC-------------CCCCCEECCCHHHHHHHCCCCCE
Q ss_conf 05698157111688999997898599973998999999971221-------------12784032898999860577889
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISG-------------LSQKVIVTKNLEQMVEAVCKPRK 71 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~-------------~~~~~~~~~s~~e~v~~l~~pr~ 71 (475)
+|+|||||-.|.++|..|+++|++|.+||.++++++.+.+.... ...+.....+..+.+ ..+++
T Consensus 2 kI~ViGlGyVGl~~a~~la~~G~~V~g~D~d~~~v~~ln~g~~p~~E~~l~~~l~~~~~~~~~~~~~~~~~i---~~~d~ 78 (185)
T pfam03721 2 RIAVIGLGYVGLPTAVCLAEIGHDVVGVDINQSKIDKLNNGKIPIYEPGLEELLKANVSGRLRFTTDVAEAI---KEADV 78 (185)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEECCHHHHH---HHCCE
T ss_conf 799989787489999999948993999979989999986268974675889999873408969987879988---44989
Q ss_pred EEEECCCH---------HHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHC
Q ss_conf 99976990---------69999999997207899899967986578999999999847
Q gi|254780716|r 72 ILMMVTDG---------DPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEK 120 (475)
Q Consensus 72 Iil~vp~g---------~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~k 120 (475)
||+|||.+ ..+.+++..+.+.+++++++|--||..|-.+++..+.+.++
T Consensus 79 i~I~VpTP~~~~~~~d~s~l~~~~~~i~~~l~~~~liii~STVppGtt~~~~~~l~~~ 136 (185)
T pfam03721 79 IFIAVPTPSKKGGAPDLTYVESAARTIGPVLKKGKVVVVKSTVPPGTTEEVVKPILEK 136 (185)
T ss_pred EEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHH
T ss_conf 9997368765576766359999999997446799899991899988689999999997
No 34
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed
Probab=99.16 E-value=2.7e-07 Score=73.30 Aligned_cols=249 Identities=14% Similarity=0.134 Sum_probs=143.3
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCC----EEEEEECCHH-HHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEE
Q ss_conf 998805698157111688999997898----5999739989-99999971221127840328989998605778899997
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGF----RLAVYNKDFE-LTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMM 75 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~----~V~vydr~~~-~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~ 75 (475)
|+..+|||||.|+||.+|+..|.+.++ ++.+++|+.+ +.+.+.++. .+..+.+..+.++. +++|+++
T Consensus 1 m~mm~I~fIG~GnMg~Aii~gl~~~~~~~~~~i~v~~r~~~~~~~~l~~~~-----~v~~~~~~~~~~~~---~diI~La 72 (279)
T PRK07679 1 MSIQNISFLGAGSIAEAIIGGLLHANVVKGEQITVSNRSNETRLQELHQKY-----GVKGTHNKKELLTD---ANILFLA 72 (279)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHH-----CCEEECCHHHHHHH---CCEEEEE
T ss_conf 997889998768999999999997879997579997898499999999971-----96663777999844---9999995
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEE-CCCCCCCCCCCCCCCEEEE-E--CCHHHH
Q ss_conf 69906999999999720789989996798657899999999984799430-6754676000356843788-4--548999
Q gi|254780716|r 76 VTDGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFI-GIGVSGGVKGARSGASLMV-G--GNEKAY 151 (475)
Q Consensus 76 vp~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fi-d~pVSGG~~gA~~G~slMv-G--G~~~~~ 151 (475)
|+. +.+.+|+..+.+.+.++.+||-.-..-. ..++.+.+. .+...+ -||= .+..-..|.+.+. + -+++..
T Consensus 73 VKP-~~~~~v~~~i~~~~~~~~~iISi~AGi~--~~~l~~~l~-~~~~ivR~MPN--~~~~vg~g~t~i~~~~~~~~~~~ 146 (279)
T PRK07679 73 MKP-KDVAEALTPFKEYIHNNVLIISLLAGVS--THSIRNLLQ-KDVPIIRAMPN--TSAAILKSATAISPSKHATAEHI 146 (279)
T ss_pred CCH-HHHHHHHHHHHHHCCCCCEEEEECCCCC--HHHHHHHCC-CCCCEEEECCC--HHHHHHCCCEEECCCCCCCHHHH
T ss_conf 278-9999999998754589929999747888--999997529-99857983597--67885057735527999999999
Q ss_pred HHHHHHHHHHHCCC-CCCCEE-EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC
Q ss_conf 88899999875015-678618-9856987467898877678788899989999999964289978999999860688443
Q gi|254780716|r 152 NRVENILLSISAKY-QNSPCC-ALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKNPLEISHLFSKWDTGKLS 229 (475)
Q Consensus 152 ~~~~piL~~iaak~-~~~~cv-~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~~i~~vf~~w~~~~~~ 229 (475)
+.++.+|+.++.-. -++..+ ...+=+|||- +--|-.++++.++- . ..|++.++-.+. -
T Consensus 147 ~~v~~lf~~~G~~~~v~E~~~d~~TalsGSgP-------Af~~~~~eal~~a~--~--~~Gl~~~~A~~l---------~ 206 (279)
T PRK07679 147 QTAKALFETIGLVSVVEEEDMHAVTALSGSGP-------AYIYYVVEAMEEAA--K--KIGLKEDVAKSL---------I 206 (279)
T ss_pred HHHHHHHHHCCEEEEECHHHCCCHHHEECCHH-------HHHHHHHHHHHHHH--H--HCCCCHHHHHHH---------H
T ss_conf 99999996178599954333032100016648-------99999999999999--9--839999999999---------9
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf 07999999999740567999520010233365871677898877517888514677788
Q gi|254780716|r 230 SYLIKITAEILSSSDTITGMPIIDVICDKASQKGTGIRSIIEGHKLSSSMTITETAIFA 288 (475)
Q Consensus 230 syLl~i~~~il~~k~~~~g~~lid~i~d~~~~kgTg~Wt~~~a~~lgvp~p~i~~av~a 288 (475)
..++.=+++.+...+. -.+.+.|.+..+|=-.+.....|+.+-=-.++..|+.+
T Consensus 207 ~~t~~G~a~ll~~~~~-----~p~~L~~~V~SpgGtT~~gl~~Le~~~~~~~i~~Av~a 260 (279)
T PRK07679 207 LQTMIGAAEMLKASEK-----HPSILRKEITSPGGTTEAGIEVLQEHKFQQALISCITQ 260 (279)
T ss_pred HHHHHHHHHHHHHCCC-----CHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf 9999999999984699-----99999984689946599999999988819999999999
No 35
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=99.12 E-value=5.6e-08 Score=78.34 Aligned_cols=193 Identities=16% Similarity=0.192 Sum_probs=130.0
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH---HHHC-----------CCCCCCCEECCCHHHHHHHC
Q ss_conf 998805698157111688999997898599973998999999---9712-----------21127840328989998605
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVF---IKKI-----------SGLSQKVIVTKNLEQMVEAV 66 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l---~~~~-----------~~~~~~~~~~~s~~e~v~~l 66 (475)
|-| +|++||-|.||..+|..++.+||+|.+||++++..+.+ ++.. .....++..+.+++|.++
T Consensus 1 MIk-kVAVIGAGvMGsGwAa~FA~aG~~V~L~Dp~peA~~ki~~~l~~a~~al~~L~~~~l~~~grL~~~~sL~eAV~-- 77 (489)
T PRK07531 1 MIM-KAACIGGGVIGGGWAARFLLNGWDVAVFDPHPEAERIIGEVLANARRALPGLTDAPLPPEGRLSFCASLAEAVA-- 77 (489)
T ss_pred CCC-EEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHC--
T ss_conf 976-79998718868999999995799699994887899999999999999877532035564677686388999974--
Q ss_pred CCCCEEEEECCCHHHHHHHH-HHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCC----CCEECCCCCCCCCCCCCCCE
Q ss_conf 77889999769906999999-99972078998999679865789999999998479----94306754676000356843
Q gi|254780716|r 67 CKPRKILMMVTDGDPVDQLI-DKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKG----IYFIGIGVSGGVKGARSGAS 141 (475)
Q Consensus 67 ~~pr~Iil~vp~g~~v~~vi-~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kg----i~fid~pVSGG~~gA~~G~s 141 (475)
..+.|+=++|-.-.++.-+ .+|-..+ +.+.||-.+||.+.-|. +.+.++... .||.-.|-- =|.
T Consensus 78 -dADlVqEaVPE~LdIKq~vf~eLd~~~-~~~aIiASsTSgl~~S~-l~~~~~~peR~iv~HpfNPp~L--------~PL 146 (489)
T PRK07531 78 -GADWIQESVPERLDLKHKVLAEIEAAA-RPDALIGSSTSGFKPSE-LQEGMTHPERIFVAHPFNPVYL--------LPL 146 (489)
T ss_pred -CCCEEEECCCCCHHHHHHHHHHHHHHC-CCCCEEEECCCCCCHHH-HHHHCCCCCEEEEECCCCCCCC--------CCE
T ss_conf -799999878566999999999999767-99838985366588999-9865589550688434687344--------762
Q ss_pred E-EEEC---CHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
Q ss_conf 7-8845---48999888999998750156786189856987467898877678788899989999999964289978999
Q gi|254780716|r 142 L-MVGG---NEKAYNRVENILLSISAKYQNSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKNPLEIS 217 (475)
Q Consensus 142 l-MvGG---~~~~~~~~~piL~~iaak~~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~~i~ 217 (475)
+ .|+| ++++.+++..+++.++.+ ..++-..=-||- -|=+.+ -++-|++.+.+.+ --+.++|-
T Consensus 147 VEvV~g~~T~~~~v~~a~~~~~~iG~~------Pv~v~kEi~Gfi----~nRLq~---Al~rEAl~Lv~~G-iat~ediD 212 (489)
T PRK07531 147 VELVGGGKTSPETIERAKEILREIGMK------PVHIAKEIDAHV----GDRLLE---AVWREALWLVKDG-IATTEEID 212 (489)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHCCCE------EEEEEEEHHHHH----HHHHHH---HHHHHHHHHHHCC-CCCHHHHH
T ss_conf 798168888999999999999982984------369700007778----888999---9999999998779-76789887
Q ss_pred HHHH
Q ss_conf 9998
Q gi|254780716|r 218 HLFS 221 (475)
Q Consensus 218 ~vf~ 221 (475)
++..
T Consensus 213 ~ai~ 216 (489)
T PRK07531 213 DAIR 216 (489)
T ss_pred HHHH
T ss_conf 9998
No 36
>pfam01210 NAD_Gly3P_dh_N NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus. NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain.
Probab=99.12 E-value=1.3e-09 Score=90.47 Aligned_cols=140 Identities=24% Similarity=0.318 Sum_probs=97.5
Q ss_pred EEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCC--------CCCCCCEECCCHHHHHHHCCCCCEEEEEC
Q ss_conf 0569815711168899999789859997399899999997122--------11278403289899986057788999976
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKIS--------GLSQKVIVTKNLEQMVEAVCKPRKILMMV 76 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~--------~~~~~~~~~~s~~e~v~~l~~pr~Iil~v 76 (475)
+|++||-|.||.+||..|+++|++|.+|.|+++.++.+.+... ...+++....++++.++. .++|+++|
T Consensus 2 KI~IiGaG~wGtAla~~la~n~~~V~l~~r~~~~~~~i~~~~~n~~~lp~~~l~~~i~~~~dl~~a~~~---adiIiiav 78 (159)
T pfam01210 2 KIAVLGAGSWGTALAKVLARNGHEVRLWGRDEELIEEINTTRENVKYLPGIKLPDNLRATTDLEEAIKG---ADIIVLAV 78 (159)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHCCCCCHHCCCCCCCCCEEECCCHHHHHHC---CCEEEEEC
T ss_conf 899999699999999999987998999990436667788669782104786455530542889999837---98999917
Q ss_pred CCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHH-HHHHHHC-CCCEECCCCCC---CCCCCCCCC-EEEEECCHH
Q ss_conf 9906999999999720789989996798657899999-9999847-99430675467---600035684-378845489
Q gi|254780716|r 77 TDGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIR-SLQLSEK-GIYFIGIGVSG---GVKGARSGA-SLMVGGNEK 149 (475)
Q Consensus 77 p~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~-~~~l~~k-gi~fid~pVSG---G~~gA~~G~-slMvGG~~~ 149 (475)
|+ ..++++++++.+++.++.++|.++..-..++..+ .+.+++. +..-+ +-+|| ..+-++.-| ++.++++..
T Consensus 79 ps-~~~~~~~~~i~~~~~~~~~iv~~sKGie~~t~~~~s~i~~~~~~~~~~-~vlsGPs~A~Ev~~~~pta~vias~d~ 155 (159)
T pfam01210 79 PS-QALREVLKQLKGLLSPGAILVSLTKGIEPGTLKLLSEIIEEELPINPI-AVLSGPSHAEEVALGLPTATVVASEDQ 155 (159)
T ss_pred CH-HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCE-EEEECCCHHHHHHCCCCCEEEEECCCH
T ss_conf 48-899999999986557655688875144278875299999987899873-999578649999748981899961994
No 37
>PRK06545 prephenate dehydrogenase; Validated
Probab=99.12 E-value=9.6e-09 Score=84.01 Aligned_cols=165 Identities=18% Similarity=0.237 Sum_probs=115.0
Q ss_pred EEEEEECCHHHHHHHHHHHHCCCEE--EEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 0569815711168899999789859--99739989999999712211278403289899986057788999976990699
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGFRL--AVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~~V--~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
+|.|||+|.||..+|+-|.+.|..+ ++||++++..+...+.+.. . ....++++. +..+++|++|+|-. .+
T Consensus 2 ~V~IiGlGLIGgSlalalk~~g~~~~i~~~d~~~~~l~~A~~~g~i--d--~~~~~~~~~---~~~~DlVvlatPv~-~~ 73 (357)
T PRK06545 2 TVLIVGLGLIGGSLALAIKAAGPDVFIIGYDPSGAQLARALGFGVI--D--ELAEDLARA---AAEADLIVLAVPVD-AT 73 (357)
T ss_pred EEEEEEECHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCC--C--EECCCHHHH---CCCCCEEEECCCHH-HH
T ss_conf 7999977878999999998549976999966999999999868997--7--304887671---56799999949999-99
Q ss_pred HHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECC-CCCCCC----CCCCC----C-CEEEE---ECCHH
Q ss_conf 999999972078998999679865789999999998479943067-546760----00356----8-43788---45489
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGI-GVSGGV----KGARS----G-ASLMV---GGNEK 149 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~-pVSGG~----~gA~~----G-~slMv---GG~~~ 149 (475)
.+++..+. .+.++.+|.|.|.+-- ...+..+.+-.++.+|++. |+.|.+ +.|.. | +.+++ +-+++
T Consensus 74 ~~~l~~l~-~l~~~~ivTDVgSvK~-~I~~~~~~~~~~~~~FVggHPMAGsEksG~~aA~~~LF~~a~~iltP~~~t~~~ 151 (357)
T PRK06545 74 AALLAELA-DLAPGVIVTDVGSVKG-AILAEAEALGLKDVRFVGGHPMAGSHKSGVLAAKAHLFENAPWVLTPDDHVDPE 151 (357)
T ss_pred HHHHHHHH-HCCCCCEEEECCCCHH-HHHHHHHHHCCCCCCEECCCCCCCCCCCCHHHCCHHHHCCCEEEEECCCCCCHH
T ss_conf 99999987-2389978997510079-999999983688886456798264777471226456866981999638999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHH
Q ss_conf 998889999987501567861898569874678988
Q gi|254780716|r 150 AYNRVENILLSISAKYQNSPCCALLGPDGSGHFVKM 185 (475)
Q Consensus 150 ~~~~~~piL~~iaak~~~~~cv~y~G~~GsGh~vKM 185 (475)
++++++.+++.+.++ +..|-+.-.=..+=+
T Consensus 152 ~~~~v~~l~~~lGa~------~~~m~~~eHD~~vA~ 181 (357)
T PRK06545 152 AVAELKDLLSGTGAK------FVVMDAEEHDRATAL 181 (357)
T ss_pred HHHHHHHHHHHCCCE------EEECCHHHHHHHHHH
T ss_conf 999999999975998------998188998899998
No 38
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=99.11 E-value=1e-08 Score=83.82 Aligned_cols=153 Identities=21% Similarity=0.310 Sum_probs=107.6
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCC--------CCCCCCEECCCHHHHHHHCCCCCEE
Q ss_conf 99880569815711168899999789859997399899999997122--------1127840328989998605778899
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKIS--------GLSQKVIVTKNLEQMVEAVCKPRKI 72 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~--------~~~~~~~~~~s~~e~v~~l~~pr~I 72 (475)
|+| |++||-|.||.++|..|+++|++|..|-|+++.++.+.+... ...+++....++++.++. .++|
T Consensus 1 Mmk--I~ViGaGawGtAlA~~la~n~~~V~lw~r~~~~~~~In~~~~n~~ylp~i~L~~nI~~t~dl~~~l~~---ad~i 75 (325)
T PRK00094 1 MMK--IAVLGAGSWGTALAILLARNGHDVVLWGRDPEHAAEINTDRENPRYLPGIKLPDNLRATSDLAEALAD---ADLI 75 (325)
T ss_pred CCE--EEEECCCHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHHHHC---CCEE
T ss_conf 988--99989899999999999978997899983899999999649886568978589983897899999837---9849
Q ss_pred EEECCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHH-HHHHHHHC-CCCEECCCCCCCC----CCCCCCCE-EEEE
Q ss_conf 9976990699999999972078998999679865789999-99999847-9943067546760----00356843-7884
Q gi|254780716|r 73 LMMVTDGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQI-RSLQLSEK-GIYFIGIGVSGGV----KGARSGAS-LMVG 145 (475)
Q Consensus 73 il~vp~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~-~~~~l~~k-gi~fid~pVSGG~----~gA~~G~s-lMvG 145 (475)
++.+|+ +.+.++++++.+++++..++|-++--.-..+.+ ..+.+++. +.+ ..+.+-.|| +-|+.-|+ +.++
T Consensus 76 iiavPs-~~~~~~l~~i~~~i~~~~~li~~tKGle~~t~~~~seii~~~l~~~-~~~~~lsGP~~A~Eva~~~pt~~via 153 (325)
T PRK00094 76 LVAVPS-HAFREVLKQLKPLLRPDAPIVWATKGIEAGTGKLLSEVAEEELPDQ-APLAVLSGPSFAKEVAQGLPTALVIA 153 (325)
T ss_pred EEECCH-HHHHHHHHHHHHHCCCCCEEEEEECCEECCCCCCHHHHHHHHCCCC-CCEEEEECCCHHHHHHCCCCEEEEEC
T ss_conf 994576-9999999999864689974999765562488751999999973999-86799817742999980898399950
Q ss_pred C-CHHHHHHHHHHHHH
Q ss_conf 5-48999888999998
Q gi|254780716|r 146 G-NEKAYNRVENILLS 160 (475)
Q Consensus 146 G-~~~~~~~~~piL~~ 160 (475)
+ +.+.-+.++.+|..
T Consensus 154 s~~~~~~~~~~~lf~~ 169 (325)
T PRK00094 154 STDEELAKEVQQLFHS 169 (325)
T ss_pred CCCHHHHHHHHHHHCC
T ss_conf 7999999999999679
No 39
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=99.09 E-value=8e-08 Score=77.22 Aligned_cols=193 Identities=18% Similarity=0.224 Sum_probs=126.9
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-----------CCC-------CCCCCEECCCHHHH
Q ss_conf 998805698157111688999997898599973998999999971-----------221-------12784032898999
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKK-----------ISG-------LSQKVIVTKNLEQM 62 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~-----------~~~-------~~~~~~~~~s~~e~ 62 (475)
|+-.+|++||.|.||..+|..++.+|++|.+||++++..+...+. +.- ....+....++++
T Consensus 1 m~i~~VaViGaG~mG~~IA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~~dl~~- 79 (282)
T PRK05808 1 MSIQKIGVIGAGTMGNGIAQVCAVAGYDVVMVDISDEAVDRGLATITKSLDRLVKKGKMTEADKEAALARITGTTDLDD- 79 (282)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHH-
T ss_conf 9726899989788999999999957993899979989999999999999999997088642669999952636688889-
Q ss_pred HHHCCCCCEEEEECCCHHHHHHHH-HHHHHCCCCCCEEEECCCCCHHHHHHHHHHHH----HCCCCEECCCC-CCCCCCC
Q ss_conf 860577889999769906999999-99972078998999679865789999999998----47994306754-6760003
Q gi|254780716|r 63 VEAVCKPRKILMMVTDGDPVDQLI-DKLKPLLSPEDILLDGGNSHFCDTQIRSLQLS----EKGIYFIGIGV-SGGVKGA 136 (475)
Q Consensus 63 v~~l~~pr~Iil~vp~g~~v~~vi-~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~----~kgi~fid~pV-SGG~~gA 136 (475)
+..++.|+=+||-.-.+..-+ .+|-+.+.++.|+. ..||...-+ .+++.+. =-|.||...|- .--++
T Consensus 80 ---~~~aDlViEav~E~l~iK~~vf~~le~~~~~~~Ila-SnTSsl~is-~la~~~~~p~R~ig~HffnP~~~~~lVE-- 152 (282)
T PRK05808 80 ---LKDADLVIEAAVENMDIKKKIFAQLDEIAKPEAILA-TNTSSLSIT-ELAAATKRPDKVIGMHFFNPVPVMKLVE-- 152 (282)
T ss_pred ---HCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEE-ECCCCCCHH-HHHHHCCCCHHHCCCCCCCCCCCCCEEE--
T ss_conf ---675999998775634556999999995579984899-758877669-9997729925420556678723371166--
Q ss_pred CCCCEEEEE--CCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
Q ss_conf 568437884--548999888999998750156786189856987467898877678788899989999999964289978
Q gi|254780716|r 137 RSGASLMVG--GNEKAYNRVENILLSISAKYQNSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKNPL 214 (475)
Q Consensus 137 ~~G~slMvG--G~~~~~~~~~piL~~iaak~~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~ 214 (475)
++.| -++++.+++..+++.+... ...+. .-.|. |-|-|.+ -.+.|++.++..+ --+++
T Consensus 153 -----iv~g~~Ts~~~~~~~~~~~~~lgk~------pV~vk-d~pGF----i~NRl~~---a~~~ea~~lv~eG-va~~~ 212 (282)
T PRK05808 153 -----IIRGLATSDATHEAVEALAKKIGKT------PVEVN-NAPGF----VVNRILI---PMINEAIFVLAEG-VATAE 212 (282)
T ss_pred -----EECCCCCCHHHHHHHHHHHHHCCCE------EEEEC-CCCCH----HHHHHHH---HHHHHHHHHHHCC-CCCHH
T ss_conf -----7279999999999999999874984------79981-77750----8999999---9999999999839-99999
Q ss_pred HHHHHHH
Q ss_conf 9999998
Q gi|254780716|r 215 EISHLFS 221 (475)
Q Consensus 215 ~i~~vf~ 221 (475)
+|-.++.
T Consensus 213 dID~~~~ 219 (282)
T PRK05808 213 DIDEGMK 219 (282)
T ss_pred HHHHHHH
T ss_conf 9999877
No 40
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=99.06 E-value=9.6e-08 Score=76.62 Aligned_cols=191 Identities=14% Similarity=0.203 Sum_probs=128.0
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCC------------------CCCCCCEECCCHHHHHHH
Q ss_conf 80569815711168899999789859997399899999997122------------------112784032898999860
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKIS------------------GLSQKVIVTKNLEQMVEA 65 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~------------------~~~~~~~~~~s~~e~v~~ 65 (475)
++||+||.|.||..+|..++.+|++|.+||++++..+...+.-. .....+..+.++++.
T Consensus 3 ~~VaViGaG~mG~giA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~~l~~~~~~g~~~~~~~~~~~~ri~~~~~l~~a--- 79 (308)
T PRK06129 3 GSIAIVGAGLIGRAWAIVFARAGHRVRLWDADPAALAAAPAYIAGRLEDLAAFDLLDGESPDAVLARIRATDSLADA--- 79 (308)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCEEECCCHHHH---
T ss_conf 87999777899999999998589938999898899999999999999999976999876599998350722888998---
Q ss_pred CCCCCEEEEECCCHHHHHHHH-HHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHC----CCCEECCCCCCCCCCCCCCC
Q ss_conf 577889999769906999999-9997207899899967986578999999999847----99430675467600035684
Q gi|254780716|r 66 VCKPRKILMMVTDGDPVDQLI-DKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEK----GIYFIGIGVSGGVKGARSGA 140 (475)
Q Consensus 66 l~~pr~Iil~vp~g~~v~~vi-~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~k----gi~fid~pVSGG~~gA~~G~ 140 (475)
+...+.|+=++|-.-.++.-+ .+|-..+ +.++|+-.+||...-+ .+++.++.. +.||.-.|-- =|
T Consensus 80 l~~adlViEav~E~l~iK~~lf~~le~~~-~~~~IlaSnTSsl~is-~la~~~~~p~R~ig~HffNPp~l--------~p 149 (308)
T PRK06129 80 VADADYVQESAPENLELKRALFAELDALA-PPHAILASSTSALLAS-AFTEHLAGRERCLVAHPINPPYL--------IP 149 (308)
T ss_pred HCCCCEEEECCCCCHHHHHHHHHHHHHHC-CCCEEEEECCCCCCHH-HHHHHCCCCCCEEEECCCCCHHC--------CC
T ss_conf 47499999998077999999999999656-9855898455538899-99974598541788777786000--------63
Q ss_pred EE-EEEC---CHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf 37-8845---4899988899999875015678618985698746789887767878889998999999996428997899
Q gi|254780716|r 141 SL-MVGG---NEKAYNRVENILLSISAKYQNSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKNPLEI 216 (475)
Q Consensus 141 sl-MvGG---~~~~~~~~~piL~~iaak~~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~~i 216 (475)
.+ .+.| ++++.+++..+++.+..+ -..+...--|+.+ |-+.+ -.+-|++.++..+ --+.++|
T Consensus 150 LVEIV~g~~Ts~~~v~~~~~~~~~lGk~------PV~v~ke~pGFi~----NRl~~---a~~~EA~~Lv~eG-vas~edI 215 (308)
T PRK06129 150 VVEVVPAPWTAPATVARAHALYRAAGQS------PVRLRREIDGFVL----NRLQG---ALLREAFRLVADG-VASVEDI 215 (308)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCE------EEEEECCCCCHHH----HHHHH---HHHHHHHHHHHCC-CCCHHHH
T ss_conf 1567179998989999999999983998------8999025621589----99999---9999999999859-9899999
Q ss_pred HHHHH
Q ss_conf 99998
Q gi|254780716|r 217 SHLFS 221 (475)
Q Consensus 217 ~~vf~ 221 (475)
-+++.
T Consensus 216 D~a~~ 220 (308)
T PRK06129 216 DAVIR 220 (308)
T ss_pred HHHHH
T ss_conf 99998
No 41
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=99.05 E-value=3.6e-07 Score=72.43 Aligned_cols=97 Identities=19% Similarity=0.298 Sum_probs=76.2
Q ss_pred EEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCC-------CCCEECCCHHHHHHHCCCCCEEEEECC
Q ss_conf 0569815711168899999789859997399899999997122112-------784032898999860577889999769
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLS-------QKVIVTKNLEQMVEAVCKPRKILMMVT 77 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~-------~~~~~~~s~~e~v~~l~~pr~Iil~vp 77 (475)
+|++||.|.||.-+|..|.+.|++|..+.|.++..+.+.+.|-... ..+....+++ .+..+++||++++
T Consensus 2 kI~IiGaGaiG~~~a~~L~~ag~~V~li~r~~~~~~~i~~~Gl~i~~~~~~~~~~~~~~~~~~----~~~~~D~iiv~vK 77 (307)
T PRK06522 2 KIAILGAGAIGGLFGARLAQAGHDVTLVARGATLAEALNENGLRLLEGGEVFVVPVPAADDPA----ELGPQDLVILAVK 77 (307)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCEEEECCCCEEECCCCCCCCHH----HCCCCCEEEEECC
T ss_conf 899999149999999999848998899978888999999689399528976980550348866----7489888999806
Q ss_pred CHHHHHHHHHHHHHCCCCCCEEEECCCCC
Q ss_conf 90699999999972078998999679865
Q gi|254780716|r 78 DGDPVDQLIDKLKPLLSPEDILLDGGNSH 106 (475)
Q Consensus 78 ~g~~v~~vi~~l~~~l~~g~iiID~sts~ 106 (475)
+ .++++++..+.|.+.++.+|+-.-|.-
T Consensus 78 s-~~~~~a~~~l~~~l~~~t~iv~lqNG~ 105 (307)
T PRK06522 78 A-YQLPAALPDLAPLLGPETVVLFLQNGV 105 (307)
T ss_pred C-CCHHHHHHHHHHHCCCCCEEEEEECCC
T ss_conf 6-689999999986459994899961686
No 42
>pfam03807 F420_oxidored NADP oxidoreductase coenzyme F420-dependent.
Probab=99.03 E-value=4.4e-09 Score=86.50 Aligned_cols=91 Identities=20% Similarity=0.365 Sum_probs=72.6
Q ss_pred EEEEEECCHHHHHHHHHHHHCCCEEE-EEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 05698157111688999997898599-97399899999997122112784032898999860577889999769906999
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGFRLA-VYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~~V~-vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
+|||||.|+||.+|+..|+++|+++. +++|++++.+.+.++... . ....+..|.++ .+++|+++||. +.+.
T Consensus 1 KIg~IG~G~mg~ai~~~l~~~g~~~~~~~~r~~~~~~~~~~~~~~---~-~~~~~~~~~~~---~~DvIilavkp-~~~~ 72 (93)
T pfam03807 1 KIGIIGAGNMGEALARGLAAAGHEVIIANSRNPEKAAALAEELGV---G-ATAVSNEEAAE---EADVVILAVKP-EDAP 72 (93)
T ss_pred CEEEECCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCC---C-CCCCCHHHHHH---CCCEEEEEECH-HHHH
T ss_conf 989997009999999999977996127864878999999998199---7-64589999974---49989999799-9999
Q ss_pred HHHHHHHHCCCCCCEEEECCC
Q ss_conf 999999720789989996798
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDGGN 104 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~st 104 (475)
+|+.++.+.+ ++.++|+..+
T Consensus 73 ~vl~~i~~~~-~~k~vISv~a 92 (93)
T pfam03807 73 EVLAELADLL-KGKLVISITN 92 (93)
T ss_pred HHHHHHHHHC-CCCEEEEECC
T ss_conf 9999876250-8999998099
No 43
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=99.01 E-value=1.8e-07 Score=74.69 Aligned_cols=194 Identities=16% Similarity=0.245 Sum_probs=123.4
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----------HCCCC--------CCCCEECCCHHH
Q ss_conf 99880569815711168899999789859997399899999997-----------12211--------278403289899
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIK-----------KISGL--------SQKVIVTKNLEQ 61 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~-----------~~~~~--------~~~~~~~~s~~e 61 (475)
|+-.+|++||.|.||..+|.-++.+|++|.+||++++..+...+ .+... ...+....++++
T Consensus 1 M~i~~VaViGaG~MG~gIA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~dl~~ 80 (288)
T PRK08293 1 MTIKKVTVAGAGVLGSQIAFQTAFKGFDVTIYDISEEALDAAKRRLAKLADRYVRDLHLTDEAFAAAAKNRITFTTDLAQ 80 (288)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHH
T ss_conf 99578999897889999999999579928999898899999999999999999970599917899999807730589899
Q ss_pred HHHHCCCCCEEEEECCCHHHHHHHH-HHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHH----CCCCEECCCCCCCCCCC
Q ss_conf 9860577889999769906999999-999720789989996798657899999999984----79943067546760003
Q gi|254780716|r 62 MVEAVCKPRKILMMVTDGDPVDQLI-DKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSE----KGIYFIGIGVSGGVKGA 136 (475)
Q Consensus 62 ~v~~l~~pr~Iil~vp~g~~v~~vi-~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~----kgi~fid~pVSGG~~gA 136 (475)
+++.++.|+=++|..-.+..-+ .+|-..+.++ .|+-..||...-+. +++.+.. -|.||...|--
T Consensus 81 ---a~~~aDlViEav~E~l~iK~~lf~~le~~~~~~-~IlaSNTSsl~it~-la~~~~~p~R~ig~HffnP~~~------ 149 (288)
T PRK08293 81 ---AVKDADLVIEAVPEDPEIKGDFYEQLAEVAPEK-TIFATNSSTLLPSQ-FADATGRPEKFLALHFANHIWK------ 149 (288)
T ss_pred ---HHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCC-EEEEECCCCCCHHH-HHHHCCCCHHEEEECCCCCCCC------
T ss_conf ---846699999978087999999999999746776-69986687676579-9886199223343033588342------
Q ss_pred CCCCE--EEEE--CCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 56843--7884--5489998889999987501567861898569874678988776787888999899999999642899
Q gi|254780716|r 137 RSGAS--LMVG--GNEKAYNRVENILLSISAKYQNSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKN 212 (475)
Q Consensus 137 ~~G~s--lMvG--G~~~~~~~~~piL~~iaak~~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~ 212 (475)
-+. +..| -++++++.+..+++.+..+ -..+.+.--|. |-|-|. ...+.|++.++..+ .-+
T Consensus 150 --m~LVEiv~g~~Ts~e~~~~~~~~~~~lgk~------pvvv~~d~pGF----i~NRl~---~~~~~Ea~~lv~eG-va~ 213 (288)
T PRK08293 150 --NNTAEIMGHPGTDPEVYETVVAFAKAIGMV------PIVLKKEQPGY----ILNSLL---VPFLDAALALWAKG-VAD 213 (288)
T ss_pred --CCEEEECCCCCCCHHHHHHHHHHHHHCCCE------EEEECCCCCCE----EHHHHH---HHHHHHHHHHHHHC-CCC
T ss_conf --752644389999999999999999983998------99985776984----099999---99999999999918-999
Q ss_pred HHHHHHHHH
Q ss_conf 789999998
Q gi|254780716|r 213 PLEISHLFS 221 (475)
Q Consensus 213 ~~~i~~vf~ 221 (475)
.++|-.++.
T Consensus 214 ~e~ID~a~~ 222 (288)
T PRK08293 214 PETIDKTWM 222 (288)
T ss_pred HHHHHHHCH
T ss_conf 999998670
No 44
>PRK07660 consensus
Probab=98.99 E-value=2.9e-07 Score=73.12 Aligned_cols=194 Identities=20% Similarity=0.235 Sum_probs=125.1
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCC------------------CCCCCEECCCHHHH
Q ss_conf 998805698157111688999997898599973998999999971221------------------12784032898999
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISG------------------LSQKVIVTKNLEQM 62 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~------------------~~~~~~~~~s~~e~ 62 (475)
|.-.+|++||.|.||..+|..++.+|++|.+||++++..+...+.... ....+....+++
T Consensus 1 M~Ik~VaViGaG~MG~gIA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~-- 78 (283)
T PRK07660 1 MGVQKIVVIGAGQMGSGIAQVCAMAGYDVKVQDLKQEQLDRGLAIITKNLARQVEKGRMKEEEKEATLNRLTVTLDLD-- 78 (283)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHH--
T ss_conf 997889998969899999999996698189997988999999999999999998705899899999983587768989--
Q ss_pred HHHCCCCCEEEEECCCHHHHHHH-HHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHH----CCCCEECCCC-CCCCCCC
Q ss_conf 86057788999976990699999-9999720789989996798657899999999984----7994306754-6760003
Q gi|254780716|r 63 VEAVCKPRKILMMVTDGDPVDQL-IDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSE----KGIYFIGIGV-SGGVKGA 136 (475)
Q Consensus 63 v~~l~~pr~Iil~vp~g~~v~~v-i~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~----kgi~fid~pV-SGG~~gA 136 (475)
.+..++.|+=++|-.-.+..- +.+|-..+.++.| +-..||...-+. ++..+.. -|.||...|- .--.+
T Consensus 79 --~~~~aDlViEav~E~l~iK~~lf~~l~~~~~~~~I-laSNTS~l~i~~-ia~~~~~p~R~ig~HffnP~~~m~LVE-- 152 (283)
T PRK07660 79 --CVKEADLIIEAAVEKMDIKKKIFANLDEIAPEHAI-LATNTSSLPITE-IAAVTKRPEKVIGMHFMNPVPVMKLVE-- 152 (283)
T ss_pred --HHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCE-EEECCCCCCCHH-HHHHCCCCHHCCCCCCCCCCCCCCEEE--
T ss_conf --97689999987857544429999999964799718-986588887325-566517824304666678856572154--
Q ss_pred CCCCEEEEE--CCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
Q ss_conf 568437884--548999888999998750156786189856987467898877678788899989999999964289978
Q gi|254780716|r 137 RSGASLMVG--GNEKAYNRVENILLSISAKYQNSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKNPL 214 (475)
Q Consensus 137 ~~G~slMvG--G~~~~~~~~~piL~~iaak~~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~ 214 (475)
++.| -++++.+++..+++.+... ...+. .--|. |-|-|. ...+.|++.++..+ --+.+
T Consensus 153 -----Iv~g~~T~~~~~~~~~~~~~~lgk~------pV~v~-d~pGF----i~NRl~---~~~~~ea~~lv~eG-va~~e 212 (283)
T PRK07660 153 -----IIRGLATDDAVYETIEDITKKIGKV------PVEVN-DFPGF----VSNRIL---LPMINEAIYTLYEG-VATKE 212 (283)
T ss_pred -----ECCCCCCCHHHHHHHHHHHHHCCCE------EEEEC-CCCCC----HHHHHH---HHHHHHHHHHHHCC-CCCHH
T ss_conf -----5699999799999999999875942------79983-78973----279878---99999999999819-99999
Q ss_pred HHHHHHHH
Q ss_conf 99999986
Q gi|254780716|r 215 EISHLFSK 222 (475)
Q Consensus 215 ~i~~vf~~ 222 (475)
+|-.++..
T Consensus 213 ~iD~~~~~ 220 (283)
T PRK07660 213 AIDEVMKL 220 (283)
T ss_pred HHHHHHHH
T ss_conf 99998675
No 45
>PRK06476 pyrroline-5-carboxylate reductase; Reviewed
Probab=98.99 E-value=1.9e-06 Score=67.07 Aligned_cols=141 Identities=13% Similarity=0.248 Sum_probs=92.8
Q ss_pred EEEEEECCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHH
Q ss_conf 05698157111688999997898---599973998999999971221127840328989998605778899997699069
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGF---RLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDP 81 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~---~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~ 81 (475)
+|||||.|+||.+|++-|++.|+ ++.+++|++++.+.+.++.. .+..+.+-.++++.. ++|+++|+. +.
T Consensus 2 kIgfIG~GnMg~Aii~Gl~~~~~~~~~i~v~~r~~~~~~~l~~~~~----~v~~~~~n~~~~~~~---dvi~LaVKP-~~ 73 (255)
T PRK06476 2 RIGFIGTGAITEAMVTGLLSSPADVSEIIVSPRNAQIAARLAARFA----KVRIAKDNQAVVDRS---DVVFLAVRP-QI 73 (255)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCC----CEEEECCHHHHHHHC---CEEEEEECH-HH
T ss_conf 8999864699999999999788992508898989899999998769----559857889998518---878886178-88
Q ss_pred HHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCC-EECCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHH
Q ss_conf 999999997207899899967986578999999999847994-3067546760003568437884548999888999998
Q gi|254780716|r 82 VDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIY-FIGIGVSGGVKGARSGASLMVGGNEKAYNRVENILLS 160 (475)
Q Consensus 82 v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~-fid~pVSGG~~gA~~G~slMvGG~~~~~~~~~piL~~ 160 (475)
+++|++++. +.++.+||-.--.- ...++.+.+.. +.. .=-||- .+..-..|.+.++..+ +.++.+|+.
T Consensus 74 ~~~vl~~l~--~~~~~~vISi~AGi--~i~~l~~~l~~-~~~vvR~MPN--~~~~~g~g~t~i~~~~----~~v~~lf~~ 142 (255)
T PRK06476 74 AEEVLRALR--FRPGQTVISVIAAT--TRAALLKWIGA-DVKLVRAIPL--PFVAERKGVTAIYPPD----PFVRALFDA 142 (255)
T ss_pred HHHHHHHHH--CCCCCEEEEECCCC--CHHHHHHHHCC-CCCEEEECCC--CHHHHCCCCEEECCCH----HHHHHHHHH
T ss_conf 998877620--57897899973787--79999976189-9864885587--0888468862214867----999999983
Q ss_pred HHCC
Q ss_conf 7501
Q gi|254780716|r 161 ISAK 164 (475)
Q Consensus 161 iaak 164 (475)
++.-
T Consensus 143 ~G~~ 146 (255)
T PRK06476 143 LGTA 146 (255)
T ss_pred CCCE
T ss_conf 8998
No 46
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=98.98 E-value=3.7e-07 Score=72.34 Aligned_cols=194 Identities=13% Similarity=0.186 Sum_probs=124.0
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH--------------CCC-------CCCCCEECCCH
Q ss_conf 998805698157111688999997898599973998999999971--------------221-------12784032898
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKK--------------ISG-------LSQKVIVTKNL 59 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~--------------~~~-------~~~~~~~~~s~ 59 (475)
|.-.+||+||.|.||..+|..++.+|++|.+||++++..+...+. +.- ....+....++
T Consensus 1 M~Ik~VaViGaG~MG~gIA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~~~~~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ 80 (291)
T PRK06035 1 MDIKVIGVVGSGVMGQGIAQVFARTGYDVTIVDVSEEILKNAMELIESGPYGLRNLVEKGKMSEDEAKAIMARIRTSTSY 80 (291)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCH
T ss_conf 99588999887688999999999589988999899899999999999718999999866899999999998366435888
Q ss_pred HHHHHHCCCCCEEEEECCCHHHHHHHH-HHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHH----CCCCEECCCC-CCCC
Q ss_conf 999860577889999769906999999-999720789989996798657899999999984----7994306754-6760
Q gi|254780716|r 60 EQMVEAVCKPRKILMMVTDGDPVDQLI-DKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSE----KGIYFIGIGV-SGGV 133 (475)
Q Consensus 60 ~e~v~~l~~pr~Iil~vp~g~~v~~vi-~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~----kgi~fid~pV-SGG~ 133 (475)
+ ++..++.|+=++|-.-.+..-+ .+|-..+.++.|+ -..||...-+. +++.+.. -|.||...|- .--+
T Consensus 81 ~----~~~~aDlViEav~E~l~iK~~lf~~l~~~~~~~~Il-aSNTSsl~is~-ia~~~~~p~R~ig~HffnP~~~~~LV 154 (291)
T PRK06035 81 E----SLSDADFIVEAVPEKLDLKRKVFAELERNVSPETII-ASNTSGIMIAE-IATALERKDRFIGMHWFNPAPVMKLI 154 (291)
T ss_pred H----HHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEE-EECCCCCCHHH-HHHHCCCCHHEEEECCCCCCCCCCEE
T ss_conf 8----976599999888388999999999999658998379-86088778699-99765994223641126870116336
Q ss_pred CCCCCCCEEEEE--CCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 003568437884--548999888999998750156786189856987467898877678788899989999999964289
Q gi|254780716|r 134 KGARSGASLMVG--GNEKAYNRVENILLSISAKYQNSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNK 211 (475)
Q Consensus 134 ~gA~~G~slMvG--G~~~~~~~~~piL~~iaak~~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~ 211 (475)
+ ++.| -++++.+.+..+++.+... ...+. ..-|. |-|-|.. ..+.|++.++..+ --
T Consensus 155 E-------Iv~g~~Ts~~~~~~~~~~~~~lgk~------pV~v~-d~pGF----i~NRl~~---~~~~Ea~~lv~eG-va 212 (291)
T PRK06035 155 E-------VVRAALTSEETFNTTVELSKKIGKI------PIEVA-DVPGF----FTTRFIE---GWLLEAIRSFEIG-IA 212 (291)
T ss_pred E-------ECCCCCCCHHHHHHHHHHHHHCCCE------EEEEC-CCCCC----HHHHHHH---HHHHHHHHHHHCC-CC
T ss_conf 6-------5389999899999999999975984------89965-87742----4998899---9999999999839-99
Q ss_pred CHHHHHHHHHH
Q ss_conf 97899999986
Q gi|254780716|r 212 NPLEISHLFSK 222 (475)
Q Consensus 212 ~~~~i~~vf~~ 222 (475)
+.++|-+++..
T Consensus 213 s~edID~~~~~ 223 (291)
T PRK06035 213 TIKDIDEMCKL 223 (291)
T ss_pred CHHHHHHHHHH
T ss_conf 99999998376
No 47
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.98 E-value=3.5e-07 Score=72.50 Aligned_cols=246 Identities=11% Similarity=0.148 Sum_probs=147.7
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCC--------------CCCCCCEECCCHHHHHHHCCCC
Q ss_conf 80569815711168899999789859997399899999997122--------------1127840328989998605778
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKIS--------------GLSQKVIVTKNLEQMVEAVCKP 69 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~--------------~~~~~~~~~~s~~e~v~~l~~p 69 (475)
.+|++||.|.||..+|..++.+|++|.+||++++..+.+.+... ...+.+..+.++++.+ ...
T Consensus 8 k~VaVIGaG~MG~giAa~~a~~G~~V~l~D~~~~a~~~~~~~i~~~~~~l~~~~~~~~~~~~~l~~~~~l~~av---~~a 84 (321)
T PRK07066 8 KTFAAIGSGVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACV---ADA 84 (321)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHH---CCC
T ss_conf 87999888788899999999479859999698889999999999999999866899631696501468889986---359
Q ss_pred CEEEEECCCHHHHHHHH-HHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHH----CCCCEECCCCCCCCCCCCCCCEE-E
Q ss_conf 89999769906999999-999720789989996798657899999999984----79943067546760003568437-8
Q gi|254780716|r 70 RKILMMVTDGDPVDQLI-DKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSE----KGIYFIGIGVSGGVKGARSGASL-M 143 (475)
Q Consensus 70 r~Iil~vp~g~~v~~vi-~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~----kgi~fid~pVSGG~~gA~~G~sl-M 143 (475)
+.|+=++|-.-.++.-+ .+|-+.+.++ +||-.+||...-+.- +..+.. -+.||.-.|-- =|.+ .
T Consensus 85 D~ViEavpE~l~lK~~lf~~ld~~~~~~-aIiASnTS~l~is~l-~~~~~~peR~i~~HfFNP~~l--------mPLVEV 154 (321)
T PRK07066 85 DFIQESAPEREALKLELHERISRAAKPD-AIIASSTSGLLPTDF-YARATHPERCVVGHPFNPVYL--------LPLVEV 154 (321)
T ss_pred CEEEECCEECHHHHHHHHHHHHHHCCCC-CEEEECCCCCCHHHH-HHHCCCCCEEEEEEECCCCCC--------CCCEEE
T ss_conf 9899877665999999999999767988-678525765789999-873699702687610587532--------542444
Q ss_pred EEC---CHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf 845---48999888999998750156786189856987467898877678788899989999999964289978999999
Q gi|254780716|r 144 VGG---NEKAYNRVENILLSISAKYQNSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKNPLEISHLF 220 (475)
Q Consensus 144 vGG---~~~~~~~~~piL~~iaak~~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~~i~~vf 220 (475)
|+| ++++++++..+++.+..+ -..+-..--|+. -|-+.. -++-|+++++..+ --+.++|-+++
T Consensus 155 V~g~~Ts~~tv~~a~~~~~~iGk~------PV~v~ke~pGFi----~NRL~~---al~rEA~~Lv~eG-vAs~edID~a~ 220 (321)
T PRK07066 155 LGGERTAPEAVDAAMGIYRALGMR------PLHVRKEVPGFI----ADRLLE---ALWREALHLVNEG-VATTGEIDDAI 220 (321)
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCE------EEEEECCCCCHH----HHHHHH---HHHHHHHHHHHCC-CCCHHHHHHHH
T ss_conf 289999799999999999981997------889927784259----999999---9999999999818-99999999999
Q ss_pred H-----HCC-CCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
Q ss_conf 8-----606-8844307999999999740567999520010233365871677898877517888514677788877500
Q gi|254780716|r 221 S-----KWD-TGKLSSYLIKITAEILSSSDTITGMPIIDVICDKASQKGTGIRSIIEGHKLSSSMTITETAIFARNLSLY 294 (475)
Q Consensus 221 ~-----~w~-~~~~~syLl~i~~~il~~k~~~~g~~lid~i~d~~~~kgTg~Wt~~~a~~lgvp~p~i~~av~aR~~S~~ 294 (475)
. +|. -|....|=| .+|+-=+...++.-+.-=.--||- ++ +|.+...+-.|.....
T Consensus 221 ~~G~GlRwa~mGpf~~~~l------------~Gg~~G~~~~l~~~g~~~~~~w~~-----l~--~p~~~~~~~~~~~~~~ 281 (321)
T PRK07066 221 RFGAGIRWSFMGTFLTYTL------------AGGDAGMRHFMQQFGPALELPWTK-----LV--APELTDALIDRVVEGT 281 (321)
T ss_pred HHCCCCCCCCCCHHHHHHH------------CCCHHHHHHHHHHHCCCCCCCCCC-----CC--CCCCCHHHHHHHHHHH
T ss_conf 8089998535272798875------------173889999999808610275323-----69--9888999999999999
Q ss_pred H
Q ss_conf 5
Q gi|254780716|r 295 R 295 (475)
Q Consensus 295 k 295 (475)
+
T Consensus 282 ~ 282 (321)
T PRK07066 282 A 282 (321)
T ss_pred H
T ss_conf 9
No 48
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.97 E-value=3.8e-07 Score=72.21 Aligned_cols=193 Identities=19% Similarity=0.273 Sum_probs=124.6
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHC-----------C-------CCCCCCEECCCHHHH
Q ss_conf 9988056981571116889999978985999739989999999712-----------2-------112784032898999
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKI-----------S-------GLSQKVIVTKNLEQM 62 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~-----------~-------~~~~~~~~~~s~~e~ 62 (475)
|.-.+|++||-|.||..+|..++.+|++|.+||++++..+...+.- . .....+....++++
T Consensus 2 ~~ik~VaViGAG~MG~giA~~~a~~G~~V~l~D~~~e~~~~~~~~i~~~l~~~~~~~~l~~~~~~~~l~~i~~~~~~~~- 80 (292)
T PRK07530 2 MAIKKVGVIGAGQMGNGIAHVCALAGYDVLLNDVSADRLESGMATINGNLARQVAKGKISEEARAAALARITTATTLDD- 80 (292)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHH-
T ss_conf 9988899989669999999999967996899979889999999999999999997068888999999840777689889-
Q ss_pred HHHCCCCCEEEEECCCHHHHHHHH-HHHHHCCCCCCEEEECCCCCHHHHHHHHHHHH----HCCCCEECCCC-CCCCCCC
Q ss_conf 860577889999769906999999-99972078998999679865789999999998----47994306754-6760003
Q gi|254780716|r 63 VEAVCKPRKILMMVTDGDPVDQLI-DKLKPLLSPEDILLDGGNSHFCDTQIRSLQLS----EKGIYFIGIGV-SGGVKGA 136 (475)
Q Consensus 63 v~~l~~pr~Iil~vp~g~~v~~vi-~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~----~kgi~fid~pV-SGG~~gA 136 (475)
+...+.|+=++|..-.++.-+ .+|-+.++++.|+ -..||...-+. ++..+. =.|.||...|- .--++
T Consensus 81 ---~~~aDlViEav~E~l~iK~~lf~~l~~~~~~~~Il-aSNTSsl~is~-la~~~~~p~R~ig~HffnP~~~~~LVE-- 153 (292)
T PRK07530 81 ---LADCDLVIEAATEDETVKRKIFAQLCPVLKPEAIL-ASNTSSISITR-LASSTDRPERFIGIHFMNPVPVMKLVE-- 153 (292)
T ss_pred ---HCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEE-EECCCCCCCHH-HHHHCCCHHHHCCCCCCCCCCCCCEEE--
T ss_conf ---66499999888474587898999998626988489-87588875056-666437847643632168702162266--
Q ss_pred CCCCEEEEE--CCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
Q ss_conf 568437884--548999888999998750156786189856987467898877678788899989999999964289978
Q gi|254780716|r 137 RSGASLMVG--GNEKAYNRVENILLSISAKYQNSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKNPL 214 (475)
Q Consensus 137 ~~G~slMvG--G~~~~~~~~~piL~~iaak~~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~ 214 (475)
++.| =++++++++..+++.+... +..+. .--|. |-|-|. ...+.|++.++..+ --+.+
T Consensus 154 -----Iv~g~~Ts~~~~~~~~~~~~~lgk~------pvv~~-d~pGF----i~NRl~---~~~~~Ea~~lv~eG-va~~e 213 (292)
T PRK07530 154 -----LIRGIATDEATFEAAKAFVTKLGKT------IAVAE-DFPAF----IVNRIL---LPMINEAIYTLYEG-VGSVE 213 (292)
T ss_pred -----ECCCCCCCHHHHHHHHHHHHHCCCC------EEEEC-CCCCH----HHHHHH---HHHHHHHHHHHHCC-CCCHH
T ss_conf -----6389999899999999999974985------08976-76760----999999---99999999999819-99999
Q ss_pred HHHHHHH
Q ss_conf 9999998
Q gi|254780716|r 215 EISHLFS 221 (475)
Q Consensus 215 ~i~~vf~ 221 (475)
+|-.++.
T Consensus 214 ~ID~~~~ 220 (292)
T PRK07530 214 AIDTAMK 220 (292)
T ss_pred HHHHHHH
T ss_conf 9999986
No 49
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.97 E-value=2.5e-07 Score=73.56 Aligned_cols=191 Identities=20% Similarity=0.271 Sum_probs=125.3
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCC------------CCCCCEECCCHHHHHHHCCCCCE
Q ss_conf 805698157111688999997898599973998999999971221------------12784032898999860577889
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISG------------LSQKVIVTKNLEQMVEAVCKPRK 71 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~------------~~~~~~~~~s~~e~v~~l~~pr~ 71 (475)
++|++||.|.||..+|..++.+|++|.+||++++..+...+.-.. ....+....+++ .+..++.
T Consensus 6 k~VaViGAG~MG~gIA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~i~~~~~l~----a~~~aDl 81 (310)
T PRK06130 6 QNLAIIGAGAMGSGIAALFASKGLDVVLIDPMPGALERAAQVIERQLGVYAPGAIAGTLQRIRMDAGLE----AACGADL 81 (310)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEECCCHH----HHCCCCE
T ss_conf 889897877999999999985899889997999999999999999865327666999874102137888----9668999
Q ss_pred EEEECCCHHHHHHHH-HHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHH----CCCCEECCCCC-CCCCCCCCCCEEEEE
Q ss_conf 999769906999999-999720789989996798657899999999984----79943067546-760003568437884
Q gi|254780716|r 72 ILMMVTDGDPVDQLI-DKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSE----KGIYFIGIGVS-GGVKGARSGASLMVG 145 (475)
Q Consensus 72 Iil~vp~g~~v~~vi-~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~----kgi~fid~pVS-GG~~gA~~G~slMvG 145 (475)
|+=++|-.-.+..-+ .+|-..+.++.| +-..||...-+. +++.+.. -|.||.-.|-- --++ ++.|
T Consensus 82 ViEav~E~l~iK~~lf~~le~~~~~~~I-lASNTSsl~is~-ia~~~~~p~R~ig~HffnP~~~m~LVE-------Iv~g 152 (310)
T PRK06130 82 VIEAVPEKLDLKRDIFARLDTLCDPQTI-FATNTSGLSINA-IAQAVTRRERFVGTHFFTPADVIPLVE-------VVRN 152 (310)
T ss_pred EEECCCCCHHHHHHHHHHHHCCCCCCCE-EEECCCCCCCHH-HHHHCCCHHHEEEEEECCCCCCCCCEE-------ECCC
T ss_conf 9988817789999999998606898838-996488776067-888638987815544437767766652-------2378
Q ss_pred --CCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf --5489998889999987501567861898569874678988776787888999899999999642899789999998
Q gi|254780716|r 146 --GNEKAYNRVENILLSISAKYQNSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKNPLEISHLFS 221 (475)
Q Consensus 146 --G~~~~~~~~~piL~~iaak~~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~~i~~vf~ 221 (475)
-++++.+.+..+++.+..+ -..+.+.--|. |-|-|.+ ..+-|++.++..+ --+.++|-+++.
T Consensus 153 ~~Ts~~~~~~~~~~~~~~gk~------pvvv~kd~pGF----i~NRl~~---~~~~EA~~lv~eG-vas~edID~~~~ 216 (310)
T PRK06130 153 DDTSPQTVATVMAMLRSIGKR------PVLVKKDIPGF----IANRIQH---ALAREAISLLEKG-VASAEDIDEVVK 216 (310)
T ss_pred CCCCHHHHHHHHHHHHHCCCE------EEEECCCCCCC----CHHHHHH---HHHHHHHHHHHCC-CCCHHHHHHHHH
T ss_conf 989899999999999971987------99988665880----1888899---9999999999839-999999999867
No 50
>PRK09117 consensus
Probab=98.96 E-value=3.6e-07 Score=72.41 Aligned_cols=190 Identities=16% Similarity=0.197 Sum_probs=124.8
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-----------CCC-------CCCCCEECCCHHHHHHH
Q ss_conf 805698157111688999997898599973998999999971-----------221-------12784032898999860
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKK-----------ISG-------LSQKVIVTKNLEQMVEA 65 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~-----------~~~-------~~~~~~~~~s~~e~v~~ 65 (475)
.+|++||-|.||..+|..++.+|++|.+||++++..+...+. +.. ....+.+..+++ .
T Consensus 3 ~~VaViGaG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~~d~~----a 78 (282)
T PRK09117 3 QTVGIIGAGTMGNGIAQACAVAGLDVVMVDISDAAVQRGLATVAGSLDRLIKKEKLTEADKAAALARIKGSTDYD----A 78 (282)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHH----H
T ss_conf 779998977999999999996799689998988999999999999999999706887788999984065679989----9
Q ss_pred CCCCCEEEEECCCHHHHHHHH-HHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHH----CCCCEECCCCC-CCCCCCCCC
Q ss_conf 577889999769906999999-999720789989996798657899999999984----79943067546-760003568
Q gi|254780716|r 66 VCKPRKILMMVTDGDPVDQLI-DKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSE----KGIYFIGIGVS-GGVKGARSG 139 (475)
Q Consensus 66 l~~pr~Iil~vp~g~~v~~vi-~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~----kgi~fid~pVS-GG~~gA~~G 139 (475)
++.++.|+=+||-.-.+..-+ .+|-+.+.++.| +-..||...-+ ++++.+.. -|.||.-.|-- --++
T Consensus 79 ~~~aDlViEav~E~l~iK~~lf~~l~~~~~~~~I-laSNTS~l~i~-~ia~~~~~p~R~ig~HffnP~~~~~LVE----- 151 (282)
T PRK09117 79 LKDADLVIEAATENLDLKLKILKQLDALVGPDAI-IATNTSSISIT-KLAAATSRPDRFIGMHFFNPVPMMALVE----- 151 (282)
T ss_pred HCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCE-EEECCCCCCCH-HHHHHCCCHHHCCCCCCCCCCCCCCEEE-----
T ss_conf 7559999987858888889999999865799818-98658767617-7887649846415545568866584488-----
Q ss_pred CEEEEE--CCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
Q ss_conf 437884--548999888999998750156786189856987467898877678788899989999999964289978999
Q gi|254780716|r 140 ASLMVG--GNEKAYNRVENILLSISAKYQNSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKNPLEIS 217 (475)
Q Consensus 140 ~slMvG--G~~~~~~~~~piL~~iaak~~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~~i~ 217 (475)
++.| -++++++.+..+.+.+... ...+.+. -|.. -|-|.. ..+.|++.++..+ --++++|-
T Consensus 152 --iv~g~~Ts~~~~~~~~~~~~~lgk~------pV~vkd~-pGFi----~NRl~~---a~~~ea~~lv~eG-va~~~~ID 214 (282)
T PRK09117 152 --LIRGLQTSDATHAAVEALAKRLGKT------PITVKNS-PGFV----VNRILC---PMINEAIFVLGEG-LATAEDID 214 (282)
T ss_pred --ECCCCCCCHHHHHHHHHHHHHCCCE------EEEEECC-CCCC----HHHHHH---HHHHHHHHHHHCC-CCCHHHHH
T ss_conf --6499999899999999999973987------9998167-8810----999999---9999999999849-99999999
Q ss_pred HHHH
Q ss_conf 9998
Q gi|254780716|r 218 HLFS 221 (475)
Q Consensus 218 ~vf~ 221 (475)
.++.
T Consensus 215 ~~~~ 218 (282)
T PRK09117 215 EGMK 218 (282)
T ss_pred HHHH
T ss_conf 8735
No 51
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.94 E-value=2.4e-07 Score=73.71 Aligned_cols=193 Identities=13% Similarity=0.205 Sum_probs=124.0
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCC------------------CCCCCEECCCHHHH
Q ss_conf 998805698157111688999997898599973998999999971221------------------12784032898999
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISG------------------LSQKVIVTKNLEQM 62 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~------------------~~~~~~~~~s~~e~ 62 (475)
|-| +|++||.|.||..+|..++.+|++|.+||++++..+...+.-.. ....++...++++.
T Consensus 1 mIk-kV~ViGaG~MG~~IA~~~a~~G~~V~l~D~~~e~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~dl~~a 79 (289)
T PRK09260 1 MME-KIVVVGAGVMGRGIAYVFASSGFQTTLVDISQEQLASAQQEIESILEDGVALGKVTEAAAQAALARLSYSLDLKEA 79 (289)
T ss_pred CCC-EEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHH
T ss_conf 967-6999796887899999999689988999799899999999999999999871799989999999558766888998
Q ss_pred HHHCCCCCEEEEECCCHHHHHHHH-HHHHHCCCCCCEEEECCCCCHHHHHHHHHHHH----HCCCCEECCCCC-CCCCCC
Q ss_conf 860577889999769906999999-99972078998999679865789999999998----479943067546-760003
Q gi|254780716|r 63 VEAVCKPRKILMMVTDGDPVDQLI-DKLKPLLSPEDILLDGGNSHFCDTQIRSLQLS----EKGIYFIGIGVS-GGVKGA 136 (475)
Q Consensus 63 v~~l~~pr~Iil~vp~g~~v~~vi-~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~----~kgi~fid~pVS-GG~~gA 136 (475)
++.++.|+=+||-.-.+..-+ .+|-+.+.++.|+. ..||...-+. +++.+. =-|.||.-.|-- --++
T Consensus 80 ---~~~aDlViEav~E~l~iK~~v~~~l~~~~~~~~Ila-SNTSsl~is~-ia~~~~~p~R~ig~HffnP~~~~~lVE-- 152 (289)
T PRK09260 80 ---VAGADLLIEAVPEKLEIKQAVFETADAHAPAEALIA-TNTSTLSPTE-IASATKRPERVIGMHFFNPVHKMKLVE-- 152 (289)
T ss_pred ---HCCCCEEEECCCCCHHHCHHHHHHHHHCCCCCCEEE-ECCCCCCCHH-HHHHCCCHHHEEEECCCCCHHHHEEEE--
T ss_conf ---476999998886863236899999860689980898-5588877114-554159846626412477432212356--
Q ss_pred CCCCEEEEE--CCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
Q ss_conf 568437884--548999888999998750156786189856987467898877678788899989999999964289978
Q gi|254780716|r 137 RSGASLMVG--GNEKAYNRVENILLSISAKYQNSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKNPL 214 (475)
Q Consensus 137 ~~G~slMvG--G~~~~~~~~~piL~~iaak~~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~ 214 (475)
++.| -++++++.+..+.+.+... ...+.+ .-| -|-|-|.+ ..+.|++.++..+ .-+++
T Consensus 153 -----vv~g~~Ts~e~i~~~~~~~~~lgk~------pv~v~d-~pG----Fi~NRl~~---~~~~ea~~lv~eG-va~~~ 212 (289)
T PRK09260 153 -----LVRGLETSDETVAVCREVAEQLGKE------TVVVNE-FPG----FVTSRISA---LVGNEAMYMLQEG-VATAE 212 (289)
T ss_pred -----ECCCCCCCHHHHHHHHHHHHHCCCC------EEEECC-CCC----HHHHHHHH---HHHHHHHHHHHCC-CCCHH
T ss_conf -----4589999999999999999974984------278568-875----29999899---9999999999819-99999
Q ss_pred HHHHHHH
Q ss_conf 9999998
Q gi|254780716|r 215 EISHLFS 221 (475)
Q Consensus 215 ~i~~vf~ 221 (475)
+|-.++.
T Consensus 213 dID~~~~ 219 (289)
T PRK09260 213 DIDKALR 219 (289)
T ss_pred HHHHHHH
T ss_conf 9999978
No 52
>PRK07634 pyrroline-5-carboxylate reductase; Reviewed
Probab=98.90 E-value=1.7e-06 Score=67.52 Aligned_cols=149 Identities=21% Similarity=0.290 Sum_probs=96.7
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCC----EEEEEECC-HHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEE
Q ss_conf 998805698157111688999997898----59997399-8999999971221127840328989998605778899997
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGF----RLAVYNKD-FELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMM 75 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~----~V~vydr~-~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~ 75 (475)
|+|.+|||||.|+||++|+.-|++.+. ++.+.+++ .++.+.+.++. ++....+..+.++.. ++|+++
T Consensus 2 ~~~~kI~fIG~GnMg~Aii~gll~~~~~~~~~i~v~~~~~~~~~~~l~~~~-----~i~~~~~~~~~~~~~---d~Iila 73 (245)
T PRK07634 2 LTKHRILFIGAGRMAEAIFSGLLKTSKEYIEEIIVSNRSNVEKLDQLQARY-----NVSTTTDWKQHVTSV---DTIVLA 73 (245)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHC-----CCEECCCHHHHHHHC---CEEEEE
T ss_conf 999919998758999999999997799996059996999999999999971-----974227779998559---999999
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEE-CCCCCCCCCCCCCCCEEEEEC---CHHHH
Q ss_conf 69906999999999720789989996798657899999999984799430-675467600035684378845---48999
Q gi|254780716|r 76 VTDGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFI-GIGVSGGVKGARSGASLMVGG---NEKAY 151 (475)
Q Consensus 76 vp~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fi-d~pVSGG~~gA~~G~slMvGG---~~~~~ 151 (475)
|+. ..+.+|+.++.+.++ +.+||-.--.- ...++.+.+. .+...+ -||=. +.....|.+.+..+ +++.-
T Consensus 74 vKP-~~~~~vl~~i~~~~~-~~~iISi~AGi--~i~~l~~~l~-~~~~v~R~MPN~--~~~v~~g~t~~~~~~~~~~~~~ 146 (245)
T PRK07634 74 MPP-SAHEELLAELSPLLS-NQLVVTVAAGI--GPSYLEERLP-KGTPVAWIMPNT--AAEIGKSISLYTMGQFVNETHQ 146 (245)
T ss_pred ECC-HHHHHHHHHHHHHHC-CCEEEEEECCC--CHHHHHHHCC-CCCEEEEECCCH--HHHHCCCCEEEECCCCCCHHHH
T ss_conf 891-749999999877606-98899981799--8999998748-997289945857--4897588189853887999999
Q ss_pred HHHHHHHHHHHCC
Q ss_conf 8889999987501
Q gi|254780716|r 152 NRVENILLSISAK 164 (475)
Q Consensus 152 ~~~~piL~~iaak 164 (475)
+.++.+|+.++.-
T Consensus 147 ~~v~~lf~~~G~~ 159 (245)
T PRK07634 147 ETLQLLLRGIGTS 159 (245)
T ss_pred HHHHHHHHCCCEE
T ss_conf 9999998628549
No 53
>PRK12439 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=98.87 E-value=4e-07 Score=72.03 Aligned_cols=152 Identities=15% Similarity=0.138 Sum_probs=101.8
Q ss_pred CCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCC---------CCCCCCEECCCHHHHHHHCCCCCEEE
Q ss_conf 880569815711168899999789859997399899999997122---------11278403289899986057788999
Q gi|254780716|r 3 QADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKIS---------GLSQKVIVTKNLEQMVEAVCKPRKIL 73 (475)
Q Consensus 3 k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~---------~~~~~~~~~~s~~e~v~~l~~pr~Ii 73 (475)
+.+|++||-|.||.++|.-|+++|..|. |-|+++.++++.+... ....++....++++.++.. ++|+
T Consensus 6 ~~KI~ViGaGawGTALA~~la~n~~~v~-w~r~~~~~~~In~~~~N~kyL~~~i~Lp~~i~~t~dl~~a~~~a---diii 81 (340)
T PRK12439 6 EPKVVVLGGGSWGTTVASICARRGPTLQ-WVRSEETAKDINDNHRNSRYLGNDVVLSDTLRATTDFTEAANCA---DVVV 81 (340)
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCEEE-EECCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHHHHCC---CEEE
T ss_conf 9928998969999999999995899899-96899999999982888768998755898728978999998269---9899
Q ss_pred EECCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHH-HHHHHHHCCCCEECCC-CCCC---CCCCCCCC-EEEEE-C
Q ss_conf 976990699999999972078998999679865789999-9999984799430675-4676---00035684-37884-5
Q gi|254780716|r 74 MMVTDGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQI-RSLQLSEKGIYFIGIG-VSGG---VKGARSGA-SLMVG-G 146 (475)
Q Consensus 74 l~vp~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~-~~~~l~~kgi~fid~p-VSGG---~~gA~~G~-slMvG-G 146 (475)
+.||+ +.+.++++++.+.+++..++|.++--.-..+.. ..+.+++.- .--.+. +||- .+-|+.-| ++.++ -
T Consensus 82 ~avPS-~~~r~~~~~l~~~l~~~~~iv~~sKGie~~t~~~~seii~e~l-~~~~~~vLSGPsfA~Eva~~~pta~viAs~ 159 (340)
T PRK12439 82 MGVPS-HGFRGVLTELAKELRPWVPVVSLVKGLEQGTNMRMSQIIEEVL-PGHPAGILAGPNIAREVAEGYAAAAVLAMP 159 (340)
T ss_pred EECCC-HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHC-CCCCEEEECCCCHHHHHHHCCCCCEEEECC
T ss_conf 93680-8999999999865578875997327502799987999999875-799706863874499997089851366468
Q ss_pred CHHHHHHHHHHHHH
Q ss_conf 48999888999998
Q gi|254780716|r 147 NEKAYNRVENILLS 160 (475)
Q Consensus 147 ~~~~~~~~~piL~~ 160 (475)
+.+.-++++.+|..
T Consensus 160 ~~~~a~~l~~lf~~ 173 (340)
T PRK12439 160 DQHLATRLSALFRT 173 (340)
T ss_pred CHHHHHHHHHHHCC
T ss_conf 88999999998586
No 54
>PRK08268 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.86 E-value=1.4e-06 Score=68.10 Aligned_cols=191 Identities=15% Similarity=0.190 Sum_probs=122.8
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-----------CC-------CCCCCCEECCCHHHHHHH
Q ss_conf 805698157111688999997898599973998999999971-----------22-------112784032898999860
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKK-----------IS-------GLSQKVIVTKNLEQMVEA 65 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~-----------~~-------~~~~~~~~~~s~~e~v~~ 65 (475)
.+||+||.|.||..+|..++.+|++|.+||++++..+...+. +. .....+..+.++++
T Consensus 4 ~~VaViGaGtMG~gIA~~~a~aG~~V~l~D~~~~~l~~a~~~i~~~l~~~~~~g~~~~~~~~~~~~ri~~~~~l~~---- 79 (503)
T PRK08268 4 ATVAVIGAGAMGAGIAQVAAQAGHTVLLYDARAGAAAAARDGIAATLAKLVEKGKLTAEQAEAALARLRPVEALAD---- 79 (503)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEECCHHH----
T ss_conf 7899979688999999999938990899979989999999999999999997699998899999847474177889----
Q ss_pred CCCCCEEEEECCCHHHHHHHH-HHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHH----CCCCEECCC-CCCCCCCCCCC
Q ss_conf 577889999769906999999-999720789989996798657899999999984----799430675-46760003568
Q gi|254780716|r 66 VCKPRKILMMVTDGDPVDQLI-DKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSE----KGIYFIGIG-VSGGVKGARSG 139 (475)
Q Consensus 66 l~~pr~Iil~vp~g~~v~~vi-~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~----kgi~fid~p-VSGG~~gA~~G 139 (475)
+...+.||=+||-.-.++.-+ .+|-..+.++.|+ -..||...-+ ++++.++. -|.||...+ +.--++
T Consensus 80 l~~aDlVIEAV~E~l~~K~~vf~~l~~~~~~~~Il-ASNTSsL~it-~iA~~~~~PeR~iG~HFfnP~~~m~LVE----- 152 (503)
T PRK08268 80 LADCDLVVEAIVERLDVKQALFAQLEAIVSDDCIL-ATNTSSLSIT-AIAAALKHPERVAGLHFFNPVPLMKLVE----- 152 (503)
T ss_pred HCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEE-EECCCCCCHH-HHHHHCCCCCEEEEEEECCCCCCCEEEE-----
T ss_conf 75799999936067899999999998547988579-8417767799-9997469844078877158724460488-----
Q ss_pred CEEEEE--CCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
Q ss_conf 437884--548999888999998750156786189856987467898877678788899989999999964289978999
Q gi|254780716|r 140 ASLMVG--GNEKAYNRVENILLSISAKYQNSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKNPLEIS 217 (475)
Q Consensus 140 ~slMvG--G~~~~~~~~~piL~~iaak~~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~~i~ 217 (475)
++.| -++++.+.+..+.+.+... ...+ +..-|. |-|-|. +..+.|++.++..+ --+.++|=
T Consensus 153 --VV~g~~Ts~e~v~~~~~~~~~lGK~------pV~v-~d~pGF----i~NRi~---~~~~~EA~~l~eeG-vA~~e~ID 215 (503)
T PRK08268 153 --VVSGLATDPAVADALYALARRWGHT------PVRA-KDTPGF----IVNHAG---RPYYTEALRVLGEG-VADFATID 215 (503)
T ss_pred --EECCCCCCHHHHHHHHHHHHHCCCE------EEEE-CCCCCC----CHHHHH---HHHHHHHHHHHHCC-CCCHHHHH
T ss_conf --8079999999999999999982980------4895-578982----088775---48999999999828-99999999
Q ss_pred HHHHH
Q ss_conf 99986
Q gi|254780716|r 218 HLFSK 222 (475)
Q Consensus 218 ~vf~~ 222 (475)
.++..
T Consensus 216 ~a~r~ 220 (503)
T PRK08268 216 AILRE 220 (503)
T ss_pred HHHHH
T ss_conf 99996
No 55
>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=98.84 E-value=4.1e-07 Score=71.98 Aligned_cols=150 Identities=22% Similarity=0.318 Sum_probs=107.5
Q ss_pred EEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCC--------CCCCCCEECCCHHHHHHHCCCCCEEEEEC
Q ss_conf 0569815711168899999789859997399899999997122--------11278403289899986057788999976
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKIS--------GLSQKVIVTKNLEQMVEAVCKPRKILMMV 76 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~--------~~~~~~~~~~s~~e~v~~l~~pr~Iil~v 76 (475)
+|.+||-|.+|.++|.-|+++|++|..|-|+++-.+++..... ....++....++++.++ ..++|++-|
T Consensus 3 kI~ViGaGswGTALA~~la~ng~~V~lw~r~~~~~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~---~ad~iv~av 79 (329)
T COG0240 3 KIAVIGAGSWGTALAKVLARNGHEVRLWGRDEEIVAEINETRENPKYLPGILLPPNLKATTDLAEALD---GADIIVIAV 79 (329)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHH---CCCEEEEEC
T ss_conf 18998178379999999996698469996289999999734767010599628863222468999972---299999978
Q ss_pred CCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHH-HHHHHHH-CCCCEECCCC-CCC---CCCCCCCCE-EEEEC-CH
Q ss_conf 990699999999972078998999679865789999-9999984-7994306754-676---000356843-78845-48
Q gi|254780716|r 77 TDGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQI-RSLQLSE-KGIYFIGIGV-SGG---VKGARSGAS-LMVGG-NE 148 (475)
Q Consensus 77 p~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~-~~~~l~~-kgi~fid~pV-SGG---~~gA~~G~s-lMvGG-~~ 148 (475)
|+ +.+.+|+.++.+.+.++.++|-++--.-..+.+ ..+.+++ .+... ++| ||- .+-|+.-|| +.+++ +.
T Consensus 80 Ps-~~~r~v~~~l~~~l~~~~~iv~~sKGie~~t~~l~seii~e~l~~~~--~~vLSGPs~A~EVa~g~pta~~vas~d~ 156 (329)
T COG0240 80 PS-QALREVLRQLKPLLLKDAIIVSATKGLEPETGRLLSEIIEEELPDNP--IAVLSGPSFAKEVAQGLPTAVVVASNDQ 156 (329)
T ss_pred CH-HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCE--EEEEECCCHHHHHHCCCCCEEEEECCCH
T ss_conf 75-78999999876433678749997446558876519999999739981--8999786079998668981799952899
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999888999998
Q gi|254780716|r 149 KAYNRVENILLS 160 (475)
Q Consensus 149 ~~~~~~~piL~~ 160 (475)
+..++++..|..
T Consensus 157 ~~a~~v~~~f~~ 168 (329)
T COG0240 157 EAAEKVQALFSS 168 (329)
T ss_pred HHHHHHHHHHCC
T ss_conf 999999998479
No 56
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=98.81 E-value=2.8e-06 Score=65.83 Aligned_cols=98 Identities=15% Similarity=0.243 Sum_probs=74.8
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCC----CC-------CEECCCHHHHHHHCCCC
Q ss_conf 99880569815711168899999789859997399899999997122112----78-------40328989998605778
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLS----QK-------VIVTKNLEQMVEAVCKP 69 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~----~~-------~~~~~s~~e~v~~l~~p 69 (475)
|+| |.|||.|.||.-+|..|.+.|++|.+.+| ++..+.+.++|-... .. +....++++ +..+
T Consensus 2 mmk--I~IiGaGAvG~~~a~~L~~aG~~V~lv~r-~~~~~~i~~~Gl~i~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 74 (341)
T PRK08229 2 MAR--ICVLGAGSIGCYLGGRLAAAGADVTLIGR-ARIGDEIRAHGLRLTDYRGRDVRVPPDAIAFSTDPAA----LATA 74 (341)
T ss_pred CCE--EEEECCCHHHHHHHHHHHHCCCCEEEEEC-HHHHHHHHHCCCEEECCCCCEEEECCCEEEECCCHHH----CCCC
T ss_conf 477--99989679999999999858998799956-7899999967909963899768963661561488656----5899
Q ss_pred CEEEEECCCHHHHHHHHHHHHHCCCCCCEEEECCCCC
Q ss_conf 8999976990699999999972078998999679865
Q gi|254780716|r 70 RKILMMVTDGDPVDQLIDKLKPLLSPEDILLDGGNSH 106 (475)
Q Consensus 70 r~Iil~vp~g~~v~~vi~~l~~~l~~g~iiID~sts~ 106 (475)
++||+++.+ .++++.++.+.|.+.++.+|+-.-|.-
T Consensus 75 D~viv~vKa-~~~~~a~~~l~~~l~~~t~il~lQNGl 110 (341)
T PRK08229 75 DLVLVTVKS-AATADAAAALAGHARPGAVVVSFQNGV 110 (341)
T ss_pred CEEEEEECC-CCHHHHHHHHHHHCCCCCEEEEEECCC
T ss_conf 989997075-788999999986438996899950477
No 57
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.77 E-value=3.7e-06 Score=64.95 Aligned_cols=192 Identities=16% Similarity=0.192 Sum_probs=120.5
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-----------CCC-------CCCCCEECCCHHHHHHH
Q ss_conf 805698157111688999997898599973998999999971-----------221-------12784032898999860
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKK-----------ISG-------LSQKVIVTKNLEQMVEA 65 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~-----------~~~-------~~~~~~~~~s~~e~v~~ 65 (475)
.+||+||.|.||..+|..++.+|++|.+||++++..+...+. +.- .-..+....++++
T Consensus 3 ~kV~ViGaG~mG~~IA~~~a~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~~dl~~---- 78 (284)
T PRK07819 3 QRVGVVGAGQMGSGIAEVCARAGVDVLVFETTEEAATAGRNRIEKSLERAVSAGKLTERERDAALARLTFTTDLED---- 78 (284)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHH----
T ss_conf 6799989778999999999957990899979889999999999999999987278987999999963706689999----
Q ss_pred CCCCCEEEEECCCHHHHHHHH-HHHHHCCCCCCEEEECCCCCHHHHHHHHHHHH----HCCCCEECCCCCCCCCCCCCCC
Q ss_conf 577889999769906999999-99972078998999679865789999999998----4799430675467600035684
Q gi|254780716|r 66 VCKPRKILMMVTDGDPVDQLI-DKLKPLLSPEDILLDGGNSHFCDTQIRSLQLS----EKGIYFIGIGVSGGVKGARSGA 140 (475)
Q Consensus 66 l~~pr~Iil~vp~g~~v~~vi-~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~----~kgi~fid~pVSGG~~gA~~G~ 140 (475)
+..++.|+=+||-.-.+..-+ .+|-..+.+.++|+-..||...-+. ++..++ =-|.||.-.|-- -+
T Consensus 79 ~~~adlViEav~E~l~~K~~l~~~ld~~~~~p~~IlaSNTS~l~is~-la~~~~~p~R~ig~HffnP~~~--------~~ 149 (284)
T PRK07819 79 LADRQLVIEAVVEDEAVKTEIFAELDKVVTDPDAVLASNTSSIPIMK-LAAATKRPGRVLGLHFFNPVPV--------LP 149 (284)
T ss_pred HCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHH-HHHCCCCHHHHCCCCCCCCCCC--------CE
T ss_conf 76599999907387888899999999742899859996588876134-4411588777115642478322--------12
Q ss_pred E--EEEE--CCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf 3--7884--54899988899999875015678618985698746789887767878889998999999996428997899
Q gi|254780716|r 141 S--LMVG--GNEKAYNRVENILLSISAKYQNSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKNPLEI 216 (475)
Q Consensus 141 s--lMvG--G~~~~~~~~~piL~~iaak~~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~~i 216 (475)
. ++.| -++++++.+..+++..-.|. +..+.+. .|. |-|-|-. ..+.|++.++..+ .-+.++|
T Consensus 150 LVEIv~g~~Ts~~~~~~~~~~~~~~l~k~-----~v~~~d~-pGF----i~NRl~~---~~~~ea~~l~~eG-va~~edI 215 (284)
T PRK07819 150 LVELVPTLVTSEATVARAEEFATEVLGKQ-----VVRCQDR-SGF----VVNALLV---PYLLSAIRMVESG-FATAEDI 215 (284)
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHHCCCC-----CEEECCC-CCC----HHHHHHH---HHHHHHHHHHHCC-CCCHHHH
T ss_conf 57771799998999999999999826966-----3686677-774----1999999---9999999999838-9999999
Q ss_pred HHHHHH
Q ss_conf 999986
Q gi|254780716|r 217 SHLFSK 222 (475)
Q Consensus 217 ~~vf~~ 222 (475)
-.++..
T Consensus 216 D~~~~~ 221 (284)
T PRK07819 216 DKAMVL 221 (284)
T ss_pred HHHHHH
T ss_conf 999876
No 58
>pfam02153 PDH Prephenate dehydrogenase. Members of this family are prephenate dehydrogenases EC:1.3.1.12 involved in tyrosine biosynthesis.
Probab=98.76 E-value=1e-05 Score=61.61 Aligned_cols=152 Identities=22% Similarity=0.292 Sum_probs=105.6
Q ss_pred HHHHHHHCC--CEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCC
Q ss_conf 899999789--859997399899999997122112784032898999860577889999769906999999999720789
Q gi|254780716|r 18 LSLNILDKG--FRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQLIDKLKPLLSP 95 (475)
Q Consensus 18 mA~nL~~~G--~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi~~l~~~l~~ 95 (475)
+|+-|-++| .+|++||++++..+...+.+... ....++ + .+..+++|++|+|- ..+.+++..+.+.+++
T Consensus 1 lAlalk~~~~~~~I~g~d~~~~~~~~A~~~g~id----~~~~~~-~---~~~~aDlvila~Pv-~~~~~~l~~l~~~~~~ 71 (258)
T pfam02153 1 IALALRRKGFNVTVIGYDIDEEAAVAAVELGLGD----EATNDI-E---AAQEADIVVLAVPI-EVTLEVLKELAPHLKE 71 (258)
T ss_pred CHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCCC----CCCCCH-H---HHCCCCEEEEECCH-HHHHHHHHHHHHHCCC
T ss_conf 9288861699967999859999999999869903----246867-7---76679999996999-9999999998865589
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHHCCCCEECC-CCCCCCC----CCC----CC-CEEEE---ECCHHHHHHHHHHHHHHH
Q ss_conf 98999679865789999999998479943067-5467600----035----68-43788---454899988899999875
Q gi|254780716|r 96 EDILLDGGNSHFCDTQIRSLQLSEKGIYFIGI-GVSGGVK----GAR----SG-ASLMV---GGNEKAYNRVENILLSIS 162 (475)
Q Consensus 96 g~iiID~sts~~~~t~~~~~~l~~kgi~fid~-pVSGG~~----gA~----~G-~slMv---GG~~~~~~~~~piL~~ia 162 (475)
+.+|.|.|.+-..-..... .....+++|++. |+.|.+. .|. .| +.+++ +.+.+.++.++.+++.++
T Consensus 72 ~~ivtDv~SvK~~i~~~~~-~~~~~~~~fvg~HPMaG~e~sG~~~a~~~LF~~~~~il~p~~~~~~~~~~~v~~l~~~lG 150 (258)
T pfam02153 72 GALITDVGSVKVEIVKDAE-QLLSDGVGFIPGHPMAGTEKSGPDAARANLFENAPVILTPTEKTDTEALALVRELLEGIG 150 (258)
T ss_pred CCEEEECCCCCHHHHHHHH-HHCCCCCCEECCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHCC
T ss_conf 9589953555579999999-855567864605886478767701100125417159961888887999999999999869
Q ss_pred CCCCCCCEEEEECCCCHHHHHHH
Q ss_conf 01567861898569874678988
Q gi|254780716|r 163 AKYQNSPCCALLGPDGSGHFVKM 185 (475)
Q Consensus 163 ak~~~~~cv~y~G~~GsGh~vKM 185 (475)
++ +..+-+.-.=..+=+
T Consensus 151 a~------~~~m~~~~HD~~~A~ 167 (258)
T pfam02153 151 AK------VILMDPEEHDRVVAL 167 (258)
T ss_pred CE------EEECCHHHHHHHHHH
T ss_conf 96------998277778899999
No 59
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=98.76 E-value=7e-06 Score=62.88 Aligned_cols=114 Identities=15% Similarity=0.135 Sum_probs=80.2
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCC---CCCCEECCCHHHHHHHCCCCCEEEEECC
Q ss_conf 9988056981571116889999978985999739989999999712211---2784032898999860577889999769
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGL---SQKVIVTKNLEQMVEAVCKPRKILMMVT 77 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~---~~~~~~~~s~~e~v~~l~~pr~Iil~vp 77 (475)
|+. +|.+||.|.||.-+|.+|.++|++|..++|.+++.+.+.+.+.-. ........-..+..+.....++||+++.
T Consensus 1 m~M-kI~IiGaGAiG~~~a~~L~~ag~dV~lv~r~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~D~vivavK 79 (305)
T PRK05708 1 MSM-TWHILGAGSLGSLWACRLARAGLPVRLILRDRQRLAAYQQAGGLTLVEQGQASLYAIPAETADAPEPIHRLLVACK 79 (305)
T ss_pred CCC-EEEEECCCHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCCCEEEEECCCEEEEECCCCCCCCCCCCCEEEEEEC
T ss_conf 998-8999882399999999998489973999947899999997899899868955787404657665788778999804
Q ss_pred CHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 9069999999997207899899967986578999999999
Q gi|254780716|r 78 DGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQL 117 (475)
Q Consensus 78 ~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l 117 (475)
+. ++++++..+.|.+.++..||-.-|-- ....++++.+
T Consensus 80 ~~-~~~~a~~~l~~~l~~~t~Iv~lQNGl-g~~e~la~~~ 117 (305)
T PRK05708 80 AY-DAEPAVASLAHRLAPGAELLLLQNGL-GSQDAVAARV 117 (305)
T ss_pred CC-CHHHHHHHHHHHCCCCCEEEEECCCC-CHHHHHHHHC
T ss_conf 25-68999999886449995899943776-4799999977
No 60
>COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]
Probab=98.75 E-value=1.7e-07 Score=74.77 Aligned_cols=242 Identities=17% Similarity=0.193 Sum_probs=133.8
Q ss_pred EEEEEECCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHH
Q ss_conf 0569815711168899999789----859997399899999997122112784032898999860577889999769906
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKG----FRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGD 80 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G----~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~ 80 (475)
+|||||.|+||.+|+.-|.++| .+|.+.||+.++.+.+.++.... .+.+..++++. .++||++|+. .
T Consensus 3 ~IgfIG~G~Mg~Ai~~gl~~~g~~~~~~I~v~~~~~e~~~~l~~~~g~~-----~~~~~~~~~~~---advv~LavKP-q 73 (266)
T COG0345 3 KIGFIGAGNMGEAILSGLLKSGALPPEEIIVTNRSEEKRAALAAEYGVV-----TTTDNQEAVEE---ADVVFLAVKP-Q 73 (266)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCCCC-----CCCCHHHHHHH---CCEEEEEECH-H
T ss_conf 5899846889999999999668998023898379999999999984985-----56867988740---8989998482-7
Q ss_pred HHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEEC-CCCCCCCCCCCCCCEEEEE---CCHHHHHHHHH
Q ss_conf 9999999997207899899967986578999999999847994306-7546760003568437884---54899988899
Q gi|254780716|r 81 PVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIG-IGVSGGVKGARSGASLMVG---GNEKAYNRVEN 156 (475)
Q Consensus 81 ~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid-~pVSGG~~gA~~G~slMvG---G~~~~~~~~~p 156 (475)
...+|+..+.+ ..++.++|-.----. ...+...+. +...+- ||= .+.-...|-+.... .+++..+.++.
T Consensus 74 ~~~~vl~~l~~-~~~~~lvISiaAGv~--~~~l~~~l~--~~~vvR~MPN--t~a~vg~g~t~i~~~~~~~~~~~~~v~~ 146 (266)
T COG0345 74 DLEEVLSKLKP-LTKDKLVISIAAGVS--IETLERLLG--GLRVVRVMPN--TPALVGAGVTAISANANVSEEDKAFVEA 146 (266)
T ss_pred HHHHHHHHHHC-CCCCCEEEEEECCCC--HHHHHHHCC--CCCEEEECCC--HHHHHCCCCEEEECCCCCCHHHHHHHHH
T ss_conf 68999997323-568887999707997--999998748--9966996788--5889717522651376589889999999
Q ss_pred HHHHHHCCCCCCCEEEEECCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHH
Q ss_conf 99987501567861898569874678988776--7878889998999999996428997899999986068844307999
Q gi|254780716|r 157 ILLSISAKYQNSPCCALLGPDGSGHFVKMIHN--GIEYANMQLIADIYGILRDSLNKNPLEISHLFSKWDTGKLSSYLIK 234 (475)
Q Consensus 157 iL~~iaak~~~~~cv~y~G~~GsGh~vKMVhN--gIey~~mq~iaE~~~~l~~~~~~~~~~i~~vf~~w~~~~~~syLl~ 234 (475)
+|++++. +..+.+.---.+.=+.=- +.-|-+++.++++- .+ .+++.++-.+.-. -++.
T Consensus 147 l~~~~G~-------v~~v~E~~~da~TaisGSgPAyv~~~iEal~~ag--v~--~Gl~~~~A~~l~~---------~t~~ 206 (266)
T COG0345 147 LLSAVGK-------VVEVEESLMDAVTALSGSGPAYVFLFIEALADAG--VR--LGLPREEARELAA---------QTVA 206 (266)
T ss_pred HHHHCCC-------EEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHH--HH--CCCCHHHHHHHHH---------HHHH
T ss_conf 9982598-------6996467714999984486899999999999999--98--5999999999999---------9999
Q ss_pred HHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf 99999974056799952001023336587167789887751788851467778
Q gi|254780716|r 235 ITAEILSSSDTITGMPIIDVICDKASQKGTGIRSIIEGHKLSSSMTITETAIF 287 (475)
Q Consensus 235 i~~~il~~k~~~~g~~lid~i~d~~~~kgTg~Wt~~~a~~lgvp~p~i~~av~ 287 (475)
=+++.+.+..+ .-..+.|.+-.+|=-.=.....|+.+-=-..+..|+.
T Consensus 207 Gaakll~e~~~-----~p~~Lr~~VtSPGGtTiagl~~le~~g~~~~v~~av~ 254 (266)
T COG0345 207 GAAKLLLESGE-----HPAELRDQVTSPGGTTIAGLRVLEEDGFRGAVIEAVE 254 (266)
T ss_pred HHHHHHHHCCC-----CHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHH
T ss_conf 99999986699-----9799998575998408999999988073999999999
No 61
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=98.74 E-value=2.6e-05 Score=58.71 Aligned_cols=206 Identities=15% Similarity=0.208 Sum_probs=140.3
Q ss_pred EEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCC--------------CCCCCEECCCHHHHHHHCCCCC
Q ss_conf 05698157111688999997898599973998999999971221--------------1278403289899986057788
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISG--------------LSQKVIVTKNLEQMVEAVCKPR 70 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~--------------~~~~~~~~~s~~e~v~~l~~pr 70 (475)
+|.+||.|-.|.--|.-|++.|++|...|.+++|++.+.+.... ....+....+.++.+ ...+
T Consensus 2 kI~viGtGYVGLv~g~~lA~~GHeVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~~a~---~~ad 78 (414)
T COG1004 2 KITVIGTGYVGLVTGACLAELGHEVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRFTTDYEEAV---KDAD 78 (414)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCEEEECCHHHHH---HCCC
T ss_conf 1589888556887899998709848999578899999867999976705899998462357279874788896---2597
Q ss_pred EEEEECCCH---------HHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCC--
Q ss_conf 999976990---------699999999972078998999679865789999999998479943067546760003568--
Q gi|254780716|r 71 KILMMVTDG---------DPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGVKGARSG-- 139 (475)
Q Consensus 71 ~Iil~vp~g---------~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~~gA~~G-- 139 (475)
++|++||.+ ..|++|+..+.+.++...+||.=||..+-.+.+..+.+.+..-.= |-.|--.|+=-|.|
T Consensus 79 v~fIavgTP~~~dg~aDl~~V~ava~~i~~~~~~~~vvV~KSTVPvGt~~~v~~~i~~~~~~~-~f~v~~NPEFLREG~A 157 (414)
T COG1004 79 VVFIAVGTPPDEDGSADLSYVEAVAKDIGEILDGKAVVVIKSTVPVGTTEEVRAKIREENSGK-DFEVASNPEFLREGSA 157 (414)
T ss_pred EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCC-CCEEECCHHHHCCCCH
T ss_conf 799974899998897328999999999986267873999848879884699999998634677-7507618678447523
Q ss_pred ------C-EEEEECCHH-HHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf ------4-378845489-99888999998750156786189856987467898877678788899989999999964289
Q gi|254780716|r 140 ------A-SLMVGGNEK-AYNRVENILLSISAKYQNSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNK 211 (475)
Q Consensus 140 ------~-slMvGG~~~-~~~~~~piL~~iaak~~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~ 211 (475)
| -+.+|...+ +-+.++.+++.+.. .+.| +.+++. -+.-.+|...|.-.=--..-|-|.=+++++ .+.
T Consensus 158 v~D~~~PdRIViG~~~~~a~~~~~ely~~~~~--~~~p-~l~t~~-~~AE~IKyaaNafLAtKIsFiNEia~ice~-~g~ 232 (414)
T COG1004 158 VYDFLYPDRIVIGVRSERAAAVLRELYAPFLR--QDVP-ILFTDL-REAELIKYAANAFLATKISFINEIANICEK-VGA 232 (414)
T ss_pred HHHCCCCCEEEECCCCHHHHHHHHHHHHHHHH--CCCC-EEEECC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCC
T ss_conf 44315898389925771689999999753420--4998-899560-299999999889999999999999999999-698
Q ss_pred CHHHHHHH
Q ss_conf 97899999
Q gi|254780716|r 212 NPLEISHL 219 (475)
Q Consensus 212 ~~~~i~~v 219 (475)
+-.++++-
T Consensus 233 D~~~V~~g 240 (414)
T COG1004 233 DVKQVAEG 240 (414)
T ss_pred CHHHHHHH
T ss_conf 99999987
No 62
>COG1250 FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]
Probab=98.73 E-value=2.4e-06 Score=66.27 Aligned_cols=194 Identities=19% Similarity=0.257 Sum_probs=121.9
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCC----C--------------CCCEECCCHHHH
Q ss_conf 9988056981571116889999978985999739989999999712211----2--------------784032898999
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGL----S--------------QKVIVTKNLEQM 62 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~----~--------------~~~~~~~s~~e~ 62 (475)
|.-.+||+||-|.||.++|..++..||+|..+|++++..+...+..... . ..+.+..++.
T Consensus 1 ~~i~kv~ViGaG~MG~gIA~~~A~~G~~V~l~D~~~~~~~~~~~~i~~~l~k~~~~g~l~~~~~~~~l~~i~~~~~~~-- 78 (307)
T COG1250 1 MEIKKVAVIGAGVMGAGIAAVFALAGYDVVLKDISPEALERALAYIEKNLEKLVEKGKLTEEEADAALARITPTTDLA-- 78 (307)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHH--
T ss_conf 974079997246020999999973499569995898999999999999999888627877455999975152557665--
Q ss_pred HHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHH----HCCCCEECCCCCCCCCCCCC
Q ss_conf 86057788999976990699999999972078998999679865789999999998----47994306754676000356
Q gi|254780716|r 63 VEAVCKPRKILMMVTDGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLS----EKGIYFIGIGVSGGVKGARS 138 (475)
Q Consensus 63 v~~l~~pr~Iil~vp~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~----~kgi~fid~pVSGG~~gA~~ 138 (475)
.++.++.|+--++-.-.+..-+..-++.+-+.+.|+-..||+..-+.- ++.++ --|+||...|.-.
T Consensus 79 --~l~~~DlVIEAv~E~levK~~vf~~l~~~~~~~aIlASNTSsl~it~i-a~~~~rper~iG~HFfNP~~~m------- 148 (307)
T COG1250 79 --ALKDADLVIEAVVEDLELKKQVFAELEALAKPDAILASNTSSLSITEL-AEALKRPERFIGLHFFNPVPLM------- 148 (307)
T ss_pred --HHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHH-HHHHCCCHHEEEEECCCCCCCC-------
T ss_conf --663088788853015999999999988655988578622677878999-9873793237987526987711-------
Q ss_pred CCEE-EEEC---CHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
Q ss_conf 8437-8845---48999888999998750156786189856987467898877678788899989999999964289978
Q gi|254780716|r 139 GASL-MVGG---NEKAYNRVENILLSISAKYQNSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKNPL 214 (475)
Q Consensus 139 G~sl-MvGG---~~~~~~~~~piL~~iaak~~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~ 214 (475)
+.+ .+.| ++++++.+..+.+.+. |. | .+...-.|. |-|=|- ...+.|++.++.++ ..+++
T Consensus 149 -~LVEvI~g~~T~~e~~~~~~~~~~~ig-K~---~---vv~~D~pGF----i~NRil---~~~~~eA~~l~~eG-va~~e 212 (307)
T COG1250 149 -PLVEVIRGEKTSDETVERVVEFAKKIG-KT---P---VVVKDVPGF----IVNRLL---AALLNEAIRLLEEG-VATPE 212 (307)
T ss_pred -EEEEEECCCCCCHHHHHHHHHHHHHCC-CC---C---EEECCCCCE----EHHHHH---HHHHHHHHHHHHHC-CCCHH
T ss_conf -058881688789999999999999859-98---8---742678861----257778---99999999999808-99999
Q ss_pred HHHHHHHH
Q ss_conf 99999986
Q gi|254780716|r 215 EISHLFSK 222 (475)
Q Consensus 215 ~i~~vf~~ 222 (475)
+|-+++..
T Consensus 213 ~ID~~~~~ 220 (307)
T COG1250 213 EIDAAMRQ 220 (307)
T ss_pred HHHHHHHH
T ss_conf 99999986
No 63
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=98.73 E-value=8.6e-07 Score=69.63 Aligned_cols=153 Identities=19% Similarity=0.217 Sum_probs=97.2
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHH
Q ss_conf 99880569815711168899999789859997399899999997122112784032898999860577889999769906
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGD 80 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~ 80 (475)
|++ ++++|.|+||+++|++|++.|++|.+-+|..++..+..++. ....+++ .+..|.++ ..++|++-||- .
T Consensus 1 m~~--~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~--l~~~i~~-~~~~dA~~---~aDVVvLAVP~-~ 71 (211)
T COG2085 1 MMI--IAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAA--LGPLITG-GSNEDAAA---LADVVVLAVPF-E 71 (211)
T ss_pred CCE--EEEECCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH--HCCCCCC-CCHHHHHH---CCCEEEEECCH-H
T ss_conf 917--99962571878999999967973999647880678899986--4565334-77688884---39989995457-8
Q ss_pred HHHHHHHHHHHCCCCCCEEEECCCCC---H------------HHHHHHHHHHHHC----CCCEECCCCC-CCCCCCCCCC
Q ss_conf 99999999972078998999679865---7------------8999999999847----9943067546-7600035684
Q gi|254780716|r 81 PVDQLIDKLKPLLSPEDILLDGGNSH---F------------CDTQIRSLQLSEK----GIYFIGIGVS-GGVKGARSGA 140 (475)
Q Consensus 81 ~v~~vi~~l~~~l~~g~iiID~sts~---~------------~~t~~~~~~l~~k----gi~fid~pVS-GG~~gA~~G~ 140 (475)
++-+++.++...+. |+|+||.+|.. . ..+...++.+... ..+-+.+.+- ...... ...
T Consensus 72 a~~~v~~~l~~~~~-~KIvID~tnp~~~~~~~~~~~~~~~~~saae~va~~lp~akVVkAFn~i~a~~l~~~~~~~-~~~ 149 (211)
T COG2085 72 AIPDVLAELRDALG-GKIVIDATNPIEVNGEPGDLYLVPSEGSAAEIVAKLLPGAKVVKAFNTIPAAVLADLAKPG-GRR 149 (211)
T ss_pred HHHHHHHHHHHHHC-CEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHCCCCHHHHCCCCCCC-CCE
T ss_conf 77769999998709-9099966887544688301036888885999999977983014655035787731377768-756
Q ss_pred -EEEEECCHHHHHHHHHHHHHHHCC
Q ss_conf -378845489998889999987501
Q gi|254780716|r 141 -SLMVGGNEKAYNRVENILLSISAK 164 (475)
Q Consensus 141 -slMvGG~~~~~~~~~piL~~iaak 164 (475)
.+.+|-|.++-+.+..+.+.++-.
T Consensus 150 ~v~vagDD~~Ak~~v~~L~~~iG~~ 174 (211)
T COG2085 150 DVLVAGDDAEAKAVVAELAEDIGFR 174 (211)
T ss_pred EEEEECCCHHHHHHHHHHHHHCCCC
T ss_conf 6898459499999999999962966
No 64
>pfam02737 3HCDH_N 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain. This family also includes lambda crystallin.
Probab=98.72 E-value=7.3e-07 Score=70.14 Aligned_cols=146 Identities=16% Similarity=0.269 Sum_probs=95.6
Q ss_pred EEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCC------------------CCCCCCEECCCHHHHHHHC
Q ss_conf 0569815711168899999789859997399899999997122------------------1127840328989998605
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKIS------------------GLSQKVIVTKNLEQMVEAV 66 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~------------------~~~~~~~~~~s~~e~v~~l 66 (475)
+||+||.|.||..+|..++.+|++|.+||++++..+...+.-. .....+.+..+++++.
T Consensus 1 kV~ViGaG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~--- 77 (180)
T pfam02737 1 KVAVIGAGTMGAGIAQVFARAGLEVVLVDISEEALEKARARIEKSLARLVEKGRLTEEDVDAVLARISFTTDLADAV--- 77 (180)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHC---
T ss_conf 98999978899999999996799399997998999999999999899999725675676999985241058899975---
Q ss_pred CCCCEEEEECCCHHHHHH-HHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHC----CCCEECCCCCCCCCCCCCCCE
Q ss_conf 778899997699069999-999997207899899967986578999999999847----994306754676000356843
Q gi|254780716|r 67 CKPRKILMMVTDGDPVDQ-LIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEK----GIYFIGIGVSGGVKGARSGAS 141 (475)
Q Consensus 67 ~~pr~Iil~vp~g~~v~~-vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~k----gi~fid~pVSGG~~gA~~G~s 141 (475)
..+.|+=++|..-.+.. ++.++-..+.++.|+ -..||... ..++++.+... |.||...|-- -|.
T Consensus 78 -~adlViEav~E~l~iK~~l~~~l~~~~~~~~Il-aSnTS~l~-is~la~~~~~p~R~ig~HffnP~~~--------~pL 146 (180)
T pfam02737 78 -DADLVIEAVPENLDLKRELFAELDAIAPPDAIL-ASNTSSLS-ITELAAATKRPERFIGLHFFNPPPL--------MPL 146 (180)
T ss_pred -CCCEEEECCCCCHHHHHHHHHHHHHHCHHHEEE-EECCCCCC-HHHHHHHCCCCCEEEEECCCCCCCC--------CCE
T ss_conf -899999925176889999999999743033088-75267689-9999974798766999756887776--------853
Q ss_pred --EEEEC--CHHHHHHHHHHHHHHHCC
Q ss_conf --78845--489998889999987501
Q gi|254780716|r 142 --LMVGG--NEKAYNRVENILLSISAK 164 (475)
Q Consensus 142 --lMvGG--~~~~~~~~~piL~~iaak 164 (475)
++.|. ++++.+++..+++.+...
T Consensus 147 VEIv~g~~T~~~~~~~~~~~~~~lgk~ 173 (180)
T pfam02737 147 VEVVRGEKTSPETVATVVELAKKIGKT 173 (180)
T ss_pred EEECCCCCCCHHHHHHHHHHHHHCCCE
T ss_conf 888389998999999999999987996
No 65
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=98.68 E-value=3.4e-05 Score=57.83 Aligned_cols=97 Identities=15% Similarity=0.152 Sum_probs=72.9
Q ss_pred CCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCC--------CCCEECCCHHHHHHHCCCCCEEEE
Q ss_conf 880569815711168899999789859997399899999997122112--------784032898999860577889999
Q gi|254780716|r 3 QADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLS--------QKVIVTKNLEQMVEAVCKPRKILM 74 (475)
Q Consensus 3 k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~--------~~~~~~~s~~e~v~~l~~pr~Iil 74 (475)
+++|+|||.|.||.-+|..|++.|++|....|.. .+.+.++|-... ..+..+.++++ +...++||+
T Consensus 5 ~~kI~IiGaGAiG~~~a~~L~~aG~~V~li~r~~--~~ai~~~Gl~i~~~~g~~~~~~~~~~~~~~~----~~~~D~viv 78 (313)
T PRK06249 5 TPRIAIIGTGAIGGFYGAMLARAGFDVHFLLRSD--YEAVRENGLQVDSVHGDFHLPQVQAYRSAED----MPPCDWVLV 78 (313)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH--HHHHHHCCEEEEECCCCEEECCCEEECCHHH----CCCCCEEEE
T ss_conf 8889999914999999999996699569996755--9999868859996698289768402369778----399658999
Q ss_pred ECCCHHHHHHHHHHHHHCCCCCCEEEECCCCC
Q ss_conf 76990699999999972078998999679865
Q gi|254780716|r 75 MVTDGDPVDQLIDKLKPLLSPEDILLDGGNSH 106 (475)
Q Consensus 75 ~vp~g~~v~~vi~~l~~~l~~g~iiID~sts~ 106 (475)
++.+. +++++...+.+.+.++.+|+-.-|.-
T Consensus 79 ~vKs~-~~~~~~~~l~~~~~~~t~il~lQNG~ 109 (313)
T PRK06249 79 GLKTT-ANALLAPLIPQVAAPGAKVLLLQNGL 109 (313)
T ss_pred ECCCC-CHHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf 53667-78999998786448995899944766
No 66
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=98.66 E-value=2e-05 Score=59.60 Aligned_cols=98 Identities=17% Similarity=0.280 Sum_probs=72.4
Q ss_pred EEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCC---C----CCEECCCHHHHHHHCCCCCEEEEECC
Q ss_conf 0569815711168899999789859997399899999997122112---7----84032898999860577889999769
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLS---Q----KVIVTKNLEQMVEAVCKPRKILMMVT 77 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~---~----~~~~~~s~~e~v~~l~~pr~Iil~vp 77 (475)
+|.|+|.|.||.=+|..|.++|++|+.+-|. +..+.+.+.|-... . ......+.++ .....++||+++.
T Consensus 2 kI~I~GaGAiG~~~a~~L~~~g~~V~lv~r~-~~~~~i~~~Gl~i~~~~~~~~~~~~~~~~~~~---~~~~~D~viva~K 77 (306)
T PRK12921 2 KIAVVGAGAVGGTFGARLLEAGRDVTFLGRS-ARAEALREKGLVIRSDHGDVTVPGPVITDPEE---ITGPFDLVILAVK 77 (306)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEEEC-CHHHHHHHCCEEEEECCCEEEEECCCCCCCHH---HCCCCCEEEEEEC
T ss_conf 8999992499999999998369988999700-09999997896999779769980610508056---5689768999704
Q ss_pred CHHHHHHHHHHHHHCCCCCCEEEECCCCCH
Q ss_conf 906999999999720789989996798657
Q gi|254780716|r 78 DGDPVDQLIDKLKPLLSPEDILLDGGNSHF 107 (475)
Q Consensus 78 ~g~~v~~vi~~l~~~l~~g~iiID~sts~~ 107 (475)
+ .++++++..+.+.+.++.+|+-+-|.-.
T Consensus 78 s-~~~~~a~~~l~~~~~~~t~il~lQNG~g 106 (306)
T PRK12921 78 A-YQLDAAIPDLKPLVGEDTVIIPLQNGIG 106 (306)
T ss_pred C-CCHHHHHHHHHHHCCCCCEEEEECCCCC
T ss_conf 5-6779999999863399948999348775
No 67
>COG1893 ApbA Ketopantoate reductase [Coenzyme metabolism]
Probab=98.60 E-value=2.4e-05 Score=58.94 Aligned_cols=175 Identities=18% Similarity=0.220 Sum_probs=103.3
Q ss_pred EEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCE---ECCCHHHHHHHCCCCCEEEEECCCHHH
Q ss_conf 05698157111688999997898599973998999999971221127840---328989998605778899997699069
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVI---VTKNLEQMVEAVCKPRKILMMVTDGDP 81 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~---~~~s~~e~v~~l~~pr~Iil~vp~g~~ 81 (475)
+|.++|.|.||.-++..|.++|.+|..+.|++. .+++.+.|-....... .......-.+.+..++.|++.+.+ .+
T Consensus 2 kI~IlGaGAvG~l~g~~L~~~g~~V~~~~R~~~-~~~l~~~GL~i~~~~~~~~~~~~~~~~~~~~~~~Dlviv~vKa-~q 79 (307)
T COG1893 2 KILILGAGAIGSLLGARLAKAGHDVTLLVRSRR-LEALKKKGLRIEDEGGNFTTPVVAATDAEALGPADLVIVTVKA-YQ 79 (307)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEECHHH-HHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECC-CC
T ss_conf 599987878999999999858995799810899-9999878979981688522443235673336788889998042-23
Q ss_pred HHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHC----CCCEECCCCCC-C-CCCCCCCC-E--EEEECCHHHHH
Q ss_conf 999999997207899899967986578999999999847----99430675467-6-00035684-3--78845489998
Q gi|254780716|r 82 VDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEK----GIYFIGIGVSG-G-VKGARSGA-S--LMVGGNEKAYN 152 (475)
Q Consensus 82 v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~k----gi~fid~pVSG-G-~~gA~~G~-s--lMvGG~~~~~~ 152 (475)
+++++..+.|.+.+...|+-.-|.--..- ++.+..... |+.+.++.-.| | ..-+..|. . .+.|+.++.++
T Consensus 80 ~~~al~~l~~~~~~~t~vl~lqNG~g~~e-~l~~~~~~~~il~G~~~~~a~~~~~g~v~~~g~g~~~ig~~~~~~~~~~~ 158 (307)
T COG1893 80 LEEALPSLAPLLGPNTVVLFLQNGLGHEE-ELRKILPKETVLGGVTTHGAVREGPGHVVHTGLGDTVIGELRGGRDELVK 158 (307)
T ss_pred HHHHHHHHHHHCCCCCEEEEEECCCCHHH-HHHHHCCCCEEEEEEEECCEEECCCCEEEEECCCCEEEECCCCCCHHHHH
T ss_conf 89999998730799848999708972699-99873883428989984243871784599936785798426776307899
Q ss_pred HHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 889999987501567861898569874678988776
Q gi|254780716|r 153 RVENILLSISAKYQNSPCCALLGPDGSGHFVKMIHN 188 (475)
Q Consensus 153 ~~~piL~~iaak~~~~~cv~y~G~~GsGh~vKMVhN 188 (475)
.+...|+.-.-. +.+....=.....|.+-|
T Consensus 159 ~i~~~~~~a~~~------~~~~~di~~~~w~Kl~~N 188 (307)
T COG1893 159 ALAELFKEAGLE------VELHPDILAAIWRKLVVN 188 (307)
T ss_pred HHHHHHHHCCCC------EEECHHHHHHHHHHHHHH
T ss_conf 999999828987------688677999999888863
No 68
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=98.59 E-value=3e-05 Score=58.29 Aligned_cols=192 Identities=14% Similarity=0.211 Sum_probs=119.0
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-----------CCC-------CCCCCEECCCHHHHHHH
Q ss_conf 805698157111688999997898599973998999999971-----------221-------12784032898999860
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKK-----------ISG-------LSQKVIVTKNLEQMVEA 65 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~-----------~~~-------~~~~~~~~~s~~e~v~~ 65 (475)
.+||+||-|.||..+|..++.+|++|.++|++++..+.-.+. +.- ....+++..+.++
T Consensus 314 ~~v~ViGaG~MG~GIA~~~a~aG~~V~l~D~~~e~l~~g~~~~~~~~~~~v~~g~~~~~~~~~~l~ri~~~~~~~~---- 389 (715)
T PRK11730 314 KQAAVLGAGIMGGGIAYQSASKGVPVIMKDINQKALDLGMNEAAKLLNKQVERGRIDGLKMAGVLSTITPTLDYAG---- 389 (715)
T ss_pred CEEEEECCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHH----
T ss_conf 2799978771079999999957995799978999999999999999999986489987999999956874154024----
Q ss_pred CCCCCEEEEECCCHHHHHHHH-HHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHH----CCCCEECCCC-CCCCCCCCCC
Q ss_conf 577889999769906999999-999720789989996798657899999999984----7994306754-6760003568
Q gi|254780716|r 66 VCKPRKILMMVTDGDPVDQLI-DKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSE----KGIYFIGIGV-SGGVKGARSG 139 (475)
Q Consensus 66 l~~pr~Iil~vp~g~~v~~vi-~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~----kgi~fid~pV-SGG~~gA~~G 139 (475)
+..+++||=.|+..-.++.-+ .++-+.+.++.|+-. .||... -.++++.++. -|.||...+- .--++
T Consensus 390 l~~~DlVIEAV~E~l~~K~~vf~~l~~~~~~~aIlAs-NTSsl~-i~~lA~~~~~Per~iG~HFfnP~~~m~LVE----- 462 (715)
T PRK11730 390 FKDVDVVVEAVVENPKVKAAVLAEVEQKVREDTILAS-NTSTIS-ISLLAKALKRPENFCGMHFFNPVHRMPLVE----- 462 (715)
T ss_pred HCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEE-CCCCCC-HHHHHHHCCCCCCEEEEEECCCCCCCCEEE-----
T ss_conf 3358889985436588999999999865587538851-576577-899997516821156522148844164488-----
Q ss_pred CEEEEE--CCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
Q ss_conf 437884--548999888999998750156786189856987467898877678788899989999999964289978999
Q gi|254780716|r 140 ASLMVG--GNEKAYNRVENILLSISAKYQNSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKNPLEIS 217 (475)
Q Consensus 140 ~slMvG--G~~~~~~~~~piL~~iaak~~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~~i~ 217 (475)
+..| -++++.+.+..+.+.+... ...++ ...|- +-|-|- +-.+.|+..++..+ -++.+|-
T Consensus 463 --Vv~g~~Ts~~t~~~~~~~~~~lgK~------pVvv~-d~pGF----i~NRil---~~~~~ea~~l~~eG--a~~~~ID 524 (715)
T PRK11730 463 --VIRGEKTSDETIATVVAYASKMGKT------PIVVN-DCPGF----FVNRVL---FPYFAGFSQLLRDG--ADFRQID 524 (715)
T ss_pred --EECCCCCCHHHHHHHHHHHHHCCCC------EEEEE-CCCCH----HHHHHH---HHHHHHHHHHHHCC--CCHHHHH
T ss_conf --8168999999999999999981982------38982-46860----587899---99999999999879--9999999
Q ss_pred HHHH-HCC
Q ss_conf 9998-606
Q gi|254780716|r 218 HLFS-KWD 224 (475)
Q Consensus 218 ~vf~-~w~ 224 (475)
..+. .|.
T Consensus 525 ~a~~~~~G 532 (715)
T PRK11730 525 KVMEKQFG 532 (715)
T ss_pred HHHHHCCC
T ss_conf 99987479
No 69
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=98.58 E-value=5.4e-07 Score=71.12 Aligned_cols=110 Identities=17% Similarity=0.254 Sum_probs=90.5
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 80569815711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
.++|+||+|+.|+..|..+..-|++|.+||+...+.. ..........+++++....+ +|.+.+|-.+.+.
T Consensus 143 kTvGIiG~G~IG~~va~~l~afgm~v~~~d~~~~~~~-------~~~~~~~~~~~Ld~lL~~aD---iv~lh~PlT~eT~ 212 (324)
T COG0111 143 KTVGIIGLGRIGRAVAKRLKAFGMKVIGYDPYSPRER-------AGVDGVVGVDSLDELLAEAD---ILTLHLPLTPETR 212 (324)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCC-------CCCCCCEECCCHHHHHHHCC---EEEECCCCCCHHH
T ss_conf 8899989878999999999867986999889886000-------12356311026999987699---9998389981222
Q ss_pred HHH-HHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 999-9997207899899967986578999999999847994
Q gi|254780716|r 84 QLI-DKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIY 123 (475)
Q Consensus 84 ~vi-~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~ 123 (475)
..+ .+.+..+++|.++|.++-...-|...+.+.+++..|.
T Consensus 213 g~i~~~~~a~MK~gailIN~aRG~vVde~aL~~AL~~G~i~ 253 (324)
T COG0111 213 GLINAEELAKMKPGAILINAARGGVVDEDALLAALDSGKIA 253 (324)
T ss_pred CCCCHHHHHCCCCCCEEEECCCCCEECHHHHHHHHHCCCCC
T ss_conf 13799999448998199988875203589999999709831
No 70
>KOG2380 consensus
Probab=98.57 E-value=5.3e-06 Score=63.77 Aligned_cols=149 Identities=17% Similarity=0.135 Sum_probs=102.4
Q ss_pred EEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHH
Q ss_conf 05698157111688999997898599973998999999971221127840328989998605778899997699069999
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQ 84 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~ 84 (475)
.||+||+|+||.=+|..|.++|+.|.++||+. .++..+..+ ...++.+.|+|+ ..|++|++|+.. ..++.
T Consensus 54 ~IaIIGfGnmGqflAetli~aGh~li~hsRsd--yssaa~~yg-----~~~ft~lhdlce--rhpDvvLlctsi-lsiek 123 (480)
T KOG2380 54 VIAIIGFGNMGQFLAETLIDAGHGLICHSRSD--YSSAAEKYG-----SAKFTLLHDLCE--RHPDVVLLCTSI-LSIEK 123 (480)
T ss_pred EEEEEECCCHHHHHHHHHHHCCCEEEECCCCH--HHHHHHHHC-----CCCCCCHHHHHH--CCCCEEEEEEHH-HHHHH
T ss_conf 89997137088999999986486267447500--689999741-----233461777875--489979997025-40998
Q ss_pred HHHHHHHC-CCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCC-CC--CCCCE-EE---EECC----HHHHH
Q ss_conf 99999720-789989996798657899999999984799430675467600-03--56843-78---8454----89998
Q gi|254780716|r 85 LIDKLKPL-LSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGVK-GA--RSGAS-LM---VGGN----EKAYN 152 (475)
Q Consensus 85 vi~~l~~~-l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~~-gA--~~G~s-lM---vGG~----~~~~~ 152 (475)
|+...-+. ++.|.+++|-....- -.+....+--.+....+-+----||+ +. -.|+- +. --|. .+-++
T Consensus 124 ilatypfqrlrrgtlfvdvlSvKe-fek~lfekYLPkdfDIlctHpmfGPksvnh~wqglpfVydkvRig~~~~r~ercE 202 (480)
T KOG2380 124 ILATYPFQRLRRGTLFVDVLSVKE-FEKELFEKYLPKDFDILCTHPMFGPKSVNHEWQGLPFVYDKVRIGYAASRPERCE 202 (480)
T ss_pred HHHHCCCHHHCCCEEEEEEEECCH-HHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHH
T ss_conf 998568034202106742343140-4789999858432666864477687768876666865999742143224628899
Q ss_pred HHHHHHHHHHCC
Q ss_conf 889999987501
Q gi|254780716|r 153 RVENILLSISAK 164 (475)
Q Consensus 153 ~~~piL~~iaak 164 (475)
.+..||.....+
T Consensus 203 ~fleIf~cegck 214 (480)
T KOG2380 203 FFLEIFACEGCK 214 (480)
T ss_pred HHHHHHHHCCCE
T ss_conf 999999852770
No 71
>PRK09287 6-phosphogluconate dehydrogenase; Validated
Probab=98.57 E-value=1e-06 Score=69.10 Aligned_cols=110 Identities=15% Similarity=0.241 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH---HHCCCEEEHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 7889999999999999999999999999611014566798899998---5189468537899999998708885200079
Q gi|254780716|r 316 FDSFVKDLENALYASTILSFTQGFWVIGKSSEKYSWSLSLATIARI---WRAGCIIRSQILNDIVKSLTEDPSSTNLLNI 392 (475)
Q Consensus 316 ~~~~i~~L~~a~~~~~i~syaQGf~ll~~as~~y~w~l~l~~ia~i---W~~GCIIrs~lL~~i~~~~~~~~~l~~Ll~~ 392 (475)
..-|++.+++.+-.+.+-.++.++++|+.. .+++..+|+++ |+.|- ++|.||+-..+++.+..+...-.+.
T Consensus 166 aGHfvKMVHNGIEY~~MQ~iaE~y~~lk~~-----~~~~~~ei~~vF~~wn~g~-l~SyLieIT~~il~~kd~~~g~~lv 239 (459)
T PRK09287 166 AGHYVKMVHNGIEYGDMQLIAEAYDLLKDG-----LGLSAEEIADVFAEWNKGE-LNSYLIEITADILRQKDEETGKPLV 239 (459)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----CCCCHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHHHCCCCCCCCH
T ss_conf 522889987015578899999999999874-----1899899999999984686-2269999999999851777798352
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH-HHHH
Q ss_conf 899999995247699999999983998479999999-9986
Q gi|254780716|r 393 PSISEKVKKTIPSLRRIVVTCTENGYPVPSLSAALS-YFDT 432 (475)
Q Consensus 393 ~~~~~~i~~~~~~lr~vv~~~i~~gip~P~lsssL~-y~~~ 432 (475)
+.|.+....+.++ ||++..|++.|+|+|++.+|+. .+.+
T Consensus 240 d~I~D~a~qkGTG-~Wt~~~al~lgvp~p~I~~Av~aR~~S 279 (459)
T PRK09287 240 DVILDKAGQKGTG-KWTSQSALDLGVPLTLITEAVFARYLS 279 (459)
T ss_pred HHHCCCCCCCCCH-HHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 3312544578716-879999998099928999999999985
No 72
>pfam02826 2-Hacid_dh_C D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain. This domain is inserted into the catalytic domain, the large dehydrogenase and D-lactate dehydrogenase families in SCOP. N-terminal portion of which is represented by family pfam00389.
Probab=98.55 E-value=7.2e-07 Score=70.20 Aligned_cols=115 Identities=17% Similarity=0.259 Sum_probs=92.0
Q ss_pred CCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 88056981571116889999978985999739989999999712211278403289899986057788999976990699
Q gi|254780716|r 3 QADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 3 k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
..+||+||+|+.|+.+|+.+..-|.+|.+||+++.... .. ......+++++.... ++|.+++|-.+.+
T Consensus 36 gk~vgIiG~G~IG~~va~~l~~fg~~V~~~d~~~~~~~--~~-------~~~~~~~l~~ll~~s---Dii~~~~plt~~T 103 (176)
T pfam02826 36 GKTVGIIGLGRIGRAVARRLKAFGMKVIAYDRYPKAEA--EA-------LGARYVSLDELLAES---DVVSLHLPLTPET 103 (176)
T ss_pred CCEEEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCHH--HH-------CCEEECCHHHHHHHC---CEEEECCCCCCCC
T ss_conf 99999989699999999999983981254379876102--31-------571666899998629---9887547674202
Q ss_pred HHHH-HHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCC
Q ss_conf 9999-9997207899899967986578999999999847994306754
Q gi|254780716|r 83 DQLI-DKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGV 129 (475)
Q Consensus 83 ~~vi-~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pV 129 (475)
...+ .+.+..++++.++|.+|-...-|...+.+.+++..+.....=|
T Consensus 104 ~~li~~~~l~~mk~~a~lIN~sRG~ivde~aL~~aL~~~~i~~a~lDV 151 (176)
T pfam02826 104 RHLINAERLALMKPGAILINTARGGLVDEDALIAALKSGRIAGAALDV 151 (176)
T ss_pred CCCCCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEC
T ss_conf 463469999851899889980675512899999999809915899846
No 73
>PTZ00142 6-phosphogluconate dehydrogenase; Provisional
Probab=98.53 E-value=3.9e-07 Score=72.11 Aligned_cols=114 Identities=14% Similarity=0.240 Sum_probs=89.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHC-CCCCCCCCCH
Q ss_conf 278899999999999999999999999996110145667988999985189468537899999998708-8852000798
Q gi|254780716|r 315 CFDSFVKDLENALYASTILSFTQGFWVIGKSSEKYSWSLSLATIARIWRAGCIIRSQILNDIVKSLTED-PSSTNLLNIP 393 (475)
Q Consensus 315 ~~~~~i~~L~~a~~~~~i~syaQGf~ll~~as~~y~w~l~l~~ia~iW~~GCIIrs~lL~~i~~~~~~~-~~l~~Ll~~~ 393 (475)
...-|++.+++.+-.+.+-.++.++++|+...... +.++++|++-|+.| .++|+||+-..+++.+. .+..+-.+.+
T Consensus 180 GaGH~vKMVHNGIEY~~mq~iaE~y~il~~~~~~~--~~~i~~vf~~Wn~g-~l~syLieIt~~il~~~~~~~~~~~~ld 256 (474)
T PTZ00142 180 SSGHYVKMVHNGIEYGDMQLISEAYKLMKHILGMS--NLELSEVFNKWNEG-ILDSYLIEITADILAKKKDELPNNHLVD 256 (474)
T ss_pred CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC--HHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHCCCCCCCCCCHH
T ss_conf 71031001035403899999999999998735999--89999999998376-5347999999999975236878982413
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH-HHHH
Q ss_conf 99999995247699999999983998479999999-9986
Q gi|254780716|r 394 SISEKVKKTIPSLRRIVVTCTENGYPVPSLSAALS-YFDT 432 (475)
Q Consensus 394 ~~~~~i~~~~~~lr~vv~~~i~~gip~P~lsssL~-y~~~ 432 (475)
.+.+....+.++ ||++..|++.|+|+|++.+|+. .+.|
T Consensus 257 ~I~d~a~~kGTG-~Wt~~~al~lgvp~p~i~~av~aR~lS 295 (474)
T PTZ00142 257 KILDIAGQKGTG-KWTAIEALDRGIPVPLIAESVDARCIS 295 (474)
T ss_pred HHCCCCCCCCCH-HHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf 200555688736-989999998099927999999999975
No 74
>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=98.52 E-value=7.5e-05 Score=55.33 Aligned_cols=193 Identities=11% Similarity=0.139 Sum_probs=120.0
Q ss_pred CEEEEEECCHHHHHHHH-HHHHCCCEEEEEECCHHHHHHHHHHCCC------------------CCCCCEECCCHHHHHH
Q ss_conf 80569815711168899-9997898599973998999999971221------------------1278403289899986
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSL-NILDKGFRLAVYNKDFELTDVFIKKISG------------------LSQKVIVTKNLEQMVE 64 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~-nL~~~G~~V~vydr~~~~~~~l~~~~~~------------------~~~~~~~~~s~~e~v~ 64 (475)
.+||+||-|.||..+|. ..++.|++|..+|++++..+.-.+.... ....+++..+.+
T Consensus 310 ~kv~ViGaG~MG~gIA~~~a~~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~v~~g~~~~~~~~~~l~~i~~~~~~~---- 385 (706)
T PRK11154 310 NKVGVLGGGLMGGGIAYVTATKAGLPVRIKDINPQGINHALKYSWDLLDKKVKRRHMTPAERDKQMALISGTTDYR---- 385 (706)
T ss_pred CEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCEEEECCHH----
T ss_conf 6799986473238999999998698799997999999999998899999998618999899999862241004412----
Q ss_pred HCCCCCEEEEECCCHHHHHH-HHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHH--H--CCCCEECC-CCCCCCCCCCC
Q ss_conf 05778899997699069999-9999972078998999679865789999999998--4--79943067-54676000356
Q gi|254780716|r 65 AVCKPRKILMMVTDGDPVDQ-LIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLS--E--KGIYFIGI-GVSGGVKGARS 138 (475)
Q Consensus 65 ~l~~pr~Iil~vp~g~~v~~-vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~--~--kgi~fid~-pVSGG~~gA~~ 138 (475)
.+...+.||-.|+..-.+.. |+.++-..+.++.|+.--+.+-+-+. +++.++ + -|.||.-. ++.--++
T Consensus 386 ~~~~~DlVIEAv~E~~~~K~~v~~~le~~~~~~aIlAtNTSsl~i~~--la~~~~rP~r~iG~HFfnP~~~m~LVE---- 459 (706)
T PRK11154 386 GFKHADLVIEAVFEDLALKQQMVADVEQNCAEHTIFASNTSSLPIGQ--IAAAAARPEQVIGLHYFSPVEKMPLVE---- 459 (706)
T ss_pred HHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHH--HHHHCCCCCEEEEEEECCCCCCCCEEE----
T ss_conf 31568879997145288899999999964798858950676776899--998647841045544257744264279----
Q ss_pred CCEEEEE--CCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf 8437884--54899988899999875015678618985698746789887767878889998999999996428997899
Q gi|254780716|r 139 GASLMVG--GNEKAYNRVENILLSISAKYQNSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKNPLEI 216 (475)
Q Consensus 139 G~slMvG--G~~~~~~~~~piL~~iaak~~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~~i 216 (475)
+..| -++++.+.+..+.+.+... ...+++ ..|-. -|=| .+..+.|+..++..+ .+.++|
T Consensus 460 ---Vi~g~~Ts~et~~~~~~~~~~lgK~------pv~v~d-~pGFi----~NRi---l~~~~~ea~~l~~eG--~~~~~I 520 (706)
T PRK11154 460 ---VIPHAKTSAETIATTVALAKKQGKT------PIVVKD-GAGFY----VNRI---LAPYMNEAARLLLEG--EPIEHI 520 (706)
T ss_pred ---EECCCCCCHHHHHHHHHHHHHCCCE------EEEECC-CCCCH----HHHH---HHHHHHHHHHHHHCC--CCHHHH
T ss_conf ---9437898389999999999975987------899632-37417----9999---999999999999769--999999
Q ss_pred HHHHHHCCC
Q ss_conf 999986068
Q gi|254780716|r 217 SHLFSKWDT 225 (475)
Q Consensus 217 ~~vf~~w~~ 225 (475)
-..+..|.-
T Consensus 521 D~a~~~~G~ 529 (706)
T PRK11154 521 DAALVKFGF 529 (706)
T ss_pred HHHHHHCCC
T ss_conf 999997599
No 75
>PRK06436 glycerate dehydrogenase; Provisional
Probab=98.52 E-value=3.4e-06 Score=65.17 Aligned_cols=109 Identities=15% Similarity=0.240 Sum_probs=89.5
Q ss_pred CCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 88056981571116889999978985999739989999999712211278403289899986057788999976990699
Q gi|254780716|r 3 QADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 3 k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
-+++|+||+|+.|+.+|+.+..-|.+|.+|||+... +. ....+.+++|+... .++|.+.+|-.+.+
T Consensus 122 gktvGIiG~G~IG~~vA~~~~afg~~V~~~~r~~~~------~~-----~~~~~~~~~ell~~---sDivslh~Plt~~T 187 (303)
T PRK06436 122 NKSLGILGYGGIGRRVALLAKAFGMNIYAYTRSYVN------DG-----ISSIYMEPEDIMKK---SDFVLISLPLTDET 187 (303)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCC------CC-----CCEEECCHHHHHHH---CCEEEEECCCCHHH
T ss_conf 888999897656999999999779889998985322------45-----74552689999975---99999925786556
Q ss_pred HHHHH-HHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEE
Q ss_conf 99999-99720789989996798657899999999984799430
Q gi|254780716|r 83 DQLID-KLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFI 125 (475)
Q Consensus 83 ~~vi~-~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fi 125 (475)
...++ +.+..+++|.++|.++-...-|...+.+.|++..+...
T Consensus 188 ~~lI~~~~l~~MK~~a~lIN~aRG~iVde~aL~~aL~~g~i~ga 231 (303)
T PRK06436 188 RGMINSKMLSLFRKGLAIINVARADVVDKNDMLNFLRNHNDKYY 231 (303)
T ss_pred HHHHHHHHHHHCCCCCEEEEECCCCEECHHHHHHHHHHCCCEEE
T ss_conf 77768999985699978999278654689999999981996599
No 76
>pfam10727 Rossmann-like Rossmann-like domain. This family of proteins contain a Rossmann-like domain.
Probab=98.51 E-value=3.1e-06 Score=65.51 Aligned_cols=96 Identities=14% Similarity=0.198 Sum_probs=77.1
Q ss_pred EEEECCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHH
Q ss_conf 6981571116889999978985999-739989999999712211278403289899986057788999976990699999
Q gi|254780716|r 7 GIIGLGSMGSNLSLNILDKGFRLAV-YNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQL 85 (475)
Q Consensus 7 GiIGLG~MG~~mA~nL~~~G~~V~v-ydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~v 85 (475)
||||-|++|..++..|.++||.|++ |.|+.+..+.+.+... ..+.++.|++... ++||+++|++ ...++
T Consensus 1 GiIGaGrvG~~L~~al~~aGh~v~gv~srs~~s~~~a~~~~~------~~~~~~~ev~~~a---dlv~itvPDd-~I~~v 70 (111)
T pfam10727 1 GIISAGRVGVALGEALERAGHVVHAISAISDASRERAERRLD------SPVLPIPDVIRRA---ELVVLAVPDA-ELPGL 70 (111)
T ss_pred CCCCCCHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCC------CCCCCHHHHHHHC---CEEEEECCHH-HHHHH
T ss_conf 943765779999999997898289998389889999998669------9767958989767---9999989788-89999
Q ss_pred HHHHHHCCCCCCEEEECCCCCHHHHHH
Q ss_conf 999972078998999679865789999
Q gi|254780716|r 86 IDKLKPLLSPEDILLDGGNSHFCDTQI 112 (475)
Q Consensus 86 i~~l~~~l~~g~iiID~sts~~~~t~~ 112 (475)
.++|.....+|++++-||-.+-.+..+
T Consensus 71 v~~la~~~~~GqiV~HtSGa~g~~vL~ 97 (111)
T pfam10727 71 VEGLAATVRRGQIVAHTSGAHGIGILA 97 (111)
T ss_pred HHHHHHHCCCCCEEEECCCCCHHHHHC
T ss_conf 999983267997999866875077614
No 77
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=98.51 E-value=1.5e-06 Score=67.90 Aligned_cols=115 Identities=13% Similarity=0.159 Sum_probs=92.8
Q ss_pred CCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 88056981571116889999978985999739989999999712211278403289899986057788999976990699
Q gi|254780716|r 3 QADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 3 k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
...+|+||+|+.|+.+|+.+..-|.+|.+||+.+++.. +......+++|+.... ++|.+.+|-.+.+
T Consensus 146 gktvGIiG~G~IG~~va~~~~~fg~~Vi~yD~~~~~~~----------~~~~~~~sleell~~s---DiIslh~Plt~~T 212 (330)
T PRK12480 146 NMTVAIIGTGRIGAATAKIYAGFGATITAYDAYPNKDL----------DFLTYKDSVKEAIKDA---DIISLHVPANKES 212 (330)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCC----------CCCEECCCHHHHHHHC---CEEEECCCCCHHH
T ss_conf 86899967588999999998756998999899864221----------2132327899998759---9999737685331
Q ss_pred HHHHH-HHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCC
Q ss_conf 99999-9972078998999679865789999999998479943067546
Q gi|254780716|r 83 DQLID-KLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVS 130 (475)
Q Consensus 83 ~~vi~-~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVS 130 (475)
...++ +.+..+++|.++|.++-...-|...+.+.|++..|.-.+.=|-
T Consensus 213 ~~lIn~~~l~~MK~~ailINtaRG~iVde~aL~~AL~~g~I~gAgLDV~ 261 (330)
T PRK12480 213 YHLFDKAMFDHVKKGAILVNAARGAVINTPDLIAAVNDGTLLGAAIDTY 261 (330)
T ss_pred HCCHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHCCCEEEEEEECC
T ss_conf 2004899997579997699727863319999999997598458998558
No 78
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=98.47 E-value=3.8e-06 Score=64.89 Aligned_cols=113 Identities=19% Similarity=0.279 Sum_probs=89.8
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 80569815711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
.++|+||+|..|+.+|+++..-|.+|..|||++. .+..++. ....+ ++.|+....+ +|.+.+|..+.+.
T Consensus 147 ktvGIiG~GrIG~avA~r~~~Fgm~v~y~~~~~~--~~~~~~~-----~~~y~-~l~ell~~sD---ii~l~~Plt~~T~ 215 (324)
T COG1052 147 KTLGIIGLGRIGQAVARRLKGFGMKVLYYDRSPN--PEAEKEL-----GARYV-DLDELLAESD---IISLHCPLTPETR 215 (324)
T ss_pred CEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCC--HHHHHHC-----CCEEC-CHHHHHHHCC---EEEEECCCCHHHH
T ss_conf 8889978488999999987217968998668874--5557405-----86041-6899997699---9999779983766
Q ss_pred HHH-HHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECC
Q ss_conf 999-99972078998999679865789999999998479943067
Q gi|254780716|r 84 QLI-DKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGI 127 (475)
Q Consensus 84 ~vi-~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~ 127 (475)
..+ .+.+..+++|.++|.++=-..-|...+.+.+++..+.-.+.
T Consensus 216 hLin~~~l~~mk~ga~lVNtaRG~~VDe~ALi~AL~~g~i~gagl 260 (324)
T COG1052 216 HLINAEELAKMKPGAILVNTARGGLVDEQALIDALKSGKIAGAGL 260 (324)
T ss_pred HHCCHHHHHHCCCCEEEEECCCCCEECHHHHHHHHHCCCCCEEEE
T ss_conf 532999997568976999648742165999999998097422670
No 79
>TIGR03376 glycerol3P_DH glycerol-3-phosphate dehydrogenase (NAD(+)). Members of this protein family are the eukaryotic enzyme, glycerol-3-phosphate dehydrogenase (NAD(+)) (EC 1.1.1.8). Enzymatic activity for 1.1.1.8 is defined as sn-glycerol 3-phosphate + NAD(+) = glycerone phosphate + NADH. Note the very similar reactions of enzymes defined as EC 1.1.1.94 and 1.1.99.5, assigned to families of proteins in the bacteria.
Probab=98.46 E-value=4e-06 Score=64.72 Aligned_cols=148 Identities=15% Similarity=0.237 Sum_probs=91.2
Q ss_pred EEEEEECCHHHHHHHHHHHHCC--------CEEEEEECCHHH-----HHHHHHHC--------CCCCCCCEECCCHHHHH
Q ss_conf 0569815711168899999789--------859997399899-----99999712--------21127840328989998
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKG--------FRLAVYNKDFEL-----TDVFIKKI--------SGLSQKVIVTKNLEQMV 63 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G--------~~V~vydr~~~~-----~~~l~~~~--------~~~~~~~~~~~s~~e~v 63 (475)
+|++||-|.||.++|..|+++| ++|..|-|.++. ++...+.+ -...+++....++++.+
T Consensus 1 KI~ViGaGawGTALA~~La~ng~~~~~~~~~~V~lw~r~~~~~~~~~~~~in~~~~N~~yLp~i~Lp~~i~~t~dl~~~~ 80 (342)
T TIGR03376 1 RVAVVGSGNWGTAIAKIVAENARALPELFEESVRMWVFEEEIEGRNLTEIINTTHENVKYLPGIKLPANLVAVPDLVEAA 80 (342)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHHH
T ss_conf 98998779999999999997488654557863799972322100468999974496867798784898608966899998
Q ss_pred HHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCEEEECCCCCH--HH-HHHHHHHHHH-CCCCEECCCCCCCCC----C
Q ss_conf 60577889999769906999999999720789989996798657--89-9999999984-799430675467600----0
Q gi|254780716|r 64 EAVCKPRKILMMVTDGDPVDQLIDKLKPLLSPEDILLDGGNSHF--CD-TQIRSLQLSE-KGIYFIGIGVSGGVK----G 135 (475)
Q Consensus 64 ~~l~~pr~Iil~vp~g~~v~~vi~~l~~~l~~g~iiID~sts~~--~~-t~~~~~~l~~-kgi~fid~pVSGG~~----g 135 (475)
+. .++|++.+|+ +.+.++++++.++++++.++|.++--.- .+ .....+.+++ .+.. +.|-.||. -
T Consensus 81 ~~---ad~ii~avPs-~~~r~~~~~l~~~l~~~~~ii~~sKGle~~~~~~~~~seii~e~~~~~---~~vLsGPs~A~EV 153 (342)
T TIGR03376 81 KG---ADILVFVIPH-QFLEGICKQLKGHVKPNARAISCIKGLEVSKDGVKLLSDIIEEELGIP---CGVLSGANLANEV 153 (342)
T ss_pred HC---CCEEEEECCH-HHHHHHHHHHHHHCCCCCEEEEEECCEEECCCCCCCHHHHHHHHHCCC---EEEEECCCCHHHH
T ss_conf 36---9889996686-999999999985458887389842344436998311999999985998---6997277638998
Q ss_pred CCCCCE-EEEECC-----HHHHHHHHHHHH
Q ss_conf 356843-788454-----899988899999
Q gi|254780716|r 136 ARSGAS-LMVGGN-----EKAYNRVENILL 159 (475)
Q Consensus 136 A~~G~s-lMvGG~-----~~~~~~~~piL~ 159 (475)
|+.-|+ ..+++. .+.-+.++.+|.
T Consensus 154 a~~~pt~~~vA~~~~~~~~~~a~~i~~lf~ 183 (342)
T TIGR03376 154 AKEKFSETTVGYRDPADFDVDARVLKALFH 183 (342)
T ss_pred HCCCCCCEEEEECCCCCCHHHHHHHHHHHC
T ss_conf 638886438984374124999999999978
No 80
>PRK07574 formate dehydrogenase; Provisional
Probab=98.45 E-value=4.1e-06 Score=64.64 Aligned_cols=151 Identities=13% Similarity=0.113 Sum_probs=106.6
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCH--HHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHH
Q ss_conf 805698157111688999997898599973998--999999971221127840328989998605778899997699069
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDF--ELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDP 81 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~--~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~ 81 (475)
+++|+||+|+.|+.+|+++..-|.+|..||+.+ +..+. + .++..+.+++|+...++ +|-+.+|-.+.
T Consensus 193 KTlGIVG~GrIG~~VArra~aFgm~Vl~yDp~~l~~~~e~---~-----lg~~~~~sldeLl~~sD---vVslh~PLt~e 261 (385)
T PRK07574 193 MTVGTVGAGRIGLAVLRRLKPFDVTLHYTDRHRLPAEVEQ---E-----LGLTYHPDVDSLVSVCD---VVTIHCPLHPE 261 (385)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHH---H-----CCCCCCCCHHHHHHHCC---EEEECCCCCHH
T ss_conf 9899989788999999999977998998588669889999---7-----19865689999986289---69986679857
Q ss_pred HHHHHH-HHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCC-----CCCC-EEE----EECCHHH
Q ss_conf 999999-9972078998999679865789999999998479943067546760003-----5684-378----8454899
Q gi|254780716|r 82 VDQLID-KLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGVKGA-----RSGA-SLM----VGGNEKA 150 (475)
Q Consensus 82 v~~vi~-~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~~gA-----~~G~-slM----vGG~~~~ 150 (475)
+...++ +.+..+++|.++|+++-...-|...+.+.|++..+.-.+.-|--.+... ++=+ .+| .|-..++
T Consensus 262 T~~Lin~~~l~~MK~ga~LVNtARG~iVDe~AL~~AL~sG~i~gaglDV~~~EP~p~dhPl~~lpNv~lTPHiaG~t~~A 341 (385)
T PRK07574 262 TEHLFDKDVLSRMKRGSYLVNTARGKIVDRDAVVEALESGHLAGYAGDVWFPQPAPADHPWRTMPRNAMTPHISGTTLSA 341 (385)
T ss_pred HHHHCCHHHHHCCCCCCEEEECCCCHHCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHCCCCCEECCCCCCCCHHH
T ss_conf 74010299994389981899888611019999999997298049996789988998998022299616888545486999
Q ss_pred HHH----HHHHHHHHHCCC
Q ss_conf 988----899999875015
Q gi|254780716|r 151 YNR----VENILLSISAKY 165 (475)
Q Consensus 151 ~~~----~~piL~~iaak~ 165 (475)
-.+ ++.+|+.+-..-
T Consensus 342 q~R~a~g~~~~l~~~~~g~ 360 (385)
T PRK07574 342 QARYAAGTREILECFFEGR 360 (385)
T ss_pred HHHHHHHHHHHHHHHHCCC
T ss_conf 9999998999999996599
No 81
>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=98.42 E-value=6.1e-06 Score=63.37 Aligned_cols=107 Identities=20% Similarity=0.342 Sum_probs=89.3
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 80569815711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
.++|+||+|+.|+.+|.....-|.+|.+||+.+.. . ..+...+.+++|+....+ +|-+-+|-.+.+.
T Consensus 152 KtlGIIG~G~IG~~VA~~a~~fGm~Vi~yD~~~~~-----~-----~~~~~~~~sl~ell~~sD---~IslH~Plt~~T~ 218 (409)
T PRK11790 152 KTLGIVGYGHIGTQLSVLAESLGMRVIFYDIEDKL-----P-----LGNATQVGSLEELLAQSD---VVSLHVPETPSTK 218 (409)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCHHHC-----C-----CCCCEECCCHHHHHHHCC---EEEECCCCCHHHH
T ss_conf 78986367547699999998769989997860212-----5-----668467488999987599---9998267984663
Q ss_pred HHHH-HHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 9999-997207899899967986578999999999847994
Q gi|254780716|r 84 QLID-KLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIY 123 (475)
Q Consensus 84 ~vi~-~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~ 123 (475)
..++ +.+..+++|.++|.++-...-|...+.+.|++..+.
T Consensus 219 ~lIn~~~l~~MK~ga~LIN~ARG~iVDe~AL~~AL~~g~I~ 259 (409)
T PRK11790 219 NMIGAEELALMKPGAILINASRGTVVDIDALADALKSGHLA 259 (409)
T ss_pred CCCCHHHHHHCCCCCEEEECCCCHHCCHHHHHHHHHCCCCC
T ss_conf 10439999726999899986885103999999999739930
No 82
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=98.42 E-value=0.00012 Score=53.69 Aligned_cols=176 Identities=15% Similarity=0.202 Sum_probs=115.5
Q ss_pred EEEEE-ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 05698-15711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 5 DIGII-GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 5 ~IGiI-GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
+|.+| |-|.||.=+++-|...||.|.+.|+.. ..+.+++. +.+++|+++||= ..+.
T Consensus 100 ~i~IIGG~G~mG~~F~~~f~~sGy~V~ild~~d-------------------w~~~~~~~---~~advViVsVPI-~~T~ 156 (374)
T PRK11199 100 PVVIVGGKGQLGRLFAKMLTLSGYQVRILEKDD-------------------WDRADDIL---ADAGMVIVSVPI-HLTE 156 (374)
T ss_pred EEEEEECCCCHHHHHHHHHHHCCCEEEEECCCC-------------------CCCHHHHH---HCCCEEEEEECH-HHHH
T ss_conf 179980798277999999996798799616444-------------------53489887---179989998145-8899
Q ss_pred HHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECC-CCCCCCCCCCCCCE-EE-EECCHHHHHHHHHHHHH
Q ss_conf 99999972078998999679865789999999998479943067-54676000356843-78-84548999888999998
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGI-GVSGGVKGARSGAS-LM-VGGNEKAYNRVENILLS 160 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~-pVSGG~~gA~~G~s-lM-vGG~~~~~~~~~piL~~ 160 (475)
+|+.++ |.+.++.++.|.+..--.-. .+-++......++. |+-|-..+...|.. +. .|...+.|..+.+.|+.
T Consensus 157 ~VI~~l-~~l~~~~lL~DiTSvK~~Pl---~aMl~~h~gpV~GlHPMFGP~v~sl~~QvVV~c~gr~~e~~~wl~~~~~~ 232 (374)
T PRK11199 157 EVIEKL-PPLPEDCILVDLTSVKNGPL---QAMLAAHSGPVLGLHPMFGPDVGSLAKQVVVVCDGRQPEAYQWLLEQIQI 232 (374)
T ss_pred HHHHHC-CCCCCCCEEEECHHCCHHHH---HHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHH
T ss_conf 999857-78999868986100427899---99998568985022778799964447876998899983778999999998
Q ss_pred HHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Q ss_conf 7501567861898569874678988776787888999899999999642899789999
Q gi|254780716|r 161 ISAKYQNSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKNPLEISH 218 (475)
Q Consensus 161 iaak~~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~~i~~ 218 (475)
.+++ +..+-+.-.-..+-.| -|.-+-. .++=+..+.+ .+.+.+++.+
T Consensus 233 ~Ga~------l~~~~~~eHD~~Ma~V-QgL~HF~--~~~~g~~L~~--~~~dl~~ll~ 279 (374)
T PRK11199 233 WGAR------LHRISAVEHDQAMAFI-QALRHFS--TFAYGLHLAK--ENVDLEQLLA 279 (374)
T ss_pred HCCE------EEECCHHHHHHHHHHH-HHHHHHH--HHHHHHHHHH--CCCCHHHHHH
T ss_conf 4878------9986888888997999-9999999--9999999986--4999899987
No 83
>pfam01488 Shikimate_DH Shikimate / quinate 5-dehydrogenase. This family contains both shikimate and quinate dehydrogenases. Shikimate 5-dehydrogenase catalyses the conversion of shikimate to 5-dehydroshikimate. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites 3-dehydroquinate and dehydroshikimate.
Probab=98.40 E-value=2.2e-06 Score=66.67 Aligned_cols=96 Identities=15% Similarity=0.281 Sum_probs=70.1
Q ss_pred CCEEEEEECCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHH
Q ss_conf 8805698157111688999997898-599973998999999971221127840328989998605778899997699069
Q gi|254780716|r 3 QADIGIIGLGSMGSNLSLNILDKGF-RLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDP 81 (475)
Q Consensus 3 k~~IGiIGLG~MG~~mA~nL~~~G~-~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~ 81 (475)
..++-+||.|.||..++.+|.+.|. +|+++|||.++++++.++.....-.+. +.+++-+.+...++|+.+.+++.+
T Consensus 12 ~~~vlVIGaG~~~~~~~~~L~~~g~~~i~v~nRt~~ka~~la~~~~~~~~~~~---~~~~l~~~l~~~DivI~aT~s~~~ 88 (134)
T pfam01488 12 GKKVLLIGAGEMARLAAKHLLSKGAKKITIANRTLEKAKELAEEFGGEEVEAL---PLDELEELLAEADIVISATSAPTP 88 (134)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCEEEE---ECHHHHHHHHHCCEEEEECCCCCC
T ss_conf 89899999609999999999975998899954757899999998499725898---513544136319999992599973
Q ss_pred HHHHHHHHHHCCCCCCEEEECC
Q ss_conf 9999999972078998999679
Q gi|254780716|r 82 VDQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 82 v~~vi~~l~~~l~~g~iiID~s 103 (475)
+-. .+.+....+..++||.+
T Consensus 89 ii~--~~~~~~~~~~~~iiDLa 108 (134)
T pfam01488 89 IIT--KEMVEEALKGLLFVDIA 108 (134)
T ss_pred EEC--HHHHHHCCCCEEEEEEC
T ss_conf 648--99997443985999834
No 84
>pfam01408 GFO_IDH_MocA Oxidoreductase family, NAD-binding Rossmann fold. This family of enzymes utilize NADP or NAD. This family is called the GFO/IDH/MOCA family in swiss-prot.
Probab=98.39 E-value=2.8e-05 Score=58.51 Aligned_cols=111 Identities=15% Similarity=0.241 Sum_probs=85.9
Q ss_pred EEEEEECCHHHHHHHHHHHHC--CCEEE-EEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHH
Q ss_conf 056981571116889999978--98599-973998999999971221127840328989998605778899997699069
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDK--GFRLA-VYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDP 81 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~--G~~V~-vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~ 81 (475)
+||+||+|.||...++.+.+. ++++. ++|+++++.+.+.++. ++..+.+.+++.+. ++++.|+++.|+..+
T Consensus 2 ki~iiG~G~~g~~~~~~~~~~~~~~~i~ai~d~~~~~~~~~~~~~-----~~~~~~~~~~~l~~-~~iD~v~I~tp~~~H 75 (120)
T pfam01408 2 RVGIVGAGKIGRRHLRALNESQDGAELVGVLDPDPARAEAVAESF-----GVPAYSDLEELLAD-PDVDAVSVATPPGLH 75 (120)
T ss_pred EEEEEECHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHH-----CCCEECCHHHHHHC-CCCCEEEECCCHHHH
T ss_conf 899990779999999999855999789999829999999999983-----99678869999737-788989990874618
Q ss_pred HHHHHHHHHHCCCCCCEEEEC-CCCCHHHHHHHHHHHHHCCCCE
Q ss_conf 999999997207899899967-9865789999999998479943
Q gi|254780716|r 82 VDQLIDKLKPLLSPEDILLDG-GNSHFCDTQIRSLQLSEKGIYF 124 (475)
Q Consensus 82 v~~vi~~l~~~l~~g~iiID~-sts~~~~t~~~~~~l~~kgi~f 124 (475)
.+-+..-+... -.++++= -..+.++..+..+.++++|..+
T Consensus 76 ~~~~~~~l~~g---~~v~~EKP~~~~~~e~~~l~~~a~~~~~~~ 116 (120)
T pfam01408 76 FELALAALEAG---KHVLVEKPLATTVEEAKELVELAEKKGVRL 116 (120)
T ss_pred HHHHHHHHHHC---CEEEEECCCCCCHHHHHHHHHHHHHCCCEE
T ss_conf 99999999819---989996898199999999999999829969
No 85
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=98.38 E-value=9.7e-06 Score=61.85 Aligned_cols=108 Identities=17% Similarity=0.254 Sum_probs=87.4
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEEC--CHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHH
Q ss_conf 8056981571116889999978985999739--98999999971221127840328989998605778899997699069
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNK--DFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDP 81 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr--~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~ 81 (475)
.++|+||+|+.|+.+|+.+..-|.+|.+||+ ++++.+++ ++.. .+++|+. ++.++|-+-+|-.+.
T Consensus 139 ktlGIiG~G~IG~~vA~~~~~fgm~Vi~yDP~~~~~~~~~~---------gv~~-~~l~ell---~~sD~IslH~Plt~e 205 (524)
T PRK13581 139 KTLGVIGLGRIGSEVAKRAKAFGMKVIAYDPYISPERAAQL---------GVEL-VELDELL---ARADFITLHTPLTPE 205 (524)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHC---------CCEE-EEHHHHH---HHCCEEEECCCCCHH
T ss_conf 88999776757899999998549747887776446679871---------9668-6089973---108899993678615
Q ss_pred HHHHHH-HHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCE
Q ss_conf 999999-9972078998999679865789999999998479943
Q gi|254780716|r 82 VDQLID-KLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYF 124 (475)
Q Consensus 82 v~~vi~-~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~f 124 (475)
+...++ +.+..+++|.++|.++-...-|...+.+.|++..+..
T Consensus 206 T~~li~~~~~~~MK~ga~lIN~aRG~iVde~aL~~AL~~g~i~g 249 (524)
T PRK13581 206 TRNLIGAEELAKMKPGVRIINCARGGIIDEAALAEALKSGKVAG 249 (524)
T ss_pred HHHHCCHHHHHHCCCCCEEEECCCCCEECHHHHHHHHHCCCCCE
T ss_conf 54430799996068998699748876058999999996499765
No 86
>PRK08605 D-lactate dehydrogenase; Validated
Probab=98.36 E-value=1e-05 Score=61.71 Aligned_cols=116 Identities=14% Similarity=0.149 Sum_probs=88.9
Q ss_pred CCEEEEEECCHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHH
Q ss_conf 8805698157111688999997-898599973998999999971221127840328989998605778899997699069
Q gi|254780716|r 3 QADIGIIGLGSMGSNLSLNILD-KGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDP 81 (475)
Q Consensus 3 k~~IGiIGLG~MG~~mA~nL~~-~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~ 81 (475)
..++|+||+|+.|+.+|+.+++ -|.+|.+||+.++.. .. . .+....+++|+.... ++|.+.+|..+.
T Consensus 146 ~ktvGIiG~G~IG~~vak~~a~~fgm~vi~yd~~~~~~--~~-~------~~~~~~~l~ell~~s---DiIslh~Plt~~ 213 (332)
T PRK08605 146 DLKVAVIGTGRIGLAVAKIFAKGYGCDVVAYDPFPNAK--AA-T------YVDYKDTIEEAVEGA---DIVTLHMPATKY 213 (332)
T ss_pred CCEEEEEEEEHHHHHHHHHHHHHCCCEEEEECCCCCHH--HH-H------CCEECCCHHHHHHHC---CEEEEECCCCHH
T ss_conf 77899997436889999999875698267877887655--66-2------070216899998649---999993368835
Q ss_pred HHHHHH-HHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCC
Q ss_conf 999999-9972078998999679865789999999998479943067546
Q gi|254780716|r 82 VDQLID-KLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVS 130 (475)
Q Consensus 82 v~~vi~-~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVS 130 (475)
+...++ +.+..++++.++|.++-...-|...+.+.|++..+.-.+.-|-
T Consensus 214 T~~lI~~~~l~~MK~~a~lINtaRG~iVde~aL~~AL~~g~I~gAalDVf 263 (332)
T PRK08605 214 NTYLFNADLFKHFKKGAVFVNCARGSLVDTKALLDALDNGLIKGAALDTY 263 (332)
T ss_pred HHHHCCHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCEEEEEEECC
T ss_conf 50121899997224796899906865338999999998198128998537
No 87
>pfam00393 6PGD 6-phosphogluconate dehydrogenase, C-terminal domain. This family represents the C-terminal all-alpha domain of 6-phosphogluconate dehydrogenase. The domain contains two structural repeats of 5 helices each.
Probab=98.35 E-value=2.2e-06 Score=66.57 Aligned_cols=113 Identities=8% Similarity=0.137 Sum_probs=79.9
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---CCCCHHHHHHHHHHCCCCC-CCHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 6987467898877678788899989999999964---2899789999998606884-43079999999997405679995
Q gi|254780716|r 175 GPDGSGHFVKMIHNGIEYANMQLIADIYGILRDS---LNKNPLEISHLFSKWDTGK-LSSYLIKITAEILSSSDTITGMP 250 (475)
Q Consensus 175 G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~---~~~~~~~i~~vf~~w~~~~-~~syLl~i~~~il~~k~~~~g~~ 250 (475)
.+..-..+++-+.+++-.+.+-..+.+|++++.+ .+. +..+++|..-|..|- ++|.||+-..+++.+..+...=.
T Consensus 133 ~~~~~~~~i~~L~~Aly~s~i~syaQGf~li~~as~~~~W-~lnl~~Ia~iWr~GCIIRs~lL~~i~~a~~~~~~l~nLl 211 (290)
T pfam00393 133 DKGDKAEFIEDVRQALYASKIVSYAQGFMLLRAASKEYGW-NLNLGEIARIWRGGCIIRAQFLDKIKDAYEKNPDLPNLL 211 (290)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCCC
T ss_conf 6543789999999999999999999999999999998277-888899999855886654998999999985499731201
Q ss_pred CHHHCCCCCCCC-CHHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf 200102333658-71677898877517888514677788
Q gi|254780716|r 251 IIDVICDKASQK-GTGIRSIIEGHKLSSSMTITETAIFA 288 (475)
Q Consensus 251 lid~i~d~~~~k-gTg~Wt~~~a~~lgvp~p~i~~av~a 288 (475)
+.+.+.+....+ -.-+-.+..|++.|+|+|++.+|+.-
T Consensus 212 ~~~~f~~~l~~~~~~lR~vV~~ai~~giP~PalSsaL~Y 250 (290)
T pfam00393 212 LDPYFKKEIKEYQQSWRRVVAIAVEAGIPVPAFSSALSY 250 (290)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 359999999999999999999999859983889999999
No 88
>PRK13243 glyoxylate reductase; Reviewed
Probab=98.35 E-value=5.4e-06 Score=63.72 Aligned_cols=112 Identities=21% Similarity=0.307 Sum_probs=89.3
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 80569815711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
.++|+||+|+.|+.+|+.+..-|.+|.+||+....- ..++. ++ ...+++++.. ..++|.+.+|-.+.+.
T Consensus 151 ktlGIiG~G~IG~~vak~~~~fgm~V~~~d~~~~~~--~~~~~-----~~-~~~~l~ell~---~sDiIslh~Plt~eT~ 219 (333)
T PRK13243 151 KTIGIVGFGRIGQAIARRAKGFGMRILYYSRTRKPE--VEKEL-----GA-EYRPLEDLLR---ESDFVVLAVPLTKETY 219 (333)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHH--HHHHC-----CC-EEECHHHHHH---HCCEEEECCCCCCCCC
T ss_conf 899997925668999999997699999989989866--78760-----96-8811999742---1652664255860134
Q ss_pred HHHH-HHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEEC
Q ss_conf 9999-997207899899967986578999999999847994306
Q gi|254780716|r 84 QLID-KLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIG 126 (475)
Q Consensus 84 ~vi~-~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid 126 (475)
..++ +.+..+++|.++|.++-...-|...+.+.|++..+...+
T Consensus 220 ~li~~~~~~~MK~~a~lIN~aRG~iVde~aL~~aL~~g~i~gA~ 263 (333)
T PRK13243 220 HMINEERLKLMKKTAILVNIARGKVVDTKALVKALKEGWIAGAG 263 (333)
T ss_pred CCCCHHHHHHCCCCEEEEECCCCHHCCHHHHHHHHHHCCCEEEE
T ss_conf 61369999717998199985884003999999999809913899
No 89
>PRK06932 glycerate dehydrogenase; Provisional
Probab=98.33 E-value=1.6e-05 Score=60.21 Aligned_cols=112 Identities=16% Similarity=0.228 Sum_probs=88.1
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 80569815711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
.++|+||+|+.|+.+|+.+..-|.+|..+++.... .. ...+.+++|+.. ..++|.+.+|-.+.+.
T Consensus 148 ktvGIiG~G~IG~~va~~~~~fGm~V~~~~~~~~~--~~----------~~~~~~l~ell~---~sDiIslh~Plt~eT~ 212 (314)
T PRK06932 148 STLGVFGKGCLGSEVGRLATALGMKVLYAEHKGAT--EC----------REGYTPFEEVLK---QADIVTLHCPLTESTQ 212 (314)
T ss_pred CEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCH--HH----------CCCCCCHHHHHH---CCCEEEEEECCCCCCC
T ss_conf 68899763528889999985289889997876612--32----------346575999962---3583689511301023
Q ss_pred HHHH-HHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCC
Q ss_conf 9999-9972078998999679865789999999998479943067546
Q gi|254780716|r 84 QLID-KLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVS 130 (475)
Q Consensus 84 ~vi~-~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVS 130 (475)
..++ +.+..++++.++|.++-...-|...+.+.+++..+...+.=|-
T Consensus 213 ~li~~~~l~~MK~~a~lIN~aRG~iVde~aL~~AL~~g~I~gA~lDV~ 260 (314)
T PRK06932 213 NLINAETLALMKPTAFLINTGRGPLVDEQALVDALETGHIAGAALDVL 260 (314)
T ss_pred CHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCC
T ss_conf 366699973578871999826755449999999998299028997279
No 90
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=98.32 E-value=7.8e-06 Score=62.54 Aligned_cols=105 Identities=22% Similarity=0.304 Sum_probs=84.3
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 80569815711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
.++|+||+|+.|+.+|+.+..-|.+|.+||+..... ... ....+++++.... ++|.+.+|-.+.+.
T Consensus 146 ktlGIvG~G~IG~~va~~l~~fGm~V~~~d~~~~~~----------~~~-~~~~~l~ell~~s---Divslh~Plt~~T~ 211 (311)
T PRK08410 146 KKWGIIGLGTIGKRVAKIAQAFGAEVVYYSTSGKNK----------NSE-YERLSLEELLKTS---DIISIHAPLNEKTK 211 (311)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCC----------CCC-CEECCHHHHHHHC---CEEEEECCCCCCCC
T ss_conf 889998447489999999997699899989843124----------578-1357899998737---80145335762223
Q ss_pred HHHH-HHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCC
Q ss_conf 9999-99720789989996798657899999999984799
Q gi|254780716|r 84 QLID-KLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGI 122 (475)
Q Consensus 84 ~vi~-~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi 122 (475)
..++ +.+..+++|.++|.++-...-|...+.+.++++-+
T Consensus 212 ~li~~~~l~~Mk~~a~lIN~aRG~iVde~aL~~aL~~~~i 251 (311)
T PRK08410 212 NLINYEELKLLKDGAILINVGRGGIVNEKDLAKALDEKDI 251 (311)
T ss_pred CHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCC
T ss_conf 4012899963045755999257422599999999975995
No 91
>TIGR00745 apbA_panE 2-dehydropantoate 2-reductase; InterPro: IPR003710 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway . Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE . ApbA and PanE are allelic .; GO: 0008677 2-dehydropantoate 2-reductase activity, 0006206 pyrimidine base metabolic process.
Probab=98.30 E-value=0.0002 Score=52.13 Aligned_cols=176 Identities=16% Similarity=0.184 Sum_probs=119.0
Q ss_pred EEEEEECCHHHHHHHHHHHHCC--CEEEEEECCH--HHHHHHHHHC-----CCC------CCCCEECCCHHHHHHHCCCC
Q ss_conf 0569815711168899999789--8599973998--9999999712-----211------27840328989998605778
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKG--FRLAVYNKDF--ELTDVFIKKI-----SGL------SQKVIVTKNLEQMVEAVCKP 69 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G--~~V~vydr~~--~~~~~l~~~~-----~~~------~~~~~~~~s~~e~v~~l~~p 69 (475)
+|+|||.|.||+-++..|.++| ++|+++.|.. +..+.+.++| ... ...+..+.+++++. ..++
T Consensus 1 ~i~i~G~GA~G~l~ga~L~~~g~~~~V~~~~R~~r~~~~~~~~~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 78 (332)
T TIGR00745 1 KIAIIGAGAVGSLYGARLARAGANHDVTLLARGKRPKQLEALNQEGLRIVSLDGEGVFELKIPVSAATDPETLP--PQKA 78 (332)
T ss_pred CEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCEEEECCCCCCEEEECCCEEECCCCCCC--CCCC
T ss_conf 96899517889999999873189951899988721688999985883897625677503304412204753357--8775
Q ss_pred CEEEEECCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHH--C----CCCEECCCCCCCC-CCCCCCC-E
Q ss_conf 89999769906999999999720789989996798657899999999984--7----9943067546760-0035684-3
Q gi|254780716|r 70 RKILMMVTDGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSE--K----GIYFIGIGVSGGV-KGARSGA-S 141 (475)
Q Consensus 70 r~Iil~vp~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~--k----gi~fid~pVSGG~-~gA~~G~-s 141 (475)
|++|+++.+. ++++.+..+.|.+.++.+|+-.-|. ...-.++.+.+.+ . |+.+.++.-++.- .--..|. .
T Consensus 79 D~~~~~~K~~-~~~~~~~~~~~~~~~~~~vl~lqNG-~g~~e~l~~~~~~n~~~~l~G~~~~ga~~~~~g~~~~~~g~G~ 156 (332)
T TIGR00745 79 DLVIITVKAY-QTEEALALLLPLIGPNTVVLLLQNG-LGHEEKLAELLPENRRRVLGGVTTHGAAREEPGLVVHHAGEGA 156 (332)
T ss_pred CEEEEEECCC-CHHHHHHHHHHHCCCCCEEEEEECC-CHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCEEEEEECCCE
T ss_conf 4899970350-0489999998641888279997388-0279999985069977089999988767708840899723633
Q ss_pred EEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 78845489998889999987501567861898569874678988776
Q gi|254780716|r 142 LMVGGNEKAYNRVENILLSISAKYQNSPCCALLGPDGSGHFVKMIHN 188 (475)
Q Consensus 142 lMvGG~~~~~~~~~piL~~iaak~~~~~cv~y~G~~GsGh~vKMVhN 188 (475)
+.+|--... +.++.+.+.+..-. --+.+.++.=...--|.+-|
T Consensus 157 ~~~G~~~~~-~~~~~~a~~l~~ag---~~~~~~~d~~~~~W~Kl~~N 199 (332)
T TIGR00745 157 TKIGDYVGE-EAVEALAELLNEAG---IPAELTEDIQAAIWKKLLVN 199 (332)
T ss_pred EEECCCCCH-HHHHHHHHHHHHCC---CCEEECCHHHHHHHHHHHHH
T ss_conf 884577764-57899999973179---85378302899998878645
No 92
>PRK00257 erythronate-4-phosphate dehydrogenase; Validated
Probab=98.27 E-value=9.1e-06 Score=62.05 Aligned_cols=107 Identities=18% Similarity=0.210 Sum_probs=83.0
Q ss_pred CCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHH-
Q ss_conf 8805698157111688999997898599973998999999971221127840328989998605778899997699069-
Q gi|254780716|r 3 QADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDP- 81 (475)
Q Consensus 3 k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~- 81 (475)
...+|+||+|+.|+.+|+.+..-|++|.+||+..+..+ ....+.+++++...++ +|-+-+|-.+.
T Consensus 116 gktvGIIG~G~IG~~va~~l~afG~~vl~~DP~~~~~~-----------~~~~~~sleell~~sD---iIslHvPLt~~g 181 (379)
T PRK00257 116 ERTYGIVGVGHVGGRLVRVLRGLGWKVLVCDPPRQEAE-----------GDGDFVSLERILEECD---IISLHTPLTKEG 181 (379)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCHHHHHH-----------CCCCEECHHHHHHHCC---EEEEECCCCCCC
T ss_conf 98799977167999999999977998999784576643-----------3860334999987499---999925777788
Q ss_pred ---HHHHH-HHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCC
Q ss_conf ---99999-9997207899899967986578999999999847994
Q gi|254780716|r 82 ---VDQLI-DKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIY 123 (475)
Q Consensus 82 ---v~~vi-~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~ 123 (475)
+...+ ...+..++++.++|.++-...-|...+.+.+++..+.
T Consensus 182 ~~~T~~Li~~~~L~~mk~~aiLINtsRG~VVDe~ALl~aL~~g~~~ 227 (379)
T PRK00257 182 EHPTWHLLDEAFLASLRPGAWLINASRGAVVDNQALREALLSGEDL 227 (379)
T ss_pred CCCCCCCCCHHHHHHCCCCCEEEECCCCHHCCHHHHHHHHHHCCCC
T ss_conf 7532047199999607998099988973001999999999819963
No 93
>KOG0069 consensus
Probab=98.25 E-value=2e-05 Score=59.54 Aligned_cols=110 Identities=15% Similarity=0.212 Sum_probs=88.1
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 80569815711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
+.||++|+|+.|+.+|++|..-|-.+.-++|++...+...+.++. ..+..++.... ++|++++|..+.+.
T Consensus 163 K~vgilG~G~IG~~ia~rL~~Fg~~i~y~~r~~~~~~~~~~~~~~-------~~d~~~~~~~s---D~ivv~~pLt~~T~ 232 (336)
T KOG0069 163 KTVGILGLGRIGKAIAKRLKPFGCVILYHSRTQLPPEEAYEYYAE-------FVDIEELLANS---DVIVVNCPLTKETR 232 (336)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCC-------CCCHHHHHHHC---CEEEEECCCCHHHH
T ss_conf 779996274788999996353266255411357763668874354-------36788887328---87999268977888
Q ss_pred HHHH-HHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 9999-997207899899967986578999999999847994
Q gi|254780716|r 84 QLID-KLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIY 123 (475)
Q Consensus 84 ~vi~-~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~ 123 (475)
.+++ +++..+++|-++|.++-...-|-....+.+++--+.
T Consensus 233 ~liNk~~~~~mk~g~vlVN~aRG~iide~~l~eaL~sG~i~ 273 (336)
T KOG0069 233 HLINKKFIEKMKDGAVLVNTARGAIIDEEALVEALKSGKIA 273 (336)
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCCC
T ss_conf 77609999864797699964642402599999787539853
No 94
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=98.25 E-value=3.9e-05 Score=57.38 Aligned_cols=229 Identities=16% Similarity=0.131 Sum_probs=143.2
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHCCCCC-CCCEECCCHHHHHHHCCCCCEEEEECCC
Q ss_conf 99880569815711168899999789-859997399899999997122112-7840328989998605778899997699
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKG-FRLAVYNKDFELTDVFIKKISGLS-QKVIVTKNLEQMVEAVCKPRKILMMVTD 78 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G-~~V~vydr~~~~~~~l~~~~~~~~-~~~~~~~s~~e~v~~l~~pr~Iil~vp~ 78 (475)
|++ |=+||.|..|+..|.+|+.+| ++|.+=||++++.+++.+...... .-..-+.+.+.+.+.+...++||-++|.
T Consensus 1 m~~--ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~ 78 (389)
T COG1748 1 MMK--ILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPP 78 (389)
T ss_pred CCC--EEEECCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCEEEEECCC
T ss_conf 972--899898666799999998578962999848888999987533466316994256758899987257789992870
Q ss_pred HHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCE-ECCCCCCCCCCC-------C---CCCE--EEEE
Q ss_conf 0699999999972078998999679865789999999998479943-067546760003-------5---6843--7884
Q gi|254780716|r 79 GDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYF-IGIGVSGGVKGA-------R---SGAS--LMVG 145 (475)
Q Consensus 79 g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~f-id~pVSGG~~gA-------~---~G~s--lMvG 145 (475)
.-. ..+++ ..++.|--++|.+...... .++...+++.|+.. ++||+.=|...+ . .-.+ +.+|
T Consensus 79 ~~~-~~i~k---a~i~~gv~yvDts~~~~~~-~~~~~~a~~Agit~v~~~G~dPGi~nv~a~~a~~~~~~~i~si~iy~g 153 (389)
T COG1748 79 FVD-LTILK---ACIKTGVDYVDTSYYEEPP-WKLDEEAKKAGITAVLGCGFDPGITNVLAAYAAKELFDEIESIDIYVG 153 (389)
T ss_pred HHH-HHHHH---HHHHHCCCEEECCCCCCHH-HHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEE
T ss_conf 542-99999---9998599889754677506-565489887490797166768645799999999986165648999982
Q ss_pred C--CHH----HHH---HHHHHHHHHHCCCC------------------------CCCEEEEECCCCHHHHHHHHHH----
Q ss_conf 5--489----998---88999998750156------------------------7861898569874678988776----
Q gi|254780716|r 146 G--NEK----AYN---RVENILLSISAKYQ------------------------NSPCCALLGPDGSGHFVKMIHN---- 188 (475)
Q Consensus 146 G--~~~----~~~---~~~piL~~iaak~~------------------------~~~cv~y~G~~GsGh~vKMVhN---- 188 (475)
| +.. .|. ..+-.|..+...+. +.--+.+..-.|..+++|.++-
T Consensus 154 ~~g~~~~~~l~ya~tws~e~~l~e~~~p~~~~~~Gk~~~v~~~~~~~~~~~~~~G~~~~y~~~~~el~sL~~~i~~~~~~ 233 (389)
T COG1748 154 GLGEHGDNPLGYATTWSPEINLREYTRPARYWENGKWVEVDPLEEREVFEFPVIGYGDVYAFYHDELRSLVKTIPGVVRT 233 (389)
T ss_pred CCCCCCCCCCCCEEEECHHHHHHHHCCCEEEEECCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHCCCCCEE
T ss_conf 58989887765326625788689754755998478799816656323324677873258953782277797757540004
Q ss_pred HHHHHHH-HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 7878889-9989999999964289978999999860688443079999999997405
Q gi|254780716|r 189 GIEYANM-QLIADIYGILRDSLNKNPLEISHLFSKWDTGKLSSYLIKITAEILSSSD 244 (475)
Q Consensus 189 gIey~~m-q~iaE~~~~l~~~~~~~~~~i~~vf~~w~~~~~~syLl~i~~~il~~k~ 244 (475)
..+...= |...|.+..|+. +++-..+-.++. ...--+|.+..+|..+-
T Consensus 234 ~~~~t~r~~g~~~~i~~L~~-lGll~~~~v~~~-------~~i~p~eflk~vl~~~~ 282 (389)
T COG1748 234 RFEMTFRYPGHLEVIKALRD-LGLLSREPVKVQ-------QEIVPLEFLKAVLPDPL 282 (389)
T ss_pred EEEEECCCHHHHHHHHHHHH-CCCCCCCCCCCC-------CCCCHHHHHHHHCCCCC
T ss_conf 67760486409999999987-578865543335-------54464888998634501
No 95
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.24 E-value=1.8e-05 Score=59.97 Aligned_cols=95 Identities=16% Similarity=0.317 Sum_probs=66.7
Q ss_pred CCCEEEEEECCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHH
Q ss_conf 98805698157111688999997898-59997399899999997122112784032898999860577889999769906
Q gi|254780716|r 2 KQADIGIIGLGSMGSNLSLNILDKGF-RLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGD 80 (475)
Q Consensus 2 ~k~~IGiIGLG~MG~~mA~nL~~~G~-~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~ 80 (475)
...+|-+||.|-||.-.+++|.++|. ++.+.|||.++++++.++... .. ...+++-+.+...++|+.+..++.
T Consensus 177 ~~~~vLviGaGem~~l~~~~L~~~g~~~i~v~nRt~~ra~~la~~~g~---~~---~~~~~l~~~l~~~DvvisaT~s~~ 250 (311)
T cd05213 177 KGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGG---NA---VPLDELLELLNEADVVISATGAPH 250 (311)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCC---EE---ECHHHHHHHHHHCCEEEEECCCCC
T ss_conf 116799986879999999999965998259976867899999997498---99---729999999976899999279996
Q ss_pred HHHHHHHHHH-HCCCCCCEEEECC
Q ss_conf 9999999997-2078998999679
Q gi|254780716|r 81 PVDQLIDKLK-PLLSPEDILLDGG 103 (475)
Q Consensus 81 ~v~~vi~~l~-~~l~~g~iiID~s 103 (475)
++... +.+. ..-.+..++||.+
T Consensus 251 ~~~~~-~~~~~~~~~~~~~iiDLa 273 (311)
T cd05213 251 YAKIV-ERAMKKRSGKPRLIVDLA 273 (311)
T ss_pred CHHHH-HHHHHHCCCCCEEEEEEC
T ss_conf 20359-999753479976999917
No 96
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=98.21 E-value=2.5e-05 Score=58.84 Aligned_cols=74 Identities=20% Similarity=0.429 Sum_probs=58.7
Q ss_pred CCEEEEEECCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHH
Q ss_conf 8805698157111688999997898-599973998999999971221127840328989998605778899997699069
Q gi|254780716|r 3 QADIGIIGLGSMGSNLSLNILDKGF-RLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDP 81 (475)
Q Consensus 3 k~~IGiIGLG~MG~~mA~nL~~~G~-~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~ 81 (475)
..+|-+||.|-||.-.+++|.++|. ++++.|||.++++++.++... . +.+.+++.+.+...++||++..++.+
T Consensus 182 ~~~vlviGaGem~~l~~k~L~~~g~~~i~v~nRt~~ra~~la~~~~~---~---~~~~~~l~~~l~~~DvvisaT~s~~~ 255 (429)
T PRK00045 182 GKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGA---E---AIPLEELPEALAEADIVISSTAAPHP 255 (429)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCC---E---EECHHHHHHHHHHCCEEEEECCCCCC
T ss_conf 06599976748999999999855998499975867789999997598---8---97499999999658999994489975
Q ss_pred H
Q ss_conf 9
Q gi|254780716|r 82 V 82 (475)
Q Consensus 82 v 82 (475)
+
T Consensus 256 i 256 (429)
T PRK00045 256 I 256 (429)
T ss_pred C
T ss_conf 0
No 97
>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]
Probab=98.19 E-value=0.00016 Score=52.95 Aligned_cols=114 Identities=17% Similarity=0.207 Sum_probs=85.2
Q ss_pred CCCCEEEEEECC-HHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEEC
Q ss_conf 998805698157-11168899999789---85999739989999999712211278403289899986057788999976
Q gi|254780716|r 1 MKQADIGIIGLG-SMGSNLSLNILDKG---FRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMV 76 (475)
Q Consensus 1 M~k~~IGiIGLG-~MG~~mA~nL~~~G---~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~v 76 (475)
|++..||+||+| .++...+..+...+ .-|.++|+++++.+++.++.... ..+.+++++.+. +.++.|+++.
T Consensus 1 ~~~irvgiiG~G~~~~~~~~~~~~~~~~~~~~vav~d~~~~~a~~~a~~~~~~----~~~~~~~~ll~~-~~iD~V~Iat 75 (342)
T COG0673 1 MKMIRVGIIGAGGIAGKAHLPALAALGGGLELVAVVDRDPERAEAFAEEFGIA----KAYTDLEELLAD-PDIDAVYIAT 75 (342)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHCCCC----CCCCCHHHHHCC-CCCCEEEEEC
T ss_conf 99327999898767888889999738874699999649989999999981997----452999999459-9998899969
Q ss_pred CCHHHHHHHHHHHHHCCCCC-CEEEEC-CCCCHHHHHHHHHHHHHCCCC
Q ss_conf 99069999999997207899-899967-986578999999999847994
Q gi|254780716|r 77 TDGDPVDQLIDKLKPLLSPE-DILLDG-GNSHFCDTQIRSLQLSEKGIY 123 (475)
Q Consensus 77 p~g~~v~~vi~~l~~~l~~g-~iiID~-sts~~~~t~~~~~~l~~kgi~ 123 (475)
|+..+.+-++..|. .| .++++= =+.+..+..++.+.++++|+.
T Consensus 76 p~~~H~~~a~~AL~----aGkhVl~EKPla~t~~ea~~l~~~a~~~g~~ 120 (342)
T COG0673 76 PNALHAELALAALE----AGKHVLCEKPLALTLEEAEELVELARKAGVK 120 (342)
T ss_pred CCHHHHHHHHHHHH----CCCEEEEECCCCCCHHHHHHHHHHHHHCCCE
T ss_conf 80677999999997----7996999289989999999999999975994
No 98
>PRK06487 glycerate dehydrogenase; Provisional
Probab=98.17 E-value=2.3e-05 Score=59.16 Aligned_cols=105 Identities=14% Similarity=0.201 Sum_probs=85.3
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 80569815711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
.+||+||+|..|+.+|+.+..-|.+|.+|++...... . ...+++|+... .++|.+.+|-.+.+.
T Consensus 149 ktvGIiG~G~IG~~va~~~~~fg~~V~~~~~~~~~~~---------~----~~~~l~ell~~---sDivslh~Plt~~T~ 212 (317)
T PRK06487 149 KTLGLLGHGELGGAVARLAEAFGMRVLIGQLPGRPAR---------P----DRLPLDELLPQ---VDALTLHCPLTEHTR 212 (317)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCC---------C----CCCCHHHHHHH---CCEEEEECCCCCCCH
T ss_conf 7899978676899999999748999999928888642---------4----50579999873---885687335761121
Q ss_pred HHHH-HHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCE
Q ss_conf 9999-9972078998999679865789999999998479943
Q gi|254780716|r 84 QLID-KLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYF 124 (475)
Q Consensus 84 ~vi~-~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~f 124 (475)
..++ +.+..++++.++|.++-...-|...+.+.+++..+..
T Consensus 213 ~li~~~~l~~Mk~~a~lIN~aRG~lVde~aL~~AL~~g~i~g 254 (317)
T PRK06487 213 HLIGARELALMKPGALLINTARGGLVDEQALADALRSGHLGG 254 (317)
T ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEE
T ss_conf 157999998538997899706865469999999998499418
No 99
>pfam02558 ApbA Ketopantoate reductase PanE/ApbA. This is a family of 2-dehydropantoate 2-reductases also known as ketopantoate reductases, EC:1.1.1.169. The reaction catalysed by this enzyme is: (R)-pantoate + NADP(+) <= 2-dehydropantoate + NADPH. AbpA catalyses the NADPH reduction of ketopantoic acid to pantoic acid in the alternative pyrimidine biosynthetic (APB) pathway. ApbA and PanE are allelic. ApbA, the ketopantoate reductase enzyme is required for the synthesis of thiamine via the APB biosynthetic pathway.
Probab=98.08 E-value=2.9e-05 Score=58.36 Aligned_cols=99 Identities=17% Similarity=0.262 Sum_probs=72.1
Q ss_pred EEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCC---CCEE-CCCHHHHHHHCCCCCEEEEECCCHHH
Q ss_conf 5698157111688999997898599973998999999971221127---8403-28989998605778899997699069
Q gi|254780716|r 6 IGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQ---KVIV-TKNLEQMVEAVCKPRKILMMVTDGDP 81 (475)
Q Consensus 6 IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~---~~~~-~~s~~e~v~~l~~pr~Iil~vp~g~~ 81 (475)
|.++|.|.||.-+|..|.++|++|..+.|.+ ..+.+.+.+-.... .... .....+.......++.||+++++. +
T Consensus 1 I~IiGaGaiG~~~a~~L~~ag~~V~lv~R~~-~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~D~viv~vKa~-~ 78 (150)
T pfam02558 1 IAILGAGAVGSLYGARLARAGHDVTLIARGR-HLEAIRENGLRITSPGGERTVPPPVATSASEELGPADLVIVAVKAY-Q 78 (150)
T ss_pred CEEECCCHHHHHHHHHHHHCCCEEEEEECCC-HHHHHHHCCEEEEECCCCEEEECCEECCCHHHCCCCCEEEEEECCC-C
T ss_conf 9999668999999999997799289997563-6788774976999479838980741038657658867999972245-8
Q ss_pred HHHHHHHHHHCCCCCCEEEECCCCC
Q ss_conf 9999999972078998999679865
Q gi|254780716|r 82 VDQLIDKLKPLLSPEDILLDGGNSH 106 (475)
Q Consensus 82 v~~vi~~l~~~l~~g~iiID~sts~ 106 (475)
+++.++.+.+.+.++..|+-+-|--
T Consensus 79 ~~~al~~l~~~l~~~t~iv~lqNG~ 103 (150)
T pfam02558 79 TAEALEDLAPLLGPNTVVLLLQNGL 103 (150)
T ss_pred HHHHHHHHHHHCCCCCEEEEEECCC
T ss_conf 8999999886528883899942587
No 100
>pfam07991 IlvN Acetohydroxy acid isomeroreductase, catalytic domain. Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.
Probab=98.02 E-value=9.8e-05 Score=54.45 Aligned_cols=90 Identities=21% Similarity=0.255 Sum_probs=66.1
Q ss_pred CCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHH
Q ss_conf 98805698157111688999997898599973998999999971221127840328989998605778899997699069
Q gi|254780716|r 2 KQADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDP 81 (475)
Q Consensus 2 ~k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~ 81 (475)
+..+|++||-|.-|.+-|+||.+.|.+|.+-.|.-++.-+..++ +.+. ..+++|.+... ++|++.+|+. .
T Consensus 3 k~k~iaViGYGsQG~AhAlNLrDSG~~V~vglr~~s~S~~kA~~-----dGf~-v~~~~eA~~~a---Diim~L~PD~-~ 72 (165)
T pfam07991 3 KGKKIAVIGYGSQGHAHALNLRDSGVNVIVGLRPGSKSWEKAKK-----DGFE-VYTVAEAVKKA---DVVMILLPDE-V 72 (165)
T ss_pred CCCEEEEEEECCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHH-----CCCC-CCCHHHHHHHC---CEEEEECCCH-H
T ss_conf 79989999346164888723053499789997899867999997-----8970-04899998657---8999837977-7
Q ss_pred HHHHH-HHHHHCCCCCCEEEE
Q ss_conf 99999-999720789989996
Q gi|254780716|r 82 VDQLI-DKLKPLLSPEDILLD 101 (475)
Q Consensus 82 v~~vi-~~l~~~l~~g~iiID 101 (475)
-.+++ +.+.|.|++|+++.=
T Consensus 73 q~~iy~~~I~p~lk~G~~L~F 93 (165)
T pfam07991 73 QAEVYEKEIAPNLKEGAALAF 93 (165)
T ss_pred HHHHHHHHHHHHCCCCCEEEE
T ss_conf 899999989865789977997
No 101
>PRK05479 ketol-acid reductoisomerase; Provisional
Probab=98.00 E-value=8.5e-05 Score=54.91 Aligned_cols=181 Identities=17% Similarity=0.190 Sum_probs=102.3
Q ss_pred CCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 88056981571116889999978985999739989999999712211278403289899986057788999976990699
Q gi|254780716|r 3 QADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 3 k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
..+|++||-|+-|.+-|+||.+.|.+|.|--|.-++.-+..++ +++ -..+++|.+... ++|++.+|+. .-
T Consensus 17 ~k~iaViGYGsQG~AhAlNLrDSG~~V~vglr~gs~S~~kA~~-----dGf-~v~~~~eA~~~a---Dii~~L~PD~-~q 86 (336)
T PRK05479 17 GKKVAIIGYGSQGHAHALNLRDSGVDVVVGLREGSKSWKKAEA-----DGF-EVLTVAEAAKWA---DVIMILLPDE-LQ 86 (336)
T ss_pred CCEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHH-----CCC-EECCHHHHHHHC---CEEEEECCHH-HH
T ss_conf 9979997527076898855374499779997999803999998-----799-436799999746---8665428757-78
Q ss_pred HHHH-HHHHHCCCCCCEEEEC--CCCCHHHHHHHHHHHHHCCCC-EECCCCCCCCC-C----CCCC-CEEE-EE--CCHH
Q ss_conf 9999-9997207899899967--986578999999999847994-30675467600-0----3568-4378-84--5489
Q gi|254780716|r 83 DQLI-DKLKPLLSPEDILLDG--GNSHFCDTQIRSLQLSEKGIY-FIGIGVSGGVK-G----ARSG-ASLM-VG--GNEK 149 (475)
Q Consensus 83 ~~vi-~~l~~~l~~g~iiID~--sts~~~~t~~~~~~l~~kgi~-fid~pVSGG~~-g----A~~G-~slM-vG--G~~~ 149 (475)
.+|+ +.+.|+|++|+++.=. =|.+|.. .--.+++. ++=||=+-|.. . .-.| ||+. |- -+-.
T Consensus 87 ~~vy~~~I~p~lk~G~~L~FaHGFnIhy~~------I~pp~~vDVimVAPKgpG~~VR~~y~~G~GvP~liAV~qD~sG~ 160 (336)
T PRK05479 87 AEVYKEEIEPNLKEGAALAFAHGFNIHFGQ------IVPPADVDVIMVAPKGPGHLVRREYVEGGGVPCLIAVHQDASGN 160 (336)
T ss_pred HHHHHHHHHHHCCCCCEEEEECCCHHCCCE------EEECCCCCEEEECCCCCCHHHHHHHHCCCCEEEEEEEEECCCHH
T ss_conf 999999998545899768861443000560------44458976799888999768999986389804899998688735
Q ss_pred HHHHHHHHHHHHHCCCCCCCEEE-----------EECCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHCCCCHH
Q ss_conf 99888999998750156786189-----------856987467898877678-788899989999999964289978
Q gi|254780716|r 150 AYNRVENILLSISAKYQNSPCCA-----------LLGPDGSGHFVKMIHNGI-EYANMQLIADIYGILRDSLNKNPL 214 (475)
Q Consensus 150 ~~~~~~piL~~iaak~~~~~cv~-----------y~G~~GsGh~vKMVhNgI-ey~~mq~iaE~~~~l~~~~~~~~~ 214 (475)
+++.+...-.+++..- ..|. .+|+ -.+ +.|...+|--+|+.|..+ ++.++
T Consensus 161 A~~~alaya~~iG~~r---aGvieTTF~eEtetDLfGE-----------Q~VLcGG~~~Li~agFetLvea-Gy~PE 222 (336)
T PRK05479 161 AKDLALAYAKGIGGTR---AGVIETTFKEETETDLFGE-----------QAVLCGGLTELIKAGFETLVEA-GYQPE 222 (336)
T ss_pred HHHHHHHHHHHCCCCC---CCEEECCHHHHHHHHHHHH-----------HHHHHCHHHHHHHHHHHHHHHC-CCCHH
T ss_conf 9999999998738776---6557425599988762445-----------7886243999999999999984-99889
No 102
>pfam03435 Saccharop_dh Saccharopine dehydrogenase. This family comprised of three structural domains that can not be separated in the linear sequence. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase. The saccharopine dehydrogenase can also function as a saccharopine reductase.
Probab=98.00 E-value=0.00018 Score=52.49 Aligned_cols=123 Identities=15% Similarity=0.192 Sum_probs=82.9
Q ss_pred EEEEECCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHCCCCC--CCCEECCCHHHHHHHCCCCCEEEEECCCHHH
Q ss_conf 5698157111688999997898--59997399899999997122112--7840328989998605778899997699069
Q gi|254780716|r 6 IGIIGLGSMGSNLSLNILDKGF--RLAVYNKDFELTDVFIKKISGLS--QKVIVTKNLEQMVEAVCKPRKILMMVTDGDP 81 (475)
Q Consensus 6 IGiIGLG~MG~~mA~nL~~~G~--~V~vydr~~~~~~~l~~~~~~~~--~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~ 81 (475)
|-+||.|.||+.++..|++++. +|++-||+.++++.+.+...... ....-..+.+++...++..++|+.|+|.-.
T Consensus 1 IlvlGaG~vG~~~~~~L~~~~~~~~i~vad~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~diVv~~~p~~~- 79 (384)
T pfam03435 1 VLIIGAGGVGQGVAPLLARHGDVDEITVADRSLEKAQALAAPKLGLRFIAIAVDADNYEALAALLKEGDLVINLAPPFL- 79 (384)
T ss_pred CEEECCCHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCEEEECCCHHH-
T ss_conf 9898977879999999972899886999989889989877523698538999577899999998712899999984341-
Q ss_pred HHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCC-EECCCCCCCC
Q ss_conf 999999997207899899967986578999999999847994-3067546760
Q gi|254780716|r 82 VDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIY-FIGIGVSGGV 133 (475)
Q Consensus 82 v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~-fid~pVSGG~ 133 (475)
-..+++ ..++.|.-+||.+ ...++..++.++++++|+. .++||.+=|.
T Consensus 80 ~~~i~~---~c~~~g~~yvd~s-~~~~~~~~l~~~a~~ag~~~~~~~G~~PGi 128 (384)
T pfam03435 80 SLTVLK---ACIETGVHYVDTS-YLREAQLALHEKAKEAGVTAVLGCGFDPGL 128 (384)
T ss_pred CHHHHH---HHHHCCCCEEECC-CCHHHHHHHHHHHHHCCCEEEECCCCCCCH
T ss_conf 699999---9997399757534-366889999997765696899678889884
No 103
>PRK13304 L-aspartate dehydrogenase; Reviewed
Probab=97.97 E-value=0.00019 Score=52.28 Aligned_cols=172 Identities=17% Similarity=0.263 Sum_probs=103.1
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHC--CCE-EEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECC
Q ss_conf 9988056981571116889999978--985-9997399899999997122112784032898999860577889999769
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDK--GFR-LAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVT 77 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~--G~~-V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp 77 (475)
|.+ ||+||.|.||+.+|..|.+. +++ +.+|||++++.+++.... ....+.+++++.+ .|++|+=|-+
T Consensus 1 M~r--VgiIG~GaIG~~Va~~l~~g~~~~~L~~V~~r~~~~a~~~a~~~-----~~~~~~~ld~l~~---~~DlVVE~A~ 70 (265)
T PRK13304 1 MLK--IGIVGCGAIANLITKAIDSGRINAELLAFYDRNLEKAENLAEKT-----GAPACLSIDELVK---DVDLVVECAS 70 (265)
T ss_pred CCE--EEEECCCHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHCC-----CCCCCCCHHHHHH---CCCEEEECCC
T ss_conf 949--99986578999999998679986499999789878988776415-----9971279899833---8999998989
Q ss_pred CHHHHHHHHHHHHHCCCCC-CEEEECCCCCHHH---HHHHHHHHHHCCCC-EECCCCCCCCC---CCCCC-C-EE-EEEC
Q ss_conf 9069999999997207899-8999679865789---99999999847994-30675467600---03568-4-37-8845
Q gi|254780716|r 78 DGDPVDQLIDKLKPLLSPE-DILLDGGNSHFCD---TQIRSLQLSEKGIY-FIGIGVSGGVK---GARSG-A-SL-MVGG 146 (475)
Q Consensus 78 ~g~~v~~vi~~l~~~l~~g-~iiID~sts~~~~---t~~~~~~l~~kgi~-fid~pVSGG~~---gA~~G-~-sl-MvGG 146 (475)
. +++.+....++ +.| |+++ +|..-..| -.++.+.+++.|-+ |+-.|=-||-. .|..| . .+ |.+=
T Consensus 71 ~-~av~~~~~~~L---~~G~dlvv-~SvGALaD~~l~~~L~~~A~~~g~~i~ipsGAigGlD~l~aa~~~~l~~V~~~tr 145 (265)
T PRK13304 71 Q-KAVEDTVPKSL---NNGKDVII-MSVGALADKELFLKLYKLAKENGCKIYLPSGAIAGIDGIKAASLGEIESVTLTTR 145 (265)
T ss_pred H-HHHHHHHHHHH---HCCCCEEE-ECHHHHCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEEE
T ss_conf 8-99999999999---75998999-8136855989999999999737977998261344278899986589757999987
Q ss_pred -CHHHHHHHHHHHHHHHCCCCCCCEEEEECCC--CHHHHHHHHHH
Q ss_conf -4899988899999875015678618985698--74678988776
Q gi|254780716|r 147 -NEKAYNRVENILLSISAKYQNSPCCALLGPD--GSGHFVKMIHN 188 (475)
Q Consensus 147 -~~~~~~~~~piL~~iaak~~~~~cv~y~G~~--GsGh~vKMVhN 188 (475)
++..|... |..+.+--....+|-+.|-|+. .+-.|=|=||=
T Consensus 146 K~P~~l~~~-~~~~~~~l~~~~e~~~~F~G~Area~~~fP~NvNV 189 (265)
T PRK13304 146 KPPHGLEGA-LEELGINLEDIKEPKVLFEGTASEAVKKFPQNINV 189 (265)
T ss_pred ECHHHHCCC-HHHHCCCCCCCCCCEEEEECCHHHHHHHCCCHHHH
T ss_conf 486896778-66604673014677799825899999876752789
No 104
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=97.93 E-value=0.00018 Score=52.47 Aligned_cols=72 Identities=21% Similarity=0.416 Sum_probs=55.6
Q ss_pred CCEEEEEECCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHH
Q ss_conf 880569815711168899999789-859997399899999997122112784032898999860577889999769906
Q gi|254780716|r 3 QADIGIIGLGSMGSNLSLNILDKG-FRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGD 80 (475)
Q Consensus 3 k~~IGiIGLG~MG~~mA~nL~~~G-~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~ 80 (475)
..++-|||.|-||.-.|++|..+| ..|++.|||.++++++.++.. .-+..++|+.+.+...++||.+-.++.
T Consensus 178 ~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~------~~~~~l~el~~~l~~~DvVissTsa~~ 250 (414)
T COG0373 178 DKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG------AEAVALEELLEALAEADVVISSTSAPH 250 (414)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHC------CEEECHHHHHHHHHHCCEEEEECCCCC
T ss_conf 6769998651899999999985898779997587899999999838------702218778876520799999069985
No 105
>PRK08818 prephenate dehydrogenase; Provisional
Probab=97.92 E-value=0.00063 Score=48.50 Aligned_cols=144 Identities=13% Similarity=0.210 Sum_probs=98.4
Q ss_pred CCEEEEEECC-HHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHH
Q ss_conf 8805698157-1116889999978-9859997399899999997122112784032898999860577889999769906
Q gi|254780716|r 3 QADIGIIGLG-SMGSNLSLNILDK-GFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGD 80 (475)
Q Consensus 3 k~~IGiIGLG-~MG~~mA~nL~~~-G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~ 80 (475)
.+-|||||.+ --|+=+|+-|.++ +++|.+||....+ ..+++++ +.+.++|++.||- .
T Consensus 4 ~piV~iiG~~~~~G~w~a~flr~~~~~~vig~dp~~~~-----------------s~D~~~l---~~~aDIVIisVPI-~ 62 (373)
T PRK08818 4 QPVVGIVGIAGAYGRWLAQFLRTRMQLEVIGYDPADPG-----------------SLDPATL---LARADVLVFSAPI-R 62 (373)
T ss_pred CCEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCC-----------------CCCHHHH---HHCCCEEEEECCH-H
T ss_conf 86389962663265899999874366178854887756-----------------6698898---6238989997780-3
Q ss_pred HHHHHHHH---HHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECC-CCCCCC-CCCCCCC-EEEE-ECCHHHHHH
Q ss_conf 99999999---972078998999679865789999999998479943067-546760-0035684-3788-454899988
Q gi|254780716|r 81 PVDQLIDK---LKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGI-GVSGGV-KGARSGA-SLMV-GGNEKAYNR 153 (475)
Q Consensus 81 ~v~~vi~~---l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~-pVSGG~-~gA~~G~-slMv-GG~~~~~~~ 153 (475)
++.+|+.+ +.|.++.|.++.|.+..--.-+ +...+...+++.. |+-|.| ....+|. .+++ +.+.....-
T Consensus 63 ~T~~vI~E~~~~Ap~~~~gsLLmDVTSIKe~Pv----~AM~~s~~eVv~~HPMfGpP~sPsL~gqVVIltp~~~~~~~~~ 138 (373)
T PRK08818 63 HTAALIERYVALAGARAAGQLWLDVTSIKQAPV----AAMLASQAEVVGLHPMTAPPKSPTLKGRVMVVCEARLQHWSPW 138 (373)
T ss_pred HHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHH----HHHHHCCCCEECCCCCCCCCCCCCCCCEEEEEECCCCCCCHHH
T ss_conf 238899887741655678856885033406889----9986444422237887789998640441899705765523599
Q ss_pred HHHHHHHHHCCCCCCCEEEEECCC
Q ss_conf 899999875015678618985698
Q gi|254780716|r 154 VENILLSISAKYQNSPCCALLGPD 177 (475)
Q Consensus 154 ~~piL~~iaak~~~~~cv~y~G~~ 177 (475)
++.+++...++ |.++-|.
T Consensus 139 v~kl~e~lgAe------v~~~sPe 156 (373)
T PRK08818 139 VDSLCSALQAE------CVYATPE 156 (373)
T ss_pred HHHHHHHCCCE------EEEECHH
T ss_conf 99999753877------9996888
No 106
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=97.92 E-value=0.00032 Score=50.63 Aligned_cols=246 Identities=19% Similarity=0.159 Sum_probs=124.2
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHH--
Q ss_conf 805698157111688999997898599973998999999971221127840328989998605778899997699069--
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDP-- 81 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~-- 81 (475)
.+|+|||=-.--.-|++.|.++|++|..|...... .....+..+.++++.... .++|++=||-.+.
T Consensus 3 ~~iaviGGD~Rq~~l~~~L~~~g~~V~~~gf~~~~---------~~~~~~~~~~~~~~~~~~---~d~iIlPvpg~~d~g 70 (296)
T PRK08306 3 MHIAVIGGDARQLELIRKLVELGAKVSLVGFDQLD---------HGFTGVAKCSSLEEALSD---VDVIILPVPGTNDEG 70 (296)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC---------CCCCCEEEECCHHHHHHC---CCEEEECCCCCCCCC
T ss_conf 48999787589999999999779979998357655---------566761773467888723---999997883225896
Q ss_pred -HHH-------HH-HHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECC------------CCCCC-CCC----
Q ss_conf -999-------99-99972078998999679865789999999998479943067------------54676-000----
Q gi|254780716|r 82 -VDQ-------LI-DKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGI------------GVSGG-VKG---- 135 (475)
Q Consensus 82 -v~~-------vi-~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~------------pVSGG-~~g---- 135 (475)
+.. ++ +.++..+.++.++.-+- +++ ...+.++++|+.++|- |.--| ..-
T Consensus 71 ~i~~~~~~~~~~l~~~~~~~l~~~~~vf~G~-~~~----~l~~~~~~~~~~~~d~~e~d~vAi~NaipTAEGai~~ai~~ 145 (296)
T PRK08306 71 EVDTVFSNEKLVLTKELLEKTPEHCTIFSGI-ANP----YLKELAETTGRKLIELFERDDVAIYNSIPTAEGAIMMAIEH 145 (296)
T ss_pred EEECCCCCCCCCHHHHHHHHCCCCCEEEEEC-CCH----HHHHHHHHCCCCEEEEECCCHHHHHCCCCCHHHHHHHHHHC
T ss_conf 3855346787632299997469998799955-998----99999997598367620020355562701489999999965
Q ss_pred ---CCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf ---35684378845489998889999987501567861898569874678988776787888999899999999642899
Q gi|254780716|r 136 ---ARSGASLMVGGNEKAYNRVENILLSISAKYQNSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKN 212 (475)
Q Consensus 136 ---A~~G~slMvGG~~~~~~~~~piL~~iaak~~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~ 212 (475)
...|...+|=|=-..=..+-..|..+.+++ +++.--+.|. ++++.+--+ -..
T Consensus 146 tp~ti~gs~~lVlG~Gr~G~~lA~~l~~lGA~V-------~V~aR~~~~~----------------a~a~~~G~~--~v~ 200 (296)
T PRK08306 146 TPITIHGSNVLVLGFGRTGMTLARTLKALGAKV-------KVGARKSAHL----------------ARITEMGYS--PVH 200 (296)
T ss_pred CCCCCCCCCEEEECCCHHHHHHHHHHHHCCCEE-------EEEECCHHHH----------------HHHHHCCCE--EEE
T ss_conf 996324765899898689999999999779969-------9997999999----------------999976985--871
Q ss_pred HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCC-CCHHHHHHHH-------HHHH-CCCCCHHH
Q ss_conf 7899999986068844307999999999740567999520010233365-8716778988-------7751-78885146
Q gi|254780716|r 213 PLEISHLFSKWDTGKLSSYLIKITAEILSSSDTITGMPIIDVICDKASQ-KGTGIRSIIE-------GHKL-SSSMTITE 283 (475)
Q Consensus 213 ~~~i~~vf~~w~~~~~~syLl~i~~~il~~k~~~~g~~lid~i~d~~~~-kgTg~Wt~~~-------a~~l-gvp~p~i~ 283 (475)
.+++.....++.==..-=+=+=+|+++|.+... +. .|.|.|.. -||---.++. |.-| |.-+|.-+
T Consensus 201 ~~~L~~~~~~~D~i~NTIPa~Vlt~~~l~~~~~--~a----vIIDLAS~PGG~Df~~A~~~Gika~lapgLPGk~APkTa 274 (296)
T PRK08306 201 LSELAEEVGEADIIFNTIPALVLTKNVLSKMPP--HA----LIIDLASKPGGTDFEYAKKLGIKALLAPGLPGKVAPKTA 274 (296)
T ss_pred HHHHHHHHCCCCEEEECCCHHHCCHHHHHCCCC--CC----EEEEECCCCCCCCHHHHHHHCCEEEECCCCCCCCCHHHH
T ss_conf 999997735699999898525439999941899--96----999947799973889999839859972899973171539
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 77788877500577
Q gi|254780716|r 284 TAIFARNLSLYRDE 297 (475)
Q Consensus 284 ~av~aR~~S~~k~~ 297 (475)
.-..++.+++.-.+
T Consensus 275 g~Ila~~i~~ll~e 288 (296)
T PRK08306 275 GQILANVLSNLLAE 288 (296)
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999999999999
No 107
>TIGR01915 npdG NADPH-dependent F420 reductase; InterPro: IPR010185 Members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase..
Probab=97.91 E-value=9.5e-05 Score=54.56 Aligned_cols=169 Identities=20% Similarity=0.248 Sum_probs=115.5
Q ss_pred EEEEE-ECCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHCCC----C----CCCCEECCCHHHHHHHCCC
Q ss_conf 05698-15711168899999789-------8599973998999999971221----1----2784032898999860577
Q gi|254780716|r 5 DIGII-GLGSMGSNLSLNILDKG-------FRLAVYNKDFELTDVFIKKISG----L----SQKVIVTKNLEQMVEAVCK 68 (475)
Q Consensus 5 ~IGiI-GLG~MG~~mA~nL~~~G-------~~V~vydr~~~~~~~l~~~~~~----~----~~~~~~~~s~~e~v~~l~~ 68 (475)
.|+++ |.|..|.+||+||+.+| .+|.+-.|++||+++-.++... . .-+++++++.+- .+.
T Consensus 2 kIAvLGGTGdqG~GLALRlA~~glmPeG~~~~iIIGSR~~EkA~EaA~ka~e~l~~~G~d~~i~~~G~~N~~A----A~~ 77 (233)
T TIGR01915 2 KIAVLGGTGDQGKGLALRLAKAGLMPEGVDNEIIIGSRDKEKAEEAAAKALEELGDQGVDRDIKVEGAENEEA----AKR 77 (233)
T ss_pred EEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHH----HHH
T ss_conf 6788448884025699999870778787775557704884569999999999997089513625754887788----723
Q ss_pred CCEEEEECCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHH----------------HHHHHHHHHHHCCCCEECC--CCC
Q ss_conf 8899997699069999999997207899899967986578----------------9999999998479943067--546
Q gi|254780716|r 69 PRKILMMVTDGDPVDQLIDKLKPLLSPEDILLDGGNSHFC----------------DTQIRSLQLSEKGIYFIGI--GVS 130 (475)
Q Consensus 69 pr~Iil~vp~g~~v~~vi~~l~~~l~~g~iiID~sts~~~----------------~t~~~~~~l~~kgi~fid~--pVS 130 (475)
.++|++.||. +++-.++..|..-|+.++||||++.---. -+.+.++.+.++|.+-+.| -+|
T Consensus 78 aDVVil~vP~-~~~~~~l~~~~~~L~~dK~Vis~~VPl~~~Ig~~~~~y~~P~eGSaA~~~a~~lpeqg~~VvaAFhN~~ 156 (233)
T TIGR01915 78 ADVVILAVPF-DHVLKTLESIKDELEADKIVISPVVPLASAIGGKGLRYLPPEEGSAAELVAKLLPEQGSKVVAAFHNIS 156 (233)
T ss_pred CCEEEEEECC-HHHHHHHHHHHHHHCCCCEEEECCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEHHHHCCCC
T ss_conf 8978998422-224789999999851892899647875000024430026873102899999853326750102121324
Q ss_pred CCC-----CCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHH
Q ss_conf 760-----00356843788454899988899999875015678618985698746789
Q gi|254780716|r 131 GGV-----KGARSGASLMVGGNEKAYNRVENILLSISAKYQNSPCCALLGPDGSGHFV 183 (475)
Q Consensus 131 GG~-----~gA~~G~slMvGG~~~~~~~~~piL~~iaak~~~~~cv~y~G~~GsGh~v 183 (475)
-.. .--..-.+|-+|=++++-+.+..+=+.|..= . -.-+|+-=..|-|
T Consensus 157 A~~L~D~~~~~~D~D~LV~g~de~A~~~V~eLA~~I~G~----R-a~d~G~LenA~~~ 209 (233)
T TIGR01915 157 AAKLKDVVDEEVDCDVLVCGDDEEAKKVVAELAEKIDGL----R-AIDAGPLENARIV 209 (233)
T ss_pred HHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCC----C-CCCCCCCHHHHHH
T ss_conf 454044003743345366268777899999984038943----2-4126771457888
No 108
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=97.91 E-value=0.00041 Score=49.84 Aligned_cols=174 Identities=13% Similarity=0.149 Sum_probs=100.7
Q ss_pred CCEEEEEECCHHHHHHHHHHHH--CCCE-EEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCH
Q ss_conf 8805698157111688999997--8985-999739989999999712211278403289899986057788999976990
Q gi|254780716|r 3 QADIGIIGLGSMGSNLSLNILD--KGFR-LAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDG 79 (475)
Q Consensus 3 k~~IGiIGLG~MG~~mA~nL~~--~G~~-V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g 79 (475)
|.+||+||.|.+|+.++..|.+ .+++ +.+|+|++++.+++.+.... .....+++++. +.|++|+=|-..
T Consensus 6 kmrVgliG~GaIG~~va~~l~~g~~~~~l~~V~~r~~~~~~~~~~~~~~----~~~~~~~~~l~---~~~DlVVE~A~~- 77 (271)
T PRK13302 6 ELRVAIAGLGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRR----PPPVVPLDQLA---THADIVVEAAPA- 77 (271)
T ss_pred CCEEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCC----CCCCCCHHHHH---HCCCEEEECCCH-
T ss_conf 6779998867899999999975899818999992887888999873589----87407889960---189999989898-
Q ss_pred HHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCC-EECCCCCCCCC----CCCCCC-EE-EEEC-CHHHH
Q ss_conf 69999999997207899899967986578999999999847994-30675467600----035684-37-8845-48999
Q gi|254780716|r 80 DPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIY-FIGIGVSGGVK----GARSGA-SL-MVGG-NEKAY 151 (475)
Q Consensus 80 ~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~-fid~pVSGG~~----gA~~G~-sl-MvGG-~~~~~ 151 (475)
+++.+....++ +.|.-++-+|..-..|..++.+.+++.|-+ |+-.|=-||-. .+..+. .+ |.+= ++..|
T Consensus 78 ~av~~~~~~~L---~~G~dlvv~SvGALad~~~l~~~A~~~g~~i~ipsGAigGlD~l~aa~~~~l~~V~~~t~K~P~~l 154 (271)
T PRK13302 78 SVLRAIVEPVL---AAGKKAIVLSVGALLRNEDLIDLARQNGGQIIVPTGALLGLDAVTAAAEGTIHSVKMITRKPPDGL 154 (271)
T ss_pred HHHHHHHHHHH---HCCCCEEEECHHHHCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCHHH
T ss_conf 99999999999---759978997557956929999999966985998070343478999986289847999963295475
Q ss_pred HHHHHHHHHHHCC--CCCCCEEEEECCC--CHHHHHHHHHH
Q ss_conf 8889999987501--5678618985698--74678988776
Q gi|254780716|r 152 NRVENILLSISAK--YQNSPCCALLGPD--GSGHFVKMIHN 188 (475)
Q Consensus 152 ~~~~piL~~iaak--~~~~~cv~y~G~~--GsGh~vKMVhN 188 (475)
.. .|.+..-... ...+|-+.|-|+. ..-.|=|=||=
T Consensus 155 ~g-~p~~~e~~~~l~~~~e~~~lF~G~Area~~~fP~NvNV 194 (271)
T PRK13302 155 KG-APFLVTNNIDIDGLTEPLLLFEGSAREAAKGFPANLNV 194 (271)
T ss_pred CC-CHHHHHHCCCHHCCCCCEEEEECCHHHHHHHCCCHHHH
T ss_conf 57-80355525770006776699606899999877650769
No 109
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=97.90 E-value=0.00014 Score=53.31 Aligned_cols=187 Identities=18% Similarity=0.190 Sum_probs=103.5
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 80569815711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
.+|++||-|+-|.+-|+||.+.|.+|.+--|.-+..+...+ +++ -..+++|.+... ++|++.+|+. .-.
T Consensus 17 k~iaVIGYGsQG~AhAlNLrDSG~~V~vglr~g~s~~~A~~------~Gf-~v~~~~eA~~~a---Dvi~~L~pD~-~q~ 85 (335)
T PRK13403 17 KTVAVIGYGSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKA------DGF-EVMSVSEAVRTA---QVVQMLLPDE-QQA 85 (335)
T ss_pred CEEEEEEECCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHH------CCC-EECCHHHHHHHC---CEEEEECCHH-HHH
T ss_conf 97999756707689885647639977999799856999998------799-316799999857---9787508858-799
Q ss_pred HHHH-HHHHCCCCCCEEEEC--CCCCHHHHHHHHHHHHHCCCC-EECCCCCCCCCC-----CCCC-CEEE-E--ECCHHH
Q ss_conf 9999-997207899899967--986578999999999847994-306754676000-----3568-4378-8--454899
Q gi|254780716|r 84 QLID-KLKPLLSPEDILLDG--GNSHFCDTQIRSLQLSEKGIY-FIGIGVSGGVKG-----ARSG-ASLM-V--GGNEKA 150 (475)
Q Consensus 84 ~vi~-~l~~~l~~g~iiID~--sts~~~~t~~~~~~l~~kgi~-fid~pVSGG~~g-----A~~G-~slM-v--GG~~~~ 150 (475)
++++ .+.|.|++|+++.=. =|.+|. ...-.+++. ++-||=.-|..- .-.| ||+. | -.+-.+
T Consensus 86 ~vy~~~i~p~lk~G~~L~FaHGfnI~~~------~I~pp~~vdV~mvAPKgpG~~VR~~y~~G~Gvp~l~AV~qD~sg~a 159 (335)
T PRK13403 86 HVYKAEVEENLREGQMLLFSHGFNIHFG------QINPPSYVDVAMVAPKSPGHLVRRVFQEGNGVPALVAVHQDATGTA 159 (335)
T ss_pred HHHHHHHCCCCCCCCEEEEECCCHHHCC------EECCCCCCCEEEECCCCCCHHHHHHHHCCCCCCEEEEEEECCCCHH
T ss_conf 9997442553689972376144311224------2457899867998999996579999871799745999976897539
Q ss_pred HHHHHHHHHHHHCCCCCCCEEE-----------EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 9888999998750156786189-----------85698746789887767878889998999999996428997899999
Q gi|254780716|r 151 YNRVENILLSISAKYQNSPCCA-----------LLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKNPLEISHL 219 (475)
Q Consensus 151 ~~~~~piL~~iaak~~~~~cv~-----------y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~~i~~v 219 (475)
.+.+...-.+++..- ..+. .+|+- --.+.|...+|--+|+.|..+ ++.+ |++ -
T Consensus 160 ~~~alaya~aiG~~r---aGv~eTtF~eEtetDLfGEQ----------~VLcGg~~~li~agFetLvea-Gy~P-e~A-Y 223 (335)
T PRK13403 160 LHVALAYAKGVGCTR---AGVIETTFQEETETDLFGEQ----------AVLCGGVTALVKAGFETLTEG-GYRP-EIA-Y 223 (335)
T ss_pred HHHHHHHHHHCCCCC---CCEEECCHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHC-CCCH-HHH-H
T ss_conf 999999998617776---77562251888876512224----------654028999999999999986-9987-999-9
Q ss_pred HHHC
Q ss_conf 9860
Q gi|254780716|r 220 FSKW 223 (475)
Q Consensus 220 f~~w 223 (475)
|+-.
T Consensus 224 fE~l 227 (335)
T PRK13403 224 FECL 227 (335)
T ss_pred HHHH
T ss_conf 9999
No 110
>PRK08269 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.82 E-value=0.0023 Score=44.40 Aligned_cols=184 Identities=11% Similarity=0.116 Sum_probs=109.4
Q ss_pred HHHHHHHHHHHCCCEEEEEECCHHHHHHHH------------------HHCCCCC-------CCCEECCCHHHHHHHCCC
Q ss_conf 116889999978985999739989999999------------------7122112-------784032898999860577
Q gi|254780716|r 14 MGSNLSLNILDKGFRLAVYNKDFELTDVFI------------------KKISGLS-------QKVIVTKNLEQMVEAVCK 68 (475)
Q Consensus 14 MG~~mA~nL~~~G~~V~vydr~~~~~~~l~------------------~~~~~~~-------~~~~~~~s~~e~v~~l~~ 68 (475)
||+.+|..++.+|++|.+||.+++..+... +.+.-.. .++... +..+..+.+..
T Consensus 1 MG~gIA~~~A~~G~~V~l~Di~~~~~e~~~~~~~~~~~~i~~~l~~~~~~g~l~~~~~~~~l~ri~~~-~~~~~~~al~d 79 (311)
T PRK08269 1 MGQGIALAFAFAGLDVTLIDFKPRDAAGFEAFDARARAEIGRPLAALVALGRIDAAQADAVLARIAVV-ARDGAADALAD 79 (311)
T ss_pred CHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC-CCCCCHHHHCC
T ss_conf 93799999981798089997980355668999999999999999999975999989999999613346-87650878478
Q ss_pred CCEEEEECCCHHHHHH-HHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHH----CCCCEECCCC-CCCCCCCCCCCEE
Q ss_conf 8899997699069999-99999720789989996798657899999999984----7994306754-6760003568437
Q gi|254780716|r 69 PRKILMMVTDGDPVDQ-LIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSE----KGIYFIGIGV-SGGVKGARSGASL 142 (475)
Q Consensus 69 pr~Iil~vp~g~~v~~-vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~----kgi~fid~pV-SGG~~gA~~G~sl 142 (475)
++.|+=.||-.-.+.. ++.+|-..+.++.|+. ..||...-+ ++++.+.. .|.||.-.|- .--++ +
T Consensus 80 aDlVIEAV~E~l~iK~~vf~~l~~~~~~~~Ila-SNTSsl~is-~la~~~~~p~R~ig~HFfnP~~~m~lVE-------V 150 (311)
T PRK08269 80 ADLVFEAVPEVLDAKRDALRWLGRHVDADATIA-STTSTFLVT-DLQRHVAHPARFLNAHWLNPAYLMPLVE-------V 150 (311)
T ss_pred CCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEE-EECCCCCHH-HHHHHCCCCCEEEEECCCCCCCCCCCCC-------C
T ss_conf 999998870588999999999997679874798-306627899-9997469813089962477646685011-------0
Q ss_pred EEEC--CHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf 8845--48999888999998750156786189856987467898877678788899989999999964289978999999
Q gi|254780716|r 143 MVGG--NEKAYNRVENILLSISAKYQNSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKNPLEISHLF 220 (475)
Q Consensus 143 MvGG--~~~~~~~~~piL~~iaak~~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~~i~~vf 220 (475)
+.|- ++++.+.+..+++.+... ...+.+. -|.. -|-|.+ -.+.|++.++..+ --+.++|-.++
T Consensus 151 v~g~~Ts~e~~~~~~~~~~~~GK~------pVv~kd~-pGFi----~NRi~~---~~~~EA~~lv~eG-vas~edID~a~ 215 (311)
T PRK08269 151 SPSDATDPAVVDRLAALLERIGKV------PVVCGPS-PGYI----VPRIQA---LAMNEAARMVEEG-VASAEDIDTAI 215 (311)
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCE------EEEECCC-CCCH----HHHHHH---HHHHHHHHHHHCC-CCCHHHHHHHH
T ss_conf 789999999999999999973980------6996787-7507----999889---9999999999829-99999999999
Q ss_pred HH
Q ss_conf 86
Q gi|254780716|r 221 SK 222 (475)
Q Consensus 221 ~~ 222 (475)
..
T Consensus 216 ~~ 217 (311)
T PRK08269 216 RT 217 (311)
T ss_pred HH
T ss_conf 86
No 111
>COG0059 IlvC Ketol-acid reductoisomerase [Amino acid transport and metabolism / Coenzyme metabolism]
Probab=97.78 E-value=0.00024 Score=51.56 Aligned_cols=94 Identities=20% Similarity=0.308 Sum_probs=67.9
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 805698157111688999997898599973998999-9999712211278403289899986057788999976990699
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELT-DVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~-~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
.+|++||-|+-|.+-|+||.+.|.+|++--|.-+.. +...+. ++ -+.+++|.+.. .++|++.+|+- +-
T Consensus 19 K~iaIIGYGsQG~ahalNlRDSGlnViiGlr~g~~s~~kA~~d------Gf-~V~~v~ea~k~---ADvim~L~PDe-~q 87 (338)
T COG0059 19 KKVAIIGYGSQGHAQALNLRDSGLNVIIGLRKGSSSWKKAKED------GF-KVYTVEEAAKR---ADVVMILLPDE-QQ 87 (338)
T ss_pred CEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHC------CC-EEECHHHHHHC---CCEEEEECCHH-HH
T ss_conf 8699990270878887422424874799856887248999966------97-75139998522---79999818654-67
Q ss_pred HHHHH-HHHHCCCCCCEEEE--CCCCCHH
Q ss_conf 99999-99720789989996--7986578
Q gi|254780716|r 83 DQLID-KLKPLLSPEDILLD--GGNSHFC 108 (475)
Q Consensus 83 ~~vi~-~l~~~l~~g~iiID--~sts~~~ 108 (475)
.+|+. .+.|.|++|+.+.= +=|.+|.
T Consensus 88 ~~vy~~~I~p~Lk~G~aL~FaHGfNihf~ 116 (338)
T COG0059 88 KEVYEKEIAPNLKEGAALGFAHGFNIHFG 116 (338)
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCEECC
T ss_conf 89999874345227866776265531133
No 112
>TIGR01035 hemA glutamyl-tRNA reductase; InterPro: IPR000343 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway . The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin . The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) . This entry represents glutamyl-tRNA reductase (1.2.1.70 from EC), which reduces glutamyl-tRNA to glutamate-1-semialdehyde during the first stage of tetrapyrrole biosynthesis by the C5 pathway , . This enzyme required NADPH as a coenzyme.; GO: 0008883 glutamyl-tRNA reductase activity, 0050661 NADP binding, 0033014 tetrapyrrole biosynthetic process.
Probab=97.77 E-value=0.00019 Score=52.36 Aligned_cols=179 Identities=13% Similarity=0.211 Sum_probs=101.8
Q ss_pred CCEEEEEECCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHCCCCCCCCEECC--CHHHHHHHCCCCCEEEEECCCH
Q ss_conf 880569815711168899999789-8599973998999999971221127840328--9899986057788999976990
Q gi|254780716|r 3 QADIGIIGLGSMGSNLSLNILDKG-FRLAVYNKDFELTDVFIKKISGLSQKVIVTK--NLEQMVEAVCKPRKILMMVTDG 79 (475)
Q Consensus 3 k~~IGiIGLG~MG~~mA~nL~~~G-~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~--s~~e~v~~l~~pr~Iil~vp~g 79 (475)
..++=+||.|-||.=.|+||..+| ..|.+-|||.+|+++|+++.... ....+. .++++.+.|...++||.+-.++
T Consensus 185 ~~~~LliGAGeMg~Lva~~L~~~~v~~~~i~NRt~~rA~~LA~e~~~P--~~~~f~~La~~~L~~~L~~~DivissTgA~ 262 (436)
T TIGR01035 185 GKKVLLIGAGEMGELVAKHLREKGVGKVLIANRTYERAEKLAKELGGP--EAVKFEALALEKLEEALAEADIVISSTGAP 262 (436)
T ss_pred CCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCC--CCCCCCHHHHHHHHHHHHHCCEEEEECCCC
T ss_conf 641899827457999999996489528988556778999999870786--645444554899999974288999855765
Q ss_pred HHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHH-HHHHCCCCEECCCCCCCCCCCCCCC-E-EEEECCHHHHHHHHH
Q ss_conf 699999999972078998999679865789999999-9984799430675467600035684-3-788454899988899
Q gi|254780716|r 80 DPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSL-QLSEKGIYFIGIGVSGGVKGARSGA-S-LMVGGNEKAYNRVEN 156 (475)
Q Consensus 80 ~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~-~l~~kgi~fid~pVSGG~~gA~~G~-s-lMvGG~~~~~~~~~p 156 (475)
.++- + . ...+.+.+..+ .-.......+|-.|=--...+..-+ . ++. ..|-+++
T Consensus 263 ~pi~----------~-------~--~~~e~a~~~Rr~de~~~pl~~~DIAvPRdvd~~v~~L~~vfLy-----~vDDL~~ 318 (436)
T TIGR01035 263 EPIV----------S-------K--EDVERALKERRRDEAARPLFIVDIAVPRDVDPEVAKLEGVFLY-----DVDDLKE 318 (436)
T ss_pred CCCC----------C-------C--HHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHCCCCEEEE-----EECCHHH
T ss_conf 3100----------2-------0--3489999972220015886999758899863786222966997-----3031389
Q ss_pred HHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHH
Q ss_conf 99987501567861898569874678988776787888999899999999642899789999998606884430799999
Q gi|254780716|r 157 ILLSISAKYQNSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKNPLEISHLFSKWDTGKLSSYLIKIT 236 (475)
Q Consensus 157 iL~~iaak~~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~~i~~vf~~w~~~~~~syLl~i~ 236 (475)
+-+.=.++ -. +.+..++.|+. +|+.....+|+.-...-+.-++-
T Consensus 319 ~~~~N~a~------------------------R~-----~~~~~ae~I~~-------~E~~~f~~w~~~l~~~p~I~~Lr 362 (436)
T TIGR01035 319 VVEENLAE------------------------RR-----EEAEKAELIVE-------EEVAEFKQWLRSLEVEPTIKELR 362 (436)
T ss_pred HHHHHHHH------------------------HH-----HHHHHHHHHHH-------HHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 99999999------------------------99-----99999999999-------99999999998658317889999
Q ss_pred HHHHHHC
Q ss_conf 9999740
Q gi|254780716|r 237 AEILSSS 243 (475)
Q Consensus 237 ~~il~~k 243 (475)
+.+..-.
T Consensus 363 ~~ae~~~ 369 (436)
T TIGR01035 363 SKAEEVR 369 (436)
T ss_pred HHHHHHH
T ss_conf 9999999
No 113
>PRK06823 ornithine cyclodeaminase; Validated
Probab=97.75 E-value=0.00026 Score=51.36 Aligned_cols=115 Identities=15% Similarity=0.160 Sum_probs=83.0
Q ss_pred CEEEEEECCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHH
Q ss_conf 8056981571116889999978--98599973998999999971221127840328989998605778899997699069
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDK--GFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDP 81 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~--G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~ 81 (475)
+.+|+||.|.++...+.-+..- --+|.+|||++++.+.|.+......-.+..+.+++|.+...+ +|+++-|+..+
T Consensus 129 ~~l~iiGtG~QA~~~l~a~~~v~~i~~v~v~~r~~~~~~~f~~~~~~~~~~v~~~~~~~eav~~AD---IIvtaT~s~~P 205 (315)
T PRK06823 129 KAIGIVGTGIQARMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQALGFAVNTTLDAAEVAHAAN---LIVTTTPSREP 205 (315)
T ss_pred CEEEEECCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHCC---EEEEEECCCCC
T ss_conf 569997718999999999987187109999469979999999999861990799489999974277---47988789996
Q ss_pred HHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHH-HHCCCCEECC
Q ss_conf 999999997207899899967986578999999999-8479943067
Q gi|254780716|r 82 VDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQL-SEKGIYFIGI 127 (475)
Q Consensus 82 v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l-~~kgi~fid~ 127 (475)
+- . ...++||..|.-.|...| ..+++...+ .....-|+|-
T Consensus 206 v~---~--~~~lkpG~hi~~iGs~~p-~~~Eld~~~l~~a~~vvvD~ 246 (315)
T PRK06823 206 LL---Q--AEDIQPGTHITAVGADSP-GKQELDAELVARADKILVDS 246 (315)
T ss_pred CC---C--CCCCCCCCEEEECCCCCC-CCCCCCHHHHHCCCEEEECC
T ss_conf 41---6--555789967984279994-11004999991498999887
No 114
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=97.73 E-value=0.0022 Score=44.49 Aligned_cols=114 Identities=16% Similarity=0.221 Sum_probs=71.4
Q ss_pred EEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHH--HHCCCCCEEEEECCCHHHH
Q ss_conf 05698157111688999997898599973998999999971221127840328989998--6057788999976990699
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMV--EAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v--~~l~~pr~Iil~vp~g~~v 82 (475)
++=++|.|..|+.+++.|.++|.++.+.|.++++++++.+++... +.+=.+-.|+. ..++++|.+++++|+....
T Consensus 419 hvii~G~Gr~G~~va~~L~~~~~~~vvid~d~~~v~~~~~~g~~v---~~GDa~~~~~L~~agi~~A~~vvit~~d~~~~ 495 (558)
T PRK10669 419 HALLVGYGRVGSLLGEKLLASGIPLVVIETSRTRVDELRERGIRA---VLGNAANEEIMQLAHLDCARWLLLTIPNGYEA 495 (558)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCEE---EEECCCCHHHHHHCCCCCCCEEEEEECCHHHH
T ss_conf 989989886699999999987998899989899999999689979---99789988999857913249999981988999
Q ss_pred HHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECC
Q ss_conf 999999972078998999679865789999999998479943067
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGI 127 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~ 127 (475)
..++..+...-..-.|++-+. ..+..+++++.|.+.+=.
T Consensus 496 ~~iv~~~r~~~p~~~IiaRa~------~~~~~~~L~~aGA~~VV~ 534 (558)
T PRK10669 496 GEIVASAREKNPDIEIIARAH------YDDEVAYITERGANQVVM 534 (558)
T ss_pred HHHHHHHHHHCCCCEEEEEEC------CHHHHHHHHHCCCCEEEC
T ss_conf 999999998786986999979------899999999779998989
No 115
>COG4007 Predicted dehydrogenase related to H2-forming N5,N10-methylenetetrahydromethanopterin dehydrogenase [General function prediction only]
Probab=97.68 E-value=0.0074 Score=40.63 Aligned_cols=185 Identities=11% Similarity=0.157 Sum_probs=114.7
Q ss_pred EEEEECCHH--------------------HHHHHHHHHHCCCEEEEEECCHHHHHHH-HHHCCCCCCCCEECCCHHHHHH
Q ss_conf 569815711--------------------1688999997898599973998999999-9712211278403289899986
Q gi|254780716|r 6 IGIIGLGSM--------------------GSNLSLNILDKGFRLAVYNKDFELTDVF-IKKISGLSQKVIVTKNLEQMVE 64 (475)
Q Consensus 6 IGiIGLG~M--------------------G~~mA~nL~~~G~~V~vydr~~~~~~~l-~~~~~~~~~~~~~~~s~~e~v~ 64 (475)
|.+.|.||- |..||-.++++|++|...+.+.+-.++- .+. -+++++....+-.+.+
T Consensus 4 v~vygagnq~ly~~~l~~pek~ggE~PyGGa~mAiefAeAGHDVVLaePn~d~~dd~~w~~--vedAGV~vv~dD~eaa- 80 (340)
T COG4007 4 VAVYGAGNQRLYLEQLNLPEKYGGEPPYGGARMAIEFAEAGHDVVLAEPNRDIMDDEHWKR--VEDAGVEVVSDDAEAA- 80 (340)
T ss_pred EEEECCCCCCHHHHHCCCHHHHCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHH--HHHCCCEEECCCHHHH-
T ss_conf 8997277501138761975651899998704889999874785796368722038899999--9865827742735553-
Q ss_pred HCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHH-HHHHHHH----CCCC-EECCCCCCCCCCCCC
Q ss_conf 057788999976990699999999972078998999679865789999-9999984----7994-306754676000356
Q gi|254780716|r 65 AVCKPRKILMMVTDGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQI-RSLQLSE----KGIY-FIGIGVSGGVKGARS 138 (475)
Q Consensus 65 ~l~~pr~Iil~vp~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~-~~~~l~~----kgi~-fid~pVSGG~~gA~~ 138 (475)
+...+.++.-|-|+++-.+..++++++.+|.+|..+-|++|-.--. +...|+- .|+. +--++|-|+|.
T Consensus 81 --~~~Ei~VLFTPFGk~T~~Iarei~~hvpEgAVicnTCT~sp~vLy~~LE~~Lr~kR~dVGvssmHPAgvPGtp~---- 154 (340)
T COG4007 81 --EHGEIHVLFTPFGKATFGIAREILEHVPEGAVICNTCTVSPVVLYYSLEGELRTKREDVGVSSMHPAGVPGTPQ---- 154 (340)
T ss_pred --HCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCC----
T ss_conf --05658999626532667899999843867868616666764688877656645735535723568778999877----
Q ss_pred CCEEEEE---------CCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHH---HHHHHHHHHHHHHHHHH
Q ss_conf 8437884---------54899988899999875015678618985698746789887767---87888999899999999
Q gi|254780716|r 139 GASLMVG---------GNEKAYNRVENILLSISAKYQNSPCCALLGPDGSGHFVKMIHNG---IEYANMQLIADIYGILR 206 (475)
Q Consensus 139 G~slMvG---------G~~~~~~~~~piL~~iaak~~~~~cv~y~G~~GsGh~vKMVhNg---Iey~~mq~iaE~~~~l~ 206 (475)
.-...++ .+++-.+++..+.+.++..+ |+=|.- .+--|-.+ .---..+++.+.|.+-.
T Consensus 155 h~~yviagr~t~g~elATeEQi~r~velaes~Gk~~-------yv~pad---v~s~VaDmg~lvtav~l~gvldyy~Vg~ 224 (340)
T COG4007 155 HGHYVIAGRSTEGKELATEEQIERCVELAESTGKEV-------YVLPAD---VVSAVADMGVLVTAVALSGVLDYYYVGT 224 (340)
T ss_pred CCEEEEECCCCCCEEECCHHHHHHHHHHHHHCCCCE-------EECCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 763898216777623034999999999998619722-------762788---8877623578999999999989998877
Q ss_pred HHC
Q ss_conf 642
Q gi|254780716|r 207 DSL 209 (475)
Q Consensus 207 ~~~ 209 (475)
+..
T Consensus 225 qIi 227 (340)
T COG4007 225 QII 227 (340)
T ss_pred HHH
T ss_conf 872
No 116
>PRK11579 putative oxidoreductase; Provisional
Probab=97.68 E-value=0.0036 Score=42.93 Aligned_cols=112 Identities=14% Similarity=0.153 Sum_probs=78.9
Q ss_pred CCC-CEEEEEECCHHHHHH-HHHHHH-CCCE-EEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEEC
Q ss_conf 998-805698157111688-999997-8985-999739989999999712211278403289899986057788999976
Q gi|254780716|r 1 MKQ-ADIGIIGLGSMGSNL-SLNILD-KGFR-LAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMV 76 (475)
Q Consensus 1 M~k-~~IGiIGLG~MG~~m-A~nL~~-~G~~-V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~v 76 (475)
|++ -.+|+||+|.+|..+ +..+.. .|.+ |.++|++++++++ . ...+..+.+++++.+. +.++.|+++.
T Consensus 1 M~~~irvgiiG~G~~~~~~h~~~~~~~~~~~l~av~d~~~~~~~a---~----~~~~~~~~~~~~ll~~-~~id~V~i~t 72 (346)
T PRK11579 1 MSDKIRVGLIGYGYASKTFHAPLIAGTPGLELAAVSSSDETKVKA---D----WPTVTVVSEPKHLFND-PNIDLIVIPT 72 (346)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHC---C----CCCCCEECCHHHHHCC-CCCCEEEECC
T ss_conf 998875999936299999999999629991999997989999950---2----5899538999999459-9999999979
Q ss_pred CCHHHHHHHHHHHHHCCCCCCEEEEC-CCCCHHHHHHHHHHHHHCCCC
Q ss_conf 99069999999997207899899967-986578999999999847994
Q gi|254780716|r 77 TDGDPVDQLIDKLKPLLSPEDILLDG-GNSHFCDTQIRSLQLSEKGIY 123 (475)
Q Consensus 77 p~g~~v~~vi~~l~~~l~~g~iiID~-sts~~~~t~~~~~~l~~kgi~ 123 (475)
|+..+.+-++.-+... -.++++= =+.+..+..++.+.++++|+.
T Consensus 73 p~~~H~~~~~~al~aG---khv~~EKP~a~~~~~a~~l~~~a~~~g~~ 117 (346)
T PRK11579 73 PNDTHFPLAKAALEAG---KHVVVDKPFTVTLSQARELDALAKSLGRV 117 (346)
T ss_pred CCHHHHHHHHHHHHCC---CCEEECCCCCCCHHHHHHHHHHHHHCCCE
T ss_conf 9678999999999879---94895387678799999999999872967
No 117
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=97.64 E-value=0.00043 Score=49.71 Aligned_cols=74 Identities=16% Similarity=0.205 Sum_probs=54.7
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 805698157111688999997898-5999739989999999712211278403289899986057788999976990699
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGF-RLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~-~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
.++-+||.|.||.-.+++|.++|. ++.+.||+.++++++.++... .....++++.+.+...++|+++..++.++
T Consensus 182 ~~vlvvGaGem~~l~~k~L~~~g~~~i~v~nRt~~ra~~la~~~~~-----~~~~~~~~l~~~l~~aDivisaT~a~~~i 256 (414)
T PRK13940 182 KNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN-----ASAHYLSELPQLIKKADIIIAAVNVLEYI 256 (414)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCC-----CCCCCHHHHHHHHHHCCEEEEECCCCHHH
T ss_conf 8389966864789999999976998799945756779999997088-----85016999999986388799816982444
No 118
>pfam02423 OCD_Mu_crystall Ornithine cyclodeaminase/mu-crystallin family. This family contains the bacterial Ornithine cyclodeaminase enzyme EC:4.3.1.12, which catalyses the deamination of ornithine to proline. This family also contains mu-Crystallin the major component of the eye lens in several Australian marsupials, mRNA for this protein has also been found in human retina.
Probab=97.62 E-value=0.00081 Score=47.70 Aligned_cols=115 Identities=15% Similarity=0.254 Sum_probs=79.8
Q ss_pred CEEEEEECCHHHHHHHHHHHH--CCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHH-
Q ss_conf 805698157111688999997--89859997399899999997122112784032898999860577889999769906-
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILD--KGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGD- 80 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~--~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~- 80 (475)
..+|+||.|.++..-.+-+.. .--+|.+|||++++.+.|.+......-.+..+.++++.+...+ +|+++-++.+
T Consensus 130 ~~l~iiGaG~QA~~~l~al~~v~~i~~v~v~~r~~~~~~~f~~~~~~~~~~v~~~~~~~~av~~AD---IIvtaT~s~~~ 206 (312)
T pfam02423 130 STLAIIGAGAQAEFQAEALSAVLPIEEIRIYDRDPEAAEKFARNLQGKGFEIVACTSAEEAVEGAD---IVVTVTPDKEF 206 (312)
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEECCHHHHHHCCC---EEEEEECCCCC
T ss_conf 579996462538999999996199768999968989999999999834996599489999971499---89997359977
Q ss_pred HHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECC
Q ss_conf 99999999972078998999679865789999999998479943067
Q gi|254780716|r 81 PVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGI 127 (475)
Q Consensus 81 ~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~ 127 (475)
++ +. ...+++|..|+-.|...|.. +++...+-.+.--|+|.
T Consensus 207 P~---~~--~~~l~~G~hv~~vGs~~p~~-~El~~~~~~~a~v~vD~ 247 (312)
T pfam02423 207 PI---LK--AEWVKPGVHINAVGADCPGK-TELDPDILLRADIFVDY 247 (312)
T ss_pred CC---CC--HHHCCCCCEEEEECCCCCCC-CCCCHHHHHCCCEEECC
T ss_conf 50---07--78838986899726999970-43689998208176066
No 119
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=97.62 E-value=0.0029 Score=43.65 Aligned_cols=101 Identities=18% Similarity=0.311 Sum_probs=66.1
Q ss_pred EEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-CCCCCCCCEE-CCCHHHHHHH-CCCCCEEEEECCCHHH
Q ss_conf 05698157111688999997898599973998999999971-2211278403-2898999860-5778899997699069
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKK-ISGLSQKVIV-TKNLEQMVEA-VCKPRKILMMVTDGDP 81 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~-~~~~~~~~~~-~~s~~e~v~~-l~~pr~Iil~vp~g~~ 81 (475)
+|.+||+|.+|..+|++|.+.|++|.+-|+++++++++.+. .... -+.+ ..+.+-+-+. ++..+.++.+..+ ..
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~--~v~gd~t~~~~L~~agi~~aD~vva~t~~-d~ 78 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTH--VVIGDATDEDVLEEAGIDDADAVVAATGN-DE 78 (225)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCEE--EEEECCCCHHHHHHCCCCCCCEEEEEECC-CH
T ss_conf 8999898578899999998789908999768899998632000449--99926889899986798638999998088-67
Q ss_pred HHHHHHHHHH-CCCCCCEEEECCCCCHH
Q ss_conf 9999999972-07899899967986578
Q gi|254780716|r 82 VDQLIDKLKP-LLSPEDILLDGGNSHFC 108 (475)
Q Consensus 82 v~~vi~~l~~-~l~~g~iiID~sts~~~ 108 (475)
+..++-.+.. .+..-.++.-..+..+.
T Consensus 79 ~N~i~~~la~~~~gv~~viar~~~~~~~ 106 (225)
T COG0569 79 VNSVLALLALKEFGVPRVIARARNPEHE 106 (225)
T ss_pred HHHHHHHHHHHHCCCCEEEEEECCCHHH
T ss_conf 9999999999873998499995694167
No 120
>PRK13301 putative L-aspartate dehydrogenase; Provisional
Probab=97.56 E-value=0.0015 Score=45.71 Aligned_cols=118 Identities=16% Similarity=0.271 Sum_probs=71.3
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCC---CEEEE-EECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEEC
Q ss_conf 99880569815711168899999789---85999-739989999999712211278403289899986057788999976
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKG---FRLAV-YNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMV 76 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G---~~V~v-ydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~v 76 (475)
|++ .||+||+|.||+.++..|...+ +.+.+ +++..+..+.+ ...+..+.++.+++. .+|++|+=|-
T Consensus 1 M~~-rVgiiG~GAIG~~Va~~l~~~~~~~~~l~~~~~~~~~~~~~~-------~~~~~~~~~~~~lla--~~pDlVvE~A 70 (267)
T PRK13301 1 MTH-RIAFIGLGAIASDVAAGLLADAAQPCQLAALTRNAADLPPAL-------AGRVALLDGLPGLLA--WRPDLVVEAA 70 (267)
T ss_pred CCE-EEEEECCCHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHH-------CCCCCCCCCHHHHHC--CCCCEEEECC
T ss_conf 951-799985169999999998617776528999815335555553-------256654577577741--2899999897
Q ss_pred CCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHH---HHHHHHHHHCCCC-EECCCCCCC
Q ss_conf 9906999999999720789989996798657899---9999999847994-306754676
Q gi|254780716|r 77 TDGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDT---QIRSLQLSEKGIY-FIGIGVSGG 132 (475)
Q Consensus 77 p~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t---~~~~~~l~~kgi~-fid~pVSGG 132 (475)
+. .+|.+....+ |+.|.-++-+|..-..|. .++.+.+++.|-+ |+-.|=-||
T Consensus 71 s~-~Av~~~a~~v---L~~G~dlvv~SvGALaD~~l~~~l~~~A~~~g~~i~ipsGAIgG 126 (267)
T PRK13301 71 GQ-QAIAEHAEGC---LTAGLDMIICSAGALADDALRARLIAAAEAGGARIRVPAGAIAG 126 (267)
T ss_pred CH-HHHHHHHHHH---HHCCCCEEEECHHHHCCHHHHHHHHHHHHHCCCEEEECCCHHHC
T ss_conf 98-9999999999---97599699982378479889999999999779869974730104
No 121
>KOG2741 consensus
Probab=97.56 E-value=0.0039 Score=42.67 Aligned_cols=118 Identities=11% Similarity=0.170 Sum_probs=91.9
Q ss_pred EEEEEECCHHHHHHHHHHHHC---CCE-EEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHH
Q ss_conf 056981571116889999978---985-9997399899999997122112784032898999860577889999769906
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDK---GFR-LAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGD 80 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~---G~~-V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~ 80 (475)
.+||+|+|.|+.-.+++|... ++. |.+++|+.+++++|++..... +.+.+.+.+||+++ +..++|.+..|+..
T Consensus 8 r~Gi~g~g~ia~~f~~al~~~p~s~~~Ivava~~s~~~A~~fAq~~~~~--~~k~y~syEeLakd-~~vDvVyi~~~~~q 84 (351)
T KOG2741 8 RWGIVGAGRIARDFVRALHTLPESNHQIVAVADPSLERAKEFAQRHNIP--NPKAYGSYEELAKD-PEVDVVYISTPNPQ 84 (351)
T ss_pred EEEEEEHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHCCCC--CCCCCCCHHHHHCC-CCCCEEEECCCCCC
T ss_conf 8988604677899999721475458279999655278899999865999--87425579988249-87687996799800
Q ss_pred HHHHHHHHHHHCCCCCCEEEEC-CCCCHHHHHHHHHHHHHCCCCEECCC
Q ss_conf 9999999997207899899967-98657899999999984799430675
Q gi|254780716|r 81 PVDQLIDKLKPLLSPEDILLDG-GNSHFCDTQIRSLQLSEKGIYFIGIG 128 (475)
Q Consensus 81 ~v~~vi~~l~~~l~~g~iiID~-sts~~~~t~~~~~~l~~kgi~fid~p 128 (475)
+.+-+..-|... -.++++- -..+..+..++.+.++.+|+.|++.-
T Consensus 85 H~evv~l~l~~~---K~VL~EKPla~n~~e~~~iveaA~~rgv~~meg~ 130 (351)
T KOG2741 85 HYEVVMLALNKG---KHVLCEKPLAMNVAEAEEIVEAAEARGVFFMEGL 130 (351)
T ss_pred HHHHHHHHHHCC---CCEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 899999999759---9578656553889999999999997694887644
No 122
>PRK12557 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein; Provisional
Probab=97.54 E-value=0.011 Score=39.26 Aligned_cols=185 Identities=14% Similarity=0.185 Sum_probs=113.9
Q ss_pred HHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCC
Q ss_conf 1688999997898599973998999-999971221127840328989998605778899997699069999999997207
Q gi|254780716|r 15 GSNLSLNILDKGFRLAVYNKDFELT-DVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQLIDKLKPLL 93 (475)
Q Consensus 15 G~~mA~nL~~~G~~V~vydr~~~~~-~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi~~l~~~l 93 (475)
|+.||-.++++|++|..-+.+++.. ++.-+. -+++++....+-.|.+ +...+.++.-|-|+.+-.+...+++++
T Consensus 32 Gs~MAiefA~AGHDVvLaePn~~~lsee~w~~--VEdAgVkvv~dD~eAa---kh~Ei~ilFTPFGk~T~~Iak~Il~hl 106 (341)
T PRK12557 32 GSRMAIEFAEAGHDVVLAEPNKSMLSDEQWKR--VEDAGVKVVTDDAEAA---KHAEIAVLFTPFGKKTVEIAKEILPHL 106 (341)
T ss_pred CHHHHHHHHHCCCCEEEECCCCCCCCHHHHHH--HHHCCCEEECCCHHHH---HCCEEEEEECCCCCHHHHHHHHHHHHC
T ss_conf 04999999975784797357623169899999--9974966733616665---267589996476406789999886218
Q ss_pred CCCCEEEECCCCCHHHHHH-HHHHHHH----CCCC-EECCCCCCCCCC--------CCCCCEEEEECCHHHHHHHHHHHH
Q ss_conf 8998999679865789999-9999984----7994-306754676000--------356843788454899988899999
Q gi|254780716|r 94 SPEDILLDGGNSHFCDTQI-RSLQLSE----KGIY-FIGIGVSGGVKG--------ARSGASLMVGGNEKAYNRVENILL 159 (475)
Q Consensus 94 ~~g~iiID~sts~~~~t~~-~~~~l~~----kgi~-fid~pVSGG~~g--------A~~G~slMvGG~~~~~~~~~piL~ 159 (475)
..|.+|..+-|++|-.--. +...++. .||. |--++|-|+|.. +.+|..+ .+++-.+++-.+.+
T Consensus 107 pe~AVIcnTCTvspvvLy~~Le~eLr~kR~DvGisSmHPA~VPGTp~h~~Yviag~~~~g~~~---AteEQi~k~veL~e 183 (341)
T PRK12557 107 PEGAVICNTCTVSPVVLYYSLEVELRTKRKDVGISSMHPAAVPGTPQHGHYVIAGKATNGTEY---ATEEQIEKCVELAE 183 (341)
T ss_pred CCCCEEECCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC---CCHHHHHHHHHHHH
T ss_conf 778776166677599999999999830124247335687789998767528973677787401---46999999999999
Q ss_pred HHHCCCCCCCEEEEECCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf 875015678618985698746789-887767878889998999999996428997899
Q gi|254780716|r 160 SISAKYQNSPCCALLGPDGSGHFV-KMIHNGIEYANMQLIADIYGILRDSLNKNPLEI 216 (475)
Q Consensus 160 ~iaak~~~~~cv~y~G~~GsGh~v-KMVhNgIey~~mq~iaE~~~~l~~~~~~~~~~i 216 (475)
.+.... |+=|..--..| -|- --.--..++.+.+-|.+-.+..+ -++++
T Consensus 184 S~gK~~-------yvvPadv~s~VaDMg-slvtav~l~gvldyy~vg~~ii~-AP~~M 232 (341)
T PRK12557 184 STGKEV-------YVVPADVSSTVADMG-SLLTAVTLSGVLDYYSVGTKIIK-APKEM 232 (341)
T ss_pred HCCCCC-------EEECHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHC-CHHHH
T ss_conf 629851-------660656524454568-89999999999999999899864-85999
No 123
>PRK08618 ornithine cyclodeaminase; Validated
Probab=97.54 E-value=0.00082 Score=47.64 Aligned_cols=114 Identities=16% Similarity=0.220 Sum_probs=79.1
Q ss_pred CEEEEEECCHHHHHHHHHHHH-C-CCEEEEEECCHHHHHHHHHHCCC-CCCCCEECCCHHHHHHHCCCCCEEEEECCCHH
Q ss_conf 805698157111688999997-8-98599973998999999971221-12784032898999860577889999769906
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILD-K-GFRLAVYNKDFELTDVFIKKISG-LSQKVIVTKNLEQMVEAVCKPRKILMMVTDGD 80 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~-~-G~~V~vydr~~~~~~~l~~~~~~-~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~ 80 (475)
..+|+||.|..+...++-+.. . =-+|.+|||++++.++|.++... .+-.+.++.++++.+...+ +|+++-++.+
T Consensus 128 ~~l~iiGaG~QA~~~~~a~~~v~~i~~v~v~~r~~~~~~~f~~~~~~~~g~~v~~~~~~~~av~~aD---iV~taT~s~~ 204 (325)
T PRK08618 128 KTLCLIGTGGQAKGQLEAVLAVRDIEKVRVYSRTFEKAYAFAQEIQSKFNTEIYVVESADEAIEEAD---IIVTVTNAKT 204 (325)
T ss_pred CEEEEECCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHCC---EEEEECCCCC
T ss_conf 5699975607999999999860896689999479999999999998750996699589999984398---8999259998
Q ss_pred HHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHH-HHHHCCCCEECC
Q ss_conf 99999999972078998999679865789999999-998479943067
Q gi|254780716|r 81 PVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSL-QLSEKGIYFIGI 127 (475)
Q Consensus 81 ~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~-~l~~kgi~fid~ 127 (475)
++ +++ .+++|..|+-.|...|. .++... .+.....-|+|.
T Consensus 205 Pv---~~~---~l~~g~hi~aiGs~~p~-~~El~~~~l~~a~~vvvD~ 245 (325)
T PRK08618 205 PV---FSE---KLKKGVHINAVGSFRPD-MQEIPSEAIARADKVVVES 245 (325)
T ss_pred CC---CCC---CCCCCEEECCCCCCCCC-CCCCCHHHHHHCCEEEECC
T ss_conf 64---454---35887175132468986-3457899995199899987
No 124
>PRK06141 ornithine cyclodeaminase; Validated
Probab=97.54 E-value=0.00047 Score=49.41 Aligned_cols=115 Identities=14% Similarity=0.117 Sum_probs=78.8
Q ss_pred CEEEEEECCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHH
Q ss_conf 8056981571116889999978--98599973998999999971221127840328989998605778899997699069
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDK--GFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDP 81 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~--G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~ 81 (475)
..+|+||.|..+...+.-+..- --+|.+|+|++++.++|.++.....-.+..+.++++.+...+ +|++.-++.++
T Consensus 126 ~~l~iiG~G~QA~~~l~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~~~~~~~~~~~~~av~~aD---II~taT~s~~P 202 (313)
T PRK06141 126 RRLLVVGTGRLASLLALAHASVRPIKQVRVWGRNPAKAAALAAELREQGFDAEVVTDLEAAVRQAD---IISCATLSTEP 202 (313)
T ss_pred CEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHCC---EEEECCCCCCC
T ss_conf 679997788999999999997289758999938989999999999850997599589999861087---79971688986
Q ss_pred HHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECC
Q ss_conf 9999999972078998999679865789999999998479943067
Q gi|254780716|r 82 VDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGI 127 (475)
Q Consensus 82 v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~ 127 (475)
+ ++ ...+++|..|+-.|...|. .++....+-.+.--|+|.
T Consensus 203 v---~~--~~~l~~G~hI~avGs~~p~-~~El~~~~~~~a~v~vD~ 242 (313)
T PRK06141 203 L---VR--GEWLRPGTHLDLVGSFTPD-MRECDDAAIARASVYVDT 242 (313)
T ss_pred C---CC--CCCCCCCCEEEEECCCCCC-CEECCHHHHCCCEEEEEC
T ss_conf 4---46--4446787269763589987-554597786077399918
No 125
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC; InterPro: IPR011967 This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring . The sequences included in this entry are all found in possible operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN . Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. .
Probab=97.52 E-value=0.00023 Score=51.74 Aligned_cols=149 Identities=15% Similarity=0.217 Sum_probs=88.9
Q ss_pred CCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----------HCC-------CCCCCCEECCCHHHHHH
Q ss_conf 880569815711168899999789859997399899999997-----------122-------11278403289899986
Q gi|254780716|r 3 QADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIK-----------KIS-------GLSQKVIVTKNLEQMVE 64 (475)
Q Consensus 3 k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~-----------~~~-------~~~~~~~~~~s~~e~v~ 64 (475)
..+|.+||-|.||.++|.==+++||+|..||..++....-++ +++ ...+.+.|+.+++++++
T Consensus 5 ~v~vaVIGaGaMGaGIA~VAA~aGH~V~LYD~r~eA~a~a~agIe~~L~~lV~kgkL~a~e~e~~l~Rl~PV~~l~alAd 84 (508)
T TIGR02279 5 VVKVAVIGAGAMGAGIAQVAARAGHQVLLYDIRAEALARAVAGIEKRLKSLVEKGKLTAEEAERTLKRLVPVTDLEALAD 84 (508)
T ss_pred CEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 10689964685210389999825984887228889999999999999888752377778888888731787789999860
Q ss_pred HCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHH---CCCCEECC-CCCCCCCCCCCCC
Q ss_conf 0577889999769906999999999720789989996798657899999999984---79943067-5467600035684
Q gi|254780716|r 65 AVCKPRKILMMVTDGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSE---KGIYFIGI-GVSGGVKGARSGA 140 (475)
Q Consensus 65 ~l~~pr~Iil~vp~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~---kgi~fid~-pVSGG~~gA~~G~ 140 (475)
+ +.+|=-+.--=.|+.-+..=+..+-+-|.||-.-||+.+-|--.+...+. .|.||.-. |+--=+
T Consensus 85 A----gLvIEAivE~L~VK~aLFaqLe~lc~ad~iiasNTSSlSIta~AAglarP~rvaGlHFFNPAP~MaLV------- 153 (508)
T TIGR02279 85 A----GLVIEAIVENLEVKKALFAQLEELCTADAIIASNTSSLSITALAAGLARPERVAGLHFFNPAPVMALV------- 153 (508)
T ss_pred C----CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEE-------
T ss_conf 2----73224677406777999998986367015256232577799999731387707511134865536215-------
Q ss_pred EEEEEC---CHHHHHHHHHHHHHHHC
Q ss_conf 378845---48999888999998750
Q gi|254780716|r 141 SLMVGG---NEKAYNRVENILLSISA 163 (475)
Q Consensus 141 slMvGG---~~~~~~~~~piL~~iaa 163 (475)
=.|+| +.++.+.+-..=.+=++
T Consensus 154 -EVVSGLaT~~eVae~ly~~a~aWGK 178 (508)
T TIGR02279 154 -EVVSGLATEAEVAEQLYETARAWGK 178 (508)
T ss_pred -EEECCCCCHHHHHHHHHHHHHHCCC
T ss_conf -6623635428999999999873288
No 126
>PRK07340 ornithine cyclodeaminase; Validated
Probab=97.50 E-value=0.0009 Score=47.36 Aligned_cols=162 Identities=12% Similarity=0.113 Sum_probs=98.7
Q ss_pred CEEEEEECCHHHHHHHHHHHH--CCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHH
Q ss_conf 805698157111688999997--898599973998999999971221127840328989998605778899997699069
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILD--KGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDP 81 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~--~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~ 81 (475)
..+++||.|..+...+.-+.. .--+|.+|+|++++.+.|.++........ ...+.++.+... ++|+++-++.++
T Consensus 126 ~~l~iiGaG~QA~~~~~a~~~v~~~~~V~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~e~av~~a---DiI~taT~S~~P 201 (304)
T PRK07340 126 RDLLLIGTGVQAAHHLEALAALLPVRRVWVRGRTAASAAAFCAAARALGPTL-EPLDGDAIPPAV---DVVVTVTTSRTP 201 (304)
T ss_pred CEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCE-EECCHHHHHHHC---CEEEEECCCCCC
T ss_conf 5179973479999999999985997489998799899999999986009917-976899998428---989994189976
Q ss_pred HHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHH
Q ss_conf 99999999720789989996798657899999999984799430675467600035684378845489998889999987
Q gi|254780716|r 82 VDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGVKGARSGASLMVGGNEKAYNRVENILLSI 161 (475)
Q Consensus 82 v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~~gA~~G~slMvGG~~~~~~~~~piL~~i 161 (475)
+- . ..+++|..|.-.|...| +.+++...+-.+.--|+|-.-. .-++.|..+..+.+.+....+-.++
T Consensus 202 v~---~---~~~~~g~hI~aiGs~~p-~~~Eld~~l~~~a~v~VD~~e~---~~~eaGeli~a~~~~~~~~eLg~v~--- 268 (304)
T PRK07340 202 VY---P---EAARAGRLVVGVGAFTP-DMAELAPRTVRGSALYVDDPAG---ARHEAGDLIQAGVDWSRVRSLADAL--- 268 (304)
T ss_pred CC---C---CCCCCCEEEECCCCCCC-CCEECCHHHHHCCEEEEECHHH---HHHHCHHHHHCCCCHHHHEEHHHHH---
T ss_conf 44---6---55799818941378999-8435699999419599907999---9986313875688510012599997---
Q ss_pred HCCCCCCCEEEEECCCCHHHH
Q ss_conf 501567861898569874678
Q gi|254780716|r 162 SAKYQNSPCCALLGPDGSGHF 182 (475)
Q Consensus 162 aak~~~~~cv~y~G~~GsGh~ 182 (475)
..+..+....+.+-..|.|..
T Consensus 269 ~g~~~~r~~~tvFksvG~a~~ 289 (304)
T PRK07340 269 RGTVPARGGPVLFKSVGCAAW 289 (304)
T ss_pred CCCCCCCCCCEEEECCCHHHH
T ss_conf 599889999889969885999
No 127
>PRK06407 ornithine cyclodeaminase; Provisional
Probab=97.49 E-value=0.0013 Score=46.15 Aligned_cols=115 Identities=17% Similarity=0.223 Sum_probs=78.6
Q ss_pred CEEEEEECCHHHHHHHHHHHH--CCCEEEEEECCHHHHHHHHHHCCC-CCCCCEECCCHHHHHHHCCCCCEEEEECCCHH
Q ss_conf 805698157111688999997--898599973998999999971221-12784032898999860577889999769906
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILD--KGFRLAVYNKDFELTDVFIKKISG-LSQKVIVTKNLEQMVEAVCKPRKILMMVTDGD 80 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~--~G~~V~vydr~~~~~~~l~~~~~~-~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~ 80 (475)
..+|+||.|..+...++-+.. .--+|.+|+|++++.++|.++... ..-.+.++.++++.+...+ +|+++-++..
T Consensus 119 ~~l~iiG~G~QA~~~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~~~~~v~~~~~~e~av~~aD---iI~taT~s~~ 195 (302)
T PRK06407 119 ENFTIIGSGFQAETQLEGMASVYNPKRIRVYSRNFDHARAFAERFSKEFGVDIRPVDNAEAALRDAD---TITSITNSDT 195 (302)
T ss_pred CEEEEEEEHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHCC---EEEEECCCCC
T ss_conf 7899996659999999999974077389998088899999999986440995799489999983499---9999418988
Q ss_pred HHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHH-HHHCCCCEECC
Q ss_conf 999999999720789989996798657899999999-98479943067
Q gi|254780716|r 81 PVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQ-LSEKGIYFIGI 127 (475)
Q Consensus 81 ~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~-l~~kgi~fid~ 127 (475)
++- . ...+++|..|.-.|...|. .+++... +....+.++|.
T Consensus 196 Pv~---~--~~~l~~g~hi~aiGa~~p~-~~Eld~~ll~~a~~vvvD~ 237 (302)
T PRK06407 196 PIF---N--RKYLGDEYHVNLAGSNYPN-RREAEHSVLNDADIVVTEH 237 (302)
T ss_pred CCC---C--HHHCCCCCEEEEECCCCCC-CCCCCHHHHHHCCEEEECC
T ss_conf 671---5--8887999489963799998-5307999996199999888
No 128
>PRK08291 ornithine cyclodeaminase; Validated
Probab=97.47 E-value=0.0011 Score=46.82 Aligned_cols=114 Identities=11% Similarity=0.161 Sum_probs=76.3
Q ss_pred CEEEEEECCHHHHHHHHHHHH--CCCEEEEEECCHHHHHHHHHHCCC-CCCCCEECCCHHHHHHHCCCCCEEEEECCCHH
Q ss_conf 805698157111688999997--898599973998999999971221-12784032898999860577889999769906
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILD--KGFRLAVYNKDFELTDVFIKKISG-LSQKVIVTKNLEQMVEAVCKPRKILMMVTDGD 80 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~--~G~~V~vydr~~~~~~~l~~~~~~-~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~ 80 (475)
..+|+||.|..+..-.+-|.. .=-+|.+|+|++++.+.|.++... .+-.+.++.++++.+...+ +|+++-++..
T Consensus 133 ~~l~iiG~G~QA~~~l~Al~~v~~i~~v~v~~r~~~~a~~f~~~~~~~~g~~v~~~~~~~~av~~aD---IIvtaT~s~~ 209 (330)
T PRK08291 133 SRVAVFGAGEQARLQLEALTLVRDIREVRVWARDAAKAEAFAAELRAALGIPVTVARDVHAALAGAD---IVVTTTPSEE 209 (330)
T ss_pred CEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEECCHHHHHHCCC---EEEEEECCCC
T ss_conf 5699987648899999999973897689998389899999999998976996699299999972288---8999768999
Q ss_pred HHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHH-HHHCCCCEEC
Q ss_conf 999999999720789989996798657899999999-9847994306
Q gi|254780716|r 81 PVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQ-LSEKGIYFIG 126 (475)
Q Consensus 81 ~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~-l~~kgi~fid 126 (475)
++- . ...++||..|+-.|...|. .++.... +......+.|
T Consensus 210 Pv~---~--~~~lkpG~hI~aiGs~~p~-~rEld~~~~~~a~~vv~D 250 (330)
T PRK08291 210 PIL---K--AEWLHPGLHVTAMGSDAEH-KNEIAPAVFAAADRYVCD 250 (330)
T ss_pred CCC---C--HHHCCCCCEEEEECCCCCC-CCCCCHHHHHCCCEEEEC
T ss_conf 501---5--1006998289970699987-452477777308799969
No 129
>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]
Probab=97.46 E-value=0.0014 Score=45.83 Aligned_cols=116 Identities=16% Similarity=0.203 Sum_probs=80.0
Q ss_pred CEEEEEECCHHHHHHHHHHHH--CCCEEEEEECCHHHHHHHHHHCCCCC-CCCEECCCHHHHHHHCCCCCEEEEECCCHH
Q ss_conf 805698157111688999997--89859997399899999997122112-784032898999860577889999769906
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILD--KGFRLAVYNKDFELTDVFIKKISGLS-QKVIVTKNLEQMVEAVCKPRKILMMVTDGD 80 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~--~G~~V~vydr~~~~~~~l~~~~~~~~-~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~ 80 (475)
+.+|+||.|.++.-...-+.. ..-++.+|+|+++..+++........ ..+..+.+.++.+...+ +|+++-|+.+
T Consensus 131 ~~laiIGaG~qA~~ql~a~~~v~~~~~I~i~~r~~~~~e~~a~~l~~~~~~~v~a~~s~~~av~~aD---iIvt~T~s~~ 207 (330)
T COG2423 131 STLAIIGAGAQARTQLEALKAVRDIREIRVYSRDPEAAEAFAARLRKRGGEAVGAADSAEEAVEGAD---IVVTATPSTE 207 (330)
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEECCCHHHHHHCCC---EEEEECCCCC
T ss_conf 5799988848999999999962896189997689899999999987633865132368998861399---8999428998
Q ss_pred HHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHH-HHHCCCCEECCC
Q ss_conf 999999999720789989996798657899999999-984799430675
Q gi|254780716|r 81 PVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQ-LSEKGIYFIGIG 128 (475)
Q Consensus 81 ~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~-l~~kgi~fid~p 128 (475)
++ + ....+++|.-|.-.|.-. ....+...+ +...+.-|+|-+
T Consensus 208 Pi---l--~~~~l~~G~hI~aiGad~-p~k~Eld~e~l~ra~~vvvD~~ 250 (330)
T COG2423 208 PV---L--KAEWLKPGTHINAIGADA-PGKRELDPEVLARADRVVVDSL 250 (330)
T ss_pred CE---E--CHHHCCCCCEEEECCCCC-CCCCCCCHHHHHHCCEEEECCH
T ss_conf 76---2--386658970897037899-6524278999985090997577
No 130
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=97.45 E-value=0.0064 Score=41.09 Aligned_cols=86 Identities=19% Similarity=0.266 Sum_probs=57.4
Q ss_pred EEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEE-CCCHHHHHH-HCCCCCEEEEECCCHHHH
Q ss_conf 056981571116889999978985999739989999999712211278403-289899986-057788999976990699
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIV-TKNLEQMVE-AVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~-~~s~~e~v~-~l~~pr~Iil~vp~g~~v 82 (475)
+|=++|.|.+|+.+|+.|...|++|.+-|+++++++.+....... .+.+ ..+++-+-+ .+++++.+ +.+++...+
T Consensus 2 ~IiI~GaG~vG~~La~~Ls~e~~dV~vID~d~~~~~~~~~~lDv~--~i~Gd~~~~~~L~~Agi~~ad~~-IAvT~~De~ 78 (455)
T PRK09496 2 KIIILGAGQVGGTLAERLVGENNDVTVIDTDEERLRRLQDRLDVR--TVVGNGSHPDVLREAGAEDADML-IAVTDSDET 78 (455)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCEE--EEEECCCCHHHHHHCCCCCCCEE-EEECCCHHH
T ss_conf 799999888999999999868997999989999999988625868--99966899999996599869999-995797189
Q ss_pred HHHHHHHHHCC
Q ss_conf 99999997207
Q gi|254780716|r 83 DQLIDKLKPLL 93 (475)
Q Consensus 83 ~~vi~~l~~~l 93 (475)
.-+.-.+...+
T Consensus 79 Nli~~~lAk~l 89 (455)
T PRK09496 79 NMVACQIAKSL 89 (455)
T ss_pred HHHHHHHHHHH
T ss_conf 99999999986
No 131
>PRK13303 L-aspartate dehydrogenase; Provisional
Probab=97.43 E-value=0.0053 Score=41.65 Aligned_cols=171 Identities=13% Similarity=0.193 Sum_probs=96.1
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCC-CE---EEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEEC
Q ss_conf 99880569815711168899999789-85---999739989999999712211278403289899986057788999976
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKG-FR---LAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMV 76 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G-~~---V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~v 76 (475)
|.+ ||+||.|.||+.+|..|.+.. .. |.+++++.+..+.... ..+..+.+++++. ++|++|+=|-
T Consensus 1 Mmr--VgiiG~GaIG~~va~~l~~~~~~~~~~v~~~~~~~~~~~~~~~------~~~~~~~~~~~L~---~~~DlVVE~A 69 (265)
T PRK13303 1 MMK--VAMIGFGAIAAAVYELLEHDPRLRVDWVIVPEHSVDAVRRALG------RAVQVVSSVDALA---QRPDLVVECA 69 (265)
T ss_pred CCE--EEEECCCHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHC------CCCCCCCCHHHHH---HCCCEEEECC
T ss_conf 929--9998546899999999844997279999946852677875304------5886447988982---3799999898
Q ss_pred CCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHH---HHHHHHHHHHCCC-CEECCCCCCCCC---CCCCC-C-EE-EEEC
Q ss_conf 990699999999972078998999679865789---9999999984799-430675467600---03568-4-37-8845
Q gi|254780716|r 77 TDGDPVDQLIDKLKPLLSPEDILLDGGNSHFCD---TQIRSLQLSEKGI-YFIGIGVSGGVK---GARSG-A-SL-MVGG 146 (475)
Q Consensus 77 p~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~---t~~~~~~l~~kgi-~fid~pVSGG~~---gA~~G-~-sl-MvGG 146 (475)
+. +++.+....++ +.|.-++-+|..-..| -.++.+.+++.|- -|+-.|=-||-. .|+.| . .+ +.+-
T Consensus 70 ~~-~av~~~~~~~L---~~g~dl~v~SvgALaD~~~~~~l~~~A~~~~~~i~ipsGAigGlD~l~aa~~~~i~~V~~~t~ 145 (265)
T PRK13303 70 GH-AALKEHVVPIL---KAGIDCAVASVGALADEALRERLEQAAEAGGARLHLLSGAIGGIDALAAAKEGGLDEVRYTGR 145 (265)
T ss_pred CH-HHHHHHHHHHH---HCCCCEEEECCHHHCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEEE
T ss_conf 88-99999999999---729988998815857988999999999868975997262344067999987189738999986
Q ss_pred -CHHHHHHHHHHHHHHHCCCCCCCEEEEECCC--CHHHHHHHHH
Q ss_conf -4899988899999875015678618985698--7467898877
Q gi|254780716|r 147 -NEKAYNRVENILLSISAKYQNSPCCALLGPD--GSGHFVKMIH 187 (475)
Q Consensus 147 -~~~~~~~~~piL~~iaak~~~~~cv~y~G~~--GsGh~vKMVh 187 (475)
++..|... |..+.+--....+|-+.|-|+. ..-+|=|=+|
T Consensus 146 K~P~~l~~~-~~e~~~~l~~~~~~~~~F~G~area~~~fP~NvN 188 (265)
T PRK13303 146 KPPKSWRGS-PAEQLCDLDALTEPTVIFEGSAREAARLFPKNAN 188 (265)
T ss_pred ECHHHHCCC-HHHHCCCCCCCCCCEEEEECCHHHHHHHCCCHHH
T ss_conf 085786667-1543156103777769973189999987786176
No 132
>pfam02254 TrkA_N TrkA-N domain. This domain is found in a wide variety of proteins. These protein include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD.
Probab=97.43 E-value=0.0051 Score=41.83 Aligned_cols=110 Identities=18% Similarity=0.218 Sum_probs=70.7
Q ss_pred EEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEE-CCCHHHHHH-HCCCCCEEEEECCCHHHHH
Q ss_conf 56981571116889999978985999739989999999712211278403-289899986-0577889999769906999
Q gi|254780716|r 6 IGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIV-TKNLEQMVE-AVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 6 IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~-~~s~~e~v~-~l~~pr~Iil~vp~g~~v~ 83 (475)
|-++|+|.+|..+|+.|.+.| +|.+.|+++++++++.+.+.. -+.+ +.+.+-+-. .+++.+.++.+.++...-.
T Consensus 1 viI~G~g~~G~~la~~L~~~~-~v~vId~d~~~~~~~~~~~~~---vi~GD~~~~~~L~~a~i~~a~~vi~~~~~d~~n~ 76 (115)
T pfam02254 1 IIIIGYGRVGRSLAEELREGG-PVVVIDKDPERVEELREEGVP---VVVGDATDEEVLEEAGIEDADAVVAATGDDEANI 76 (115)
T ss_pred CEEECCCHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHCCCE---EEEEECCCHHHHHHHCCCCCCEEEEECCCHHHHH
T ss_conf 999878889999999998089-999999987998778866986---9999568866787619202879999629849999
Q ss_pred HHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEE
Q ss_conf 999999720789989996798657899999999984799430
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFI 125 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fi 125 (475)
.+...+........|+.-..+ ....+.+++.|+..+
T Consensus 77 ~~~~~~r~~~~~~~iiar~~~------~~~~~~l~~~Gad~v 112 (115)
T pfam02254 77 LIVLLARELNPAKKIIARAND------PEHAELLRRLGADEV 112 (115)
T ss_pred HHHHHHHHHCCCCEEEEEECC------HHHHHHHHHCCCCEE
T ss_conf 999999997899809999878------999999997698999
No 133
>pfam01262 AlaDh_PNT_C Alanine dehydrogenase/PNT, C-terminal domain. This family now also contains the lysine 2-oxoglutarate reductases.
Probab=97.40 E-value=0.0013 Score=46.16 Aligned_cols=100 Identities=14% Similarity=0.201 Sum_probs=75.7
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEEC--CCHHH
Q ss_conf 8056981571116889999978985999739989999999712211278403289899986057788999976--99069
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMV--TDGDP 81 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~v--p~g~~ 81 (475)
.++=|||.|+-|.+-++-...-|-+|.++|+++++.+++...+...... ....+.+.+.+.+...++|+..+ |...+
T Consensus 21 a~vvViG~Gv~G~~A~~~A~~lGa~V~v~D~~~~~l~~~~~~~~~~v~~-~~~~~~~~l~~~i~~aDvvIgavl~pg~~a 99 (150)
T pfam01262 21 AKVVVIGGGVVGLGAAATAKGLGAPVTILDVRPERLEQLDSLFAEFVET-DIFSNCEYLAEAIAEADLVIGTVLIPGARA 99 (150)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCC-HHHCCHHHHHHHHHHCCEEEEEEECCCCCC
T ss_conf 7799989878999999999867998999729999999999864762001-665379999999743879997203178869
Q ss_pred HHHHHHHHHHCCCCCCEEEECCC
Q ss_conf 99999999720789989996798
Q gi|254780716|r 82 VDQLIDKLKPLLSPEDILLDGGN 104 (475)
Q Consensus 82 v~~vi~~l~~~l~~g~iiID~st 104 (475)
-.-|.++.+..++||.+|||.+-
T Consensus 100 P~lIt~~mv~~MkpGsVIVDvai 122 (150)
T pfam01262 100 PKLVTREMVKTMKPGSVIVDVAI 122 (150)
T ss_pred CCEECHHHHHHHCCCCEEEEEEC
T ss_conf 92207999984479939999620
No 134
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=97.39 E-value=0.0033 Score=43.21 Aligned_cols=116 Identities=21% Similarity=0.288 Sum_probs=76.2
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 80569815711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
.+|.+-|+|+.|+..|+.|.+.|..|++.|.++.+.....+... .... +.+++.. ..+++++-|-..+....
T Consensus 29 k~VaIqG~GnVG~~~A~~l~~~Gakvvv~d~~~~~~~~~~~~~~-----~~~~-~~~~~~~--~~~DIl~PcA~~~~i~~ 100 (200)
T cd01075 29 KTVAVQGLGKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFG-----ATVV-APEEIYS--VDADVFAPCALGGVIND 100 (200)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCC-----CEEE-CCHHHHC--CCCCEEEECCCCCCCCH
T ss_conf 99999898799999999999679979998268899999985689-----8893-7332322--77768865141154689
Q ss_pred HHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCC--CCCC
Q ss_conf 9999997207899899967986578999999999847994306754--6760
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGV--SGGV 133 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pV--SGG~ 133 (475)
+. .+.+ +-.+|+.+.|.. -.+....+.+.++||.|+=--+ +||+
T Consensus 101 ~~----a~~i-~ak~I~e~AN~p-~t~~~~~~~L~~rgI~~iPD~laNaGGV 146 (200)
T cd01075 101 DT----IPQL-KAKAIAGAANNQ-LADPRHGQMLHERGILYAPDYVVNAGGL 146 (200)
T ss_pred HH----HHHC-CCCEEEECCCCC-CCCHHHHHHHHHCCEEEECHHHEECCCH
T ss_conf 99----9870-896997356799-9997899999859929968244207354
No 135
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=97.35 E-value=0.015 Score=38.26 Aligned_cols=117 Identities=15% Similarity=0.183 Sum_probs=85.5
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHH--HHCCCCCEEEEECCCHHH
Q ss_conf 805698157111688999997898599973998999999971221127840328989998--605778899997699069
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMV--EAVCKPRKILMMVTDGDP 81 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v--~~l~~pr~Iil~vp~g~~ 81 (475)
.+|=++|.|+.|+.+++.|.++|+++.+-|.+++.++...+.|... ..+=.+-.|+. ...++.|.+++++++.+.
T Consensus 400 ~~VII~G~GRvGq~var~L~~~gi~~vviD~d~~~V~~~r~~G~~v---~yGDat~~~vL~~AGi~~Ar~vViaidd~~~ 476 (615)
T PRK03562 400 PRVIIAGFGRFGQIVGRLLLSSGVKMVVLDHDPDHIETLRKFGMKV---FYGDATRMDLLESAGAAKAEVLINAIDDPQT 476 (615)
T ss_pred CCEEEEECCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCEE---EEECCCCHHHHHHCCCCCCCEEEEEECCHHH
T ss_conf 9989990280469999999978998799979999999999679908---9768999999986791406889999498999
Q ss_pred HHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCC
Q ss_conf 999999997207899899967986578999999999847994306754
Q gi|254780716|r 82 VDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGV 129 (475)
Q Consensus 82 v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pV 129 (475)
...++.-+-..-..=.|+.-.-+ ++...++.+.|+..+=...
T Consensus 477 ~~~iv~~~r~~~P~l~IiaRard------~~~~~~L~~~Ga~~vv~Et 518 (615)
T PRK03562 477 NLQLTELVKEHFPHLQIIARARD------VDHYIRLRQAGVEKPERET 518 (615)
T ss_pred HHHHHHHHHHHCCCCEEEEEECC------HHHHHHHHHCCCCEEECCH
T ss_conf 99999999975899869998397------7889999978999896665
No 136
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=97.34 E-value=0.018 Score=37.76 Aligned_cols=117 Identities=15% Similarity=0.260 Sum_probs=85.2
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEE-CCCHHHH-HHHCCCCCEEEEECCCHHH
Q ss_conf 8056981571116889999978985999739989999999712211278403-2898999-8605778899997699069
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIV-TKNLEQM-VEAVCKPRKILMMVTDGDP 81 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~-~~s~~e~-v~~l~~pr~Iil~vp~g~~ 81 (475)
.+|=++|.|..|+.+++.|.++|+++.+-|.|++.++.+.+.|... ..+ +.+++=+ ....+++|.+++++++.+.
T Consensus 401 ~~VII~G~GR~Gq~var~L~~~gi~~vviD~d~~~V~~~r~~G~~v---~yGDat~~~vL~~AGi~~A~~vViai~d~~~ 477 (602)
T PRK03659 401 PQVIIVGFGRFGQVIGRLLMANKMRITVLERDISAVNLMRKYGYKV---YYGDATQLELLRAAGAEKAEAIVITCNEPED 477 (602)
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCEE---EEECCCCHHHHHHCCCCCCCEEEEEECCHHH
T ss_conf 9989978875689999999978999899978679999999789908---9758999999986790405889998298999
Q ss_pred HHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCC
Q ss_conf 999999997207899899967986578999999999847994306754
Q gi|254780716|r 82 VDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGV 129 (475)
Q Consensus 82 v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pV 129 (475)
...+++.+...-..=.|++-.-+ ++...++.+.|+..+=...
T Consensus 478 ~~~iv~~~r~~~P~l~I~aRar~------~~~~~~L~~~Ga~~vv~Et 519 (602)
T PRK03659 478 TMKLVELCQQHFPHLHILARARG------RVEAHELLQAGVTQFSRET 519 (602)
T ss_pred HHHHHHHHHHHCCCCEEEEEECC------HHHHHHHHHCCCCEEECCH
T ss_conf 99999999987869969998697------8999999978999786627
No 137
>KOG2304 consensus
Probab=97.31 E-value=0.0036 Score=42.94 Aligned_cols=198 Identities=17% Similarity=0.241 Sum_probs=103.4
Q ss_pred CCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCC----CC--CCCEECCCHHHHHHH-CCC---CCEE
Q ss_conf 8805698157111688999997898599973998999999971221----12--784032898999860-577---8899
Q gi|254780716|r 3 QADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISG----LS--QKVIVTKNLEQMVEA-VCK---PRKI 72 (475)
Q Consensus 3 k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~----~~--~~~~~~~s~~e~v~~-l~~---pr~I 72 (475)
..+|++||-|.||+++|.--+..|++|.++|++.++..+..+.-+. .. +........+||++. +++ .--+
T Consensus 11 ~~~V~ivGaG~MGSGIAQv~a~sg~~V~l~d~~~~aL~~A~~~I~~sl~rvakKk~~~~~~~~~e~v~~~l~ri~~~tnv 90 (298)
T KOG2304 11 IKNVAIVGAGQMGSGIAQVAATSGLNVWLVDANEDALSRATKAISSSLKRVAKKKKADDPVALEEFVDDTLDRIKTSTNV 90 (298)
T ss_pred CCCEEEECCCCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCH
T ss_conf 66247875664320399998851994698547778999999999999999986213677156788999999999871777
Q ss_pred EEECC-CHHHHHHHHH------HHH---HCCCCCCEEEECCCCCHHHHHHHHH---HHHHCCCCEECC-CCCCCCCCCCC
Q ss_conf 99769-9069999999------997---2078998999679865789999999---998479943067-54676000356
Q gi|254780716|r 73 LMMVT-DGDPVDQLID------KLK---PLLSPEDILLDGGNSHFCDTQIRSL---QLSEKGIYFIGI-GVSGGVKGARS 138 (475)
Q Consensus 73 il~vp-~g~~v~~vi~------~l~---~~l~~g~iiID~sts~~~~t~~~~~---~l~~kgi~fid~-pVSGG~~gA~~ 138 (475)
=..+. ++-+++.+++ +|. ....+.+.++-.-||+..-+.-... .-.=.|.||... ||--=.+--+.
T Consensus 91 ~~~v~dadliiEAivEn~diK~~lF~~l~~~ak~~~il~tNTSSl~lt~ia~~~~~~srf~GlHFfNPvPvMKLvEVir~ 170 (298)
T KOG2304 91 SDAVSDADLIIEAIVENLDIKRKLFKDLDKIAKSSTILATNTSSLSLTDIASATQRPSRFAGLHFFNPVPVMKLVEVIRT 170 (298)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEHHHHHHHCCCHHHHCEEECCCCCHHHHHHHHHCC
T ss_conf 77642367999999874778999999998446656288625652459987763258345011113587106778666447
Q ss_pred CCEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Q ss_conf 84378845489998889999987501567861898569874678988776787888999899999999642899789999
Q gi|254780716|r 139 GASLMVGGNEKAYNRVENILLSISAKYQNSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKNPLEISH 218 (475)
Q Consensus 139 G~slMvGG~~~~~~~~~piL~~iaak~~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~~i~~ 218 (475)
.. -++++|+.+..+=+++.... .+-+.-.| -|.|-+ .|--+-|++.++.++ .-+-++|-.
T Consensus 171 ~~-----TS~eTf~~l~~f~k~~gKtt-------VackDtpG----FIVNRl---LiPyl~ea~r~yerG-dAskeDIDt 230 (298)
T KOG2304 171 DD-----TSDETFNALVDFGKAVGKTT-------VACKDTPG----FIVNRL---LIPYLMEAIRMYERG-DASKEDIDT 230 (298)
T ss_pred CC-----CCHHHHHHHHHHHHHHCCCC-------EEECCCCC----HHHHHH---HHHHHHHHHHHHHHC-CCCHHHHHH
T ss_conf 88-----88899999999999857770-------32058874----114577---899999999999816-770766889
Q ss_pred HH
Q ss_conf 99
Q gi|254780716|r 219 LF 220 (475)
Q Consensus 219 vf 220 (475)
-+
T Consensus 231 aM 232 (298)
T KOG2304 231 AM 232 (298)
T ss_pred HH
T ss_conf 98
No 138
>pfam00389 2-Hacid_dh D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain. This family represents the largest portion of the catalytic domain of 2-hydroxyacid dehydrogenases as the NAD binding domain is inserted within the structural domain.
Probab=97.29 E-value=0.0026 Score=43.94 Aligned_cols=84 Identities=14% Similarity=0.145 Sum_probs=47.3
Q ss_pred CHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCC
Q ss_conf 98999860577889999769906999999999720789989996798657899999999984799430675467600035
Q gi|254780716|r 58 NLEQMVEAVCKPRKILMMVTDGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGVKGAR 137 (475)
Q Consensus 58 s~~e~v~~l~~pr~Iil~vp~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~~gA~ 137 (475)
+.+|+++.++..+.+++.... +...++++.+ |.| ++|.-.| ..+. .... +.++++||...-+|-.....-|+
T Consensus 29 ~~eel~~~~~~~d~li~~~~~-~i~~e~l~~~-~~L---K~I~~~~-~G~D-~ID~-~~a~~~gI~V~n~p~~~~~aVAE 100 (313)
T pfam00389 29 LTEELLEAAKDADALIVRSTT-PVTAEVLEAA-PGL---KVIARRG-VGVD-NIDL-DAATERGILVTNVPGYSTESVAE 100 (313)
T ss_pred CHHHHHHHHCCCCEEEECCCC-CCCHHHHHCC-CCC---EEEEECC-CCCC-HHHH-HHHHHCCCEEEECCCCCCHHHHH
T ss_conf 989999983898299985899-7689999449-998---4999888-4455-3059-99997999999899877289999
Q ss_pred CCCEEEEECCHH
Q ss_conf 684378845489
Q gi|254780716|r 138 SGASLMVGGNEK 149 (475)
Q Consensus 138 ~G~slMvGG~~~ 149 (475)
...++|..=.+.
T Consensus 101 ~~i~l~L~l~R~ 112 (313)
T pfam00389 101 LTVGLILALARR 112 (313)
T ss_pred HHHHHHHHHHCC
T ss_conf 999999997123
No 139
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.28 E-value=0.0097 Score=39.75 Aligned_cols=114 Identities=16% Similarity=0.185 Sum_probs=67.1
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEE--CCCHHH
Q ss_conf 805698157111688999997898599973998999999971221127840328989998605778899997--699069
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMM--VTDGDP 81 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~--vp~g~~ 81 (475)
.+|+++|+|.=|.+.|+-|.+.|++|.++|.++....++.+.+... +...... +.+...+.|+.+ ||...+
T Consensus 13 k~V~V~GlG~sG~a~a~~L~~~G~~v~~~D~~~~~~~~~~~~~~~~---~~~~~~~----~~~~~~d~vV~SPGI~~~~p 85 (487)
T PRK03369 13 APVLVAGAGVTGRAVLAALTRFGARPTVCDDDPDALRPHAERGVAT---VSSSDAV----QQIADYALVVTSPGFPPTAP 85 (487)
T ss_pred CEEEEEEECHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCE---ECCCCCH----HHHCCCCEEEECCCCCCCCH
T ss_conf 9899991568389999999978697999989825779998659948---6376226----56467788998995799899
Q ss_pred -HHHHHH---------HHHHCC-------CCCC-EEEECCCCCHHHHHHHHHHHHHCCCCE
Q ss_conf -999999---------997207-------8998-999679865789999999998479943
Q gi|254780716|r 82 -VDQLID---------KLKPLL-------SPED-ILLDGGNSHFCDTQIRSLQLSEKGIYF 124 (475)
Q Consensus 82 -v~~vi~---------~l~~~l-------~~g~-iiID~sts~~~~t~~~~~~l~~kgi~f 124 (475)
+....+ +|.-.+ .+.. |-|-+||---..|.-.+..|+..|..-
T Consensus 86 ~l~~a~~~gi~i~~eieL~~~~~~~~~~~~~~~~IaVTGTnGKTTttsli~~iL~~~g~~~ 146 (487)
T PRK03369 86 VLAAAAAAGVPIWGDVELAWRLDAAGCYGPPRRWLVVTGTNGKTTTTSMLHAMLRAAGRRS 146 (487)
T ss_pred HHHHHHHCCCCEEEHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCE
T ss_conf 9999998899076599999998744433676655999798872789999999998589985
No 140
>PRK07589 ornithine cyclodeaminase; Validated
Probab=97.24 E-value=0.0019 Score=44.99 Aligned_cols=116 Identities=12% Similarity=0.187 Sum_probs=75.3
Q ss_pred CEEEEEECCHHHHHHHHHHHH--CCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHH
Q ss_conf 805698157111688999997--898599973998999999971221127840328989998605778899997699069
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILD--KGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDP 81 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~--~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~ 81 (475)
..+|+||-|......+.-+.. .--+|.+|||++++.++|.++-...+-.+..+.+++|.+...+ +|.++-+ .+.
T Consensus 130 ~~l~iIGtG~QA~~Q~~A~~~vr~i~~V~v~~r~~~~a~~~a~~l~~~g~~v~~~~s~~eAv~~AD---IIvTaT~-s~~ 205 (346)
T PRK07589 130 RTMALIGNGAQSEFQALAFKALLGIEEIRLYDIDPAATAKLARNLAGPGLRIVRCRSVAEAVEGAD---IITTVTA-DKA 205 (346)
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHCCC---EEEEECC-CCC
T ss_conf 769997470889999999998589868999828879999999998726980899499999972198---8887114-778
Q ss_pred HHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEEC
Q ss_conf 999999997207899899967986578999999999847994306
Q gi|254780716|r 82 VDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIG 126 (475)
Q Consensus 82 v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid 126 (475)
..-++.+ ..++||.-|--.|.-.|. .+++...+-.+.--|+|
T Consensus 206 ~~Pil~~--~~v~pGtHInaVGad~Pg-k~ELd~~ll~rA~V~VD 247 (346)
T PRK07589 206 NATILTP--DMIEPGMHINAVGGDCPG-KTELHADILRRARVFVE 247 (346)
T ss_pred CCCCCCH--HHCCCCCEEEEECCCCCC-CCCCCHHHHHHCCEECC
T ss_conf 8860238--775999579852799998-53079999951977417
No 141
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=97.23 E-value=0.0023 Score=44.39 Aligned_cols=123 Identities=17% Similarity=0.245 Sum_probs=75.1
Q ss_pred EEEEEECCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHCCC-CC-CCCEECCCHHHHHHHCCCCCEEEEECCCHHH
Q ss_conf 05698157111688999997898-599973998999999971221-12-7840328989998605778899997699069
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGF-RLAVYNKDFELTDVFIKKISG-LS-QKVIVTKNLEQMVEAVCKPRKILMMVTDGDP 81 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~-~V~vydr~~~~~~~l~~~~~~-~~-~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~ 81 (475)
+|.+||+|-.|..+|.+|+..|. ++.++|.+.=....+..+.-. .. -+..-+...++....+. |.+-+...+..-.
T Consensus 1 kVlivG~GglG~~va~~L~~~Gv~~i~ivD~D~v~~~Nl~Rq~~~~~~dvG~~Ka~~a~~~l~~~n-p~v~i~~~~~~~~ 79 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELN-PGVNVTAVPEGIS 79 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHC-CCCEEEEEECCCC
T ss_conf 999999798999999999993797199997898750014642258988949224899999998568-9838999945689
Q ss_pred HHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCC
Q ss_conf 9999999972078998999679865789999999998479943067546760
Q gi|254780716|r 82 VDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGV 133 (475)
Q Consensus 82 v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~ 133 (475)
++.. ...+++-|++||+... +.......+.+.+.++-|+++++.|..
T Consensus 80 -~~~~---~~~~~~~dvvi~~~D~-~~~r~~l~~~~~~~~ip~i~~~~~g~~ 126 (143)
T cd01483 80 -EDNL---DDFLDGVDLVIDAIDN-IAVRRALNRACKELGIPVIDAGGLGLG 126 (143)
T ss_pred -HHHH---HHHHCCCCEEEECCCC-HHHHHHHHHHHHHCCCCEEEEECCCCE
T ss_conf -6469---9997599999987799-999999999999869988996366768
No 142
>COG4091 Predicted homoserine dehydrogenase [Amino acid transport and metabolism]
Probab=97.23 E-value=0.018 Score=37.77 Aligned_cols=118 Identities=17% Similarity=0.275 Sum_probs=74.7
Q ss_pred EEEEEECCHHHHHHHHHHHH-CCCEE-EEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 05698157111688999997-89859-99739989999999712211278403289899986057788999976990699
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILD-KGFRL-AVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~-~G~~V-~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
.||+||-|.||..|+..+++ .|++| .+-||+.+++++..+........+....+.....++++.-++.++ ++ .
T Consensus 19 RVGlIGAG~mG~~ivtQi~~m~Gm~vvaisd~~~~~ak~A~~~ag~~~~~~~e~~~~s~~a~Ai~aGKi~vT---~D--~ 93 (438)
T COG4091 19 RVGLIGAGEMGTGIVTQIASMPGMEVVAISDRNLDAAKRAYDRAGGPKIEAVEADDASKMADAIEAGKIAVT---DD--A 93 (438)
T ss_pred EEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEE---CC--H
T ss_conf 998754541106799987506883699984246427889998735872000011116678899862867982---65--3
Q ss_pred HHHHHHHHHCCCCCCEEEECCCCCHHHHHHHH--HHHHHCCCCEE--CCCCCCCC
Q ss_conf 99999997207899899967986578999999--99984799430--67546760
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDGGNSHFCDTQIRS--LQLSEKGIYFI--GIGVSGGV 133 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~--~~l~~kgi~fi--d~pVSGG~ 133 (475)
+ ++-....-|+|||.+ ..|.---+.. ..+..|-+-++ ++-|.=||
T Consensus 94 ~-----~i~~~~~IdvIIdAT-G~p~vGA~~~l~Ai~h~KHlVMmNVEaDvtIGp 142 (438)
T COG4091 94 E-----LIIANDLIDVIIDAT-GVPEVGAKIALEAILHGKHLVMMNVEADVTIGP 142 (438)
T ss_pred H-----HHHCCCCCEEEEECC-CCCCHHHHHHHHHHHCCCEEEEEEEEECEEECH
T ss_conf 5-----432388604999767-885301475799985677289997540325348
No 143
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=97.22 E-value=0.0018 Score=45.10 Aligned_cols=118 Identities=14% Similarity=0.195 Sum_probs=77.0
Q ss_pred CCEEEEEECCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHH
Q ss_conf 8805698157111688999997898-599973998999999971221127840328989998605778899997699069
Q gi|254780716|r 3 QADIGIIGLGSMGSNLSLNILDKGF-RLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDP 81 (475)
Q Consensus 3 k~~IGiIGLG~MG~~mA~nL~~~G~-~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~ 81 (475)
..+|-++|-|-.+++++.-|.+.|. +++++||++++.+.+.+.......... . .+....+..+++|+=+.|.|-.
T Consensus 19 ~k~vlIlGaGGaarai~~aL~~~g~~~I~i~nR~~~r~~~l~~~~~~~~~~~~-~---~~~~~~~~~~dliIN~tp~G~~ 94 (155)
T cd01065 19 GKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIA-Y---LDLEELLAEADLIINTTPVGMK 94 (155)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCEE-E---CCHHHHHCCCCEEEECCCCCCC
T ss_conf 99999986758999999999971998228860899999999998501366401-0---4534431568879876778777
Q ss_pred HHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEEC
Q ss_conf 999999997207899899967986578999999999847994306
Q gi|254780716|r 82 VDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIG 126 (475)
Q Consensus 82 v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid 126 (475)
-..-..--...+.++.+++|.--.. ..| ...+.++++|..+++
T Consensus 95 ~~~~~p~~~~~~~~~~~~~D~iY~P-~~T-~ll~~a~~~g~~~i~ 137 (155)
T cd01065 95 PGDELPLPPSLLKPGGVVYDVVYNP-LET-PLLKEARALGAKTID 137 (155)
T ss_pred CCCCCCCCHHHCCCCCEEEECCCCC-CCC-HHHHHHHHCCCEEEC
T ss_conf 8776767887759986898653178-788-999999998395877
No 144
>PRK08643 acetoin reductase; Validated
Probab=97.19 E-value=0.0077 Score=40.47 Aligned_cols=85 Identities=15% Similarity=0.317 Sum_probs=64.6
Q ss_pred CCCCEEEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCC
Q ss_conf 998805698--157111688999997898599973998999999971221127840328989998605778899997699
Q gi|254780716|r 1 MKQADIGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTD 78 (475)
Q Consensus 1 M~k~~IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~ 78 (475)
|+| +.+| |-+-||..+|+.|++.|++|.+.|++.++.+++.++......+.. .+-.-+.+
T Consensus 1 mnK--valVTGg~~GIG~aia~~la~~Ga~V~i~d~~~~~~~~~~~~~~~~~~~~~----------------~~~~Dvt~ 62 (256)
T PRK08643 1 MSK--VALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAKAAADKLSSDGGKAI----------------AVKADVSN 62 (256)
T ss_pred CCC--EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEE----------------EEECCCCC
T ss_conf 984--999957578899999999998799999996988999999999985399099----------------99805899
Q ss_pred HHHHHHHHHHHHHCCCCCCEEEECC
Q ss_conf 0699999999972078998999679
Q gi|254780716|r 79 GDPVDQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 79 g~~v~~vi~~l~~~l~~g~iiID~s 103 (475)
.+.++..++.......+=|++|...
T Consensus 63 ~~~v~~~~~~~~~~~G~iDiLVNnA 87 (256)
T PRK08643 63 RDQVFDAVQQVVDTFGDLNVVVNNA 87 (256)
T ss_pred HHHHHHHHHHHHHHHCCCCEEEECC
T ss_conf 9999999999999829987999899
No 145
>PRK05472 redox-sensing transcriptional repressor Rex; Provisional
Probab=97.17 E-value=0.0007 Score=48.15 Aligned_cols=81 Identities=20% Similarity=0.371 Sum_probs=56.9
Q ss_pred CEEEEEECCHHHHHHHH--HHHHCCCEE-EEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHH
Q ss_conf 80569815711168899--999789859-997399899999997122112784032898999860577889999769906
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSL--NILDKGFRL-AVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGD 80 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~--nL~~~G~~V-~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~ 80 (475)
.++.+||.|++|++++. .+.+.||++ .+||.+|+++-.-+ .+-.+...+++++++... ..++-+++||+.
T Consensus 85 ~~v~lvGaGnLG~AL~~y~gf~~~gf~Iva~FD~dp~kiG~~i-----~gi~V~~i~~L~~~i~~~-~i~iaIiaVP~~- 157 (211)
T PRK05472 85 TNVALVGAGNLGRALLNYNGFKKRGFKIVAAFDVDPEKVGTKI-----GGIPVYHIDELEEVIKEN-DIEIAILTVPAE- 157 (211)
T ss_pred CEEEEECCCHHHHHHHHCCCHHHCCCEEEEEECCCHHHCCCEE-----CCEEEECHHHHHHHHHHH-CCCEEEEECCHH-
T ss_conf 5089988877999998487623189789999748978859883-----883873499999999981-993899955768-
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999972
Q gi|254780716|r 81 PVDQLIDKLKP 91 (475)
Q Consensus 81 ~v~~vi~~l~~ 91 (475)
+..+|.+.|..
T Consensus 158 ~AQ~vad~Lv~ 168 (211)
T PRK05472 158 AAQEVADRLVE 168 (211)
T ss_pred HHHHHHHHHHH
T ss_conf 89999999998
No 146
>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.17 E-value=0.01 Score=39.66 Aligned_cols=115 Identities=14% Similarity=0.204 Sum_probs=66.3
Q ss_pred CCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHH-H----HHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEE--
Q ss_conf 88056981571116889999978985999739989-9----9999971221127840328989998605778899997--
Q gi|254780716|r 3 QADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFE-L----TDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMM-- 75 (475)
Q Consensus 3 k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~-~----~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~-- 75 (475)
..+|+|+|+|.=|.+.|+-|.+.|++|.+||.... . ++.+.+.+- .+..-... .+.++..++|+.+
T Consensus 14 ~kkv~i~GlG~sG~a~a~~L~~~g~~v~~~D~~~~~~~~~~~~~l~~~gi----~~~~g~~~---~~~~~~~d~vv~SPg 86 (458)
T PRK01710 14 NKKVAVVGIGVSNIPLIKFLVKLGAKVTAFDKKSEEELGEISLELKEKGV----NLELGENY---LDKLTGFDVIFKTPS 86 (458)
T ss_pred CCEEEEEEECHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCC----EEEECCCH---HHHCCCCCEEEECCC
T ss_conf 99699997878899999999978897999989884314899999985799----89957840---542378888998998
Q ss_pred CC-CHHHHHHHHH---------HHHHCCCCCCEE-EECCCCCHHHHHHHHHHHHHCCCCE
Q ss_conf 69-9069999999---------997207899899-9679865789999999998479943
Q gi|254780716|r 76 VT-DGDPVDQLID---------KLKPLLSPEDIL-LDGGNSHFCDTQIRSLQLSEKGIYF 124 (475)
Q Consensus 76 vp-~g~~v~~vi~---------~l~~~l~~g~ii-ID~sts~~~~t~~~~~~l~~kgi~f 124 (475)
+| +.+.+....+ ++.-.+.++.+| |-+||---..|.-++..|+..|..-
T Consensus 87 I~~~~p~~~~a~~~gi~v~~e~el~~~~~~~~~IaVTGTnGKTTTtsmi~~iL~~~g~~~ 146 (458)
T PRK01710 87 MRIDSPELVKAKEEGAYITSEMEEFIKYCPAKVFGITGSDGKTTTTTLIYEMLKEEGYKT 146 (458)
T ss_pred CCCCCHHHHHHHHCCCCEECHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCE
T ss_conf 799899999999879937409999986375877999368984789999999999849975
No 147
>PRK05225 ketol-acid reductoisomerase; Validated
Probab=97.16 E-value=0.0028 Score=43.69 Aligned_cols=89 Identities=18% Similarity=0.299 Sum_probs=64.3
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHH---HHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHH
Q ss_conf 8056981571116889999978985999739989---9999997122112784032898999860577889999769906
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFE---LTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGD 80 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~---~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~ 80 (475)
.+|.+||.|.-|.+-|+||.+.|.+|++-=|..+ +.+.+.+. ...++ .+.+++|++.. .++|+...|+ +
T Consensus 38 KkI~IiG~GsQG~aqaLNlRDSGldV~~~LR~~si~~k~~Sw~~A---~~~Gf-~V~t~eeai~~---ADvV~~LtPD-~ 109 (489)
T PRK05225 38 KKIVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKA---TENGF-KVGTYEELIPQ---ADLVVNLTPD-K 109 (489)
T ss_pred CEEEEECCCHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHH---HHCCC-CCCCHHHHHHC---CCEEEEECCC-C
T ss_conf 859998036587776524410588569995553033416679999---97799-64678997323---5878870885-5
Q ss_pred HHHHHHHHHHHCCCCCCEEE
Q ss_conf 99999999972078998999
Q gi|254780716|r 81 PVDQLIDKLKPLLSPEDILL 100 (475)
Q Consensus 81 ~v~~vi~~l~~~l~~g~iiI 100 (475)
+-..|++.+.|++++|.++.
T Consensus 110 q~~~v~~~i~p~mk~g~~L~ 129 (489)
T PRK05225 110 QHSDVVRAVQPLMKQGAALG 129 (489)
T ss_pred CHHHHHHHHHHHHCCCCEEE
T ss_conf 14899999987612677211
No 148
>pfam00899 ThiF ThiF family. This family contains a repeated domain in ubiquitin activating enzyme E1 and members of the bacterial ThiF/MoeB/HesA family.
Probab=97.16 E-value=0.0049 Score=41.95 Aligned_cols=124 Identities=18% Similarity=0.224 Sum_probs=75.1
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHCC-CCC-CCCEECCCHHHHHHHCCCCCEEEEECCCHH
Q ss_conf 805698157111688999997898-59997399899999997122-112-784032898999860577889999769906
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGF-RLAVYNKDFELTDVFIKKIS-GLS-QKVIVTKNLEQMVEAVCKPRKILMMVTDGD 80 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~-~V~vydr~~~~~~~l~~~~~-~~~-~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~ 80 (475)
++|.+||+|-.|..+|.+|++.|. ++.+.|.+.=....+..+.- ... -+-.-+...++.+..+. |.+-+...+..
T Consensus 2 skVlivG~GglG~~~~~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n-p~~~i~~~~~~- 79 (134)
T pfam00899 2 SRVLVVGAGGLGSPAAEYLARAGVGKLTLVDFDTVELSNLNRQILFTESDIGKPKAEVAKERLRAIN-PDVEVEAYPER- 79 (134)
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEECCHHHCCCEEHHHHHHHHHHHC-CCCEEEEEECC-
T ss_conf 8899989888999999999993897499998956763222722423364668810799999999778-99589999256-
Q ss_pred HHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCC
Q ss_conf 99999999972078998999679865789999999998479943067546760
Q gi|254780716|r 81 PVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGV 133 (475)
Q Consensus 81 ~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~ 133 (475)
...+ .+...++.-|+|||+.- ++..-....+.|.+.++-|+.+++.|-.
T Consensus 80 i~~~---~~~~~~~~~DvVi~~~D-n~~~r~~ln~~c~~~~ip~i~~~~~g~~ 128 (134)
T pfam00899 80 LTPE---NLEELLKGADLVVDALD-NFAARYLLNDACVKRGIPLISAGALGFD 128 (134)
T ss_pred CCHH---HHHHCCCCCCEEEECCC-CHHHHHHHHHHHHHCCCCEEEEECCCCE
T ss_conf 7977---87642644889999989-9999999999999859989995546788
No 149
>PRK06199 ornithine cyclodeaminase; Validated
Probab=97.12 E-value=0.0023 Score=44.34 Aligned_cols=95 Identities=16% Similarity=0.281 Sum_probs=62.3
Q ss_pred CEEEEEECCHHHHHHHHHHHHC--C-CEEEEEECCHHHHHHHHHHCCCC---CCCCEECCCHHHHHHHCCCCCEEEEECC
Q ss_conf 8056981571116889999978--9-85999739989999999712211---2784032898999860577889999769
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDK--G-FRLAVYNKDFELTDVFIKKISGL---SQKVIVTKNLEQMVEAVCKPRKILMMVT 77 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~--G-~~V~vydr~~~~~~~l~~~~~~~---~~~~~~~~s~~e~v~~l~~pr~Iil~vp 77 (475)
..+|+||.|.++..-.+-+... . -+|.+|||++++++.|+++.... ...+..+.++++.+...+ +|+++-.
T Consensus 156 ~~lgiIG~G~qAr~~l~Al~~vrp~i~~V~V~~r~~~~a~~fa~~~~~~~~~~~~v~~~~s~eeav~~aD---IVvtaTs 232 (379)
T PRK06199 156 KVVGLVGPGVMGKTIVAAFMAVCPGIDTIKIKGRSQKSLDAFATWVAETYPQITEVVVVDSEEEVVRGSD---IVTYCTS 232 (379)
T ss_pred CEEEEECCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCC---EEEECCC
T ss_conf 7899989639999999999986178888999889999999999999976688850898299999973799---9997777
Q ss_pred CHH---HHHHHHHHHHHCCCCCCEEEECC
Q ss_conf 906---99999999972078998999679
Q gi|254780716|r 78 DGD---PVDQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 78 ~g~---~v~~vi~~l~~~l~~g~iiID~s 103 (475)
... ...-++. ...++||..|+-.|
T Consensus 233 ~~~~~ps~~P~~~--~~wlkpGahv~~~g 259 (379)
T PRK06199 233 GEAGDPSAYPYVK--REWVKPGAFLLMPA 259 (379)
T ss_pred CCCCCCCCCCEEC--HHHCCCCCEEECCC
T ss_conf 8877777784745--99959998894556
No 150
>PRK06046 alanine dehydrogenase; Validated
Probab=97.12 E-value=0.005 Score=41.88 Aligned_cols=114 Identities=17% Similarity=0.223 Sum_probs=77.0
Q ss_pred CEEEEEECCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHCCCC-CCCCEECCCHHHHHHHCCCCCEEEEECCCHH
Q ss_conf 8056981571116889999978--985999739989999999712211-2784032898999860577889999769906
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDK--GFRLAVYNKDFELTDVFIKKISGL-SQKVIVTKNLEQMVEAVCKPRKILMMVTDGD 80 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~--G~~V~vydr~~~~~~~l~~~~~~~-~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~ 80 (475)
..+|+||.|.++...++-+..- =-+|.+|||++++.++|.++.... .-.+..+.++++.++ .++|+++-++.+
T Consensus 130 ~~l~iiG~G~Qa~~~~~al~~v~~i~~i~v~~r~~~~~~~fa~~~~~~~~~~v~~~~~~~~~~~----aDiI~taT~s~~ 205 (326)
T PRK06046 130 KVIGIIGAGNQARTQLEALSRVFDLEEVRVYDRTKESCEKFISEMSDFVPCEIVYEEDVEEACD----CDILVTTTPSRK 205 (326)
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEECCCHHHHHC----CCEEEEEECCCC
T ss_conf 5589965708899999999973897789999189999999999998655986597399999827----999999828998
Q ss_pred HHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECC
Q ss_conf 99999999972078998999679865789999999998479943067
Q gi|254780716|r 81 PVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGI 127 (475)
Q Consensus 81 ~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~ 127 (475)
++ ++ ...++||..|+-.|...|. .+++...+-.+.--|+|-
T Consensus 206 P~---~~--~~~l~pG~hi~~iG~~~p~-~~Eld~~~l~~a~v~vD~ 246 (326)
T PRK06046 206 PV---VK--ADWVKEGTHINAIGADAPG-KQELDPELLKRAKVFVDD 246 (326)
T ss_pred CE---EC--CCCCCCCCEEEECCCCCCC-HHCCCHHHHHCCCEEEEC
T ss_conf 45---14--4335787177412689866-100799999509889956
No 151
>PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional
Probab=97.11 E-value=0.033 Score=35.83 Aligned_cols=111 Identities=14% Similarity=0.230 Sum_probs=69.4
Q ss_pred EEEEEECCHHHH-HHHHHHHHCCCEEEEEECCHHH-HHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEE--CCCH-
Q ss_conf 056981571116-8899999789859997399899-9999971221127840328989998605778899997--6990-
Q gi|254780716|r 5 DIGIIGLGSMGS-NLSLNILDKGFRLAVYNKDFEL-TDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMM--VTDG- 79 (475)
Q Consensus 5 ~IGiIGLG~MG~-~mA~nL~~~G~~V~vydr~~~~-~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~--vp~g- 79 (475)
+|=|||+|-.|- ++|+-|.++|++|+++|+.... ++.+.+.|-.... + .+++ .++.++.|+.+ +|..
T Consensus 10 ~ih~iGigG~GmsalA~~l~~~G~~V~gsD~~~~~~~~~L~~~Gi~v~~---g-~~~~----~l~~~d~vV~Sp~I~~~~ 81 (459)
T PRK00421 10 RIHFVGIGGIGMSGLAEVLLNLGYKVSGSDLKESAVTQRLLELGAIIFI---G-HDAE----NIKGADVVVVSSAIKPDN 81 (459)
T ss_pred EEEEEEECHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCEEEC---C-CCHH----HCCCCCEEEECCCCCCCC
T ss_conf 8999986688899999999968993999889899789999978799977---9-8979----879999999899859989
Q ss_pred HHHHHHHH---------HHH-HCCCCCC-EEEECCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 69999999---------997-2078998-99967986578999999999847994
Q gi|254780716|r 80 DPVDQLID---------KLK-PLLSPED-ILLDGGNSHFCDTQIRSLQLSEKGIY 123 (475)
Q Consensus 80 ~~v~~vi~---------~l~-~~l~~g~-iiID~sts~~~~t~~~~~~l~~kgi~ 123 (475)
+.+....+ +++ ..++... |-|-+||---..|.-.+..++..|..
T Consensus 82 p~~~~a~~~gi~v~~~~e~l~~~~~~~~~IaVtGTnGKTTtT~ll~~il~~~g~~ 136 (459)
T PRK00421 82 PELVAARELGIPVVRRAEMLAELMRLRTSIAVAGTHGKTTTTSLLAHVLAEAGLD 136 (459)
T ss_pred HHHHHHHHCCCCEEEHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCC
T ss_conf 9999999879979889999999982596499977888611899999999976998
No 152
>PRK01390 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.08 E-value=0.0096 Score=39.79 Aligned_cols=116 Identities=15% Similarity=0.152 Sum_probs=65.7
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEE--CCCHHH
Q ss_conf 805698157111688999997898599973998999999971221127840328989998605778899997--699069
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMM--VTDGDP 81 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~--vp~g~~ 81 (475)
.+|.|+|+|.-|.+.|+-|.+.|++|.+||.+++...++.+++-.. .++.+. .....+.|+.+ +|...+
T Consensus 10 k~v~v~GlG~sG~s~a~~L~~~G~~V~~~D~~~~~~~~~~~~g~~~-------~~~~~~--~~~~~~~iV~SPGIp~~~p 80 (457)
T PRK01390 10 KTVALFGLGGSGLATARALKAGGAEVIAWDDNPDSVAKAAAAGIAT-------ADLRTA--DWSQFAALVLSPGVPLTHP 80 (457)
T ss_pred CEEEEEEECHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCC-------CCCCCC--CCCCCCEEEECCCCCCCCC
T ss_conf 9899994369999999999978997999939920668998759831-------455412--3203878999998886566
Q ss_pred -----HHHHHH---------HHH-----HCCCCCCEE-EECCCCCHHHHHHHHHHHHHCCCCEECCC
Q ss_conf -----999999---------997-----207899899-96798657899999999984799430675
Q gi|254780716|r 82 -----VDQLID---------KLK-----PLLSPEDIL-LDGGNSHFCDTQIRSLQLSEKGIYFIGIG 128 (475)
Q Consensus 82 -----v~~vi~---------~l~-----~~l~~g~ii-ID~sts~~~~t~~~~~~l~~kgi~fid~p 128 (475)
+...-+ +|. .......+| |-+||---..|.-.+..|+..|....-+|
T Consensus 81 ~~~~~v~~a~~~gi~v~seielf~~~~~~~~~~~~iIaVTGTnGKTTTtsli~~iL~~~g~~~~~gG 147 (457)
T PRK01390 81 KPHWTVDLARAAGVEVIGDIELFCRERRAHAPDAPFIAITGTNGKSTTTALIAHLLRQAGRDVQMGG 147 (457)
T ss_pred CCHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 7319999999859918600899999987325789889992899649899999999997399869966
No 153
>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]
Probab=97.08 E-value=0.016 Score=38.12 Aligned_cols=111 Identities=17% Similarity=0.274 Sum_probs=65.8
Q ss_pred EEEEEECCHHHHHHHHHHHHC--CCE-EEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHH
Q ss_conf 056981571116889999978--985-99973998999999971221127840328989998605778899997699069
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDK--GFR-LAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDP 81 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~--G~~-V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~ 81 (475)
+||+||.|..|..+..-+.+. .++ +.+|||+.++++++.+-.. ...+.++.|++ +.+++++-+- +.++
T Consensus 2 ~vgiVGcGaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~~~~~~~~-----~~~~s~ide~~---~~~DlvVEaA-S~~A 72 (255)
T COG1712 2 KVGIVGCGAIGKFLLELVRDGRVDFELVAVYDRDEEKAKELEASVG-----RRCVSDIDELI---AEVDLVVEAA-SPEA 72 (255)
T ss_pred EEEEEECCHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHCC-----CCCCCCHHHHH---HCCCEEEEEC-CHHH
T ss_conf 5789823378899999986688643699994488788888886038-----87635677773---0244254307-8899
Q ss_pred HHHHHHHHHHCCCCCCEEEECCCCCHH--HHHHHHHHHHHCCCCEECC
Q ss_conf 999999997207899899967986578--9999999998479943067
Q gi|254780716|r 82 VDQLIDKLKPLLSPEDILLDGGNSHFC--DTQIRSLQLSEKGIYFIGI 127 (475)
Q Consensus 82 v~~vi~~l~~~l~~g~iiID~sts~~~--~t~~~~~~l~~kgi~fid~ 127 (475)
|.+...++ |+.|.-+|-+|+.-.. .-..+-..+.+.+-..+-.
T Consensus 73 v~e~~~~~---L~~g~d~iV~SVGALad~~l~erl~~lak~~~~rv~~ 117 (255)
T COG1712 73 VREYVPKI---LKAGIDVIVMSVGALADEGLRERLRELAKCGGARVYL 117 (255)
T ss_pred HHHHHHHH---HHCCCCEEEEECHHCCCHHHHHHHHHHHHCCCCEEEE
T ss_conf 99986999---9659988999512206867999999998538947993
No 154
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=97.07 E-value=0.0023 Score=44.28 Aligned_cols=128 Identities=14% Similarity=0.200 Sum_probs=78.9
Q ss_pred CCCEEEEEECCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHCC--CC--CCCCEECCCHHHHHHHCCCCCEEEEEC
Q ss_conf 98805698157111688999997898-59997399899999997122--11--278403289899986057788999976
Q gi|254780716|r 2 KQADIGIIGLGSMGSNLSLNILDKGF-RLAVYNKDFELTDVFIKKIS--GL--SQKVIVTKNLEQMVEAVCKPRKILMMV 76 (475)
Q Consensus 2 ~k~~IGiIGLG~MG~~mA~nL~~~G~-~V~vydr~~~~~~~l~~~~~--~~--~~~~~~~~s~~e~v~~l~~pr~Iil~v 76 (475)
.+++|-+||+|-.|.+.+.+|+..|. ++.+.|.+.-...++..+.- .. .-+-.-+....+.+..+. |.+-+..+
T Consensus 18 ~~s~VlVvG~GGLG~~v~~~La~aGVg~i~ivD~D~Ve~sNL~RQ~l~~~~~~diG~~Ka~~a~~~l~~lN-p~v~i~~~ 96 (198)
T cd01485 18 RSAKVLIIGAGALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELN-PNVKLSIV 96 (198)
T ss_pred HHCCEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHC-CCCEEEEE
T ss_conf 70989998778899999999997499869999599635335775750265411168729999999999779-99779998
Q ss_pred CCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCC
Q ss_conf 990699999999972078998999679865789999999998479943067546760
Q gi|254780716|r 77 TDGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGV 133 (475)
Q Consensus 77 p~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~ 133 (475)
... +....+.....++.-|+|||++- ++..-....+.|.+.++-|+.+.+.|-.
T Consensus 97 ~~~--~~~~~~n~~~~~~~~DlVvd~~d-n~~~r~~in~~c~~~~iPlI~ga~~G~~ 150 (198)
T cd01485 97 EED--SLSNDSNIEEYLQKFTLVIATEE-NYERTAKVNDVCRKHHIPFISCATYGLI 150 (198)
T ss_pred ECC--CCCCHHHHHHHHHCCCEEEECCC-CHHHHHHHHHHHHHHCCCEEEEECCCCE
T ss_conf 224--45778689999848999999999-9999999999999929988999745668
No 155
>PRK08328 hypothetical protein; Provisional
Probab=97.05 E-value=0.0026 Score=44.01 Aligned_cols=125 Identities=14% Similarity=0.230 Sum_probs=75.0
Q ss_pred CCCEEEEEECCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHCC----CCCCCCEECCCHHHHHHHCCCCCEEEEEC
Q ss_conf 98805698157111688999997898-59997399899999997122----11278403289899986057788999976
Q gi|254780716|r 2 KQADIGIIGLGSMGSNLSLNILDKGF-RLAVYNKDFELTDVFIKKIS----GLSQKVIVTKNLEQMVEAVCKPRKILMMV 76 (475)
Q Consensus 2 ~k~~IGiIGLG~MG~~mA~nL~~~G~-~V~vydr~~~~~~~l~~~~~----~~~~~~~~~~s~~e~v~~l~~pr~Iil~v 76 (475)
++++|.+||+|-.|.+.|.+|+..|. ++.+.|.+.-....+..+-- ..+.. ..+...++-...++ |.+-+..+
T Consensus 26 ~~s~VlvvG~GGlGs~~~~~La~~GvG~i~lvD~D~ve~SNLnRQil~~~~diG~~-~K~~~a~~~l~~iN-p~v~i~~~ 103 (230)
T PRK08328 26 KKAKVAVVGVGGLGSPVAYYLAAAGVGTVLLIDEQTPELSNLNRQILHWEEDVGKN-PKPISAKWKLERFN-SDIKIETF 103 (230)
T ss_pred HCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCEEECCCCHHHHHCCHHHHCCC-CHHHHHHHHHHHHC-CCEEEEHH
T ss_conf 55978998878789999999998489868987487875156325540308774771-03999999999759-95057526
Q ss_pred CCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCC
Q ss_conf 990699999999972078998999679865789999999998479943067546760
Q gi|254780716|r 77 TDGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGV 133 (475)
Q Consensus 77 p~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~ 133 (475)
+. .... +.+...++.-|+||||+-. +..-.-..+.|.++++-|+.++++|..
T Consensus 104 ~~-~i~~---~n~~~ll~~~DlViD~tDn-~~tr~~ln~~c~~~~iPlI~g~v~g~~ 155 (230)
T PRK08328 104 VG-RLTE---ENIDEVLKGVDVIVDCLDN-FETRYLLDDYAHKKGIPLVHGAVEGMY 155 (230)
T ss_pred HH-HHHH---HHHHHHHCCCCEEEECCCC-HHHHHHHHHHHHHCCCCEEEEEEECCE
T ss_conf 64-4237---7798620059899998899-899999999999839977999966179
No 156
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.05 E-value=0.023 Score=36.97 Aligned_cols=115 Identities=15% Similarity=0.165 Sum_probs=66.5
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCH----HHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEE--CC
Q ss_conf 805698157111688999997898599973998----999999971221127840328989998605778899997--69
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDF----ELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMM--VT 77 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~----~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~--vp 77 (475)
.+|.|+|+|.-|.+.|+-|.++|++|.++|..+ ...+.+.+++.. +..-..+.+... +..++|+.+ +|
T Consensus 10 k~i~viGlG~sG~s~a~~L~~~G~~V~~~D~~~~~~~~~~~~l~~~gi~----~~~g~~~~~~~~--~~~d~vV~SPgI~ 83 (450)
T PRK02472 10 KKVLVLGLAKSGYAAAKLLHKLGANVTVNDGKPFSENPAAQELLEEGIK----VICGSHPLELLD--ENFDLMVKNPGIP 83 (450)
T ss_pred CEEEEEEECHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCE----EEECCCHHHHCC--CCCCEEEECCCCC
T ss_conf 9899997789999999999988698999848866579899999967998----997888078605--7887999899879
Q ss_pred CHHH-HHHHHH---------HHHHCCCCCCEEEECCCCC-HHHHHHHHHHHHHCCCCE
Q ss_conf 9069-999999---------9972078998999679865-789999999998479943
Q gi|254780716|r 78 DGDP-VDQLID---------KLKPLLSPEDILLDGGNSH-FCDTQIRSLQLSEKGIYF 124 (475)
Q Consensus 78 ~g~~-v~~vi~---------~l~~~l~~g~iiID~sts~-~~~t~~~~~~l~~kgi~f 124 (475)
...+ +....+ +|.-.+.+..+|--+||.. -..|.-.+..|+..|..-
T Consensus 84 ~~~p~~~~a~~~~i~v~~~~el~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~~g~~~ 141 (450)
T PRK02472 84 YDNPMVEEALEKGIPIITEVELAYLISEAPIIGITGSNGKTTTTTLIAEMLNAGGQHG 141 (450)
T ss_pred CCCHHHHHHHHCCCCEEEHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCE
T ss_conf 9999999999869967438788887515978998279997319999999999749973
No 157
>PRK07454 short chain dehydrogenase; Provisional
Probab=97.04 E-value=0.018 Score=37.76 Aligned_cols=87 Identities=13% Similarity=0.263 Sum_probs=63.7
Q ss_pred CCCCEEEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCC
Q ss_conf 998805698--157111688999997898599973998999999971221127840328989998605778899997699
Q gi|254780716|r 1 MKQADIGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTD 78 (475)
Q Consensus 1 M~k~~IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~ 78 (475)
|++.++.+| +-+-+|..+|+.|+++|++|.+.+|+.++.+++.++......++ ..+-.-|.+
T Consensus 3 ~~~mKvalITGas~GIG~a~A~~la~~G~~V~l~~R~~~~l~~~~~e~~~~g~~~----------------~~~~~Dvt~ 66 (241)
T PRK07454 3 LNSMPTALITGASRGIGKATALAFAKAGWDLALVARSQDALEALAEELRSTGVKV----------------AAYSIDLSN 66 (241)
T ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCE----------------EEEEEECCC
T ss_conf 8999889991758789999999999879989999899999999999999659928----------------999951899
Q ss_pred HHHHHHHHHHHHHCCCCCCEEEECC
Q ss_conf 0699999999972078998999679
Q gi|254780716|r 79 GDPVDQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 79 g~~v~~vi~~l~~~l~~g~iiID~s 103 (475)
.+.+++.++.+......=|++|...
T Consensus 67 ~~~v~~~~~~~~~~~G~iDiLVnNA 91 (241)
T PRK07454 67 PEAIAPGIAELLEQFGCPSVLINNA 91 (241)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEECC
T ss_conf 9999999999999759988999889
No 158
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=96.98 E-value=0.0057 Score=41.45 Aligned_cols=124 Identities=17% Similarity=0.212 Sum_probs=78.3
Q ss_pred CCCEEEEEECCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHCCCCCCC--CEECCCHHHHHHHCCCCCEEEEECCC
Q ss_conf 98805698157111688999997898-5999739989999999712211278--40328989998605778899997699
Q gi|254780716|r 2 KQADIGIIGLGSMGSNLSLNILDKGF-RLAVYNKDFELTDVFIKKISGLSQK--VIVTKNLEQMVEAVCKPRKILMMVTD 78 (475)
Q Consensus 2 ~k~~IGiIGLG~MG~~mA~nL~~~G~-~V~vydr~~~~~~~l~~~~~~~~~~--~~~~~s~~e~v~~l~~pr~Iil~vp~ 78 (475)
.+++|-+||+|-.|.+.|.||+..|. ++.+.|.+.-...++..+.--..+. ..-+...++.+..+. |.+-+...+.
T Consensus 20 ~~s~VlvvG~GGLG~~v~~~La~aGvg~i~ivD~d~v~~snL~RQ~l~~~~diG~~Ka~~a~~~l~~lN-p~v~i~~~~~ 98 (197)
T cd01492 20 RSARILLIGLKGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALN-PRVKVSVDTD 98 (197)
T ss_pred HCCCEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHCCCCEECCCCCCCCCHHHHHHHHHHHHC-CCCEEEEEEC
T ss_conf 609599988788999999999983798699998991877773978603233478885999999999738-9972898704
Q ss_pred HHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCC
Q ss_conf 069999999997207899899967986578999999999847994306754676
Q gi|254780716|r 79 GDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGG 132 (475)
Q Consensus 79 g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG 132 (475)
.+.+.-. ..++.-|+|||++ -+++.-....+.|.+.|+-|+.+.+.|-
T Consensus 99 --~~~~~~~---~~i~~~D~Vvd~~-dn~~~r~~iN~~c~~~~iplI~g~~~g~ 146 (197)
T cd01492 99 --DISEKPE---EFFSQFDVVVATE-LSRAELVKINELCRKLGVKFYATGVHGL 146 (197)
T ss_pred --CCCHHHH---HHHHCCCEEEECC-CCHHHHHHHHHHHHHCCCCEEEEEECCC
T ss_conf --5857689---9982899999999-9999999999999981997899981375
No 159
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=96.98 E-value=0.013 Score=38.78 Aligned_cols=105 Identities=13% Similarity=0.203 Sum_probs=63.0
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHH---HCCC---CCCCCEECCCHHHHHHHCCCCCEEE
Q ss_conf 998805698157111688999997898-59997399899999997---1221---1278403289899986057788999
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGF-RLAVYNKDFELTDVFIK---KISG---LSQKVIVTKNLEQMVEAVCKPRKIL 73 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~-~V~vydr~~~~~~~l~~---~~~~---~~~~~~~~~s~~e~v~~l~~pr~Ii 73 (475)
|++.+|++||.|..|..+|.-+...+. ++..||+++++++.-.. ++.. ....+.+..+.++ +...++|+
T Consensus 5 ~~~~KV~IIGaG~VG~~~A~~l~~~~l~eivLiDi~~~~a~g~a~Dl~h~~~~~~~~~~v~~~~dy~~----~~~aDiVV 80 (322)
T PTZ00082 5 IPRKKISLIGSGNIGGVMAYLIQLKNLADVVLFDIVPNIPAGKALDIMHANVMAGSNCKVIGTNSYDD----IAGSDVVI 80 (322)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCEEEECCCHHH----HCCCCEEE
T ss_conf 17982999896989999999996389977999978898008899987663644688857983799999----77999999
Q ss_pred EECC--------------------CHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHH
Q ss_conf 9769--------------------90699999999972078998999679865789999
Q gi|254780716|r 74 MMVT--------------------DGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQI 112 (475)
Q Consensus 74 l~vp--------------------~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~ 112 (475)
+..- +.+.+.++...+..+- |+.++|-.+ +|-|..-
T Consensus 81 itAG~~~kpg~t~~~~~R~dLl~~Na~I~~~i~~~i~~~~-p~aiiivvs--NPvDv~t 136 (322)
T PTZ00082 81 VTAGLAKAPGKSDDEWNRDDLLPLNAKIMIEVGENIKKYC-PNAFVIVIT--NPLDVMV 136 (322)
T ss_pred ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC-CCCEEEECC--CCHHHHH
T ss_conf 8988877899987656788999988999999999987409-983599748--9269999
No 160
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=96.96 E-value=0.011 Score=39.42 Aligned_cols=11 Identities=36% Similarity=0.652 Sum_probs=5.2
Q ss_pred EEEECCCCHHH
Q ss_conf 89856987467
Q gi|254780716|r 171 CALLGPDGSGH 181 (475)
Q Consensus 171 v~y~G~~GsGh 181 (475)
+.-+|.+|++.
T Consensus 125 vlIlGaGGaar 135 (275)
T PRK00258 125 ILLLGAGGAAR 135 (275)
T ss_pred EEEECCCCHHH
T ss_conf 99988871079
No 161
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.96 E-value=0.044 Score=34.91 Aligned_cols=103 Identities=20% Similarity=0.263 Sum_probs=63.4
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHH---CCCC--CCCCEECCCHHHHHHHCCCCCEEEEEC
Q ss_conf 805698157111688999997898--599973998999999971---2211--278403289899986057788999976
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGF--RLAVYNKDFELTDVFIKK---ISGL--SQKVIVTKNLEQMVEAVCKPRKILMMV 76 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~--~V~vydr~~~~~~~l~~~---~~~~--~~~~~~~~s~~e~v~~l~~pr~Iil~v 76 (475)
.+|++||.|..|..+|..|+.+|. ++..||+++++++..... .... ...+....+.+++ ...++|++..
T Consensus 4 ~Kv~IIGaG~VG~~~A~~l~~~~l~~el~L~Di~~~~a~g~a~Dl~h~~~~~~~~~v~~~~d~~~~----~~aDvVVitA 79 (312)
T cd05293 4 NKVTVVGVGQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDYSVT----ANSKVVIVTA 79 (312)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCHHHH----CCCCEEEECC
T ss_conf 869998978889999999996699887999938898332688886604012798559937999996----8999999889
Q ss_pred CC---------------HHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHH
Q ss_conf 99---------------06999999999720789989996798657899999
Q gi|254780716|r 77 TD---------------GDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIR 113 (475)
Q Consensus 77 p~---------------g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~ 113 (475)
-. .+.+.++...+..+. +..++|-. ++|-|+...
T Consensus 80 G~~~k~g~~R~dLl~~N~~I~~~i~~~i~~~~-p~~ivivv--sNPvDv~t~ 128 (312)
T cd05293 80 GARQNEGESRLDLVQRNVDIFKGIIPKLVKYS-PNAILLVV--SNPVDIMTY 128 (312)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC-CCCEEEEC--CCCHHHHHH
T ss_conf 99999898889999988999999999988419-98469966--891899999
No 162
>PRK00683 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.95 E-value=0.022 Score=37.18 Aligned_cols=122 Identities=16% Similarity=0.205 Sum_probs=69.3
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEE--CCC
Q ss_conf 998805698157111688999997898599973998999999971221127840328989998605778899997--699
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMM--VTD 78 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~--vp~ 78 (475)
|-..+|.++|+|.=|.+.|+-|.++|..|.++|.+.+..+....... ......+++.+. .+.|+.+ +|.
T Consensus 1 ~~~KkvlV~GlG~SG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~~~------~~~~~~~~~~~~---~d~vv~SPGi~~ 71 (418)
T PRK00683 1 MGLQRVVVLGLGVTGKSVARFLAQKGVYVIGVDNSLEALQSCPYIHE------RYLEGAEEFPEQ---VDLVVRSPGIKP 71 (418)
T ss_pred CCCCEEEEEEECHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCHHHH------HCCCCHHHCCCC---CCEEEECCCCCC
T ss_conf 99866999808887999999999782989998298145454614555------405623324234---989998998599
Q ss_pred HHH-HHHHHH-------H--HH---HCCCCCC-EEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCC
Q ss_conf 069-999999-------9--97---2078998-9996798657899999999984799430675467
Q gi|254780716|r 79 GDP-VDQLID-------K--LK---PLLSPED-ILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSG 131 (475)
Q Consensus 79 g~~-v~~vi~-------~--l~---~~l~~g~-iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSG 131 (475)
..+ +..... + |. +.+.+.. |-|-+||.--..|.-.+..+++.|..-.-+|=-|
T Consensus 72 ~~p~~~~a~~~~i~i~seiel~~~~~~~~~~~~IaITGTNGKTTTt~ll~~iL~~~g~~~~~~GNIG 138 (418)
T PRK00683 72 YHPWVEAAVALKIPVVTDIQLAFQTPEFQRYPSLGITGSTGKTTTILFLEHLLRTLGIPAFAMGNIG 138 (418)
T ss_pred CCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHHHHCCCCCEEEECCC
T ss_conf 8899999998699754079999742441479879997689866099999999986799818880346
No 163
>COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane]
Probab=96.95 E-value=0.013 Score=38.72 Aligned_cols=126 Identities=16% Similarity=0.150 Sum_probs=72.5
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEEC-CCHHHHHHHCCCCCEEEEE--CCC-H
Q ss_conf 80569815711168899999789859997399899999997122112784032-8989998605778899997--699-0
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVT-KNLEQMVEAVCKPRKILMM--VTD-G 79 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~-~s~~e~v~~l~~pr~Iil~--vp~-g 79 (475)
.+|.++|||.=|..+|+.|.+.|..|.++|..+.. +..... ....+++... -+..+ ......++|+.+ +|- .
T Consensus 8 ~kv~V~GLG~sG~a~a~~L~~~G~~v~v~D~~~~~-~~~~~~-~~~~~~i~~~~g~~~~--~~~~~~d~vV~SPGi~~~~ 83 (448)
T COG0771 8 KKVLVLGLGKSGLAAARFLLKLGAEVTVSDDRPAP-EGLAAQ-PLLLEGIEVELGSHDD--EDLAEFDLVVKSPGIPPTH 83 (448)
T ss_pred CEEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCC-CCHHHH-HHHCCCCEEECCCCCH--HCCCCCCEEEECCCCCCCC
T ss_conf 97999926651099999999779869998389876-532344-4420372231376411--0013477899899999988
Q ss_pred HHHHHHHH---------HHHHCC--CCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCC
Q ss_conf 69999999---------997207--8998999679865789999999998479943067546760
Q gi|254780716|r 80 DPVDQLID---------KLKPLL--SPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGV 133 (475)
Q Consensus 80 ~~v~~vi~---------~l~~~l--~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~ 133 (475)
+.+.+... +|.-.. ++--|-|-+||---..|.-++..+++.|....-+|=.|.+
T Consensus 84 p~v~~A~~~gi~i~~dieL~~r~~~~~p~vaITGTNGKTTTTsli~~~l~~~G~~~~lgGNIG~p 148 (448)
T COG0771 84 PLVEAAKAAGIEIIGDIELFYRLSGEAPIVAITGTNGKTTTTSLIAHLLKAAGLDALLGGNIGTP 148 (448)
T ss_pred HHHHHHHHCCCCEEEHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEECCCCCCC
T ss_conf 89999998699377488889874489998999799962889999999998559983213516713
No 164
>KOG0068 consensus
Probab=96.94 E-value=0.011 Score=39.25 Aligned_cols=105 Identities=17% Similarity=0.226 Sum_probs=79.8
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 80569815711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
.++|++|+|..|+..|+++-.-|..|..||.-....+ ..+ .++ -.-+++|. +.+.+.|-+-+|..+.++
T Consensus 147 KTLgvlG~GrIGseVA~r~k~~gm~vI~~dpi~~~~~-~~a------~gv-q~vsl~Ei---l~~ADFitlH~PLtP~T~ 215 (406)
T KOG0068 147 KTLGVLGLGRIGSEVAVRAKAMGMHVIGYDPITPMAL-AEA------FGV-QLVSLEEI---LPKADFITLHVPLTPSTE 215 (406)
T ss_pred CEEEEEECCCCHHHHHHHHHHCCCEEEEECCCCCHHH-HHH------CCC-EEEEHHHH---HHHCCEEEECCCCCCCHH
T ss_conf 6788850462118999999865854886068784677-875------165-45409887---755688998167882143
Q ss_pred HHH-HHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 999-999720789989996798657899999999984
Q gi|254780716|r 84 QLI-DKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSE 119 (475)
Q Consensus 84 ~vi-~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~ 119 (475)
..+ ++.+..+++|--||.++-...-|...+-+.+++
T Consensus 216 ~lin~~tfA~mKkGVriIN~aRGGvVDe~ALv~Al~s 252 (406)
T KOG0068 216 KLLNDETFAKMKKGVRIINVARGGVVDEPALVRALDS 252 (406)
T ss_pred HCCCHHHHHHHHCCCEEEEECCCCEECHHHHHHHHHC
T ss_conf 1138789998607858998247752063999988852
No 165
>pfam02629 CoA_binding CoA binding domain. This domain has a Rossmann fold and is found in a number of proteins including succinyl CoA synthetases, malate and ATP-citrate ligases.
Probab=96.93 E-value=0.0066 Score=40.99 Aligned_cols=80 Identities=15% Similarity=0.246 Sum_probs=60.0
Q ss_pred CCEEEEEECCHHHHHHHHHHHH-CCCEE-EEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHH
Q ss_conf 8805698157111688999997-89859-997399899999997122112784032898999860577889999769906
Q gi|254780716|r 3 QADIGIIGLGSMGSNLSLNILD-KGFRL-AVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGD 80 (475)
Q Consensus 3 k~~IGiIGLG~MG~~mA~nL~~-~G~~V-~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~ 80 (475)
..++.+||.|+.|..++.|.-+ .||.+ .+||.+|++.- ..-.++..+.+++++++.. .+++.+++||+.
T Consensus 3 ~~~v~liG~g~lG~al~~~~~~~~~~~i~~vfdv~p~~~G-------~~i~gipv~~~l~~~~~~~-~idiaii~VP~~- 73 (96)
T pfam02629 3 DTKVAVIGASGLGIQGLYHFIQLLGYGIKMVFGVNPRKGG-------TEVGGIPVYKSVDELEEDT-GVDVAVITVPAP- 73 (96)
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCC-------CEECCEEEECCHHHHHHCC-CCCEEEEEECHH-
T ss_conf 7749999989827888776887714861899806924277-------5888998431087774155-887899994789-
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999972
Q gi|254780716|r 81 PVDQLIDKLKP 91 (475)
Q Consensus 81 ~v~~vi~~l~~ 91 (475)
.+.++++++..
T Consensus 74 ~a~~~~~~~v~ 84 (96)
T pfam02629 74 FAQEAIDELVD 84 (96)
T ss_pred HHHHHHHHHHH
T ss_conf 98999999998
No 166
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.91 E-value=0.0035 Score=42.96 Aligned_cols=12 Identities=33% Similarity=0.576 Sum_probs=6.3
Q ss_pred EEEECCCCHHHH
Q ss_conf 898569874678
Q gi|254780716|r 171 CALLGPDGSGHF 182 (475)
Q Consensus 171 v~y~G~~GsGh~ 182 (475)
+.-+|.+|++.-
T Consensus 130 vlilGaGGaa~a 141 (284)
T PRK12549 130 VVQLGAGGAGAA 141 (284)
T ss_pred EEEECCCCHHHH
T ss_conf 899656616899
No 167
>TIGR01087 murD UDP-N-acetylmuramoylalanine--D-glutamate ligase; InterPro: IPR005762 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) , MurD (6.3.2.9 from EC) , MurE (6.3.2.13 from EC) and MurF (6.3.2.10 from EC) . These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales . This entry represents UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD). MurD catalyses the addition of d-glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-l-alanine. ; GO: 0005524 ATP binding, 0008764 UDP-N-acetylmuramoylalanine-D-glutamate ligase activity, 0008360 regulation of cell shape, 0009252 peptidoglycan biosynthetic process, 0009273 peptidoglycan-based cell wall biogenesis, 0051301 cell division, 0005737 cytoplasm.
Probab=96.89 E-value=0.019 Score=37.53 Aligned_cols=129 Identities=22% Similarity=0.250 Sum_probs=79.0
Q ss_pred EEEEEECCHHHH--HHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEE--CCCHH
Q ss_conf 056981571116--88999997898599973998999999971221127840328989998605778899997--69906
Q gi|254780716|r 5 DIGIIGLGSMGS--NLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMM--VTDGD 80 (475)
Q Consensus 5 ~IGiIGLG~MG~--~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~--vp~g~ 80 (475)
+|.|+|||.=|. ++|+.|.++|..|.++|..+....+...................+-.......++|+.+ ||-..
T Consensus 1 ~i~i~GlG~tG~G~a~a~~L~~~g~~~~~~D~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~vv~SPGi~~~h 80 (476)
T TIGR01087 1 KILILGLGKTGRGVAVARFLKKKGAEVTVTDDDPEEELERSKGQLKLSEGVVLYTGGKDDLEDLNNADLVVLSPGIPPDH 80 (476)
T ss_pred CEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCC
T ss_conf 97899867510789999999972987999984522134311331245564135326753101233420799789898677
Q ss_pred H-HHHHHH---------HHHHCCC----CCCEE-EECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCC
Q ss_conf 9-999999---------9972078----99899-9679865789999999998479943067546760
Q gi|254780716|r 81 P-VDQLID---------KLKPLLS----PEDIL-LDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGV 133 (475)
Q Consensus 81 ~-v~~vi~---------~l~~~l~----~g~ii-ID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~ 133 (475)
+ +.+... +|.-.+. +..+| |-|||---..|.-.+..|++.|+..+-||=.|.|
T Consensus 81 p~~~~a~~~g~~v~gdi~L~~~~~~~~~~~~~~aITGTnGKtTTT~L~~~~L~~~G~~a~~gGNIG~p 148 (476)
T TIGR01087 81 PLVQAAAKRGIPVVGDIELALRLVDFPEPAKVVAITGTNGKTTTTSLLYHLLKAAGLKAVLGGNIGTP 148 (476)
T ss_pred HHHHHHHHCCCEEEEHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEECCCCCH
T ss_conf 79999996698089867999974157898737999726860799999999998469977862578812
No 168
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit; InterPro: IPR014215 This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by IPR014214 from INTERPRO. This protein is also known as SpoVFA..
Probab=96.85 E-value=0.014 Score=38.46 Aligned_cols=114 Identities=14% Similarity=0.191 Sum_probs=79.3
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 80569815711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
|++-++|+|+.|..+|+-|..-|=+|.|.=|+.....+..+.+- .+...+.+++ .+...|+||=.||+==.+
T Consensus 153 S~v~VlGfGRtG~tiAr~f~aLGA~V~V~AR~~~dlARI~E~g~----~P~~~~~L~~---~v~e~DIviNTiPaLvlt- 224 (288)
T TIGR02853 153 SNVMVLGFGRTGMTIARTFSALGARVSVGARSSADLARITEMGL----EPVPLNKLEE---KVAEIDIVINTIPALVLT- 224 (288)
T ss_pred CEEEEECCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCC----CCCCHHHHHH---HHCCCCEEEECCCCCCCC-
T ss_conf 34578844705689999997269805753178367899999606----8827167887---650002477067630036-
Q ss_pred HHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEE-CCCCCC
Q ss_conf 999999720789989996798657899999999984799430-675467
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFI-GIGVSG 131 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fi-d~pVSG 131 (475)
..++..|.+..+|||..+ .|-=|.= +.++++|+.-+ -.|.=|
T Consensus 225 ---~~~l~~lp~~AviiDLAS-~PGGtDF--~yAk~~Gi~A~LAPGLPG 267 (288)
T TIGR02853 225 ---KDVLSKLPKHAVIIDLAS-KPGGTDF--EYAKKRGIKALLAPGLPG 267 (288)
T ss_pred ---HHHHHHCCCCCEEEEECC-CCCCCCH--HHHHHCCCEEEECCCCCC
T ss_conf ---589952685848997327-8487376--989862982897187878
No 169
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.84 E-value=0.041 Score=35.13 Aligned_cols=118 Identities=13% Similarity=0.169 Sum_probs=66.6
Q ss_pred CCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEE--CCCH
Q ss_conf 98805698157111688999997898599973998999999971221127840328989998605778899997--6990
Q gi|254780716|r 2 KQADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMM--VTDG 79 (475)
Q Consensus 2 ~k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~--vp~g 79 (475)
++ +|.++|||.=|.+.|+-|.+.|.+|.+||..........+.... ..+. .....+ .++..+.|+.+ +|..
T Consensus 17 ~~-kvlV~GlG~SG~s~a~~L~~~G~~v~~~D~~~~~~~~~~~~~~~--~~~~-~~~~~~---~~~~~d~vV~SPGI~~~ 89 (476)
T PRK00141 17 RG-RVLVAGAGVSGLGIAKMLSELGCDVVVADDNETQRHMLIEVVDV--ADIS-TAQASD---ALDSYSIVVTSPGWRPD 89 (476)
T ss_pred CC-CEEEEEECHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCC--CEEC-CCCHHH---HHCCCCEEEECCCCCCC
T ss_conf 99-88999227889999999997899799998998703578874798--5651-553065---64689999989978997
Q ss_pred H-HHHHHHH---------HHHHCC-------CCCC-EEEECCCCCHHHHHHHHHHHHHCCCCEEC
Q ss_conf 6-9999999---------997207-------8998-99967986578999999999847994306
Q gi|254780716|r 80 D-PVDQLID---------KLKPLL-------SPED-ILLDGGNSHFCDTQIRSLQLSEKGIYFIG 126 (475)
Q Consensus 80 ~-~v~~vi~---------~l~~~l-------~~g~-iiID~sts~~~~t~~~~~~l~~kgi~fid 126 (475)
. .+..... ++.-.+ .+.. |-|-+||---..|.-.+..|++.|..-.-
T Consensus 90 ~p~l~~a~~~gi~viseiel~~~~~~~~~~~~~~~~IaVTGTnGKTTTtsli~~iL~~~g~~~~~ 154 (476)
T PRK00141 90 SPLLVDAQSAGLEVIGDVELAWRLDQAGVFGEPRTWLAVTGTNGKTTTTAMLAAMMQAGGFAAVA 154 (476)
T ss_pred CHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEE
T ss_conf 99999999879957719999998611643367776388968996798999999999837997289
No 170
>PRK10206 putative dehydrogenase; Provisional
Probab=96.80 E-value=0.058 Score=34.03 Aligned_cols=114 Identities=11% Similarity=0.189 Sum_probs=76.8
Q ss_pred CCCCEEEEEECCHHHHHHHHH-HHH--CCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECC
Q ss_conf 998805698157111688999-997--89859997399899999997122112784032898999860577889999769
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLN-ILD--KGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVT 77 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~n-L~~--~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp 77 (475)
|+- ++|+||.|..|...-.- |+. ..+.|.+..+..++.++..+.. ..+..+.+++|+.+. +..+.|+++.|
T Consensus 1 m~i-rvaiiG~G~~~~~fH~P~i~~~~~~~~v~~v~~~~~~~~~~a~~~----~~~~~~~~~~~ll~~-~~id~V~i~tP 74 (345)
T PRK10206 1 MVI-NCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIY----SHIHFTSDLDEVLND-PDVKLVVVCTH 74 (345)
T ss_pred CEE-EEEEECCCHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHC----CCCCEECCHHHHHCC-CCCCEEEECCC
T ss_conf 924-799992649999998999963899579999978876188888776----998122899999549-99999998799
Q ss_pred CHHHHHHHHHHHHHCCCCCCEEEEC-CCCCHHHHHHHHHHHHHCCCC
Q ss_conf 9069999999997207899899967-986578999999999847994
Q gi|254780716|r 78 DGDPVDQLIDKLKPLLSPEDILLDG-GNSHFCDTQIRSLQLSEKGIY 123 (475)
Q Consensus 78 ~g~~v~~vi~~l~~~l~~g~iiID~-sts~~~~t~~~~~~l~~kgi~ 123 (475)
+..+.+-+..-|..+ -.++++= =+.+..+..++.+.++++|+.
T Consensus 75 ~~~H~~~a~~al~aG---khV~~EKP~~~~~~ea~~l~~~a~~~g~~ 118 (345)
T PRK10206 75 ADSHFEYAKRALEAG---KNVLVEKPFTPTLAQAKELFALAKSKGLT 118 (345)
T ss_pred CHHHHHHHHHHHHCC---CCEEEECCCCCCHHHHHHHHHHHHHCCCE
T ss_conf 578999999999789---92898036649899999999999970997
No 171
>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating; InterPro: IPR006113 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) , . Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved . The protein is a homodimer in which the monomers act independently : each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet . NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket . This model does not specify whether the cofactor is NADP only, NAD only, or both.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0050661 NADP binding, 0006098 pentose-phosphate shunt.
Probab=96.80 E-value=0.0024 Score=44.16 Aligned_cols=124 Identities=14% Similarity=0.253 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH---HHHHCCCEEEHHHHHHHHHHHHHC-CC-CCCCCCCHH
Q ss_conf 9999999999999999999999996110145667988999---985189468537899999998708-88-520007989
Q gi|254780716|r 320 VKDLENALYASTILSFTQGFWVIGKSSEKYSWSLSLATIA---RIWRAGCIIRSQILNDIVKSLTED-PS-STNLLNIPS 394 (475)
Q Consensus 320 i~~L~~a~~~~~i~syaQGf~ll~~as~~y~w~l~l~~ia---~iW~~GCIIrs~lL~~i~~~~~~~-~~-l~~Ll~~~~ 394 (475)
++.+||-+-.+=|=-.++.-.+|+.. .+|...+|+ .-|+. --+.|.|++=.+++|... ++ ...| .+.
T Consensus 183 VKMVHNGIEYGDMQLI~EAY~~lK~~-----L~L~~~~i~~vF~~WN~-g~L~SYLIeIT~~IL~~kD~~TG~pL--vd~ 254 (480)
T TIGR00873 183 VKMVHNGIEYGDMQLIAEAYDILKEG-----LGLSNEEIAEVFTEWNN-GELDSYLIEITADILAKKDEDTGKPL--VDK 254 (480)
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHH-----HCCCHHHHHHHHHHHCC-CCCCHHHHHHHHHHHHCCCCCCCCCE--EHH
T ss_conf 53257671177798999999999865-----18888899999855237-77642688999998621350027512--311
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH-HHHHH-HCCCCCHHHHHHHHHHCCC-CCEEEE
Q ss_conf 999999524769999999998399847999999-99986-2178875899998761045-732242
Q gi|254780716|r 395 ISEKVKKTIPSLRRIVVTCTENGYPVPSLSAAL-SYFDT-FIHDRGTANLIQAQRDFFG-SHGFDR 457 (475)
Q Consensus 395 ~~~~i~~~~~~lr~vv~~~i~~gip~P~lsssL-~y~~~-~~~~~~~~nliqaqRD~FG-aH~~~r 457 (475)
|.+.-..+.++ |||+..|++.|+|++.+..|+ +.+.| ....| ++|+|-+=| --..+.
T Consensus 255 ILD~AgQKGTG-kWT~~~ALd~G~P~tlI~EsVfAR~lSs~K~~R-----~~A~~~l~g~p~~~~~ 314 (480)
T TIGR00873 255 ILDTAGQKGTG-KWTAIDALDLGVPLTLITESVFARYLSSLKEER-----VAASKLLSGDPLAEEK 314 (480)
T ss_pred EECCCCCCCCC-HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH-----HHHHHHCCCCCCCCCC
T ss_conf 00334688674-157667653389820799999999884128999-----9999734889656778
No 172
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.76 E-value=0.062 Score=33.82 Aligned_cols=117 Identities=14% Similarity=0.269 Sum_probs=65.4
Q ss_pred CCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHH--HHHHHHHHCCCCCCCCEEC-CCHHHHHHHCCCCCEEEEE--CC
Q ss_conf 88056981571116889999978985999739989--9999997122112784032-8989998605778899997--69
Q gi|254780716|r 3 QADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFE--LTDVFIKKISGLSQKVIVT-KNLEQMVEAVCKPRKILMM--VT 77 (475)
Q Consensus 3 k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~--~~~~l~~~~~~~~~~~~~~-~s~~e~v~~l~~pr~Iil~--vp 77 (475)
..+|.|+|+|.-|.+.|+-|.++|++|.+||.+++ ....+.+.. .++... ....+. ....+++|+.+ +|
T Consensus 5 ~k~v~viGlG~sG~s~a~~L~~~G~~v~~~D~~~~~~~~~~~~~~~----~~i~~~~g~~~~~--~~~~~d~vV~SPgI~ 78 (445)
T PRK04308 5 NKKILVAGLGGTGISMIAYLRKNGAEVAAYDAELKAERVAQIGKMF----DGLVFYTGRLKDA--LDNGFDILALSPGIS 78 (445)
T ss_pred CCEEEEEEECHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCC----CCCEEEECCCHHH--HCCCCCEEEECCCCC
T ss_conf 9989999989999999999997899199997999953189997436----9968993786365--015999999899538
Q ss_pred CHHH-HHHHHH---------HHH-HCCC-C-CCEE-EECCCCCHHHHHHHHHHHHHCCCCEE
Q ss_conf 9069-999999---------997-2078-9-9899-96798657899999999984799430
Q gi|254780716|r 78 DGDP-VDQLID---------KLK-PLLS-P-EDIL-LDGGNSHFCDTQIRSLQLSEKGIYFI 125 (475)
Q Consensus 78 ~g~~-v~~vi~---------~l~-~~l~-~-g~ii-ID~sts~~~~t~~~~~~l~~kgi~fi 125 (475)
...+ +....+ +++ ..++ + ..+| |-+||---..|.-.+..+++.|....
T Consensus 79 ~~~p~l~~a~~~gi~i~~~~el~~~~~~~~~~~~IaVTGTnGKTTTtsli~~iL~~~g~~~~ 140 (445)
T PRK04308 79 ERQPDIEAFKQNGGRVLGDIELLADIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTV 140 (445)
T ss_pred CCCHHHHHHHHCCCCEECHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEE
T ss_conf 99999999997599571599999999841699579994899837799999999997599629
No 173
>PRK06349 homoserine dehydrogenase; Provisional
Probab=96.74 E-value=0.019 Score=37.57 Aligned_cols=167 Identities=19% Similarity=0.339 Sum_probs=95.3
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHC--------CCE---EEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCC
Q ss_conf 9988056981571116889999978--------985---99973998999999971221127840328989998605778
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDK--------GFR---LAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKP 69 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~--------G~~---V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~p 69 (475)
|++-+||++|+|+-|++.++-|.++ |.+ +.+.+|+.++...+ .........++.++++.- ..
T Consensus 1 M~~ikIgl~G~GtVG~gv~~il~~~~~~i~~~~g~~~~i~~i~~r~~~k~r~~------~~~~~~~t~d~~~i~~d~-~i 73 (432)
T PRK06349 1 MKPLKVGLLGLGTVGSGVVRILEENAEEIAARAGRPIEIKKVAVRDLEKDRGV------DLSGYLLTTDPEELVNDP-DI 73 (432)
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCC------CCCCCEEECCHHHHHCCC-CC
T ss_conf 95538999987806999999999809999998699769999996897535589------998555547999994389-99
Q ss_pred CEEEEECCCHHHHHHHHHHHHHCCCCCCEEEECCCCCH-HHHHHHHHHHHHCCCC-EECCCCCCCCCCCCCCCEEEEECC
Q ss_conf 89999769906999999999720789989996798657-8999999999847994-306754676000356843788454
Q gi|254780716|r 70 RKILMMVTDGDPVDQLIDKLKPLLSPEDILLDGGNSHF-CDTQIRSLQLSEKGIY-FIGIGVSGGVKGARSGASLMVGGN 147 (475)
Q Consensus 70 r~Iil~vp~g~~v~~vi~~l~~~l~~g~iiID~sts~~-~~t~~~~~~l~~kgi~-fid~pVSGG~~gA~~G~slMvGG~ 147 (475)
++|+=++...++..+.+. ..|+.|.-||-.--.-. ..-.++.+.++++|+. +.++-|.||..
T Consensus 74 divVEliGG~~~A~~~i~---~AL~~GkhVVTANKallA~~g~eL~~lA~~~gv~l~fEAaV~GGIP------------- 137 (432)
T PRK06349 74 DIVVELMGGIEPARELIL---AALEAGKHVVTANKALLAVHGNELFAAAEEKGVDLYFEAAVAGGIP------------- 137 (432)
T ss_pred CEEEEECCCCHHHHHHHH---HHHHCCCCEEECCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCH-------------
T ss_conf 899996699507999999---9998599689258799986799999999871964999632246612-------------
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCEEEEE-CC-CCHHHHH--HHHHHHHHHHHHHHHHHHH
Q ss_conf 899988899999875015678618985-69-8746789--8877678788899989999
Q gi|254780716|r 148 EKAYNRVENILLSISAKYQNSPCCALL-GP-DGSGHFV--KMIHNGIEYANMQLIADIY 202 (475)
Q Consensus 148 ~~~~~~~~piL~~iaak~~~~~cv~y~-G~-~GsGh~v--KMVhNgIey~~mq~iaE~~ 202 (475)
-++++-+.++... +.-+ |= .|.-.|. +|-.+|..|.. ++.||=
T Consensus 138 -----iI~~l~~~l~~~~-----i~~i~GIlNGTtNyILt~M~~~g~~f~~--aL~eAQ 184 (432)
T PRK06349 138 -----IIKALREGLAANR-----ITRVMGIVNGTTNYILTKMTEEGLSFED--ALKEAQ 184 (432)
T ss_pred -----HHHHHHHHHHCCC-----CEEEEEEECCCHHHHHHHHHHCCCCHHH--HHHHHH
T ss_conf -----0699987640477-----4377676247367999999871999999--999999
No 174
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.71 E-value=0.026 Score=36.54 Aligned_cols=83 Identities=17% Similarity=0.362 Sum_probs=61.6
Q ss_pred EEEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 05698--1571116889999978985999739989999999712211278403289899986057788999976990699
Q gi|254780716|r 5 DIGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 5 ~IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
++.+| |-+-+|..+|+.|+++|++|..++|++++.+++.++......++ ..+-.-+.+.+.+
T Consensus 6 Kv~lITGgs~GIG~a~a~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~----------------~~~~~Dl~~~~~~ 69 (246)
T PRK05653 6 KTALVTGASRGIGRAIALRLAADGARVVIYDSNEEAAEALAEELRAAGGEA----------------ALLVFDVTDEAAV 69 (246)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCE----------------EEEEEECCCHHHH
T ss_conf 889993897589999999999879999999799999999999999659948----------------9999728999999
Q ss_pred HHHHHHHHHCCCCCCEEEECC
Q ss_conf 999999972078998999679
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~s 103 (475)
+++++.+.....+=|++|...
T Consensus 70 ~~~~~~~~~~~g~iDilvnnA 90 (246)
T PRK05653 70 RALIEAAVERFGGLDVLVNNA 90 (246)
T ss_pred HHHHHHHHHHCCCCCEEEECC
T ss_conf 999999999749986999899
No 175
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=96.71 E-value=0.024 Score=36.80 Aligned_cols=82 Identities=22% Similarity=0.395 Sum_probs=61.2
Q ss_pred EEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 5698--15711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 6 IGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 6 IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
+.+| |-+-+|..+|++|++.|.+|.++||+.++.+++.++-.....++ ..+-.-|.+.+.++
T Consensus 5 valITG~s~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~g~~~----------------~~~~~Dv~d~~~v~ 68 (250)
T TIGR03206 5 TAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNA----------------QAFACDITDRDSVD 68 (250)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCE----------------EEEEECCCCHHHHH
T ss_conf 99996857689999999999879999999798899999999999539928----------------99994489999999
Q ss_pred HHHHHHHHCCCCCCEEEECC
Q ss_conf 99999972078998999679
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~s 103 (475)
+.++.+.....+=|++|...
T Consensus 69 ~~v~~~~~~~G~iDilvnnA 88 (250)
T TIGR03206 69 TAVAAAEQALGPVDVLVNNA 88 (250)
T ss_pred HHHHHHHHHCCCCCEEEECC
T ss_conf 99999999759997999898
No 176
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=96.70 E-value=0.0081 Score=40.31 Aligned_cols=126 Identities=16% Similarity=0.199 Sum_probs=72.1
Q ss_pred CCCEEEEEECCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHCC-CC-CCCCEECCCHHHHHHHCCCCCEEEEECCC
Q ss_conf 98805698157111688999997898-59997399899999997122-11-27840328989998605778899997699
Q gi|254780716|r 2 KQADIGIIGLGSMGSNLSLNILDKGF-RLAVYNKDFELTDVFIKKIS-GL-SQKVIVTKNLEQMVEAVCKPRKILMMVTD 78 (475)
Q Consensus 2 ~k~~IGiIGLG~MG~~mA~nL~~~G~-~V~vydr~~~~~~~l~~~~~-~~-~~~~~~~~s~~e~v~~l~~pr~Iil~vp~ 78 (475)
.+++|.+||+|-.|.+.|.+|++.|. ++.+.|.+.=....+..+.- .+ .-+-.-+...++.+..+ .|.+-+...+.
T Consensus 20 ~~s~VlivG~GGlGs~~~~~La~~Gvg~i~lvD~D~ve~sNLnRQ~l~~~~diG~~K~~~a~~~l~~i-Np~i~i~~~~~ 98 (228)
T cd00757 20 KNARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAI-NPDVEIEAYNE 98 (228)
T ss_pred HCCCEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHEECHHHCCCCHHHHHHHHHHHH-CCCCCCEEHHH
T ss_conf 64978998877889999999998399758999787455676422102378668789599999999854-88753031321
Q ss_pred HHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCC
Q ss_conf 0699999999972078998999679865789999999998479943067546760
Q gi|254780716|r 79 GDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGV 133 (475)
Q Consensus 79 g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~ 133 (475)
. ... +.+.+.++.-|+||||+- ++..-.-..+.+.+.++-++.+++.|-.
T Consensus 99 ~-i~~---~~~~~~~~~~DlVid~~D-n~~~R~~ln~~~~~~~iP~i~g~~~g~~ 148 (228)
T cd00757 99 R-LDA---ENAEELIAGYDLVLDCTD-NFATRYLINDACVKLGKPLVSGAVLGFE 148 (228)
T ss_pred C-CCH---HHHHHHHHCCCEEEECCC-CHHHHHHHHHHHHHCCCCEEEEEECCCE
T ss_conf 0-057---569988737989998779-9889999999999839988999740028
No 177
>PTZ00117 malate dehydrogenase; Provisional
Probab=96.68 E-value=0.028 Score=36.34 Aligned_cols=103 Identities=19% Similarity=0.298 Sum_probs=60.6
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHH---HCCCCC---CCCEECCCHHHHHHHCCCCCEEE
Q ss_conf 998805698157111688999997898-59997399899999997---122112---78403289899986057788999
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGF-RLAVYNKDFELTDVFIK---KISGLS---QKVIVTKNLEQMVEAVCKPRKIL 73 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~-~V~vydr~~~~~~~l~~---~~~~~~---~~~~~~~s~~e~v~~l~~pr~Ii 73 (475)
|.| |++||.|..|..+|..|+..+. ++..+|+++++++.-.- ...... ..+.+..+.++ +...++|+
T Consensus 1 M~K--V~IIGaG~VG~~~A~~l~~~~~~eivLiDi~~~~a~g~a~Dl~h~~~~~~~~~~i~~~~dy~~----~~daDiVV 74 (313)
T PTZ00117 1 MKK--ISIIGSGQIGAIVGLLLLQENLGDVYLYDVIEGVPQGKALDLKHFSTIIGVNANILGTNNYED----IKDSDVIV 74 (313)
T ss_pred CCE--EEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHH----HCCCCEEE
T ss_conf 978--999897989999999997089987999958898308899887724203689857983799999----68999999
Q ss_pred EECCC---------------HHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHH
Q ss_conf 97699---------------0699999999972078998999679865789999
Q gi|254780716|r 74 MMVTD---------------GDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQI 112 (475)
Q Consensus 74 l~vp~---------------g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~ 112 (475)
+..-. .+.+.++...+..+. ++.++|-.+ +|-|..-
T Consensus 75 itAG~~rk~g~tR~dLl~~N~~I~~~i~~~i~~~~-p~aiiivvt--NPvDimt 125 (313)
T PTZ00117 75 ITAGVQRKEGMTREDLIGVNGKIMKSVAESVKKHC-PNAFVICVS--NPLDIMV 125 (313)
T ss_pred ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC-CCEEEEECC--CCHHHHH
T ss_conf 89899899799889999876777888887762358-980899789--9489999
No 178
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=96.65 E-value=0.067 Score=33.56 Aligned_cols=126 Identities=21% Similarity=0.252 Sum_probs=72.8
Q ss_pred CCCCEEEEEEC-CHHHHHHHHHHHHC-CCEEE-EEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECC
Q ss_conf 99880569815-71116889999978-98599-97399899999997122112784032898999860577889999769
Q gi|254780716|r 1 MKQADIGIIGL-GSMGSNLSLNILDK-GFRLA-VYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVT 77 (475)
Q Consensus 1 M~k~~IGiIGL-G~MG~~mA~nL~~~-G~~V~-vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp 77 (475)
|+. +|+++|. |+||+.++.-+.+. ++.+. ++|+..... .-.++.++... + +
T Consensus 1 m~i-kI~i~Ga~GrMG~~i~~~i~~~~~~~l~~~i~~~~~~~---------------~g~~~~~~~~~-~---------~ 54 (265)
T PRK00048 1 MMI-KVGVAGASGRMGRELIEAVEAAEDLELVAALDRPGSPL---------------VGQDAGELAGL-G---------K 54 (265)
T ss_pred CCE-EEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCC---------------CCCCHHHHCCC-C---------C
T ss_conf 945-99998888877999999998689979999994689723---------------36535665276-7---------6
Q ss_pred CHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEECCHHHHHHHHHH
Q ss_conf 90699999999972078998999679865789999999998479943067546760003568437884548999888999
Q gi|254780716|r 78 DGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGVKGARSGASLMVGGNEKAYNRVENI 157 (475)
Q Consensus 78 ~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~~gA~~G~slMvGG~~~~~~~~~pi 157 (475)
.+.. +.+.+...+.+-|++||. +.|+.+....+.+.+.++.++ .|++| -+++.++.++.
T Consensus 55 ~~~~---~~~~l~~~~~~~DVvIDF--S~p~~~~~~~~~~~~~~~~~V-iGTTG--------------~~~~~~~~i~~- 113 (265)
T PRK00048 55 LGVP---ITDDLEAVLDDFDVLIDF--TTPEATLENLEFALEHGKPLV-IGTTG--------------FTEEQLAALRE- 113 (265)
T ss_pred CCCE---ECCCHHHHHCCCCEEEEC--CCHHHHHHHHHHHHHCCCCEE-EEECC--------------CCHHHHHHHHH-
T ss_conf 7843---117898860559989989--988999999999997499779-96089--------------99899999997-
Q ss_pred HHHHHCCCCCCCEEEEECCCCHH
Q ss_conf 99875015678618985698746
Q gi|254780716|r 158 LLSISAKYQNSPCCALLGPDGSG 180 (475)
Q Consensus 158 L~~iaak~~~~~cv~y~G~~GsG 180 (475)
.+.+.. |.|...-.-|
T Consensus 114 ---~s~~ip----il~apNfSlG 129 (265)
T PRK00048 114 ---AAKKIP----VVIAPNFSVG 129 (265)
T ss_pred ---HCCCCC----EEEECCHHHH
T ss_conf ---465887----8997855899
No 179
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=96.64 E-value=0.01 Score=39.59 Aligned_cols=126 Identities=13% Similarity=0.238 Sum_probs=75.8
Q ss_pred CCCEEEEEECCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHCC----CCCCCCEECCCHHHHHHHCCCCCEEEEEC
Q ss_conf 98805698157111688999997898-59997399899999997122----11278403289899986057788999976
Q gi|254780716|r 2 KQADIGIIGLGSMGSNLSLNILDKGF-RLAVYNKDFELTDVFIKKIS----GLSQKVIVTKNLEQMVEAVCKPRKILMMV 76 (475)
Q Consensus 2 ~k~~IGiIGLG~MG~~mA~nL~~~G~-~V~vydr~~~~~~~l~~~~~----~~~~~~~~~~s~~e~v~~l~~pr~Iil~v 76 (475)
.+++|-+||+|-.|.+.|..|++.|. ++.+.|++.=....+..+-- ...+...-+...++....+. |.+-+..+
T Consensus 23 ~~a~VlVvGaGGLGs~~a~~La~aGVG~i~ivD~D~Ve~SNL~RQ~L~~e~Dig~~~pKa~aA~~~L~~iN-p~v~I~~~ 101 (339)
T PRK07688 23 REKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEIN-SEVRVEAI 101 (339)
T ss_pred HCCCEEEECCCHHHHHHHHHHHHCCCCEEEEEECCEECCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHCC-CCCEEEEE
T ss_conf 62978998777777999999998489829998099924667886506562133226377999999998349-98605876
Q ss_pred CCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCC
Q ss_conf 990699999999972078998999679865789999999998479943067546760
Q gi|254780716|r 77 TDGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGV 133 (475)
Q Consensus 77 p~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~ 133 (475)
+.. ...+-+.++ ++.-|+|||++- +++.-.-....|.+.++-++-+++.|..
T Consensus 102 ~~~-l~~~n~~~l---i~~~DlViD~tD-Nf~tR~liNd~c~~~~~PlV~ga~~g~~ 153 (339)
T PRK07688 102 VQD-VTAEELEEL---VTNVDVIIDATD-NFETRFIVNDAAQKYSIPWIYGACVGSY 153 (339)
T ss_pred ECC-CCHHHHHHH---HHCCCEEEECCC-CHHHHHHHHHHHHHHCCCEEEEEEECCE
T ss_conf 003-998999999---851889998788-9999999999999959998999884468
No 180
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=96.64 E-value=0.049 Score=34.59 Aligned_cols=85 Identities=18% Similarity=0.260 Sum_probs=59.7
Q ss_pred CCCCEEEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCE--EEEEC
Q ss_conf 998805698--15711168899999789859997399899999997122112784032898999860577889--99976
Q gi|254780716|r 1 MKQADIGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRK--ILMMV 76 (475)
Q Consensus 1 M~k~~IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~--Iil~v 76 (475)
|.| +.+| |-+-+|..+|+.|++.|++|.+.||+.++.+++.++..... ...++ +-.-|
T Consensus 1 mnK--valITG~s~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~l~~~~----------------~~~~~~~~~~Dv 62 (259)
T PRK12384 1 MNK--VAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEY----------------GEGMAYGFGADA 62 (259)
T ss_pred CCC--EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHC----------------CCCEEEEEECCC
T ss_conf 997--89994688689999999999879999999798899999999998624----------------886089998327
Q ss_pred CCHHHHHHHHHHHHHCCCCCCEEEECC
Q ss_conf 990699999999972078998999679
Q gi|254780716|r 77 TDGDPVDQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 77 p~g~~v~~vi~~l~~~l~~g~iiID~s 103 (475)
.+.+.++.+++.+.....+=|++|...
T Consensus 63 ~~~~~v~~~~~~~~~~~G~iDilVnnA 89 (259)
T PRK12384 63 TSEQSVLALSRGVDEIFGRVDLLVYSA 89 (259)
T ss_pred CCHHHHHHHHHHHHHHHCCCCEEEECC
T ss_conf 999999999999999829971999899
No 181
>KOG2305 consensus
Probab=96.64 E-value=0.01 Score=39.54 Aligned_cols=199 Identities=17% Similarity=0.186 Sum_probs=124.6
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----------CCCC---------CCCCEECCCHHH
Q ss_conf 998805698157111688999997898599973998999999971----------2211---------278403289899
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKK----------ISGL---------SQKVIVTKNLEQ 61 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~----------~~~~---------~~~~~~~~s~~e 61 (475)
|+-.+||++|-|..|+.-|.-++..||.|..||..++......++ ...+ -.-+.++.+++|
T Consensus 1 ms~~ki~ivgSgl~g~~WAmlFAs~GyqVqlYDI~e~Ql~~ALen~~Kel~~Lee~g~lrGnlsa~eqla~is~t~~l~E 80 (313)
T KOG2305 1 MSFGKIAIVGSGLVGSSWAMLFASSGYQVQLYDILEKQLQTALENVEKELRKLEEHGLLRGNLSADEQLALISGTTSLNE 80 (313)
T ss_pred CCCCCEEEEECCCCCCHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHH
T ss_conf 98650467623231225999986067269976235999999999999999999972101267648888888708864999
Q ss_pred HHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCE
Q ss_conf 98605778899997699069999999997207899899967986578999999999847994306754676000356843
Q gi|254780716|r 62 MVEAVCKPRKILMMVTDGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGVKGARSGAS 141 (475)
Q Consensus 62 ~v~~l~~pr~Iil~vp~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~~gA~~G~s 141 (475)
++...- .|--|+|..-....-+..-+..+-...+|+-.|||.+.-+.--+- +..+.-..+.-||----- =|.
T Consensus 81 ~vk~Ai---~iQEcvpE~L~lkk~ly~qlD~i~d~~tIlaSSTSt~mpS~~s~g-L~~k~q~lvaHPvNPPyf----iPL 152 (313)
T KOG2305 81 LVKGAI---HIQECVPEDLNLKKQLYKQLDEIADPTTILASSTSTFMPSKFSAG-LINKEQCLVAHPVNPPYF----IPL 152 (313)
T ss_pred HHHHHH---HHHHHCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHH-HHHHHHEEEECCCCCCCC----CCH
T ss_conf 986334---688616576678999999998754886587226442576777566-652443257457999741----201
Q ss_pred --EE--EECCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
Q ss_conf --78--84548999888999998750156786189856987467898877678788899989999999964289978999
Q gi|254780716|r 142 --LM--VGGNEKAYNRVENILLSISAKYQNSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKNPLEIS 217 (475)
Q Consensus 142 --lM--vGG~~~~~~~~~piL~~iaak~~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~~i~ 217 (475)
+. +=-+.++.++...+++.+..+. |.+--+.+- -+.|-|.|++ +.|.+.+... +.++..++-
T Consensus 153 vElVPaPwTsp~tVdrt~~lM~sigq~p-----V~l~rei~G-----f~lnriq~Ai---lne~wrLvas-Gil~v~dvD 218 (313)
T KOG2305 153 VELVPAPWTSPDTVDRTRALMRSIGQEP-----VTLKREILG-----FALNRIQYAI---LNETWRLVAS-GILNVNDVD 218 (313)
T ss_pred HEECCCCCCCHHHHHHHHHHHHHHCCCC-----CCCCCCCCC-----CEECCCCHHH---HHHHHHHHHC-CCCCHHHHH
T ss_conf 1013688788027899999999837777-----544340114-----2421331889---9999999870-676522299
Q ss_pred HHHH
Q ss_conf 9998
Q gi|254780716|r 218 HLFS 221 (475)
Q Consensus 218 ~vf~ 221 (475)
.|+.
T Consensus 219 ~VmS 222 (313)
T KOG2305 219 AVMS 222 (313)
T ss_pred HHHH
T ss_conf 9986
No 182
>pfam06408 consensus
Probab=96.64 E-value=0.075 Score=33.20 Aligned_cols=150 Identities=18% Similarity=0.147 Sum_probs=93.6
Q ss_pred EEEEEECCHHHHHHHHHHHHC-C---CEEEEEECCHHHH--HHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCC
Q ss_conf 056981571116889999978-9---8599973998999--999971221127840328989998605778899997699
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDK-G---FRLAVYNKDFELT--DVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTD 78 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~-G---~~V~vydr~~~~~--~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~ 78 (475)
.|-+||.|..|+.+--=|.++ . -++.+-|...++. +.+.+.+ + +.|..-|+.
T Consensus 3 ~Iv~iGfGSIgq~~LPLl~rH~~~~~~~Itiid~~d~~~~~~~~~~~G------i----------------~fi~~~lT~ 60 (471)
T pfam06408 3 PILMIGFGSIGRGTLPLIERHFKFDRSNIVVIDPRDTKKDRKLLAEKG------I----------------RFVQTAVTK 60 (471)
T ss_pred CEEEECCCHHHHHHHHHHHHHCCCCHHHEEEECCCCCHHHHHHHHHCC------C----------------EEEECCCCH
T ss_conf 779987571674206788876078878989976787545667787569------7----------------688614587
Q ss_pred HHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCC---CCCCCCCCCCCEEEEECCHHHHHHHH
Q ss_conf 069999999997207899899967986578999999999847994306754---67600035684378845489998889
Q gi|254780716|r 79 GDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGV---SGGVKGARSGASLMVGGNEKAYNRVE 155 (475)
Q Consensus 79 g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pV---SGG~~gA~~G~slMvGG~~~~~~~~~ 155 (475)
+.-++++..++.....||.+||.+.. -++..+-+.|.++|+.|+|.-| .|+.......++ .+..|..-+
T Consensus 61 -eNy~~~L~~~L~~gg~gdflvnLSvn--iss~~ii~~C~e~GvlYldT~iEpW~g~y~d~~~~p~-----~RTnYalre 132 (471)
T pfam06408 61 -DNYKNVLDPLLKGGGGQGFCVNLSVD--TSSLDLMRLCREHGVLYVDTVVEPWLGFYFDADADNE-----ARTNYALRE 132 (471)
T ss_pred -HHHHHHHHHHHHCCCCCCEEEEEECC--CCHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCHH-----HHHHHHHHH
T ss_conf -88999999986267778879980115--7889999999980987755440356886667779855-----666699999
Q ss_pred HHHHHHHCCCCCCC-EEEEECC--CCHHHHHHH
Q ss_conf 99998750156786-1898569--874678988
Q gi|254780716|r 156 NILLSISAKYQNSP-CCALLGP--DGSGHFVKM 185 (475)
Q Consensus 156 piL~~iaak~~~~~-cv~y~G~--~GsGh~vKM 185 (475)
.+++..++. .++| +|.-+|- +=--||||-
T Consensus 133 ~~r~~~~~~-~~GpTAv~~hGANPGlVShfvKq 164 (471)
T pfam06408 133 TVRELKRDW-PGGPTAVSTCGANPGMVSWFVKQ 164 (471)
T ss_pred HHHHHHHHC-CCCCEEEEECCCCCHHHHHHHHH
T ss_conf 999999657-99980777468995189999999
No 183
>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.
Probab=96.63 E-value=0.029 Score=36.25 Aligned_cols=122 Identities=13% Similarity=0.135 Sum_probs=76.2
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHCCCCCCCC--EECCCHHHHHHHCCCCCEEEEECC
Q ss_conf 998805698157111688999997898-59997399899999997122112784--032898999860577889999769
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGF-RLAVYNKDFELTDVFIKKISGLSQKV--IVTKNLEQMVEAVCKPRKILMMVT 77 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~-~V~vydr~~~~~~~l~~~~~~~~~~~--~~~~s~~e~v~~l~~pr~Iil~vp 77 (475)
|.+++|=+||+|-.|..+|+||+-.|. .+.++|-+.-..+++..+.--..+.+ .-+....+..+.+. |.+=+...+
T Consensus 17 l~~s~Vli~G~~glg~Ei~Knlvl~Gv~~i~i~D~~~v~~~dl~~qf~~~~~dvg~~ra~~~~~~l~~lN-p~v~v~~~~ 95 (286)
T cd01491 17 LQKSNVLISGLGGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELN-PYVPVTVST 95 (286)
T ss_pred HHHCCEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHC-CCCEEEECC
T ss_conf 9759299999876399999999973996599995996886776347225777857888999999999648-982589635
Q ss_pred CHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCC
Q ss_conf 9069999999997207899899967986578999999999847994306754676
Q gi|254780716|r 78 DGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGG 132 (475)
Q Consensus 78 ~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG 132 (475)
. .. + ...+.+-++||-+. ..+....+..+.|++.++.|+.+.+.|-
T Consensus 96 ~-~~-~------~~~~~~fdvVv~t~-~~~~~~~~iN~~cR~~~i~Fi~~~~~G~ 141 (286)
T cd01491 96 G-PL-T------TDELLKFQVVVLTD-ASLEDQLKINEFCHSPGIKFISADTRGL 141 (286)
T ss_pred C-CC-C------HHHHCCCCEEEEEC-CCHHHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf 7-77-8------88853888899918-9989999998888775981999505775
No 184
>PRK08862 short chain dehydrogenase; Provisional
Probab=96.62 E-value=0.027 Score=36.42 Aligned_cols=81 Identities=17% Similarity=0.269 Sum_probs=57.4
Q ss_pred EEEE-E-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 5698-1-5711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 6 IGII-G-LGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 6 IGiI-G-LG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
+-+| | -+-+|..+|++|++.|.+|.++||++++.++..++.......+ ..+-..+.+.+.++
T Consensus 7 v~lITGas~GIG~aiA~~~A~~Ga~Vii~~r~~~~l~~~~~~i~~~g~~~----------------~~~~~d~~~~~~v~ 70 (227)
T PRK08862 7 IILITSAGSVLGRTISCHFARLGATLILCDQDQSALNDTYEQCSALTDNV----------------YSYQLKDFSQESIR 70 (227)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCE----------------EEEEECCCCHHHHH
T ss_conf 99997988799999999999879999999699999999999999758974----------------89995166199999
Q ss_pred HHHHHHHHCCCC-CCEEEEC
Q ss_conf 999999720789-9899967
Q gi|254780716|r 84 QLIDKLKPLLSP-EDILLDG 102 (475)
Q Consensus 84 ~vi~~l~~~l~~-g~iiID~ 102 (475)
+.++.+...... -|++|..
T Consensus 71 ~~~~~i~~~~g~~iDvLVNN 90 (227)
T PRK08862 71 HLFDAIEQQFNRAPDVLVNN 90 (227)
T ss_pred HHHHHHHHHHCCCCEEEEEC
T ss_conf 99999999958997499856
No 185
>cd01493 APPBP1_RUB Ubiquitin activating enzyme (E1) subunit APPBP1. APPBP1 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. ABPP1 contains part of the adenylation domain.
Probab=96.62 E-value=0.0072 Score=40.68 Aligned_cols=127 Identities=10% Similarity=0.093 Sum_probs=80.0
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHCCCCCCCC--EECCCHHHHHHHCCCCCEEEEECC
Q ss_conf 998805698157111688999997898-59997399899999997122112784--032898999860577889999769
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGF-RLAVYNKDFELTDVFIKKISGLSQKV--IVTKNLEQMVEAVCKPRKILMMVT 77 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~-~V~vydr~~~~~~~l~~~~~~~~~~~--~~~~s~~e~v~~l~~pr~Iil~vp 77 (475)
|.+++|-+||++-.|.-+|+||+-.|. .|.++|-+.-...++-.+.--..+.+ .-+....+....|. |.+-+..++
T Consensus 18 l~~s~VLiiG~~glG~EiaKNLvLaGV~svti~D~~~v~~~DLg~nFfl~~~diGk~Raea~~~~L~eLN-p~V~v~~~~ 96 (425)
T cd01493 18 LESAHVCLLNATATGTEILKNLVLPGIGSFTIVDGSKVDEEDLGNNFFLDASSLGKSRAEATCELLQELN-PDVNGSAVE 96 (425)
T ss_pred HHHCCEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHC-CCCCEEEEE
T ss_conf 9769399999971199999872132897699995991878885766156677858839999999999847-868547870
Q ss_pred CHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCC
Q ss_conf 906999999999720789989996798657899999999984799430675467
Q gi|254780716|r 78 DGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSG 131 (475)
Q Consensus 78 ~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSG 131 (475)
. ..+++++.-...+..=++||- ++.......+..+.|++++|.|+-+-+.|
T Consensus 97 ~--~~~~~~~~~~~~~~~f~vVV~-t~~~~~~~~~in~~cr~~~i~fI~~~~~G 147 (425)
T cd01493 97 E--SPEALLDNDPSFFSQFTVVIA-TNLPESTLLRLADVLWSANIPLLYVRSYG 147 (425)
T ss_pred C--CHHHHHHCCHHHHCCCCEEEE-ECCCHHHHHHHHHHHHHHCCCEEEEEEEC
T ss_conf 6--878864268767528338998-28899999999999998699789998244
No 186
>PRK09134 short chain dehydrogenase; Provisional
Probab=96.62 E-value=0.037 Score=35.43 Aligned_cols=87 Identities=21% Similarity=0.470 Sum_probs=58.5
Q ss_pred CCCCEEEEE-E-CCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECC
Q ss_conf 998805698-1-571116889999978985999-7399899999997122112784032898999860577889999769
Q gi|254780716|r 1 MKQADIGII-G-LGSMGSNLSLNILDKGFRLAV-YNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVT 77 (475)
Q Consensus 1 M~k~~IGiI-G-LG~MG~~mA~nL~~~G~~V~v-ydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp 77 (475)
|.+.++.+| | -+-+|..+|+.|++.|++|.+ |+++.++.+++.++......... .+-.-+.
T Consensus 6 ~~~~KvalVTGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~i~~~g~~~~----------------~~~~Dl~ 69 (256)
T PRK09134 6 MAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAV----------------ALQADLA 69 (256)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEE----------------EEECCCC
T ss_conf 999997999488678999999999987998999849998999999999996499189----------------9975589
Q ss_pred CHHHHHHHHHHHHHCCCCCCEEEECC
Q ss_conf 90699999999972078998999679
Q gi|254780716|r 78 DGDPVDQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 78 ~g~~v~~vi~~l~~~l~~g~iiID~s 103 (475)
+.+.++++++.......+=|++|...
T Consensus 70 ~~~~~~~~v~~~~~~~G~iDiLVnNA 95 (256)
T PRK09134 70 DEAQVRALVARASAALGPITLLVNNA 95 (256)
T ss_pred CHHHHHHHHHHHHHHHCCCCEEEECC
T ss_conf 99999999999999829987899887
No 187
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.61 E-value=0.042 Score=35.07 Aligned_cols=85 Identities=16% Similarity=0.214 Sum_probs=57.7
Q ss_pred EEEEE-ECC-H-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHH
Q ss_conf 05698-157-1-11688999997898599973998999999971221127840328989998605778899997699069
Q gi|254780716|r 5 DIGII-GLG-S-MGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDP 81 (475)
Q Consensus 5 ~IGiI-GLG-~-MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~ 81 (475)
++.+| |-+ . ||..+|++|++.|.+|.+.||+.++.++..++-...... .+...+..-|.+.+.
T Consensus 17 KvalVTGgsg~GIG~a~a~~la~~Ga~V~i~d~~~~~~~e~~~~~~~~~g~--------------~~v~~~~~Dvt~~~~ 82 (261)
T PRK07831 17 KVVVVTAAAGTGIGSATARRALEEGADVVISDIHERRLGETADELAAELGL--------------GRVEGVVCDVTSEAQ 82 (261)
T ss_pred CEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCC--------------CEEEEEECCCCCHHH
T ss_conf 849994999647899999999987998999808777789999999984387--------------728999756899999
Q ss_pred HHHHHHHHHHCCCCCCEEEECC
Q ss_conf 9999999972078998999679
Q gi|254780716|r 82 VDQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 82 v~~vi~~l~~~l~~g~iiID~s 103 (475)
++.+++.+...+..=|++|...
T Consensus 83 v~~~v~~~~~~~G~iDiLVNNA 104 (261)
T PRK07831 83 VDALIDAAVERLGRLDVLVNNA 104 (261)
T ss_pred HHHHHHHHHHHHCCCCEEEECC
T ss_conf 9999999999829986999888
No 188
>pfam05368 NmrA NmrA-like family. NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.
Probab=96.60 E-value=0.079 Score=33.02 Aligned_cols=91 Identities=15% Similarity=0.088 Sum_probs=60.6
Q ss_pred EEE-CCHHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHCCCCCCCCE-ECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 981-5711168899999789859997399899--9999971221127840-32898999860577889999769906999
Q gi|254780716|r 8 IIG-LGSMGSNLSLNILDKGFRLAVYNKDFEL--TDVFIKKISGLSQKVI-VTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 8 iIG-LG~MG~~mA~nL~~~G~~V~vydr~~~~--~~~l~~~~~~~~~~~~-~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
+.| -|..|+++++.|+++|++|.+..|++++ .+++...+.. -+. -..+++.+..+++..+.|+.++|.....
T Consensus 3 V~GatG~iG~~vv~~L~~~g~~Vr~l~R~~~~~~~~~l~~~gve---~v~gD~~d~~sl~~al~gvd~v~~~~~~~~~~- 78 (232)
T pfam05368 3 VFGATGYQGGSVVRASLKAGHPVRALVRDPKSELAKSLKAAGVE---LVEGDLDDHESLVEALKGVDVVFSVTGFWLSK- 78 (232)
T ss_pred EECCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCE---EEEECCCCHHHHHHHHCCCCEEEEECCCCCCH-
T ss_conf 98968289999999998589938999718736656666417988---99906888789999967998899915887417-
Q ss_pred HHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCE
Q ss_conf 99999972078998999679865789999999998479943
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYF 124 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~f 124 (475)
.....++..+.+++.|+..
T Consensus 79 ----------------------~~~~~~~~~~AA~~aGVk~ 97 (232)
T pfam05368 79 ----------------------EIEDGKKLADAAKEAGVKH 97 (232)
T ss_pred ----------------------HHHHHHHHHHHHHHCCCCC
T ss_conf ----------------------7999999999999739983
No 189
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=96.60 E-value=0.0096 Score=39.77 Aligned_cols=114 Identities=16% Similarity=0.179 Sum_probs=65.7
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 805698157111688999997898-5999739989999999712211278403289899986057788999976990699
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGF-RLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~-~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
.++-++|-|=++.+.+.-|++.|. +++++||+.++.+++.+........+. .....++.. .+..++|+=+.|.|-..
T Consensus 127 ~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~-~~~~~~~~~-~~~~dliINaTp~Gm~~ 204 (283)
T COG0169 127 KRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVE-AAALADLEG-LEEADLLINATPVGMAG 204 (283)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCC-CCCCCCCCC-CCCCCEEEECCCCCCCC
T ss_conf 8899989768999999999986998799995888999999998645056311-024554123-55457899788787778
Q ss_pred HH---HHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 99---999997207899899967986578999999999847994
Q gi|254780716|r 83 DQ---LIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIY 123 (475)
Q Consensus 83 ~~---vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~ 123 (475)
.. .+. ...+.++.++.|+=-. |..| ..-++++++|..
T Consensus 205 ~~~~~~~~--~~~l~~~~~v~D~vY~-P~~T-plL~~A~~~G~~ 244 (283)
T COG0169 205 PEGDSPVP--AELLPKGAIVYDVVYN-PLET-PLLREARAQGAK 244 (283)
T ss_pred CCCCCCCC--HHHCCCCCEEEEECCC-CCCC-HHHHHHHHCCCC
T ss_conf 87888886--7766867789981118-8788-899999985990
No 190
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=96.60 E-value=0.016 Score=38.21 Aligned_cols=141 Identities=14% Similarity=0.186 Sum_probs=79.8
Q ss_pred CCCEEEEEECCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHCC-C-CCCCCEECCCHHHHHHHCCCCCEEEEECCC
Q ss_conf 98805698157111688999997898-59997399899999997122-1-127840328989998605778899997699
Q gi|254780716|r 2 KQADIGIIGLGSMGSNLSLNILDKGF-RLAVYNKDFELTDVFIKKIS-G-LSQKVIVTKNLEQMVEAVCKPRKILMMVTD 78 (475)
Q Consensus 2 ~k~~IGiIGLG~MG~~mA~nL~~~G~-~V~vydr~~~~~~~l~~~~~-~-~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~ 78 (475)
.+++|.+||+|-.|.+.|.+|+..|. ++.+.|.+.=....+..+.- . ..-+..-+...++.+..+ .|.+-+..++.
T Consensus 31 ~~s~VlivG~GGlG~~~~~~La~aGvg~i~lvD~D~ve~sNLnRQ~l~~~~diG~~Kv~~a~~~l~~i-np~i~i~~~~~ 109 (245)
T PRK05690 31 KAARVLVVGLGGLGCAAAQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESAKAALARI-NPHIAIETINA 109 (245)
T ss_pred HHCCEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHCCCHHHCCCCHHHHHHHHHHHH-CCCCCEEEEHH
T ss_conf 71978998777778999999998599659999688678886788864598778988799999999975-88752263331
Q ss_pred HHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCC--EEEEECCHHHHHH
Q ss_conf 06999999999720789989996798657899999999984799430675467600035684--3788454899988
Q gi|254780716|r 79 GDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGVKGARSGA--SLMVGGNEKAYNR 153 (475)
Q Consensus 79 g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~~gA~~G~--slMvGG~~~~~~~ 153 (475)
....+. +.+.++.-|+|||++- ++..-....+.|.+.++-|+.+++.|.. |. .++++.+..-|+-
T Consensus 110 -~i~~~n---~~~li~~~DlViD~~D-n~~~R~~ln~~c~~~~~P~v~g~~~g~~-----Gqv~~~~p~~~~pC~~C 176 (245)
T PRK05690 110 -RLDDDE---LAALIAAHDLVLDCTD-NVATRNQLNAACFAAKKPLVSGAAIRME-----GQVTVFTYQDNEPCYRC 176 (245)
T ss_pred -CCCHHH---HHHHHHCCCEEEECCC-CHHHHHHHHHHHHHCCCCEEEEEEEEEE-----EEEEEEEECCCCCCHHH
T ss_conf -448889---9887507888998789-9999999999999719987987788658-----99999970799970554
No 191
>PRK11861 bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase; Provisional
Probab=96.59 E-value=0.01 Score=39.64 Aligned_cols=99 Identities=17% Similarity=0.272 Sum_probs=70.7
Q ss_pred EEEECCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECC-CCCCCCC-CCC-------CC-CE
Q ss_conf 99976990699999999972078998999679865789999999998479943067-5467600-035-------68-43
Q gi|254780716|r 72 ILMMVTDGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGI-GVSGGVK-GAR-------SG-AS 141 (475)
Q Consensus 72 Iil~vp~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~-pVSGG~~-gA~-------~G-~s 141 (475)
|++++|-+ ++.+++.++.|+++++.||-|.|.+--.-.....+.+..+-.+|+.. |+.|++. |.. .| .+
T Consensus 1 Vvla~Pv~-~~~~~~~~i~~~l~~~~ivTDvgS~K~~v~~~~~~~l~~~~~~fV~gHPmAGsE~sG~~aa~~~Lf~~~~~ 79 (673)
T PRK11861 1 VLLAAPVA-QTGPLLARIAPFLDASTIVTDAGSTKSDVVAAARAALGARIGQFVPGHPIAGRESSGVDAALADLYVGRNV 79 (673)
T ss_pred CEEECCHH-HHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCEE
T ss_conf 98963789-99999999861679996897785366999999998616678848555872887522677764788579859
Q ss_pred EE---EECCHHHHHHHHHHHHHHHCCCCCCCEEEEECCC
Q ss_conf 78---8454899988899999875015678618985698
Q gi|254780716|r 142 LM---VGGNEKAYNRVENILLSISAKYQNSPCCALLGPD 177 (475)
Q Consensus 142 lM---vGG~~~~~~~~~piL~~iaak~~~~~cv~y~G~~ 177 (475)
++ ...+.++.++++.+++++.++ +.++-+.
T Consensus 80 iltp~~~~~~~~~~~~~~~w~~~Ga~------v~~m~~~ 112 (673)
T PRK11861 80 VLCALPENAPDALARVEAMWRAARAD------VRAMSAE 112 (673)
T ss_pred EEECCCCCCHHHHHHHHHHHHHCCCE------EEECCHH
T ss_conf 99559999899999999999984998------9983879
No 192
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.58 E-value=0.054 Score=34.27 Aligned_cols=101 Identities=15% Similarity=0.207 Sum_probs=61.2
Q ss_pred EEEEEECCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHH---CCCCCC-CCEECCCHHHHHHHCCCCCEEEEECC-
Q ss_conf 05698157111688999997898--599973998999999971---221127-84032898999860577889999769-
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGF--RLAVYNKDFELTDVFIKK---ISGLSQ-KVIVTKNLEQMVEAVCKPRKILMMVT- 77 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~--~V~vydr~~~~~~~l~~~---~~~~~~-~~~~~~s~~e~v~~l~~pr~Iil~vp- 77 (475)
+|++||.|..|.++|..|+.++. ++..||+++++++..+.. ...... ......+.++ ++..++|++..-
T Consensus 2 KI~IIGaG~VG~~~A~~l~~~~l~~el~L~Di~~~~a~g~a~DL~~a~~~~~~~~i~~~~~~~----l~daDvVVitaG~ 77 (308)
T cd05292 2 KVAIVGAGFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAGDYAD----CKGADVVVITAGA 77 (308)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEECCHHH----HCCCCEEEECCCC
T ss_conf 799999488899999999867998879999188984512568766241036881684099999----7799999989999
Q ss_pred --------------CHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHH
Q ss_conf --------------90699999999972078998999679865789999
Q gi|254780716|r 78 --------------DGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQI 112 (475)
Q Consensus 78 --------------~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~ 112 (475)
+.+.+.++...+.++- ++.+++-.+| |-|...
T Consensus 78 ~rk~g~tR~dll~~Na~I~~~i~~~i~~~~-p~~ivivvsN--PvDv~t 123 (308)
T cd05292 78 NQKPGETRLDLLKRNVAIFKEIIPQILKYA-PDAILLVVTN--PVDVLT 123 (308)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCCEEEECCC--CHHHHH
T ss_conf 999899878999888999999999998419-9808997279--547899
No 193
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=96.58 E-value=0.02 Score=37.37 Aligned_cols=96 Identities=13% Similarity=0.231 Sum_probs=47.1
Q ss_pred EEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEE--ECCCHHHH
Q ss_conf 0569815711168899999789859997399899999997122112784032898999860577889999--76990699
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILM--MVTDGDPV 82 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil--~vp~g~~v 82 (475)
++-+||=|+.|.+-|+=..--|-+|.+.|++.++.+.+-+...... -+...+...+.+.+.+.+++|- .+|..++-
T Consensus 170 kv~iiGGGvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv--~~~~st~~~iee~v~~aDlvIgaVLIpgakaP 247 (371)
T COG0686 170 KVVVLGGGVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRV--HTLYSTPSNIEEAVKKADLVIGAVLIPGAKAP 247 (371)
T ss_pred CEEEECCCCCCCHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCEE--EEEECCHHHHHHHHHHCCEEEEEEEECCCCCC
T ss_conf 0899877612406999972368706999527788764067657666--99975899999874312679888884588786
Q ss_pred HHHHHHHHHCCCCCCEEEEC
Q ss_conf 99999997207899899967
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDG 102 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~ 102 (475)
.-|..+++..++||.+|||.
T Consensus 248 kLvt~e~vk~MkpGsVivDV 267 (371)
T COG0686 248 KLVTREMVKQMKPGSVIVDV 267 (371)
T ss_pred EEHHHHHHHHCCCCCEEEEE
T ss_conf 01069999744798589999
No 194
>PRK06223 malate dehydrogenase; Reviewed
Probab=96.57 E-value=0.048 Score=34.59 Aligned_cols=101 Identities=16% Similarity=0.273 Sum_probs=60.2
Q ss_pred EEEEEECCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHCC---CC---CCCCEECCCHHHHHHHCCCCCEEEEEC
Q ss_conf 05698157111688999997898--59997399899999997122---11---278403289899986057788999976
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGF--RLAVYNKDFELTDVFIKKIS---GL---SQKVIVTKNLEQMVEAVCKPRKILMMV 76 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~--~V~vydr~~~~~~~l~~~~~---~~---~~~~~~~~s~~e~v~~l~~pr~Iil~v 76 (475)
+|++||.|..|..+|..|+.+|. ++..+|+++++++....... .. ...+.+..+.++ +...++|++.-
T Consensus 2 KI~IiGaG~VG~~~a~~l~~~~l~~el~L~Di~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~d~~~----~~daDiVVita 77 (312)
T PRK06223 2 KISIIGAGNVGATLAHLLALKELGKDVVLFDIPEGIPQGKALDIAESSAVDGFDAKITGTNDYAD----IAGSDVVIITA 77 (312)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCHHH----HCCCCEEEEEC
T ss_conf 79999969899999999985799874899769997336798887651433688847983788899----57999999906
Q ss_pred --C--CH-----------HHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHH
Q ss_conf --9--90-----------699999999972078998999679865789999
Q gi|254780716|r 77 --T--DG-----------DPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQI 112 (475)
Q Consensus 77 --p--~g-----------~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~ 112 (475)
| .| +.+.++...+.++- ++.+++--+ +|-|+.-
T Consensus 78 g~~rk~g~tR~dll~~N~~I~k~i~~~i~~~~-p~~iilvvs--NPvDv~t 125 (312)
T PRK06223 78 GVPRKPGMSRDDLLGINAKIMKDVGEGIKKYA-PDAIVIVIT--NPVDAMT 125 (312)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCCEEEEEC--CCHHHHH
T ss_conf 77899998868999987899999999998409-981899936--9368999
No 195
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=96.57 E-value=0.012 Score=38.99 Aligned_cols=199 Identities=14% Similarity=0.215 Sum_probs=101.8
Q ss_pred CCCEEEEEECCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHCCCCCCCC----EECCCHHHHHHHCCCCCEEEEEC
Q ss_conf 98805698157111688999997898-59997399899999997122112784----03289899986057788999976
Q gi|254780716|r 2 KQADIGIIGLGSMGSNLSLNILDKGF-RLAVYNKDFELTDVFIKKISGLSQKV----IVTKNLEQMVEAVCKPRKILMMV 76 (475)
Q Consensus 2 ~k~~IGiIGLG~MG~~mA~nL~~~G~-~V~vydr~~~~~~~l~~~~~~~~~~~----~~~~s~~e~v~~l~~pr~Iil~v 76 (475)
.+++|-+||+|-.|.+.|..|++.|. ++.+.|++.=....+..+.--....+ .-+...++....++ |.+-+..+
T Consensus 23 ~~s~VlIVGaGGLGs~~a~~La~aGVG~l~ivD~D~Ve~SNL~RQ~L~~~~Dig~~k~Ka~aA~~~L~~iN-p~v~I~~~ 101 (337)
T PRK12475 23 REKHVLIIGAGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQYKPKAIAAAEHLRKIN-SEVEIVPV 101 (337)
T ss_pred HCCCEEEECCCHHHHHHHHHHHHCCCCEEEEEECCEECCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHC-CCCCEEEE
T ss_conf 63969999777778999999998289869998499831446745300222121557488999999998449-99744751
Q ss_pred CCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEECCHHHHHHHHH
Q ss_conf 99069999999997207899899967986578999999999847994306754676000356843788454899988899
Q gi|254780716|r 77 TDGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGVKGARSGASLMVGGNEKAYNRVEN 156 (475)
Q Consensus 77 p~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~~gA~~G~slMvGG~~~~~~~~~p 156 (475)
... ...+-+.+ .++.-|+|||++- +++.-.-+...|.+.++-++-+++.|...-. .++.+| +. |
T Consensus 102 ~~~-l~~~n~~~---li~~~DlViD~tD-Nf~tR~liNd~c~~~~~PlV~ga~~g~~G~~---~~~~p~-~t-------p 165 (337)
T PRK12475 102 VTD-VTVEEMEE---LIKEVDLIIDATD-NFDTRLLINDISQKYNIPWIYGGCVGSYGVT---YTIIPG-KT-------P 165 (337)
T ss_pred HHC-CCHHHHHH---HHHHCCEEEECCC-CHHHHHHHHHHHHHHCCCEEEEEEECCEEEE---EEECCC-CC-------C
T ss_conf 311-99799999---9861889998888-9999999999999969998998870568899---987799-98-------7
Q ss_pred HHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC
Q ss_conf 99987501567861898569874678988776787888999899999999642899789999998606884
Q gi|254780716|r 157 ILLSISAKYQNSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKNPLEISHLFSKWDTGK 227 (475)
Q Consensus 157 iL~~iaak~~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~~i~~vf~~w~~~~ 227 (475)
-+.++=......+.|.-.|--|.. +-|| |.||+ .|+..+|-. .+-....-.-.|+-|+...
T Consensus 166 CyrClf~~p~~~~tC~~~GVlgp~--~gii------gs~qa-~EaiK~l~g-~~~~l~~~ll~~D~~~~~~ 226 (337)
T PRK12475 166 CFRCLMEHPVGGATCDTAGIIQPA--VQIV------VAHQV-AEALKILVE-DFEALRETMLSFDIWNNQN 226 (337)
T ss_pred CHHHCCCCCCCCCCCCCCCCCCCH--HHHH------HHHHH-HHHHHHHHC-CCCCCCCCEEEEECCCCEE
T ss_conf 341157999989986457766333--8899------99999-999999848-9975658689999777879
No 196
>PTZ00325 malate dehydrogenase; Provisional
Probab=96.56 E-value=0.052 Score=34.39 Aligned_cols=103 Identities=17% Similarity=0.192 Sum_probs=58.7
Q ss_pred CCCCEEEEEEC-CHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHH-HHCCCCCCC-CEECCCHHHHHHHCCCCCEEEEE
Q ss_conf 99880569815-7111688999997898--5999739989999999-712211278-40328989998605778899997
Q gi|254780716|r 1 MKQADIGIIGL-GSMGSNLSLNILDKGF--RLAVYNKDFELTDVFI-KKISGLSQK-VIVTKNLEQMVEAVCKPRKILMM 75 (475)
Q Consensus 1 M~k~~IGiIGL-G~MG~~mA~nL~~~G~--~V~vydr~~~~~~~l~-~~~~~~~~~-~~~~~s~~e~v~~l~~pr~Iil~ 75 (475)
|.| |++||. |..|..+|..|..+|. ++..+|.++.+.+.+- ......... .....+..| .++..++|+++
T Consensus 1 m~K--V~IIGA~G~VG~s~A~~l~~~~~~~elvL~Di~~a~g~a~Dl~~~~~~~~~~~~~~~~~~e---~~~~aDIVVit 75 (313)
T PTZ00325 1 MFK--VAVLGAAGGIGQPLSLLLKRNPYVSTLSLYDIVGAPGVAADLSHIPSPAKVTGYAKGELHK---AVDGADVVLIV 75 (313)
T ss_pred CCE--EEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCEECCCCHHH---HHCCCCEEEEC
T ss_conf 938--9998999869999999998389977799980897266898886755535665452798889---84899899988
Q ss_pred CC---------------CHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHH
Q ss_conf 69---------------9069999999997207899899967986578999
Q gi|254780716|r 76 VT---------------DGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQ 111 (475)
Q Consensus 76 vp---------------~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~ 111 (475)
-- +.+.+.++...+..+- +..++|-.| +|-|+.
T Consensus 76 aG~~rkpg~tR~dLl~~N~~I~~~i~~~i~~~~-~~aiiivvt--NPvD~m 123 (313)
T PTZ00325 76 AGVPRKPGMTRDDLFNTNAGIVRDLVLACASSA-PKAIFGIIT--NPVNST 123 (313)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEEECC--CCHHHH
T ss_conf 898899789689999970699999999999769-980999736--824799
No 197
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.56 E-value=0.032 Score=35.94 Aligned_cols=77 Identities=19% Similarity=0.256 Sum_probs=57.9
Q ss_pred CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHH
Q ss_conf 57111688999997898599973998999999971221127840328989998605778899997699069999999997
Q gi|254780716|r 11 LGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQLIDKLK 90 (475)
Q Consensus 11 LG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi~~l~ 90 (475)
-.-+|..+|+.|++.|++|.+.+|+.++.+++.++....+... ..+-.-|.+.+.++++++.+.
T Consensus 15 s~GIG~aiA~~la~~Ga~V~l~~r~~~~l~~~~~~i~~~g~~~----------------~~~~~Dvtd~~~v~~~v~~~~ 78 (238)
T PRK07666 15 GRGIGRAVAIALAKEGVNVGLLARSEENLKAVAKEVEAEGVKA----------------VIATADVSDYEEVTTAIETLK 78 (238)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCE----------------EEEEEECCCHHHHHHHHHHHH
T ss_conf 7789999999999879989999899999999999999559927----------------999930799999999999999
Q ss_pred HCCCCCCEEEECC
Q ss_conf 2078998999679
Q gi|254780716|r 91 PLLSPEDILLDGG 103 (475)
Q Consensus 91 ~~l~~g~iiID~s 103 (475)
..+..=||+|...
T Consensus 79 ~~~G~iDiLVNNA 91 (238)
T PRK07666 79 NGLGSIDILINNA 91 (238)
T ss_pred HHHCCCCEEEECC
T ss_conf 9819987899847
No 198
>KOG2711 consensus
Probab=96.55 E-value=0.029 Score=36.19 Aligned_cols=98 Identities=16% Similarity=0.264 Sum_probs=66.3
Q ss_pred CCCEEEEEECCHHHHHHHHHHHHC--CC-----EEEEEECC------HHHHHHHHHH---------CCCCCCCCEECCCH
Q ss_conf 988056981571116889999978--98-----59997399------8999999971---------22112784032898
Q gi|254780716|r 2 KQADIGIIGLGSMGSNLSLNILDK--GF-----RLAVYNKD------FELTDVFIKK---------ISGLSQKVIVTKNL 59 (475)
Q Consensus 2 ~k~~IGiIGLG~MG~~mA~nL~~~--G~-----~V~vydr~------~~~~~~l~~~---------~~~~~~~~~~~~s~ 59 (475)
.+..|++||.|+.|+.+|+.+.++ ++ .|..|-+. .++..+.+.. +.....++.+..++
T Consensus 20 ~~~kV~ivGsGnWGsaiaki~~~n~~~~~~f~~~Vrmwv~ee~i~~~~~~L~eiIN~~heN~KYlpg~~lP~NvvAv~dl 99 (372)
T KOG2711 20 DPLKVCIVGSGNWGSAIAKIVGENVKEFPIFDPQVRMWVFEEEINGEAEKLTEIINSRHENVKYLPGIKLPENVVAVPDL 99 (372)
T ss_pred CCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCHH
T ss_conf 75379998168089999999865254055667303677750133770578998751556342336786599776765239
Q ss_pred HHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCEEEECC
Q ss_conf 99986057788999976990699999999972078998999679
Q gi|254780716|r 60 EQMVEAVCKPRKILMMVTDGDPVDQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 60 ~e~v~~l~~pr~Iil~vp~g~~v~~vi~~l~~~l~~g~iiID~s 103 (475)
.+ ++.+.++++..||+ +-+.+++++|..+.+++...|-+.
T Consensus 100 ~e---a~~dADilvf~vPh-Qf~~~ic~~l~g~vk~~~~aISL~ 139 (372)
T KOG2711 100 VE---AAKDADILVFVVPH-QFIPRICEQLKGYVKPGATAISLI 139 (372)
T ss_pred HH---HHCCCCEEEEECCH-HHHHHHHHHHHCCCCCCCEEEEEE
T ss_conf 98---84338889994871-547999999854257998078854
No 199
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.55 E-value=0.034 Score=35.70 Aligned_cols=114 Identities=14% Similarity=0.142 Sum_probs=64.7
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHH-----HHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEE--C
Q ss_conf 8056981571116889999978985999739989-----99999971221127840328989998605778899997--6
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFE-----LTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMM--V 76 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~-----~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~--v 76 (475)
.+|+++|||.=|.+.|+-|.+.|++|.++|-..+ ..+.+...+. .+..-....++. +..+.|+.+ +
T Consensus 15 k~v~V~GlG~sG~s~a~~L~~~G~~v~~~D~~~~~~~~~~~~~l~~~g~----~~~~g~~~~~~~---~~~d~vV~SPGI 87 (481)
T PRK01438 15 LRVVVAGLGVSGFPAADALHELGASVTVVADGDDDRSRERAALLEVLGA----TVRLGDGETTLP---EGTELVVTSPGW 87 (481)
T ss_pred CEEEEEEECHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHCCC----EEEECCCHHHHH---CCCCEEEECCCC
T ss_conf 9899995758899999999967998999979987448689998885498----899688756662---489999989978
Q ss_pred CCHHH-HHHHHH---------HHHH-CC----CCCC-EEEECCCCCHHHHHHHHHHHHHCCCCE
Q ss_conf 99069-999999---------9972-07----8998-999679865789999999998479943
Q gi|254780716|r 77 TDGDP-VDQLID---------KLKP-LL----SPED-ILLDGGNSHFCDTQIRSLQLSEKGIYF 124 (475)
Q Consensus 77 p~g~~-v~~vi~---------~l~~-~l----~~g~-iiID~sts~~~~t~~~~~~l~~kgi~f 124 (475)
|...+ +....+ +|.- .+ .+.. |-|-+||---..|.-.+..|+..|..-
T Consensus 88 ~~~~p~~~~a~~~gi~i~~eiel~~~~~~~~~~~~~~IaVTGTnGKTTTtsli~~iL~~~g~~~ 151 (481)
T PRK01438 88 RPTHPLLAAAAEAGIPVWGDVELAWRLRDPDGTPAPWLAVTGTNGKTTTVQMLASILRAAGLRA 151 (481)
T ss_pred CCCCHHHHHHHHCCCCEECHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCE
T ss_conf 9989999999986993861899999875213688878999389974609999999999669970
No 200
>PRK07576 short chain dehydrogenase; Provisional
Probab=96.53 E-value=0.087 Score=32.71 Aligned_cols=81 Identities=16% Similarity=0.241 Sum_probs=58.1
Q ss_pred EEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 5698--15711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 6 IGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 6 IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
+.+| |-+-+|.++|+.|++.|.+|.+.+|+.++.++..++-......+ ..+-.-|.+.+.++
T Consensus 10 ~alVTGgs~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~----------------~~~~~Dv~~~~~~~ 73 (260)
T PRK07576 10 NVFVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEA----------------LGVSADVRDYAAVE 73 (260)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCE----------------EEEEECCCCHHHHH
T ss_conf 89995896199999999999879999999798899999999999539948----------------99993189999999
Q ss_pred HHHHHHHHCCCCCCEEEEC
Q ss_conf 9999997207899899967
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDG 102 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~ 102 (475)
++++.+......=|++|..
T Consensus 74 ~~~~~~~~~~G~iDiLVnn 92 (260)
T PRK07576 74 AAFAAIADEFGPIDVLVSG 92 (260)
T ss_pred HHHHHHHHHHCCCCEEEEC
T ss_conf 9999999984999899989
No 201
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=96.51 E-value=0.057 Score=34.08 Aligned_cols=115 Identities=20% Similarity=0.164 Sum_probs=67.3
Q ss_pred CCEEEEEECCHHHHHHHHHHHHCCCEE-EEEECC----------HHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCE
Q ss_conf 880569815711168899999789859-997399----------899999997122112784032898999860577889
Q gi|254780716|r 3 QADIGIIGLGSMGSNLSLNILDKGFRL-AVYNKD----------FELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRK 71 (475)
Q Consensus 3 k~~IGiIGLG~MG~~mA~nL~~~G~~V-~vydr~----------~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~ 71 (475)
..+|.+-|+|+.|+..|+.|.+.|.+| .+-|.+ .+..+...+.+..........-+.+++.. -.+++
T Consensus 23 g~~vaVqGfGnVG~~~a~~l~~~GakvvavsD~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~DI 100 (217)
T cd05211 23 GLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVALGGSARVKVQDYFPGEAILG--LDVDI 100 (217)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC--CCCCE
T ss_conf 9999998988999999999998599899998578717789998699999999818965366653059865003--67768
Q ss_pred EEEECCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEEC
Q ss_conf 9997699069999999997207899899967986578999999999847994306
Q gi|254780716|r 72 ILMMVTDGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIG 126 (475)
Q Consensus 72 Iil~vp~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid 126 (475)
++-|-..+....+....| + -++|+.+.|... |.+..+.|.++||.++=
T Consensus 101 liPaAl~~~I~~~~a~~i----~-ak~I~EgAN~P~--t~ea~~iL~~rgI~viP 148 (217)
T cd05211 101 FAPCALGNVIDLENAKKL----K-AKVVAEGANNPT--TDEALRILHERGIVVAP 148 (217)
T ss_pred EEECCCCCCCCHHHHHHH----C-CEEEECCCCCCC--CHHHHHHHHHCCCEEEC
T ss_conf 964244588798999871----7-728950678998--97899999978998947
No 202
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase; InterPro: IPR006236 This group of sequences represent the long form of D-3-phosphoglycerate dehydrogenase, they include the serA gene of one pathway of serine biosynthesis. Shorter forms not in this group include SerA from Escherichia coli. ; GO: 0004617 phosphoglycerate dehydrogenase activity, 0006564 L-serine biosynthetic process.
Probab=96.50 E-value=0.026 Score=36.61 Aligned_cols=111 Identities=18% Similarity=0.257 Sum_probs=85.6
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHH--HHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHH
Q ss_conf 8056981571116889999978985999739989--99999971221127840328989998605778899997699069
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFE--LTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDP 81 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~--~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~ 81 (475)
..+|++|+|+.|..++.+...-|..+..||.--. +.+.+ ++....++.++... .+++-+-.|-.+.
T Consensus 140 ~~~g~~g~g~~g~~~~~~~~~~~~~~~~~dp~~~~~~~~~~---------g~~~~~~~~~~~~~---~d~~~~h~p~~~~ 207 (535)
T TIGR01327 140 KTLGVIGLGRIGSEVAKRAKAFGMKVLAYDPYLPPERAEKL---------GVELLADLDELLAR---ADFITLHTPLTPE 207 (535)
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHH---------CHHHHHHHHHHHHH---CCEEEEECCCCCH
T ss_conf 20001112301146766544312046752565663346550---------21333207888632---4535763366602
Q ss_pred HHHHHH-HHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEEC
Q ss_conf 999999-997207899899967986578999999999847994306
Q gi|254780716|r 82 VDQLID-KLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIG 126 (475)
Q Consensus 82 v~~vi~-~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid 126 (475)
+...+. +-+..++++-++++|.....-+.....+.+....+.-..
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~l~~~~~~g~~~~~~ 253 (535)
T TIGR01327 208 TKGLIGAEELAKLKPGVIIVNCARGGLIDEAALYEALEEGHVGGAA 253 (535)
T ss_pred HHHHCCHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHCCCHHHHE
T ss_conf 3321032566640476069850346632068899876313100100
No 203
>PRK06181 short chain dehydrogenase; Provisional
Probab=96.48 E-value=0.033 Score=35.79 Aligned_cols=77 Identities=17% Similarity=0.323 Sum_probs=57.4
Q ss_pred CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHH
Q ss_conf 57111688999997898599973998999999971221127840328989998605778899997699069999999997
Q gi|254780716|r 11 LGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQLIDKLK 90 (475)
Q Consensus 11 LG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi~~l~ 90 (475)
-.-+|..+|+.|+++|++|.+.+|++++.+++.++....+..+. .+-.-|.+.+.++++++.+.
T Consensus 10 ssGIG~a~A~~la~~Ga~vvl~~r~~~~l~~~~~~l~~~g~~~~----------------~~~~Dvs~~~~~~~~~~~~~ 73 (263)
T PRK06181 10 SEGIGRALAVRLARAGARLVLAARNEERLASLAQELANYGAEAL----------------VVATDVSDAEACERLIEAAV 73 (263)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEE----------------EEEECCCCHHHHHHHHHHHH
T ss_conf 01999999999998799899998899999999999995499679----------------99807999999999999999
Q ss_pred HCCCCCCEEEECC
Q ss_conf 2078998999679
Q gi|254780716|r 91 PLLSPEDILLDGG 103 (475)
Q Consensus 91 ~~l~~g~iiID~s 103 (475)
....+=|++|...
T Consensus 74 ~~~G~iDiLVNNA 86 (263)
T PRK06181 74 AHFGGIDILVNNA 86 (263)
T ss_pred HHHCCCCEEEECC
T ss_conf 9829964899878
No 204
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.48 E-value=0.047 Score=34.70 Aligned_cols=71 Identities=18% Similarity=0.168 Sum_probs=41.5
Q ss_pred EEEEEE-CCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEE
Q ss_conf 056981-57111688999997898--599973998999999971221127840328989998605778899997
Q gi|254780716|r 5 DIGIIG-LGSMGSNLSLNILDKGF--RLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMM 75 (475)
Q Consensus 5 ~IGiIG-LG~MG~~mA~nL~~~G~--~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~ 75 (475)
+|++|| .|+.|..+|..|..+|. ++..+|.+..+.+.+-=.+......+.++....+..++++..++|++.
T Consensus 2 KV~IIGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~g~a~DL~h~~~~~~v~~~~~~~~~~~~l~daDiVVit 75 (310)
T cd01337 2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVAADLSHINTPAKVTGYLGPEELKKALKGADVVVIP 75 (310)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCCCCEEEEECCCCHHHHHCCCCEEEEC
T ss_conf 89999999818999999997299977699982774266755321656568512570887466774799999987
No 205
>PRK08223 hypothetical protein; Validated
Probab=96.48 E-value=0.026 Score=36.62 Aligned_cols=137 Identities=15% Similarity=0.162 Sum_probs=80.7
Q ss_pred CCCEEEEEECCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHC-CCCC-CCCEECCCHHHHHHHCCCCCEEEEECCC
Q ss_conf 988056981571116889999978985-999739989999999712-2112-7840328989998605778899997699
Q gi|254780716|r 2 KQADIGIIGLGSMGSNLSLNILDKGFR-LAVYNKDFELTDVFIKKI-SGLS-QKVIVTKNLEQMVEAVCKPRKILMMVTD 78 (475)
Q Consensus 2 ~k~~IGiIGLG~MG~~mA~nL~~~G~~-V~vydr~~~~~~~l~~~~-~~~~-~~~~~~~s~~e~v~~l~~pr~Iil~vp~ 78 (475)
.++.|.+||+|-.|++.|..|++.|+- +.+-|.+.=....+..+. .... -+-.-+...++.+..++ |.+-+...+.
T Consensus 26 ~~s~VlVvG~GGlGs~~a~~LAraGVG~i~lvD~D~velSNLnRQi~~~~~diG~~Kveva~e~l~~IN-P~v~V~~~~~ 104 (287)
T PRK08223 26 RNSRVAIAGLGGVGGVHLLTLARLGIGKFNIADFDVFELVNSNRQYGAMMSSNGRPKVEVMREIALDIN-PELEIRAFPE 104 (287)
T ss_pred HCCCEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHCCCHHHCCCCHHHHHHHHHHHHC-CCCEEEEECC
T ss_conf 559689993675579999999982897599974998463440222344743449858999999999869-8987999587
Q ss_pred HHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHH-HHHHHHCCCCEECCCCCCCCCCCCCCC-EEEEECC
Q ss_conf 06999999999720789989996798657899999-999984799430675467600035684-3788454
Q gi|254780716|r 79 GDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIR-SLQLSEKGIYFIGIGVSGGVKGARSGA-SLMVGGN 147 (475)
Q Consensus 79 g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~-~~~l~~kgi~fid~pVSGG~~gA~~G~-slMvGG~ 147 (475)
. ...+-+++++ +.-|+|||++-.+--+++.. ...|...|+-++-+++-|-+. -. .+++||.
T Consensus 105 ~-lt~~N~~~~l---~~~DvVvDg~DnF~~~tR~ll~~ac~~~giP~v~~a~l~f~g----q~~vF~P~g~ 167 (287)
T PRK08223 105 G-IGKENLDTFL---DGVDVYVDGLDFFVFDIRRLLFREAQARGIPALTAAPLGFST----AWLVFDPGGM 167 (287)
T ss_pred C-CCHHHHHHHH---HCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCC----EEEEECCCCC
T ss_conf 8-9989999998---679999979667883189999999998599849831541030----6999889997
No 206
>PRK03803 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.48 E-value=0.093 Score=32.50 Aligned_cols=122 Identities=15% Similarity=0.164 Sum_probs=67.4
Q ss_pred EEEEECCHHHHHHHHHHHHCCCEEEEEECCH--HHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEE--CCCHH-
Q ss_conf 5698157111688999997898599973998--999999971221127840328989998605778899997--69906-
Q gi|254780716|r 6 IGIIGLGSMGSNLSLNILDKGFRLAVYNKDF--ELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMM--VTDGD- 80 (475)
Q Consensus 6 IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~--~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~--vp~g~- 80 (475)
.=++|+|.-|.+.|+-|.++|++|.+||... ...+.+.++.... .+..-....+. +..++.|+.+ +|...
T Consensus 10 ~LV~G~G~sG~s~a~~L~~~G~~V~~~D~~~~~~~~~~~~~~~~~i--~~~~g~~~~~~---~~~~d~vv~SPgI~~~~p 84 (448)
T PRK03803 10 RIVVGLGKSGMSLVRFLARQGYQFAVTDTRENPPELATLRRDYPQV--EVRCGELDAEF---LCQAEEIIVSPGLALATP 84 (448)
T ss_pred EEEEEECHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCC--EEEECCCCHHH---HCCCCEEEECCCCCCCCH
T ss_conf 8999989999999999997889599991899916799999747997--79978889778---078999998997299999
Q ss_pred HHHHHHH---------HHHHCCCCCCEEEECCCCCHH-HHHHHHHHHHHCCCCEECCCCCCC
Q ss_conf 9999999---------997207899899967986578-999999999847994306754676
Q gi|254780716|r 81 PVDQLID---------KLKPLLSPEDILLDGGNSHFC-DTQIRSLQLSEKGIYFIGIGVSGG 132 (475)
Q Consensus 81 ~v~~vi~---------~l~~~l~~g~iiID~sts~~~-~t~~~~~~l~~kgi~fid~pVSGG 132 (475)
.+....+ +++....+..+|--+||..-. .|.-.+..+++.|....-+|-.|.
T Consensus 85 ~~~~a~~~~i~i~~e~el~~~~~~~~~IaVTGTnGKTTTtsli~~iL~~~g~~~~~gGNiG~ 146 (448)
T PRK03803 85 ALQAAAAAGIKISGDIELFARAAKAPIVAITGSNAKSTVTTLVGEMAKAAGKRVAVGGNLGT 146 (448)
T ss_pred HHHHHHHCCCCEECHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCC
T ss_conf 99999985996831999986217898899858998388999999999865983799403276
No 207
>PRK07775 short chain dehydrogenase; Provisional
Probab=96.44 E-value=0.038 Score=35.34 Aligned_cols=78 Identities=19% Similarity=0.365 Sum_probs=56.9
Q ss_pred ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHH
Q ss_conf 15711168899999789859997399899999997122112784032898999860577889999769906999999999
Q gi|254780716|r 10 GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQLIDKL 89 (475)
Q Consensus 10 GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi~~l 89 (475)
|-+-+|..+|+.|++.|++|.+..|+.++.+++.++.......+. .+-+-|.+.+.+++.++.+
T Consensus 18 AssGIG~aiA~~la~~G~~V~l~~R~~e~l~~~~~~l~~~g~~~~----------------~~~~Dvtd~~~v~~~v~~~ 81 (275)
T PRK07775 18 ASSGIGAATAIELAAHGFPVALGARRVEKCEEIVDKIRADGGEAV----------------AFPLDVTDPDSVKSFVAQA 81 (275)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEE----------------EEEECCCCHHHHHHHHHHH
T ss_conf 235999999999998799899998989999999999996499489----------------9991289999999999999
Q ss_pred HHCCCCCCEEEECC
Q ss_conf 72078998999679
Q gi|254780716|r 90 KPLLSPEDILLDGG 103 (475)
Q Consensus 90 ~~~l~~g~iiID~s 103 (475)
...+.+=|++|...
T Consensus 82 ~~~~G~iDiLVnNA 95 (275)
T PRK07775 82 TEALGDIEVLVSGA 95 (275)
T ss_pred HHHHCCCCEEEECC
T ss_conf 99859965999767
No 208
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=96.43 E-value=0.018 Score=37.79 Aligned_cols=117 Identities=18% Similarity=0.126 Sum_probs=53.9
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHHCCCCCCEE-EECCCCCHHHHHHHHHHHHHCCCCE--ECCCCCCCCCCCCC---C-
Q ss_conf 788999976-99069999999997207899899-9679865789999999998479943--06754676000356---8-
Q gi|254780716|r 68 KPRKILMMV-TDGDPVDQLIDKLKPLLSPEDIL-LDGGNSHFCDTQIRSLQLSEKGIYF--IGIGVSGGVKGARS---G- 139 (475)
Q Consensus 68 ~pr~Iil~v-p~g~~v~~vi~~l~~~l~~g~ii-ID~sts~~~~t~~~~~~l~~kgi~f--id~pVSGG~~gA~~---G- 139 (475)
..++|...= |..+...+.++++.. ..+||+ |-+.-.++.|..++.+..+...... +.||--|-...-++ |
T Consensus 103 ~tkiI~S~H~~~~~~l~~~~~~~~~--~~aDivKia~~A~~~~D~~~l~~~~~~~~~p~Iai~MGe~G~lSRiL~~~~g~ 180 (477)
T PRK09310 103 KIKIILSYHTSEHEDIPQLYNEMLA--SQADYYKIAVSSTSSTDLLNIIQQKRSLPENTTVLCMGNHGIPSRILSPLLQN 180 (477)
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHH--HCCCEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCCC
T ss_conf 9779998249983039999999986--07998999840387778999999997289986999717787021000022267
Q ss_pred CE-E--EEECCHH-----HHHHHH-HHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHH
Q ss_conf 43-7--8845489-----998889-9999875015678618985698746789887767
Q gi|254780716|r 140 AS-L--MVGGNEK-----AYNRVE-NILLSISAKYQNSPCCALLGPDGSGHFVKMIHNG 189 (475)
Q Consensus 140 ~s-l--MvGG~~~-----~~~~~~-piL~~iaak~~~~~cv~y~G~~GsGh~vKMVhNg 189 (475)
+. . +..+++. +++++. --+..+..+ .+-+.-+|.+=+-..-=.+||.
T Consensus 181 ~~t~a~~~~~~~~aPGQ~t~~~l~~y~~~~~~~~---tk~fgviG~PI~HS~SP~lHN~ 236 (477)
T PRK09310 181 AFNYAAGIGAPPVAPGQLSLEHLLFYNYANLSAQ---SHIYGLIGDPVDRSISHLSHNP 236 (477)
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC---CCEEEEECCCHHHCCCHHHHHH
T ss_conf 6412455566668988777999998776056856---7489998176231338999999
No 209
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=96.42 E-value=0.041 Score=35.14 Aligned_cols=82 Identities=20% Similarity=0.400 Sum_probs=59.8
Q ss_pred EEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 5698--15711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 6 IGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 6 IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
+.+| |-+-+|.++|+.|++.|.+|.+.||+.++.++++++.......+. .+-.-|.+.+.++
T Consensus 12 valVTGas~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~l~~~g~~~~----------------~~~~Dvtd~~~v~ 75 (278)
T PRK08277 12 VAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVEEIKANGGEAI----------------ALKADVLDKESLE 75 (278)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEE----------------EEECCCCCHHHHH
T ss_conf 899958674899999999998799899997988999999999984599099----------------9982489999999
Q ss_pred HHHHHHHHCCCCCCEEEECC
Q ss_conf 99999972078998999679
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~s 103 (475)
++++.+.....+=|++|...
T Consensus 76 ~~~~~~~~~~G~iDiLVNnA 95 (278)
T PRK08277 76 QARQQILKDFGRCDILINGA 95 (278)
T ss_pred HHHHHHHHHHCCCCEEEECC
T ss_conf 99999999849988899889
No 210
>PRK07024 short chain dehydrogenase; Provisional
Probab=96.42 E-value=0.083 Score=32.88 Aligned_cols=83 Identities=16% Similarity=0.246 Sum_probs=60.6
Q ss_pred CCCCEEEEEECC-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCH
Q ss_conf 998805698157-1116889999978985999739989999999712211278403289899986057788999976990
Q gi|254780716|r 1 MKQADIGIIGLG-SMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDG 79 (475)
Q Consensus 1 M~k~~IGiIGLG-~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g 79 (475)
|++ +|=+.|-. -+|..+|+.|+++|++|.+.+|+.++.+++.++... ..+ ..+-+-|.+.
T Consensus 1 M~~-~VlITGassGIG~a~A~~la~~G~~v~l~~R~~~~L~~~~~~~~~--~~~----------------~~~~~Dv~d~ 61 (256)
T PRK07024 1 MPL-KVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPK--ARV----------------SVYAADVRDA 61 (256)
T ss_pred CCC-EEEEECCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCC--CCE----------------EEEEECCCCH
T ss_conf 999-899984602999999999998899899998988999999997679--976----------------9998117999
Q ss_pred HHHHHHHHHHHHCCCCCCEEEEC
Q ss_conf 69999999997207899899967
Q gi|254780716|r 80 DPVDQLIDKLKPLLSPEDILLDG 102 (475)
Q Consensus 80 ~~v~~vi~~l~~~l~~g~iiID~ 102 (475)
+.++++++.+......-|++|..
T Consensus 62 ~~~~~~~~~~~~~~g~iDilinN 84 (256)
T PRK07024 62 DALAAAAADFIAAHGCPDVVIAN 84 (256)
T ss_pred HHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 99999999999983998799988
No 211
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=96.42 E-value=0.1 Score=32.24 Aligned_cols=120 Identities=15% Similarity=0.120 Sum_probs=93.3
Q ss_pred CCEEEEEEC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHH
Q ss_conf 880569815-7111688999997898599973998999999971221127840328989998605778899997699069
Q gi|254780716|r 3 QADIGIIGL-GSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDP 81 (475)
Q Consensus 3 k~~IGiIGL-G~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~ 81 (475)
++.|-+.|+ |.-|+--++++.+-|.+|.+- .+|.| +......+..+++++|.++.. .++.-++.||+..+
T Consensus 8 ~trv~vqGiTG~~g~~h~~~m~~yGT~iVaG-VtPgk-------gG~~~~gvPVf~tV~eAv~~~-~~d~svIfVPp~~a 78 (289)
T PRK05678 8 DTKVIVQGITGKQGTFHTEQMLAYGTKIVGG-VTPGK-------GGTTHLGLPVFNTVKEAVEAT-GATASVIYVPPPFA 78 (289)
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHCCCEEEE-ECCCC-------CCEEEECCCCCCCHHHHHHHC-CCCEEEEEECHHHH
T ss_conf 9839998788837779999999868956999-77997-------851765833306599998612-88869997078999
Q ss_pred HHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCC
Q ss_conf 9999999972078998999679865789999999998479943067546760
Q gi|254780716|r 82 VDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGV 133 (475)
Q Consensus 82 v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~ 133 (475)
.|.+++-+-..+ ..+++-+--....|+.+..+.++++|.+.++.---|--
T Consensus 79 ~dAi~EAi~agI--~~iV~ITEgiP~~D~~~i~~~a~~~g~riIGPNc~GiI 128 (289)
T PRK05678 79 ADAILEAIDAGI--DLIVCITEGIPVLDMLEVKRYLKGKKTRLIGPNCPGII 128 (289)
T ss_pred HHHHHHHHHCCC--CEEEEECCCCCHHHHHHHHHHHHHCCCEEECCCCCEEE
T ss_conf 999999986799--88999438997888999999873079889889997016
No 212
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=96.40 E-value=0.048 Score=34.62 Aligned_cols=82 Identities=18% Similarity=0.260 Sum_probs=60.4
Q ss_pred EEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 5698--15711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 6 IGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 6 IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
+.+| |-+-+|.++|+.|++.|.+|.+.||+.++.++.+++.......+ ..+..-+.+.+.++
T Consensus 12 ~alVTG~s~GIG~aiA~~la~~Ga~Vii~~~~~~~~~~~~~~~~~~g~~~----------------~~~~~Dvt~~~~v~ 75 (265)
T PRK07097 12 IALITGASYGIGFAIAKAYAEAGATIVFNDIKQELVDKGLAAYRELGIEA----------------HGYVCDVTDEDGIQ 75 (265)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCE----------------EEEEECCCCHHHHH
T ss_conf 89995857689999999999869999999599899999999999549917----------------99993289999999
Q ss_pred HHHHHHHHCCCCCCEEEECC
Q ss_conf 99999972078998999679
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~s 103 (475)
++++.+...+..=|++|...
T Consensus 76 ~~~~~~~~~~g~iDiLVnNA 95 (265)
T PRK07097 76 AMVAQIEKEVGVIDILVNNA 95 (265)
T ss_pred HHHHHHHHHCCCCCEEEECC
T ss_conf 99999999829998999899
No 213
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=96.39 E-value=0.029 Score=36.24 Aligned_cols=120 Identities=17% Similarity=0.226 Sum_probs=69.5
Q ss_pred CCCEEEEEECCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHCCCC-CCCCEECCCHHHHHHHCCCCCEEEEECCCH
Q ss_conf 98805698157111688999997898-5999739989999999712211-278403289899986057788999976990
Q gi|254780716|r 2 KQADIGIIGLGSMGSNLSLNILDKGF-RLAVYNKDFELTDVFIKKISGL-SQKVIVTKNLEQMVEAVCKPRKILMMVTDG 79 (475)
Q Consensus 2 ~k~~IGiIGLG~MG~~mA~nL~~~G~-~V~vydr~~~~~~~l~~~~~~~-~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g 79 (475)
++++|-+||+|-.|.+.|..|++.|. ++.+.|.+.=....+..+.-.. .-+-.-+...++....++ |.+-+..++.-
T Consensus 26 ~~s~VlivG~GGLG~~~a~~La~aGVG~i~lvD~D~Ve~SNL~RQ~~~~~diG~~Ka~~a~~~l~~iN-p~v~I~~~~~~ 104 (209)
T PRK08644 26 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMFKVEALKENLLRIN-PFVKIEVHQVK 104 (209)
T ss_pred HCCCEEEECCCHHHHHHHHHHHHHCCCEEEEEECCEECCCCCCCCCCCHHHCCCCHHHHHHHHHHHHC-CCEEEEEEECC
T ss_conf 62968998887889999999999389818998899901541103756787759756999999987448-98289997224
Q ss_pred HHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHH-HCCCCEECC
Q ss_conf 699999999972078998999679865789999999998-479943067
Q gi|254780716|r 80 DPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLS-EKGIYFIGI 127 (475)
Q Consensus 80 ~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~-~kgi~fid~ 127 (475)
...+-+.++ ++.-|+||||+-. +..-..+.+.+. ..++-++.+
T Consensus 105 -l~~~n~~~l---~~~~DiViDctDN-~~tR~li~~~c~~~~~~plV~a 148 (209)
T PRK08644 105 -IDEDNIEEL---FKDCDIVVEAFDN-AETKAMLVETVLEKKGKKVVSA 148 (209)
T ss_pred -CCHHHHHHH---HHCCCEEEECCCC-HHHHHHHHHHHHHHCCCCEEEE
T ss_conf -898999999---8579999999999-9999999999999779968999
No 214
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.39 E-value=0.093 Score=32.52 Aligned_cols=84 Identities=21% Similarity=0.326 Sum_probs=62.1
Q ss_pred CCCCEEEEE-EC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCC
Q ss_conf 998805698-15-7111688999997898599973998999999971221127840328989998605778899997699
Q gi|254780716|r 1 MKQADIGII-GL-GSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTD 78 (475)
Q Consensus 1 M~k~~IGiI-GL-G~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~ 78 (475)
|+..++-+| |- .=+|..+|+.|+++|++|.+..|+.++.+++.+.... .. ..+.+-|.+
T Consensus 1 M~~~KvvlITGassGIG~aiA~~l~~~G~~Vi~~~R~~~~l~~l~~~~~~---~~----------------~~~~~Dvtd 61 (277)
T PRK06180 1 MASMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSAAARRDFEALHPG---RA----------------LARVLDVTD 61 (277)
T ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCC---CE----------------EEEEEECCC
T ss_conf 99998899917873999999999998799999998999999999986799---57----------------999983799
Q ss_pred HHHHHHHHHHHHHCCCCCCEEEECC
Q ss_conf 0699999999972078998999679
Q gi|254780716|r 79 GDPVDQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 79 g~~v~~vi~~l~~~l~~g~iiID~s 103 (475)
.+.++++++.+.....+=|++|...
T Consensus 62 ~~~v~~~v~~~~~~~G~iDvLVNNA 86 (277)
T PRK06180 62 FDAIDGVVADAEATVGPIDVLVNNA 86 (277)
T ss_pred HHHHHHHHHHHHHHHCCCCEEEECC
T ss_conf 9999999999999819986999899
No 215
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.39 E-value=0.044 Score=34.92 Aligned_cols=81 Identities=20% Similarity=0.332 Sum_probs=58.5
Q ss_pred EEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 5698--15711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 6 IGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 6 IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
+.+| |-+-+|..+|+.|++.|.+|.+.+|+.++.+++.++-......+ ..+-.-|.+.+.++
T Consensus 5 ~alVTGgs~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~i~~~g~~~----------------~~~~~Dv~~~~~v~ 68 (254)
T PRK07677 5 VVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQV----------------LTVQMDVRNPDDVQ 68 (254)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCE----------------EEEECCCCCHHHHH
T ss_conf 89995876789999999999879999999699999999999998569909----------------99980389999999
Q ss_pred HHHHHHHHCCCCCCEEEEC
Q ss_conf 9999997207899899967
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDG 102 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~ 102 (475)
.+++.+......=|++|..
T Consensus 69 ~~v~~~~~~~g~iDiLVnN 87 (254)
T PRK07677 69 KMIEQIDEKFGRIDALINN 87 (254)
T ss_pred HHHHHHHHHHCCCCEEEEC
T ss_conf 9999999983998889975
No 216
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=96.38 E-value=0.037 Score=35.49 Aligned_cols=13 Identities=15% Similarity=0.056 Sum_probs=5.5
Q ss_pred EEECCHHHHHHHH
Q ss_conf 9739989999999
Q gi|254780716|r 31 VYNKDFELTDVFI 43 (475)
Q Consensus 31 vydr~~~~~~~l~ 43 (475)
.++..++..++++
T Consensus 41 ~~~v~~~~l~~~~ 53 (288)
T PRK12749 41 AFEVDNDSFPGAI 53 (288)
T ss_pred EEECCHHHHHHHH
T ss_conf 8877888899999
No 217
>PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.36 E-value=0.11 Score=32.01 Aligned_cols=121 Identities=14% Similarity=0.162 Sum_probs=65.4
Q ss_pred CCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECC--HHHHHHHHHHCCCCCCCCE-ECCCHHHHHHHCCCCCEEEEE--C
Q ss_conf 9880569815711168899999789859997399--8999999971221127840-328989998605778899997--6
Q gi|254780716|r 2 KQADIGIIGLGSMGSNLSLNILDKGFRLAVYNKD--FELTDVFIKKISGLSQKVI-VTKNLEQMVEAVCKPRKILMM--V 76 (475)
Q Consensus 2 ~k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~--~~~~~~l~~~~~~~~~~~~-~~~s~~e~v~~l~~pr~Iil~--v 76 (475)
++++|-++|+|.=|.+.|+-|.+.|++|.++|.. ++..+.+.+++... .+. +..+. +. ++..+.|+.+ +
T Consensus 6 ~~k~vlV~GlG~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~~l~~~~~~~--~~~~g~~~~-~~---~~~~d~vV~SPGI 79 (501)
T PRK02006 6 QRPMVLVLGLGESGLAMARWCARHGCRLRVADTREAPPNLAALQAEGIDA--EFVGGAFDP-AL---LDGVELVALSPGL 79 (501)
T ss_pred CCCEEEEEEECHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHCCCCC--EEECCCCCH-HH---HCCCCEEEECCEE
T ss_conf 89839998336889999999997898499998999986199998608981--897788986-78---4689999989900
Q ss_pred C-CHHHHHHHH-----------H------HHHHCCCC-----CCEE-EECCCCCHHHHHHHHHHHHHCCCCEECCC
Q ss_conf 9-906999999-----------9------99720789-----9899-96798657899999999984799430675
Q gi|254780716|r 77 T-DGDPVDQLI-----------D------KLKPLLSP-----EDIL-LDGGNSHFCDTQIRSLQLSEKGIYFIGIG 128 (475)
Q Consensus 77 p-~g~~v~~vi-----------~------~l~~~l~~-----g~ii-ID~sts~~~~t~~~~~~l~~kgi~fid~p 128 (475)
| ..+.+..++ . ..++.+.. ..+| |-+||---..|.-.+..|+..|....-+|
T Consensus 80 ~p~~p~~~~~l~~A~~~gi~i~~eiel~~~~~~~~~~~~~~~~~iIaVTGTnGKTTTt~li~~iL~~~g~~~~~~G 155 (501)
T PRK02006 80 SPLEPALAALLAAARERGIPVWGELELFAQALAALGASRGYAPKVLAITGTNGKTTTTSLTGLLCERAGKKVAVAG 155 (501)
T ss_pred CCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 8888543199999998799587689999988763022235687489993899668799999999997699746525
No 218
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=96.33 E-value=0.071 Score=33.36 Aligned_cols=100 Identities=22% Similarity=0.273 Sum_probs=60.5
Q ss_pred EEEEECCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHCC---C-CC--CCCEECCCHHHHHHHCCCCCEEEEECCC
Q ss_conf 5698157111688999997898-59997399899999997122---1-12--7840328989998605778899997699
Q gi|254780716|r 6 IGIIGLGSMGSNLSLNILDKGF-RLAVYNKDFELTDVFIKKIS---G-LS--QKVIVTKNLEQMVEAVCKPRKILMMVTD 78 (475)
Q Consensus 6 IGiIGLG~MG~~mA~nL~~~G~-~V~vydr~~~~~~~l~~~~~---~-~~--~~~~~~~s~~e~v~~l~~pr~Iil~vp~ 78 (475)
|++||.|..|..+|..|+.+|. ++..+|+++++++..+.... . .. ..+.+..+.++ ++..++|+++--.
T Consensus 1 V~IIGaG~VG~~~a~~l~~~~~~el~L~D~~~~~a~g~a~DL~~~~~~~~~~~~v~~~~d~~~----~~daDvvVitaG~ 76 (300)
T cd01339 1 ISIIGAGNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKVTGTNDYED----IAGSDVVVITAGI 76 (300)
T ss_pred CEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHH----HCCCCEEEEECCC
T ss_conf 989896888999999998579967999809998005798877613201589858994788799----4799899990677
Q ss_pred ----H-----------HHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHH
Q ss_conf ----0-----------699999999972078998999679865789999
Q gi|254780716|r 79 ----G-----------DPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQI 112 (475)
Q Consensus 79 ----g-----------~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~ 112 (475)
| +.+.++...+..+- |..+++-.+ +|-|+.-
T Consensus 77 ~~k~g~tR~dLl~~N~~I~~~i~~~i~~~~-p~~i~lvvs--NPvDv~t 122 (300)
T cd01339 77 PRKPGMSRDDLLGTNAKIVKEVAENIKKYA-PNAIVIVVT--NPLDVMT 122 (300)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCCEEEECC--CCHHHHH
T ss_conf 899899889999988999999999999659-984899827--9389999
No 219
>PRK07774 short chain dehydrogenase; Provisional
Probab=96.33 E-value=0.047 Score=34.69 Aligned_cols=82 Identities=18% Similarity=0.291 Sum_probs=60.8
Q ss_pred EEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 5698--15711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 6 IGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 6 IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
+.+| |-+-+|..+|+.|++.|.+|.+.||++++.++..++-........ .+-.-|.+.+.++
T Consensus 8 ~alVTGgs~GiG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~i~~~g~~~~----------------~~~~Dv~~~~~v~ 71 (250)
T PRK07774 8 VAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAI----------------AVQVDVSDPDSAK 71 (250)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEE----------------EEECCCCCHHHHH
T ss_conf 899979768899999999998699999997988999999999985598499----------------9982589999999
Q ss_pred HHHHHHHHCCCCCCEEEECC
Q ss_conf 99999972078998999679
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~s 103 (475)
+.++........=|++|...
T Consensus 72 ~~~~~~~~~fG~iDilVNnA 91 (250)
T PRK07774 72 AMADRTVSAFGGIDYLVNNA 91 (250)
T ss_pred HHHHHHHHHHCCCCEEEECC
T ss_conf 99999999839998999888
No 220
>PRK06346 consensus
Probab=96.32 E-value=0.045 Score=34.85 Aligned_cols=83 Identities=16% Similarity=0.325 Sum_probs=61.1
Q ss_pred EEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 5698--15711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 6 IGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 6 IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
+-+| |-+-+|..+|+.|++.|.+|.+.||+.++.+++.++.......+ ..+..-|.+.+.++
T Consensus 7 v~lITGgs~GIG~a~a~~la~~Ga~V~i~~r~~e~~~~~~~~l~~~~~~~----------------~~~~~Dv~~~~~v~ 70 (251)
T PRK06346 7 VAIVTGAASGMGKSIAELFAKEGAKVVVADLNLERAQKVVEEITSNGGTA----------------IAVVANVTKQEDIE 70 (251)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEE----------------EEEECCCCCHHHHH
T ss_conf 89994757889999999999879989999798999999999999639908----------------99977889899999
Q ss_pred HHHHHHHHCCCCCCEEEECCC
Q ss_conf 999999720789989996798
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDGGN 104 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~st 104 (475)
.++++......+=|++|...-
T Consensus 71 ~~i~~~~~~fg~iDiLVnNAg 91 (251)
T PRK06346 71 NMVDTAVDTYGTLDILVNNAG 91 (251)
T ss_pred HHHHHHHHHCCCCCEEEECCC
T ss_conf 999999998299979998998
No 221
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=96.31 E-value=0.06 Score=33.94 Aligned_cols=82 Identities=10% Similarity=0.257 Sum_probs=60.2
Q ss_pred EEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 5698--15711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 6 IGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 6 IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
+.+| |-+-+|..+|+.|++.|.+|.+.+|++++.++..++.......+ ..+..-|.+.+.++
T Consensus 16 ~alITGgs~GIG~~ia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~g~~~----------------~~~~~Dv~~~~~v~ 79 (259)
T PRK06124 16 VALVTGSARGLGLEIARALAEAGAHVLVNGRNAARVEAAVAALRAAGGAA----------------EALVFDISDEEAVA 79 (259)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCE----------------EEEEECCCCHHHHH
T ss_conf 89992867489999999999879999999698899999999999659958----------------99995179999999
Q ss_pred HHHHHHHHCCCCCCEEEECC
Q ss_conf 99999972078998999679
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~s 103 (475)
+.++.+......=|++|...
T Consensus 80 ~~~~~~~~~~g~iDiLVnnA 99 (259)
T PRK06124 80 AAFARIDAEHGRLDILVNNV 99 (259)
T ss_pred HHHHHHHHHCCCCCEEEECC
T ss_conf 99999999759997999898
No 222
>COG5495 Uncharacterized conserved protein [Function unknown]
Probab=96.31 E-value=0.11 Score=31.83 Aligned_cols=181 Identities=14% Similarity=0.177 Sum_probs=92.0
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEE-EEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 805698157111688999997898599-9739989999999712211278403289899986057788999976990699
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLA-VYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~-vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
..|||||.|..|.....+-.+.++... +-.|++.+++.+.+... ..+.|+..+.+.-..++..+|+. ..
T Consensus 11 ~~v~~igtGrl~ra~~~ra~h~~~~cs~i~srS~~~a~~LaE~~~---------a~p~d~~~~ael~~~vfv~vpd~-~~ 80 (289)
T COG5495 11 VVVGIVGTGRLGRAALLRADHVVVACSAISSRSRDRAQNLAETYV---------APPLDVAKSAELLLLVFVDVPDA-LY 80 (289)
T ss_pred EEEEEEECCHHHHHHHHHHHHHHEEEHHHHHCCHHHHHHHHHHCC---------CCCCCHHHCHHHHCEEEECCCHH-HH
T ss_conf 588876044278999987400321211343217899862044217---------99510120734515478626088-88
Q ss_pred HHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCE----ECCCCCCCCCCCC--CCCEEEE-ECCHHHHHHHH
Q ss_conf 999999972078998999679865789999999998479943----0675467600035--6843788-45489998889
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYF----IGIGVSGGVKGAR--SGASLMV-GGNEKAYNRVE 155 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~f----id~pVSGG~~gA~--~G~slMv-GG~~~~~~~~~ 155 (475)
-.|... ..-.||.|++-||-..-. .+-+.+...|.-- --+--||-++.+. .+..+.+ -+|+--|..++
T Consensus 81 ~~vaa~--~~~rpg~iv~HcSga~~~---~il~~~gr~g~~~asiHP~f~Fsgl~edl~rl~d~~~~i~eaD~~g~ai~~ 155 (289)
T COG5495 81 SGVAAT--SLNRPGTIVAHCSGANGS---GILAPLGRQGCIPASIHPAFSFSGLDEDLSRLKDTIFGITEADDVGYAIVQ 155 (289)
T ss_pred HHHHHH--CCCCCCEEEEECCCCCCH---HHHHHHHHCCCCCCEECCCHHCCCCHHHHHHCCCCEEEEECCCCCCCHHHH
T ss_conf 888876--046898389974688740---454254215875300052110368888998654347865305655528999
Q ss_pred HHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHC
Q ss_conf 999987501567861898569874678988776787888---999899999999642
Q gi|254780716|r 156 NILLSISAKYQNSPCCALLGPDGSGHFVKMIHNGIEYAN---MQLIADIYGILRDSL 209 (475)
Q Consensus 156 piL~~iaak~~~~~cv~y~G~~GsGh~vKMVhNgIey~~---mq~iaE~~~~l~~~~ 209 (475)
.+-..|+ ++|.|. +.+. -|+.|-+--|+- .-+++|+..+.+-.+
T Consensus 156 ~la~emg----g~~f~V---~~~~---r~lYHaaa~~asnf~v~~l~~a~~i~~aag 202 (289)
T COG5495 156 SLALEMG----GEPFCV---REEA---RILYHAAAVHASNFIVTVLADALEIYRAAG 202 (289)
T ss_pred HHHHHHC----CCCEEE---CHHH---HHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
T ss_conf 9999838----984452---5567---899887777641019999998999999845
No 223
>TIGR00507 aroE shikimate 5-dehydrogenase; InterPro: IPR011342 The shikimate pathway links the metabolism of carbohydrates to the biosynthesis of aromatic compounds and is essential for the biosynthesis of aromatic amino acids and other aromatic compounds in bacteria, eukaryotic microorganisms and plants . It is a seven-step pathway which converts phosphoenolpyruvate and erythrose 4-phosphate to chorismate, the common precursor for the synthesis of folic acid, ubiquinone, vitamins E and K, and aromatic amino acids. Since this pathway is absent in metazoans, which must therefore obtain the essential amino acids phenylalanine and tryptophan from their diet, the enzymes in this pathway are important targets for the development of novel herbicides and antimicrobial compounds. This entry represents shikimate 5-dehydrogenases from prokaryotes and functionally equivalent C-terminal domains from larger, multifunctional proteins, the majority of which have an N-terminal quinate dehydrogenase domain. These multifunctional proteins occur in plants, chlamydiae, planctomycetes and a limited number of marine proteobacteria. Shikimate 5-dehydrogenase catalyses the fourth step of the shikimate pathway, which is the NADP-dependent reduction of 3-dehydroshikimate to shikimate . Structural studies suggests that some shikimate dehydrogenases are monmers while others form homodimers , . Each shikimate dehydrogenase monomer forms a compact two-domain alpha/beta sandwich with a deep interdomain cleft. The N-terminal substrate-binding domain forms a three layer alpha-beta-alpha sandwich, while the C-terminal NADP-binding domain forms a nearly typical Rossman fold. The active site is thought to be located within the interdomain cleft, with substrate binding causing a conformational change which closes the active site cleft, forming a productive active site.; GO: 0004764 shikimate 5-dehydrogenase activity, 0050661 NADP binding.
Probab=96.29 E-value=0.016 Score=38.12 Aligned_cols=120 Identities=17% Similarity=0.228 Sum_probs=81.3
Q ss_pred CCEEEEEECCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHCCC---CCCCCEECCCHHHHHHHCCC--CCEEEEEC
Q ss_conf 88056981571116889999978-98599973998999999971221---12784032898999860577--88999976
Q gi|254780716|r 3 QADIGIIGLGSMGSNLSLNILDK-GFRLAVYNKDFELTDVFIKKISG---LSQKVIVTKNLEQMVEAVCK--PRKILMMV 76 (475)
Q Consensus 3 k~~IGiIGLG~MG~~mA~nL~~~-G~~V~vydr~~~~~~~l~~~~~~---~~~~~~~~~s~~e~v~~l~~--pr~Iil~v 76 (475)
..+|-+||-|==++++|..|.+. +-+|.+.|||.+|++++++..+. ..-+-..+-+.+|+- +++ -++||=+.
T Consensus 121 ~~~~li~GAGGAa~a~a~~L~~~t~~~~~i~NRT~~ka~~La~~~~~kln~~~G~~~~~~~~~~~--l~~G~~DlIINAT 198 (286)
T TIGR00507 121 NQRVLIIGAGGAAKAVALELLKATDCNVIIANRTVEKAEELAERFQRKLNKKYGEIQAFSLDEVP--LHKGKVDLIINAT 198 (286)
T ss_pred CCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC--CCCCCEEEEEECC
T ss_conf 97799994286789999999860099789982877899999999898853424853652113355--5578567998546
Q ss_pred CCHHH--HHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCC-CCEEC
Q ss_conf 99069--9999999972078998999679865789999999998479-94306
Q gi|254780716|r 77 TDGDP--VDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKG-IYFIG 126 (475)
Q Consensus 77 p~g~~--v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kg-i~fid 126 (475)
|.|=. ++++ .=....++++.++.|+-...-.+|- .-++|+++| ..++|
T Consensus 199 s~G~~~~~~~~-~v~~~~~~~~~~v~D~~Y~p~t~Tp-fl~~Ak~~g~~~~~d 249 (286)
T TIGR00507 199 SAGMSGNIDEP-PVPAELLKEGKLVYDLVYNPLTETP-FLKEAKKRGLTKVID 249 (286)
T ss_pred CCCCCCCCCCC-CCCHHHCCCCCEEEECCCCCCCCCH-HHHHHHHCCCCCCCC
T ss_conf 77888898874-5685341688689951468865577-899998768856545
No 224
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.28 E-value=0.1 Score=32.17 Aligned_cols=82 Identities=15% Similarity=0.214 Sum_probs=61.1
Q ss_pred EEEEECCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHH
Q ss_conf 56981571-11688999997898599973998999999971221127840328989998605778899997699069999
Q gi|254780716|r 6 IGIIGLGS-MGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQ 84 (475)
Q Consensus 6 IGiIGLG~-MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~ 84 (475)
+=+-|-+. +|..+|+.|++.|.+|.+.+|+.++.+++.++-....... ..+-.-|.+.+.++.
T Consensus 12 alVTGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~i~~~g~~~----------------~~~~~Dv~~~~~v~~ 75 (258)
T PRK06949 12 ALVTGASSGLGQRFAQVLSQAGAKVVLASRRVERLKELRAEIEAEGGAA----------------HVVSLDVTDYQSIKA 75 (258)
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCE----------------EEEECCCCCHHHHHH
T ss_conf 9995857799999999999879999999698899999999999659928----------------999826899999999
Q ss_pred HHHHHHHCCCCCCEEEECC
Q ss_conf 9999972078998999679
Q gi|254780716|r 85 LIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 85 vi~~l~~~l~~g~iiID~s 103 (475)
+++.+...+.+=||+|...
T Consensus 76 ~v~~~~~~~G~iDiLVnnA 94 (258)
T PRK06949 76 AVAHAETEAGTIDILVNNS 94 (258)
T ss_pred HHHHHHHHHCCCCEEEECC
T ss_conf 9999999849998999899
No 225
>PRK07890 short chain dehydrogenase; Provisional
Probab=96.28 E-value=0.058 Score=34.00 Aligned_cols=83 Identities=18% Similarity=0.319 Sum_probs=61.3
Q ss_pred EEEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 05698--1571116889999978985999739989999999712211278403289899986057788999976990699
Q gi|254780716|r 5 DIGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 5 ~IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
++.+| |-+-+|..+|+.|++.|.+|.+.+|+.++.++..++-......+. .+-.-|.+.+.+
T Consensus 6 K~alVTG~s~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~i~~~g~~~~----------------~~~~Dv~~~~~~ 69 (258)
T PRK07890 6 KVVVVSGVGPGLGTTLAVRAAREGADVVLAARTAERLDEVAKQIDDLGRRAL----------------AVVTDITDEAQV 69 (258)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEE----------------EEECCCCCHHHH
T ss_conf 8899968565899999999998799899997989999999999996499589----------------998169999999
Q ss_pred HHHHHHHHHCCCCCCEEEECC
Q ss_conf 999999972078998999679
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~s 103 (475)
+++++.+......=|++|...
T Consensus 70 ~~~v~~~~~~fG~iDiLVnnA 90 (258)
T PRK07890 70 ANLVDAALERFGRVDVLVNNA 90 (258)
T ss_pred HHHHHHHHHHHCCCCEEEECC
T ss_conf 999999999849998999868
No 226
>PRK06482 short chain dehydrogenase; Provisional
Probab=96.28 E-value=0.11 Score=32.09 Aligned_cols=82 Identities=21% Similarity=0.314 Sum_probs=60.4
Q ss_pred CCCCEEEEE-E-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCC
Q ss_conf 998805698-1-57111688999997898599973998999999971221127840328989998605778899997699
Q gi|254780716|r 1 MKQADIGII-G-LGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTD 78 (475)
Q Consensus 1 M~k~~IGiI-G-LG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~ 78 (475)
|+| +-|| | -+-+|..+|+.++++|+.|.+..|++++.+++.+... .++ .++-+-|.+
T Consensus 1 M~K--v~lITGaSsGiG~ala~~l~~~G~~Vi~t~R~~~~l~~l~~~~~---~~~----------------~~~~~Dvt~ 59 (276)
T PRK06482 1 MTK--TWFITGASSGFGRGLTERLLARGDRVAATVRRPDALDDLKARYG---ERL----------------WVLQLDVTD 59 (276)
T ss_pred CCC--EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCC---CCE----------------EEEEEECCC
T ss_conf 997--89991586599999999999889989999789899999998669---957----------------999953799
Q ss_pred HHHHHHHHHHHHHCCCCCCEEEECC
Q ss_conf 0699999999972078998999679
Q gi|254780716|r 79 GDPVDQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 79 g~~v~~vi~~l~~~l~~g~iiID~s 103 (475)
.+.++++++........=|++|...
T Consensus 60 ~~~v~~~v~~~~~~~G~iDvLVNNA 84 (276)
T PRK06482 60 TAAVRAVVDRAFAELGRIDVVVSNA 84 (276)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEECC
T ss_conf 9999999999999809987887468
No 227
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=96.28 E-value=0.055 Score=34.20 Aligned_cols=83 Identities=16% Similarity=0.250 Sum_probs=60.6
Q ss_pred EEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 5698--15711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 6 IGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 6 IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
+.+| |-+-+|..+|+.|++.|.+|.+.|+++++.++..++-......+ ..+-.-|.+.+.++
T Consensus 11 ~alVTG~~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~----------------~~~~~Dvtd~~~v~ 74 (254)
T PRK08085 11 NILITGSAQGIGFLLATGLAEYGAEIIINDITAERAEKAVAKLRQEGIKA----------------HAAAFNVTHKQEIE 74 (254)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEE----------------EEEECCCCCHHHHH
T ss_conf 89996856789999999999869999999698899999999998449818----------------99982689999999
Q ss_pred HHHHHHHHCCCCCCEEEECCC
Q ss_conf 999999720789989996798
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDGGN 104 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~st 104 (475)
..++.+.....+=|++|...-
T Consensus 75 ~~v~~~~~~~G~iDilVnNAG 95 (254)
T PRK08085 75 AAIEHIEKDIGPIDVLINNAG 95 (254)
T ss_pred HHHHHHHHHHCCCCEEEECCC
T ss_conf 999999998399869998986
No 228
>COG2344 AT-rich DNA-binding protein [General function prediction only]
Probab=96.25 E-value=0.016 Score=38.16 Aligned_cols=81 Identities=20% Similarity=0.337 Sum_probs=54.2
Q ss_pred CEEEEEECCHHHHHHHHH-HH-HCCCEE-EEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHH
Q ss_conf 805698157111688999-99-789859-997399899999997122112784032898999860577889999769906
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLN-IL-DKGFRL-AVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGD 80 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~n-L~-~~G~~V-~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~ 80 (475)
.++-+||.|++|.+++.. +. ++|+++ .+||.+++++-..+.. -.+....++++++... ..++.+++||+.
T Consensus 85 tnviiVG~GnlG~All~Y~f~~~~~~~iv~~FDv~~~~VG~~~~~-----v~V~~~d~le~~v~~~-dv~iaiLtVPa~- 157 (211)
T COG2344 85 TNVIIVGVGNLGRALLNYNFSKKNGMKIVAAFDVDPDKVGTKIGD-----VPVYDLDDLEKFVKKN-DVEIAILTVPAE- 157 (211)
T ss_pred EEEEEECCCHHHHHHHCCCCHHHCCCEEEEEECCCHHHHCCCCCC-----EEEECHHHHHHHHHHC-CCCEEEEECCHH-
T ss_conf 348999057088898607423326935999961787883752488-----1455268888898861-761899973489-
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999972
Q gi|254780716|r 81 PVDQLIDKLKP 91 (475)
Q Consensus 81 ~v~~vi~~l~~ 91 (475)
...++.+.|..
T Consensus 158 ~AQ~vad~Lv~ 168 (211)
T COG2344 158 HAQEVADRLVK 168 (211)
T ss_pred HHHHHHHHHHH
T ss_conf 89999999998
No 229
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.25 E-value=0.066 Score=33.60 Aligned_cols=83 Identities=12% Similarity=0.168 Sum_probs=59.2
Q ss_pred EEEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 05698--1571116889999978985999739989999999712211278403289899986057788999976990699
Q gi|254780716|r 5 DIGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 5 ~IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
++.+| |-+-+|..+|+.|++.|++|.+.+|+.++.++..++.......+. .+-.-|.+.+.+
T Consensus 8 KvalVTGgs~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~----------------~~~~Dv~~~~~~ 71 (250)
T PRK12939 8 KRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAH----------------AIAADLADPASV 71 (250)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEE----------------EEEECCCCHHHH
T ss_conf 8799958366899999999998799999996988999999999995599099----------------999248999999
Q ss_pred HHHHHHHHHCCCCCCEEEECC
Q ss_conf 999999972078998999679
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~s 103 (475)
+.+++........=|++|...
T Consensus 72 ~~~~~~~~~~~g~iDiLVNNA 92 (250)
T PRK12939 72 QRFFDAAAAALGGLDGLVNNA 92 (250)
T ss_pred HHHHHHHHHHCCCCCEEEECC
T ss_conf 999999999749997999887
No 230
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.24 E-value=0.045 Score=34.84 Aligned_cols=76 Identities=18% Similarity=0.324 Sum_probs=56.8
Q ss_pred CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf 71116889999978985999739989999999712211278403289899986057788999976990699999999972
Q gi|254780716|r 12 GSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQLIDKLKP 91 (475)
Q Consensus 12 G~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi~~l~~ 91 (475)
.-+|..+|+.|++.|.+|.+.+|+.++.+++.++....+..+. .+-.-|.+.+.++++++.+..
T Consensus 50 sGIG~aiA~~la~~Ga~Vvl~~R~~~~l~~~~~~i~~~g~~~~----------------~~~~Dvtd~~~v~~~v~~~~~ 113 (290)
T PRK05866 50 SGIGEAAAEKFARRGATVVAVARRKDLLDAVADRITAAGGDAM----------------AIPCDLSDLDAVDALVADVEE 113 (290)
T ss_pred CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEE----------------EEECCCCCHHHHHHHHHHHHH
T ss_conf 0999999999998699899998999999999999996499089----------------997788989999999999999
Q ss_pred CCCCCCEEEECC
Q ss_conf 078998999679
Q gi|254780716|r 92 LLSPEDILLDGG 103 (475)
Q Consensus 92 ~l~~g~iiID~s 103 (475)
....=||+|...
T Consensus 114 ~~G~iDiLVNNA 125 (290)
T PRK05866 114 RIGGVDILINNA 125 (290)
T ss_pred HHCCCCEEEECC
T ss_conf 859988899757
No 231
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=96.23 E-value=0.073 Score=33.26 Aligned_cols=83 Identities=13% Similarity=0.185 Sum_probs=59.5
Q ss_pred EEEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 05698--1571116889999978985999739989999999712211278403289899986057788999976990699
Q gi|254780716|r 5 DIGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 5 ~IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
++.+| |-+-+|..+|+.|+++|++|.+.+|+.++.++..++......++ ..+-.-+.+.+.+
T Consensus 7 K~alITGgs~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~g~~~----------------~~~~~Dl~~~~~~ 70 (253)
T PRK12826 7 RVALVTGAARGIGRAIAVRFAADGADVIVVDICGQAAAATAELVAAAGGKA----------------RAYQVDVRDRAAL 70 (253)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCE----------------EEEEEECCCHHHH
T ss_conf 889994897789999999999879989999898899999999998509958----------------9999517999999
Q ss_pred HHHHHHHHHCCCCCCEEEECC
Q ss_conf 999999972078998999679
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~s 103 (475)
+++++.+.....+=|++|...
T Consensus 71 ~~~~~~~~~~~g~iD~lvnnA 91 (253)
T PRK12826 71 KALVAAGVERFGRLDILVANA 91 (253)
T ss_pred HHHHHHHHHHHCCCCEEEECC
T ss_conf 999999999839987899899
No 232
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=96.23 E-value=0.13 Score=31.52 Aligned_cols=52 Identities=15% Similarity=0.210 Sum_probs=27.8
Q ss_pred CCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHH-HHHHHHHH
Q ss_conf 35684378845489998889999987501567861898569874678-98877678
Q gi|254780716|r 136 ARSGASLMVGGNEKAYNRVENILLSISAKYQNSPCCALLGPDGSGHF-VKMIHNGI 190 (475)
Q Consensus 136 A~~G~slMvGG~~~~~~~~~piL~~iaak~~~~~cv~y~G~~GsGh~-vKMVhNgI 190 (475)
-..|..+++=|+++..++....|. .+...-.-|.-+|.+--|.+ +|+..+++
T Consensus 203 l~~gD~l~vig~~~~i~~~~~~~g---~~~~~~~~v~I~Ggg~ig~~la~~L~~~~ 255 (455)
T PRK09496 203 IEAGDEVFFVAASEHIRRVMSELG---RLEKPVKRIMIAGGGNIGLYLAKLLEKGY 255 (455)
T ss_pred EECCCEEEEEECHHHHHHHHHHHC---CCCCCCCEEEEECCCHHHHHHHHHHHCCC
T ss_conf 733889999925776999999858---65466651899878699999999874088
No 233
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase; InterPro: IPR011284 This entry represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis found in many plant and bacterial species. This enzyme is involved in type II fatty acid biosynthesis, where the individual metabolic transformations are carried out by different enzymes rather than by a single enzyme as occurs in type I fatty acid biosynthesis . Structural studies show that the enzyme is a tetramer which forms a typical Rossman fold , . Unlike other members of the short-chain dehydrogenase/reductase superfamily, the enzyme undergoes a marked conformational change upon binding of the NADP(H)cofactor. This conformational change aligns the side chains of the catalytic triad at the active site in an active conformation and increases the affinity of the enzyme for its substrate.; GO: 0004316 3-oxoacyl-[acyl-carrier-protein] reductase activity, 0051287 NAD binding, 0006633 fatty acid biosynthetic process.
Probab=96.22 E-value=0.037 Score=35.47 Aligned_cols=173 Identities=18% Similarity=0.322 Sum_probs=100.5
Q ss_pred HHHHHHHHHHHCCCEEEEEECCHH-HHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHC
Q ss_conf 116889999978985999739989-9999997122112784032898999860577889999769906999999999720
Q gi|254780716|r 14 MGSNLSLNILDKGFRLAVYNKDFE-LTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQLIDKLKPL 92 (475)
Q Consensus 14 MG~~mA~nL~~~G~~V~vydr~~~-~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi~~l~~~ 92 (475)
.|+++|+.|++.|.+|.+.+++.+ +++++.++....+-... .+-+=|.+.+.++++++++...
T Consensus 10 IG~AIA~~LA~~Ga~V~i~y~~~e~~~~~~~~e~~~~G~~a~----------------~~~~dvs~~~~~~~~~~~~~~~ 73 (238)
T TIGR01830 10 IGRAIALKLAKEGAKVIITYRTSEEGAEEVVEEIKELGVKAA----------------GVVLDVSDREDVKALVEEAEEE 73 (238)
T ss_pred HHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCEEE----------------EEEECCCCHHHHHHHHHHHHHH
T ss_conf 679999999867995999659825788899999985697599----------------9960388889999999999998
Q ss_pred CCCCCEEEEC------------CCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHH
Q ss_conf 7899899967------------9865789999999998479943067546760003568437884548999888999998
Q gi|254780716|r 93 LSPEDILLDG------------GNSHFCDTQIRSLQLSEKGIYFIGIGVSGGVKGARSGASLMVGGNEKAYNRVENILLS 160 (475)
Q Consensus 93 l~~g~iiID~------------sts~~~~t~~~~~~l~~kgi~fid~pVSGG~~gA~~G~slMvGG~~~~~~~~~piL~~ 160 (475)
+. =||+|.= +-..|++.++..- +.+|.-++.+++.
T Consensus 74 ~G-iDiLVNNAGITrD~Ll~RMk~edWd~Vi~~NL--------------------------------~g~F~~t~~v~~~ 120 (238)
T TIGR01830 74 LG-IDILVNNAGITRDNLLMRMKEEDWDAVINVNL--------------------------------KGVFNLTQAVLRP 120 (238)
T ss_pred HC-CEEEEECCCCCCCCHHCCCCHHHHHHHHHHHH--------------------------------HHHHHHHHHHHHH
T ss_conf 29-90899787413430100488556899998612--------------------------------6687888998898
Q ss_pred HHCCCCCC-----CEEEEECCCCHHHHHH----HH----------------HH-----HHHHHHHHHHHHHH--H-----
Q ss_conf 75015678-----6189856987467898----87----------------76-----78788899989999--9-----
Q gi|254780716|r 161 ISAKYQNS-----PCCALLGPDGSGHFVK----MI----------------HN-----GIEYANMQLIADIY--G----- 203 (475)
Q Consensus 161 iaak~~~~-----~cv~y~G~~GsGh~vK----MV----------------hN-----gIey~~mq~iaE~~--~----- 203 (475)
|-.+=.|. .=|..+|.+|...|.= || -| -|+=-|-..+.|-- .
T Consensus 121 M~K~R~GrIINisSVVG~~GN~GQaNYaASKAG~IGftKSlAkElasRnItVNaVAPGFI~TdMT~~L~e~~~~~~l~~I 200 (238)
T TIGR01830 121 MIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIETDMTDKLSEKVKKAMLSQI 200 (238)
T ss_pred HHHHCCCCEEEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHCCHHHHHHHHHCC
T ss_conf 87506743486100200006874267888875589999999986036870588874899897000216988999998527
Q ss_pred HHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
Q ss_conf 99964289978999999860688443079999999997
Q gi|254780716|r 204 ILRDSLNKNPLEISHLFSKWDTGKLSSYLIKITAEILS 241 (475)
Q Consensus 204 ~l~~~~~~~~~~i~~vf~~w~~~~~~syLl~i~~~il~ 241 (475)
.|++. + .|+|||.+-... -++..|| ||-++|.
T Consensus 201 PLgR~-G-~pEeVA~~v~FL-ASd~AsY---ITGqv~~ 232 (238)
T TIGR01830 201 PLGRF-G-TPEEVANAVAFL-ASDEASY---ITGQVIH 232 (238)
T ss_pred CCCCC-C-CHHHHHHHHHHH-CCCCCCC---CCCCEEE
T ss_conf 72326-7-765699999973-2512474---2551663
No 234
>PRK07832 short chain dehydrogenase; Provisional
Probab=96.21 E-value=0.062 Score=33.79 Aligned_cols=77 Identities=14% Similarity=0.226 Sum_probs=55.2
Q ss_pred CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf 71116889999978985999739989999999712211278403289899986057788999976990699999999972
Q gi|254780716|r 12 GSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQLIDKLKP 91 (475)
Q Consensus 12 G~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi~~l~~ 91 (475)
+-+|..+|+.|++.|++|.+.||+.++.+++.++......... ..+-+-|.+.+.++++.+.+..
T Consensus 10 sGIG~a~A~~la~~Ga~v~l~~r~~~~l~~~~~~l~~~g~~~~---------------~~~~~Dvsd~~~v~~~~~~~~~ 74 (272)
T PRK07832 10 SGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVP---------------EHRALDISDYDAVAAFAADIHA 74 (272)
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEE---------------EEEECCCCCHHHHHHHHHHHHH
T ss_conf 1999999999998899899998988999999999984589714---------------7885668999999999999999
Q ss_pred CCCCCCEEEECC
Q ss_conf 078998999679
Q gi|254780716|r 92 LLSPEDILLDGG 103 (475)
Q Consensus 92 ~l~~g~iiID~s 103 (475)
...+=|++|...
T Consensus 75 ~~g~iDiLiNNA 86 (272)
T PRK07832 75 AHPSMDVVMNIA 86 (272)
T ss_pred HCCCCCEEEECC
T ss_conf 729988899878
No 235
>KOG2012 consensus
Probab=96.21 E-value=0.028 Score=36.33 Aligned_cols=120 Identities=16% Similarity=0.208 Sum_probs=77.0
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHCCCCC---CCCEECCCHHHHHHHCCCCCEEEEEC
Q ss_conf 998805698157111688999997898-59997399899999997122112---78403289899986057788999976
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGF-RLAVYNKDFELTDVFIKKISGLS---QKVIVTKNLEQMVEAVCKPRKILMMV 76 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~-~V~vydr~~~~~~~l~~~~~~~~---~~~~~~~s~~e~v~~l~~pr~Iil~v 76 (475)
|..++|=+.|||-.|.-+|+|+.-.|. .|..||..+-...++..+.--.. ..-++..+.+-+++ |+. -|-..+
T Consensus 35 m~~S~VLisGl~GLGvEIAKNliLaGVksvTlhD~~~~~~~DLssqf~L~E~DigknRA~as~~~Lae-LN~--yV~V~v 111 (1013)
T KOG2012 35 MQGSNVLISGLQGLGVEIAKNLILAGVKSVTLHDPRPVQLSDLSSQFYLSEEDIGKNRAEASVEKLAE-LNN--YVPVVV 111 (1013)
T ss_pred HHHCCEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCEEEEHHHCCCCHHHHHHHHHHH-HHC--CEEEEE
T ss_conf 75186887627753289986671204504785078765387622450633886087668889999998-626--522697
Q ss_pred CCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCC
Q ss_conf 9906999999999720789989996798657899999999984799430675467
Q gi|254780716|r 77 TDGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSG 131 (475)
Q Consensus 77 p~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSG 131 (475)
-++..++ ..|+.=++||-+ +....+..++...|.+.||.||.|-+-|
T Consensus 112 ~t~~~~~-------e~L~~FqvVVlt-~~~le~q~~i~~fch~~~i~fi~ad~RG 158 (1013)
T KOG2012 112 LTGPLTE-------EFLSDFQVVVLT-DASLEEQLKINDFCHSHGIAFIAADTRG 158 (1013)
T ss_pred ECCCCCH-------HHHHCCCEEEEE-CCCHHHHHHHHHHHHHCCEEEEEECCCH
T ss_conf 1476618-------787377189996-5746888879888876481899831310
No 236
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.21 E-value=0.064 Score=33.71 Aligned_cols=78 Identities=17% Similarity=0.253 Sum_probs=56.6
Q ss_pred ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHH
Q ss_conf 15711168899999789859997399899999997122112784032898999860577889999769906999999999
Q gi|254780716|r 10 GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQLIDKL 89 (475)
Q Consensus 10 GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi~~l 89 (475)
|-+-+|..+|+.|+++|.+|.+.||+.++.++..++.......+ ..+..-|.+.+.+++.++.+
T Consensus 13 as~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~----------------~~~~~Dv~~~~~v~~~~~~~ 76 (253)
T PRK08217 13 GAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAQCAALGGEA----------------EVYAANVTDEEDVEATFAQI 76 (253)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCE----------------EEEECCCCCHHHHHHHHHHH
T ss_conf 87789999999999879989999799999999999999659948----------------99982479999999999999
Q ss_pred HHCCCCCCEEEECC
Q ss_conf 72078998999679
Q gi|254780716|r 90 KPLLSPEDILLDGG 103 (475)
Q Consensus 90 ~~~l~~g~iiID~s 103 (475)
.....+=|++|...
T Consensus 77 ~~~~g~iD~lVnNA 90 (253)
T PRK08217 77 AEDFGQLNGLINNA 90 (253)
T ss_pred HHHHCCCCEEEECC
T ss_conf 99839985999857
No 237
>pfam00056 Ldh_1_N lactate/malate dehydrogenase, NAD binding domain. L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate. The enzyme participates in the citric acid cycle. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. N-terminus (this family) is a Rossmann NAD-binding fold. C-terminus is an unusual alpha+beta fold.
Probab=96.20 E-value=0.038 Score=35.37 Aligned_cols=104 Identities=14% Similarity=0.259 Sum_probs=61.7
Q ss_pred EEEEEECC-HHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHC---CCC-C-CCCEECCCHHHHHHHCCCCCEEEEEC
Q ss_conf 05698157-111688999997898--5999739989999999712---211-2-78403289899986057788999976
Q gi|254780716|r 5 DIGIIGLG-SMGSNLSLNILDKGF--RLAVYNKDFELTDVFIKKI---SGL-S-QKVIVTKNLEQMVEAVCKPRKILMMV 76 (475)
Q Consensus 5 ~IGiIGLG-~MG~~mA~nL~~~G~--~V~vydr~~~~~~~l~~~~---~~~-~-~~~~~~~s~~e~v~~l~~pr~Iil~v 76 (475)
+|++||.| +.|+.+|..|+.+|+ ++..+|+++++++...... ... . .......+.++ ++..++|+++-
T Consensus 2 KV~IIGagg~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~~~~~----~~daDiVVita 77 (142)
T pfam00056 2 KVAVVGAGGGVGSSLAFALALQGLADELVLVDINKDKAEGVAMDLSHGSTFLSVPGIVGGDDYEA----LKDADVVVITA 77 (142)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCEEECCCCHHH----HCCCCEEEEEC
T ss_conf 89998987789999999997479663478850577641179999861443478876974883888----37899999815
Q ss_pred CC---------------HHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHH
Q ss_conf 99---------------0699999999972078998999679865789999999
Q gi|254780716|r 77 TD---------------GDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSL 115 (475)
Q Consensus 77 p~---------------g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~ 115 (475)
-. .+.+.++...+..+- +..++|-- ++|-|+.....
T Consensus 78 G~~~k~g~~R~dll~~Na~I~~~i~~~i~~~~-p~~ivivv--tNPvDvmt~~~ 128 (142)
T pfam00056 78 GVPRKPGMTRLDLLNRNAGIFKDIVPAIAKSA-PDAIVLVV--SNPVDILTYIA 128 (142)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEEEE--CCCHHHHHHHH
T ss_conf 77789998778999974699999999999769-98199994--59468899999
No 238
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=96.20 E-value=0.11 Score=31.99 Aligned_cols=44 Identities=14% Similarity=0.258 Sum_probs=34.7
Q ss_pred CEEEEEECCHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHHCCC
Q ss_conf 805698157111688999997-898599973998999999971221
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILD-KGFRLAVYNKDFELTDVFIKKISG 48 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~-~G~~V~vydr~~~~~~~l~~~~~~ 48 (475)
..|+++|+|-.| .||.-+++ .|.+|+++|++.+|.+...+.++.
T Consensus 168 ~~V~I~G~GGlG-h~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd 212 (339)
T COG1064 168 KWVAVVGAGGLG-HMAVQYAKAMGAEVIAITRSEEKLELAKKLGAD 212 (339)
T ss_pred CEEEEECCCHHH-HHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCC
T ss_conf 899998774899-999999998699699995787799999984882
No 239
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=96.20 E-value=0.091 Score=32.59 Aligned_cols=100 Identities=18% Similarity=0.317 Sum_probs=59.9
Q ss_pred EEEEEECCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHCC---C-CCCCC-EECCCHHHHHHHCCCCCEEEEEC-
Q ss_conf 05698157111688999997898--59997399899999997122---1-12784-03289899986057788999976-
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGF--RLAVYNKDFELTDVFIKKIS---G-LSQKV-IVTKNLEQMVEAVCKPRKILMMV- 76 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~--~V~vydr~~~~~~~l~~~~~---~-~~~~~-~~~~s~~e~v~~l~~pr~Iil~v- 76 (475)
+|++||.|+.|..+|..|+.++. ++..+|+++++++..+.... . ..... ....+.++ ++..++|++.-
T Consensus 2 KI~IIGaG~VG~~~a~~l~~~~l~~el~L~Di~~~~a~G~a~DL~~~~~~~~~~~~i~~~~~~~----~~~aDvvVitAG 77 (306)
T cd05291 2 KVVIIGAGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYSD----CKDADIVVITAG 77 (306)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHH----HCCCCEEEECCC
T ss_conf 5999996988999999998579987799981898701769998870133059973996088788----478999999067
Q ss_pred -C-------------CHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHH
Q ss_conf -9-------------9069999999997207899899967986578999
Q gi|254780716|r 77 -T-------------DGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQ 111 (475)
Q Consensus 77 -p-------------~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~ 111 (475)
| +.+.+.++...+..+ .+..++|-.+| |-|+.
T Consensus 78 ~~rk~g~~R~dLl~~N~~I~k~i~~~i~~~-~p~aivivvtN--PvDvm 123 (306)
T cd05291 78 APQKPGETRLDLLEKNAKIMKSIVPKIKAS-GFDGIFLVASN--PVDVI 123 (306)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHC-CCCCEEEEECC--CHHHH
T ss_conf 667999987899997899999999998722-99718999358--16789
No 240
>COG0074 SucD Succinyl-CoA synthetase, alpha subunit [Energy production and conversion]
Probab=96.19 E-value=0.098 Score=32.32 Aligned_cols=220 Identities=13% Similarity=0.139 Sum_probs=128.2
Q ss_pred CEEEEEEC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 80569815-71116889999978985999739989999999712211278403289899986057788999976990699
Q gi|254780716|r 4 ADIGIIGL-GSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 4 ~~IGiIGL-G~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
+.+-+-|. |.||...+..+++-|..+.+ ..+|-+ +.........+++++|.++.. ..+.-++.||...+.
T Consensus 9 tkvivqGitg~~gtfh~~~~l~yGt~~V~-GvtPgk-------gG~~~~g~PVf~tV~EA~~~~-~a~~svI~Vp~~~aa 79 (293)
T COG0074 9 TKVIVQGITGKQGTFHTEQMLAYGTKIVG-GVTPGK-------GGQTILGLPVFNTVEEAVKET-GANASVIFVPPPFAA 79 (293)
T ss_pred CEEEEECCCCCCCHHHHHHHHHHCCCEEE-CCCCCC-------CCEEECCCCHHHHHHHHHHHH-CCCEEEEECCCHHHH
T ss_conf 74898336542003889999972985664-236897-------743883754789999998702-897799964817789
Q ss_pred HHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHH
Q ss_conf 99999997207899899967986578999999999847994306754676000356843788454899988899999875
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGVKGARSGASLMVGGNEKAYNRVENILLSIS 162 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~~gA~~G~slMvGG~~~~~~~~~piL~~ia 162 (475)
|++++-+-..+ .-+++-.-+....|+.+..++++++|...++.---|.-..-.....+|+|
T Consensus 80 dai~EAida~i--~liv~ITEgIP~~D~~~~~~~a~~~g~~iiGPncpGiI~Pg~~kiGimp~----------------- 140 (293)
T COG0074 80 DAILEAIDAGI--KLVVIITEGIPVLDMLELKRYAREKGTRLIGPNCPGIITPGECKIGIMPG----------------- 140 (293)
T ss_pred HHHHHHHHCCC--CEEEEEECCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCEEEECHH-----------------
T ss_conf 99999985799--57999959998889999999998669799879999637478533510523-----------------
Q ss_pred CCCCCCCEEEEECCCCHHHHH--HHHHHHHHHHHHHH--HHHHHHHHHHHCCCCHHHHHHHHHHCCC-------CCCCHH
Q ss_conf 015678618985698746789--88776787888999--8999999996428997899999986068-------844307
Q gi|254780716|r 163 AKYQNSPCCALLGPDGSGHFV--KMIHNGIEYANMQL--IADIYGILRDSLNKNPLEISHLFSKWDT-------GKLSSY 231 (475)
Q Consensus 163 ak~~~~~cv~y~G~~GsGh~v--KMVhNgIey~~mq~--iaE~~~~l~~~~~~~~~~i~~vf~~w~~-------~~~~sy 231 (475)
+....-+|..++.+|..-|= ..+++ .++=|. |+=+=+ ...+.+..+..+.|++=-+ |+...-
T Consensus 141 -~i~~~G~IGiVSrSGTLTyE~~~qlt~---~G~GqS~~IGiGGD---pi~Gt~fid~L~~fe~Dp~T~~ivmiGEiGG~ 213 (293)
T COG0074 141 -NIYKPGNIGIVSRSGTLTYEAVSQLTE---AGLGQSTAIGIGGD---PIPGTSFIDALEMFEADPETEAIVMIGEIGGP 213 (293)
T ss_pred -HHCCCCCEEEEECCCCHHHHHHHHHHH---CCCCEEEEEEECCC---CCCCCCHHHHHHHHHCCCCCEEEEEEECCCCC
T ss_conf -405788569996686639999999976---38855899985788---76881599999986458674079999267993
Q ss_pred HHHHHHHHHHHCCCCCCCCCHHHCCCCCC
Q ss_conf 99999999974056799952001023336
Q gi|254780716|r 232 LIKITAEILSSSDTITGMPIIDVICDKAS 260 (475)
Q Consensus 232 Ll~i~~~il~~k~~~~g~~lid~i~d~~~ 260 (475)
-=|-.++.++.+ ..+.|++-.|...-.
T Consensus 214 aEe~AA~~i~~~--~~~KPVVa~iaG~ta 240 (293)
T COG0074 214 AEEEAAEYIKAN--ATRKPVVAYIAGRTA 240 (293)
T ss_pred HHHHHHHHHHHH--CCCCCEEEEEECCCC
T ss_conf 899999999963--468986999843679
No 241
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=96.16 E-value=0.04 Score=35.22 Aligned_cols=125 Identities=18% Similarity=0.223 Sum_probs=73.1
Q ss_pred CCEEEEEECCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHCCCCCC--CCEECCCHHHHHHHCCCCCEEEEECCCH
Q ss_conf 8805698157111688999997898-599973998999999971221127--8403289899986057788999976990
Q gi|254780716|r 3 QADIGIIGLGSMGSNLSLNILDKGF-RLAVYNKDFELTDVFIKKISGLSQ--KVIVTKNLEQMVEAVCKPRKILMMVTDG 79 (475)
Q Consensus 3 k~~IGiIGLG~MG~~mA~nL~~~G~-~V~vydr~~~~~~~l~~~~~~~~~--~~~~~~s~~e~v~~l~~pr~Iil~vp~g 79 (475)
+++|-+||+|-.|.+.|..|+..|. ++.+.|.+.=...++..+---..+ +-.-+...++....++ |.+-+..++.
T Consensus 138 ~a~VlivG~GGLGs~~a~yLA~aGVG~i~lvD~D~Ve~SNL~RQil~~~~diG~~Ka~~a~~~L~~~N-p~i~i~~~~~- 215 (379)
T PRK08762 138 RARVLLIGAGGLGSPAAFYLAAAGVGHLRIADHDVVDRSNLQRQILHTEDSVGQPKVDSAAQRIAALN-PRVQVEAVQT- 215 (379)
T ss_pred HCCEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHCCCCCHHHCCCHHHHHHHHHHHHHC-CCCCEEEEHH-
T ss_conf 39789988875579999999983797589762886133450112574643355558999999999868-9973385021-
Q ss_pred HHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCC
Q ss_conf 699999999972078998999679865789999999998479943067546760
Q gi|254780716|r 80 DPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGV 133 (475)
Q Consensus 80 ~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~ 133 (475)
....+.+.++ ++.-|+||||+-. +..-.-....|.+.++-++.+.+.|.+
T Consensus 216 ~l~~~n~~~l---i~~~DlViDctDN-~~tR~liN~~c~~~~~PlV~ga~~g~~ 265 (379)
T PRK08762 216 RVTSSNVEAL---LQDVDVVVDGADN-FPARYLLNDACVKLGKPLVYGAVQRFE 265 (379)
T ss_pred CCCHHHHHHH---HHHCCEEEECCCC-HHHHHHHHHHHHHHCCCEEEEEEECCE
T ss_conf 0898999999---8628899986887-788999999999979997999884469
No 242
>PRK05650 short chain dehydrogenase; Provisional
Probab=96.15 E-value=0.061 Score=33.85 Aligned_cols=75 Identities=16% Similarity=0.181 Sum_probs=56.0
Q ss_pred CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf 71116889999978985999739989999999712211278403289899986057788999976990699999999972
Q gi|254780716|r 12 GSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQLIDKLKP 91 (475)
Q Consensus 12 G~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi~~l~~ 91 (475)
.-+|..+|+.|+++|++|.+.||+.++.+++.++.......+ ..+-+-|.+.+.++++++.+..
T Consensus 10 sGIG~alA~~la~~G~~V~l~~r~~~~l~~~~~~l~~~g~~~----------------~~~~~Dvt~~~~~~~~~~~v~~ 73 (270)
T PRK05650 10 SGLGRAIALRWAREGWRLALADVNEEGGEETLKELREAGGDG----------------FYQRCDVRDYSQLTALAQACEE 73 (270)
T ss_pred CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCE----------------EEEECCCCCHHHHHHHHHHHHH
T ss_conf 499999999999889989999798899999999998449928----------------9998458999999999999999
Q ss_pred CCCCCCEEEEC
Q ss_conf 07899899967
Q gi|254780716|r 92 LLSPEDILLDG 102 (475)
Q Consensus 92 ~l~~g~iiID~ 102 (475)
...+=|++|..
T Consensus 74 ~~g~iDiLVNN 84 (270)
T PRK05650 74 KWGGIDVIVNN 84 (270)
T ss_pred HHCCCCEEEEC
T ss_conf 83997789624
No 243
>PRK08251 short chain dehydrogenase; Provisional
Probab=96.14 E-value=0.069 Score=33.48 Aligned_cols=86 Identities=17% Similarity=0.208 Sum_probs=59.1
Q ss_pred CCEEEEEECC-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHH
Q ss_conf 8805698157-111688999997898599973998999999971221127840328989998605778899997699069
Q gi|254780716|r 3 QADIGIIGLG-SMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDP 81 (475)
Q Consensus 3 k~~IGiIGLG-~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~ 81 (475)
+.+|=+.|-+ -+|..+|+.|+++|++|.+..|+.++.+++.++......+... ..+-+-|.+.+.
T Consensus 2 ~K~vlITGAssGIG~alA~~la~~G~~v~l~~r~~~~l~~~~~el~~~~~~~~v--------------~~~~~Dvsd~~~ 67 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKV--------------AVAALDVNDHDQ 67 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCEE--------------EEEECCCCCHHH
T ss_conf 998999478639999999999987998999989888999999999873799739--------------999786786899
Q ss_pred HHHHHHHHHHCCCCCCEEEEC
Q ss_conf 999999997207899899967
Q gi|254780716|r 82 VDQLIDKLKPLLSPEDILLDG 102 (475)
Q Consensus 82 v~~vi~~l~~~l~~g~iiID~ 102 (475)
++++++.+...+..=|++|..
T Consensus 68 v~~~~~~~~~~~g~iD~lvnN 88 (248)
T PRK08251 68 VFEVFAEFSDELGGLDRVIVN 88 (248)
T ss_pred HHHHHHHHHHHHCCCCEEEEC
T ss_conf 999999999980999899985
No 244
>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids
Probab=96.10 E-value=0.14 Score=31.31 Aligned_cols=121 Identities=18% Similarity=0.261 Sum_probs=70.0
Q ss_pred CCEEEEEECCHHHHHHHHHHHHCCCEEE-EEE-------C---CHHHHHHHHHHCCCCCCCCEEC--CCHHHHHHHCCCC
Q ss_conf 8805698157111688999997898599-973-------9---9899999997122112784032--8989998605778
Q gi|254780716|r 3 QADIGIIGLGSMGSNLSLNILDKGFRLA-VYN-------K---DFELTDVFIKKISGLSQKVIVT--KNLEQMVEAVCKP 69 (475)
Q Consensus 3 k~~IGiIGLG~MG~~mA~nL~~~G~~V~-vyd-------r---~~~~~~~l~~~~~~~~~~~~~~--~s~~e~v~~l~~p 69 (475)
...|.+-|+|+.|+..|+.|.+.|..|. +-| . +.+...+..++..... ..... -+.+++.. ..+
T Consensus 31 g~~v~IqG~GnVG~~~a~~L~~~Gakvv~vsD~~G~i~~~~Gld~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~ 107 (227)
T cd01076 31 GARVAIQGFGNVGSHAARFLHEAGAKVVAVSDSDGTIYNPDGLDVPALLAYKKEHGSVL-GFPGAERITNEELLE--LDC 107 (227)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCHHHHHHHHHHCCCCC-CCCCCCCCCCCCHHC--CCC
T ss_conf 99999989889999999999987995999984787388888899999999999659802-678875389623104--788
Q ss_pred CEEEEECCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCC--CCCC
Q ss_conf 899997699069999999997207899899967986578999999999847994306754--6760
Q gi|254780716|r 70 RKILMMVTDGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGV--SGGV 133 (475)
Q Consensus 70 r~Iil~vp~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pV--SGG~ 133 (475)
++.+-|-..+....+.... + .-.+|+.+.|... |.+..+.|.++||.++=--+ +||+
T Consensus 108 DI~iP~A~~~~I~~~~a~~----l-~ak~I~EgAN~p~--t~~A~~~L~~rgI~viPD~laNaGGV 166 (227)
T cd01076 108 DILIPAALENQITADNADR----I-KAKIIVEAANGPT--TPEADEILHERGVLVVPDILANAGGV 166 (227)
T ss_pred CEEEECCCCCCCCHHHHHH----C-CCEEEEECCCCCC--CHHHHHHHHHCCCEEECCHHHCCCCE
T ss_conf 7898777669779999854----4-7619984578998--98899999988698968077448774
No 245
>COG0579 Predicted dehydrogenase [General function prediction only]
Probab=96.09 E-value=0.021 Score=37.22 Aligned_cols=114 Identities=15% Similarity=0.174 Sum_probs=73.7
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCC
Q ss_conf 99880569815711168899999789--8599973998999999971221127840328989998605778899997699
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKG--FRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTD 78 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G--~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~ 78 (475)
|++.++-+||-|.||..+|.-|.+-+ ++|.+..+...-...--...+...-.. ...++.++- +=+|+.-
T Consensus 1 ~~~~DvvIIGgGI~G~a~a~~Ls~~~p~~~V~llEk~~~~a~~sS~~NSgviHag-~~y~p~slk--------a~l~~~g 71 (429)
T COG0579 1 MMDYDVVIIGGGIMGAATAYELSEYEPDLSVALLEKEDGVAQESSSNNSGVIHAG-LYYTPGSLK--------AKLCVAG 71 (429)
T ss_pred CCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCEECC-CCCCCCCHH--------HHHHHHH
T ss_conf 9832299989738989999999973889659999705765333456765344255-448985513--------3999999
Q ss_pred HHHHHHHHHHH-HHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 06999999999-7207899899967986578999999999847994
Q gi|254780716|r 79 GDPVDQLIDKL-KPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIY 123 (475)
Q Consensus 79 g~~v~~vi~~l-~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~ 123 (475)
.....++..++ .|+...|.+++-.+-.....-..+++++.+.|+.
T Consensus 72 ~~~~~~~~kq~~~~f~~~g~l~vA~~e~e~~~L~~l~~~~~~ngv~ 117 (429)
T COG0579 72 NINEFAICKQLGIPFINCGKLSVATGEEEVERLEKLYERGKANGVF 117 (429)
T ss_pred HHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCC
T ss_conf 9999999998498612368089997827789999999988657986
No 246
>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.08 E-value=0.15 Score=31.02 Aligned_cols=116 Identities=16% Similarity=0.187 Sum_probs=65.6
Q ss_pred EEEECCHHHHHHHHHHHHCCCEEEEEECCHH-----HHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEE--CCCH
Q ss_conf 6981571116889999978985999739989-----99999971221127840328989998605778899997--6990
Q gi|254780716|r 7 GIIGLGSMGSNLSLNILDKGFRLAVYNKDFE-----LTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMM--VTDG 79 (475)
Q Consensus 7 GiIGLG~MG~~mA~nL~~~G~~V~vydr~~~-----~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~--vp~g 79 (475)
-++|||.-|.+.|+-|.++|++|.+||.... ..+.+.+++-....+ ...++.++...++.++.|+.+ +|..
T Consensus 4 ~V~GlG~sG~s~a~~L~~~G~~v~~~D~~~~~~~~~~~~~L~~~gi~~~~g--~~~~~~~~~~~~~~~d~vV~SPGI~~~ 81 (459)
T PRK02705 4 HVIGLGRSGIAAARLLKAQGWEVVVSERNDSPELLERQQELEQEGITVELG--KPLELESFQPWLDQPDLVVVSPGIPWD 81 (459)
T ss_pred EEEEECHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEC--CCCCCCCHHHHCCCCCEEEECCCCCCC
T ss_conf 999548999999999997899599998989923478999998759869816--766643013311678889989964998
Q ss_pred H-HHHHHHH---------HHH-HCCCCCCEE-EECCCCCHHHHHHHHHHHHHCCCCE
Q ss_conf 6-9999999---------997-207899899-9679865789999999998479943
Q gi|254780716|r 80 D-PVDQLID---------KLK-PLLSPEDIL-LDGGNSHFCDTQIRSLQLSEKGIYF 124 (475)
Q Consensus 80 ~-~v~~vi~---------~l~-~~l~~g~ii-ID~sts~~~~t~~~~~~l~~kgi~f 124 (475)
. .+....+ ++. ..++...+| |-+||---..|.-.+..++..|..-
T Consensus 82 ~p~~~~a~~~gi~i~~eiel~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~~g~~~ 138 (459)
T PRK02705 82 HPTLVELREKGIEVIGEMELAWRALKHIPWVGITGTNGKTTVTHLLAHILQAAGLNA 138 (459)
T ss_pred CHHHHHHHHCCCCEECHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCC
T ss_conf 999999998799721499999998504975777178972789999999999839985
No 247
>PRK05717 oxidoreductase; Validated
Probab=96.08 E-value=0.093 Score=32.51 Aligned_cols=78 Identities=15% Similarity=0.231 Sum_probs=58.8
Q ss_pred EEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 5698--15711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 6 IGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 6 IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
+.+| |-+-+|..+|++|++.|.+|.+.||++++.+++.++.. . .+..+-.-|.+.+.++
T Consensus 12 valITG~s~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~---~----------------~~~~~~~Dvt~~~~v~ 72 (255)
T PRK05717 12 VALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGAKVAKALG---E----------------NAWFIAMDVADEAQVA 72 (255)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHC---C----------------CEEEEEEECCCHHHHH
T ss_conf 89995878889999999999879989999698899999999848---9----------------7589993079999999
Q ss_pred HHHHHHHHCCCCCCEEEEC
Q ss_conf 9999997207899899967
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDG 102 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~ 102 (475)
+.++.+.....+=|++|..
T Consensus 73 ~~i~~~~~~~G~id~lvnN 91 (255)
T PRK05717 73 AGVAEVLGQFGRLDALVCN 91 (255)
T ss_pred HHHHHHHHHHCCCCEEEEC
T ss_conf 9999999982999899987
No 248
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=96.07 E-value=0.092 Score=32.54 Aligned_cols=99 Identities=20% Similarity=0.354 Sum_probs=59.4
Q ss_pred EEEEECCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHC---CCC--CCCCEECCCHHHHHHHCCCCCEEEEECCC
Q ss_conf 5698157111688999997898--5999739989999999712---211--27840328989998605778899997699
Q gi|254780716|r 6 IGIIGLGSMGSNLSLNILDKGF--RLAVYNKDFELTDVFIKKI---SGL--SQKVIVTKNLEQMVEAVCKPRKILMMVTD 78 (475)
Q Consensus 6 IGiIGLG~MG~~mA~nL~~~G~--~V~vydr~~~~~~~l~~~~---~~~--~~~~~~~~s~~e~v~~l~~pr~Iil~vp~ 78 (475)
|++||.|..|..+|..|+.++. ++..||+++++++...... ... ........+.++ +...++|++..-.
T Consensus 1 V~IIGaG~VG~~~A~~l~~~~l~~el~L~Di~~~~a~g~a~Dl~~~~~~~~~~~~~~~~~~~~----~~daDvvVitaG~ 76 (300)
T cd00300 1 ITIIGAGNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGDYAD----AADADIVVITAGA 76 (300)
T ss_pred CEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEECCCCHHH----HCCCCEEEECCCC
T ss_conf 989896889999999998679988799981899811568888772563468853982798899----6799999987898
Q ss_pred ----H-----------HHHHHHHHHHHHCCCCCCEEEECCCCCHHHHH
Q ss_conf ----0-----------69999999997207899899967986578999
Q gi|254780716|r 79 ----G-----------DPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQ 111 (475)
Q Consensus 79 ----g-----------~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~ 111 (475)
| +.+.++...+..+ .++.+++-.|| |-|+.
T Consensus 77 ~rkpg~tR~dll~~Na~I~k~i~~~i~~~-~p~~ivivvtN--PvDv~ 121 (300)
T cd00300 77 PRKPGETRLDLINRNAPILRSVITNLKKY-GPDAIILVVSN--PVDIL 121 (300)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHC-CCCCEEEECCC--CHHHH
T ss_conf 99979988999998889999999999841-99718998579--66999
No 249
>pfam01113 DapB_N Dihydrodipicolinate reductase, N-terminus. Dihydrodipicolinate reductase (DapB) reduces the alpha,beta-unsaturated cyclic imine, dihydro-dipicolinate. This reaction is the second committed step in the biosynthesis of L-lysine and its precursor meso-diaminopimelate, which are critical for both protein and cell wall biosynthesis. The N-terminal domain of DapB binds the dinucleotide NADPH.
Probab=96.06 E-value=0.14 Score=31.29 Aligned_cols=89 Identities=21% Similarity=0.267 Sum_probs=54.6
Q ss_pred EEEEEEC-CHHHHHHHHHHHH-CCCEE-EEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHH
Q ss_conf 0569815-7111688999997-89859-9973998999999971221127840328989998605778899997699069
Q gi|254780716|r 5 DIGIIGL-GSMGSNLSLNILD-KGFRL-AVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDP 81 (475)
Q Consensus 5 ~IGiIGL-G~MG~~mA~nL~~-~G~~V-~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~ 81 (475)
+|++.|. |+||+.+++.+.+ .++.+ .+.++...... ..+..++.. +.+-
T Consensus 2 kV~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~---------------~~d~~~~~~------------~~~~- 53 (122)
T pfam01113 2 KVAVVGASGRMGRELIKAILEAPDFELVAAVDRPGSSLL---------------GSDAGELAG------------PLGV- 53 (122)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCC---------------CCCCCCCCC------------CCCC-
T ss_conf 899988988789999999985899689999943896122---------------543100146------------7871-
Q ss_pred HHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEE
Q ss_conf 99999999720789989996798657899999999984799430
Q gi|254780716|r 82 VDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFI 125 (475)
Q Consensus 82 v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fi 125 (475)
.+...+.....+-|++||.| +|+.+....+.+.+.|+.++
T Consensus 54 --~~~~~~~~~~~~~DVvIDFS--~p~~~~~~~~~~~~~~~~~V 93 (122)
T pfam01113 54 --PVTDDLEEVLADADVLIDFT--TPEATLENLELALKHGKPLV 93 (122)
T ss_pred --EECCCHHHHCCCCCEEEEEC--CHHHHHHHHHHHHHCCCCEE
T ss_conf --11244777515788899906--87899999999996799889
No 250
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=96.05 E-value=0.15 Score=30.92 Aligned_cols=44 Identities=11% Similarity=0.183 Sum_probs=33.4
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHCC
Q ss_conf 805698157111688999997898-59997399899999997122
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGF-RLAVYNKDFELTDVFIKKIS 47 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~-~V~vydr~~~~~~~l~~~~~ 47 (475)
.++.++|.|.+|...+.-+...|. +|.+-|++++|.+...+-++
T Consensus 122 ~~V~V~G~G~iGl~~~~~a~~~Ga~~Vi~~d~~~~rl~~a~~~Ga 166 (280)
T TIGR03366 122 RRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRRELALSFGA 166 (280)
T ss_pred CEEEEEECCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCC
T ss_conf 989999078689999999998499879999199899999997399
No 251
>COG0362 Gnd 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]
Probab=96.05 E-value=0.03 Score=36.10 Aligned_cols=106 Identities=14% Similarity=0.256 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC---CHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCCCCCCHHHH
Q ss_conf 9999999999999999999999996110145667---9889999851894685378999999987088852000798999
Q gi|254780716|r 320 VKDLENALYASTILSFTQGFWVIGKSSEKYSWSL---SLATIARIWRAGCIIRSQILNDIVKSLTEDPSSTNLLNIPSIS 396 (475)
Q Consensus 320 i~~L~~a~~~~~i~syaQGf~ll~~as~~y~w~l---~l~~ia~iW~~GCIIrs~lL~~i~~~~~~~~~l~~Ll~~~~~~ 396 (475)
++.+++.+-.+-+-..+....+|+.. .++ .+++|+.-|+.| -+.|.|++-..++|........--+.+.|.
T Consensus 182 VKmVHNGIEYgDMQlIaE~Y~ilk~~-----lgls~~ei~~vF~~WN~g-eL~SYLIeIT~~IL~~kD~~~~kplvd~IL 255 (473)
T COG0362 182 VKMVHNGIEYGDMQLIAEAYDILKDG-----LGLSAEEIAEVFEEWNKG-ELDSYLIEITADILRKKDEEGGKPLVDKIL 255 (473)
T ss_pred EEEEECCCHHHHHHHHHHHHHHHHHH-----CCCCHHHHHHHHHHHCCC-CCHHHHHHHHHHHHHHCCCCCCCCHHHHHH
T ss_conf 21014571488899999999999975-----499989999999986267-604799999999986408666873699998
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH-HHHHH
Q ss_conf 9999524769999999998399847999999-99986
Q gi|254780716|r 397 EKVKKTIPSLRRIVVTCTENGYPVPSLSAAL-SYFDT 432 (475)
Q Consensus 397 ~~i~~~~~~lr~vv~~~i~~gip~P~lsssL-~y~~~ 432 (475)
+.-.....+ ||++..+.+.|+|+|.+..|. +.+.+
T Consensus 256 D~AgQKGTG-kWt~~~AldlGvP~t~I~eaVfAR~lS 291 (473)
T COG0362 256 DKAGQKGTG-KWTVISALDLGVPLTLITEAVFARYLS 291 (473)
T ss_pred HHHCCCCCC-HHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 873478765-413987997199808999999999998
No 252
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.03 E-value=0.091 Score=32.59 Aligned_cols=80 Identities=16% Similarity=0.285 Sum_probs=58.2
Q ss_pred EEEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 05698--1571116889999978985999739989999999712211278403289899986057788999976990699
Q gi|254780716|r 5 DIGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 5 ~IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
++.+| |-+-+|..+|+.|++.|++|.+.||+.++.+++.++... .+ ..+-.-|.+.+.+
T Consensus 7 KvalVTGgs~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~---~~----------------~~~~~Dv~~~~~i 67 (261)
T PRK08265 7 KVAIVTGGATLIGAAVARALVAAGACVAILDIDADNGAAVAASLGE---RA----------------RFIATDITDDAAI 67 (261)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCC---CE----------------EEEECCCCCHHHH
T ss_conf 9899948776899999999998799899997988999999998199---72----------------8998138999999
Q ss_pred HHHHHHHHHCCCCCCEEEECC
Q ss_conf 999999972078998999679
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~s 103 (475)
+++++.+......=|++|...
T Consensus 68 ~~~~~~~~~~fG~iDiLVNNA 88 (261)
T PRK08265 68 ERAVATAVARFGGLDILVNLA 88 (261)
T ss_pred HHHHHHHHHHHCCCCEEEECC
T ss_conf 999999999819987899857
No 253
>PRK07479 consensus
Probab=96.01 E-value=0.096 Score=32.41 Aligned_cols=83 Identities=14% Similarity=0.291 Sum_probs=59.6
Q ss_pred EEEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 05698--1571116889999978985999739989999999712211278403289899986057788999976990699
Q gi|254780716|r 5 DIGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 5 ~IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
++.+| |-+-+|..+|+.|++.|++|.+.||++++.+++.++......++. .+-.-|.+.+.+
T Consensus 6 K~alITGgs~GIG~a~a~~la~~G~~V~i~~~~~~~~~~~~~~l~~~g~~~~----------------~~~~Dv~~~~~~ 69 (252)
T PRK07479 6 KVAIVTGAGSGFGEGIAKRFAREGAKVVVADLNAAAAERVASEIADAGGNAI----------------AVAADVSRGADV 69 (252)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEE----------------EEECCCCCHHHH
T ss_conf 8899938876899999999998799999997989999999999985399789----------------999258999999
Q ss_pred HHHHHHHHHCCCCCCEEEECC
Q ss_conf 999999972078998999679
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~s 103 (475)
++.++.+.....+=|++|...
T Consensus 70 ~~~~~~~~~~~G~iD~lVnnA 90 (252)
T PRK07479 70 EALVEAALEAFGRVDIVVNNA 90 (252)
T ss_pred HHHHHHHHHHHCCCCEEEECC
T ss_conf 999999999819985999899
No 254
>PRK06172 short chain dehydrogenase; Provisional
Probab=96.01 E-value=0.09 Score=32.62 Aligned_cols=83 Identities=16% Similarity=0.231 Sum_probs=58.6
Q ss_pred EEEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 05698--1571116889999978985999739989999999712211278403289899986057788999976990699
Q gi|254780716|r 5 DIGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 5 ~IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
++.+| |-+-+|.++|+.|++.|.+|.+.||++++.++..++.......+ ..+-.-|.+.+.+
T Consensus 8 KvalVTGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~g~~~----------------~~~~~Dvs~~~~v 71 (253)
T PRK06172 8 QVALVTGGAAGIGRATAIAFAREGAKVVVADRDAAGGEETVALIREAGGEA----------------LFIACDVTRDAEV 71 (253)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCE----------------EEEECCCCCHHHH
T ss_conf 989993757689999999999879989999798899999999999649937----------------9998189999999
Q ss_pred HHHHHHHHHCCCCCCEEEECC
Q ss_conf 999999972078998999679
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~s 103 (475)
+..++++.....+=|++|...
T Consensus 72 ~~~~~~~~~~~G~iDiLVNNA 92 (253)
T PRK06172 72 KALVEKTIAAYGRLDYAFNNA 92 (253)
T ss_pred HHHHHHHHHHCCCCCEEEECC
T ss_conf 999999999829999999898
No 255
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.01 E-value=0.081 Score=32.94 Aligned_cols=82 Identities=17% Similarity=0.312 Sum_probs=58.1
Q ss_pred EEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 5698--15711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 6 IGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 6 IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
+.+| |-+-+|..+|+.|++.|.+|.+.+|+.++.+++.++.......+. .+-.-|.+.+.++
T Consensus 11 valVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~ei~~~g~~~~----------------~~~~Dvt~~~~v~ 74 (253)
T PRK05867 11 RALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVV----------------PVCCDVSQHQQVT 74 (253)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEE----------------EEECCCCCHHHHH
T ss_conf 899979565999999999998699999997988999999999984599199----------------9983699999999
Q ss_pred HHHHHHHHCCCCCCEEEECC
Q ss_conf 99999972078998999679
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~s 103 (475)
+.++.+...+..=|++|...
T Consensus 75 ~~v~~~~~~~G~iDiLVnNA 94 (253)
T PRK05867 75 SMLDQVTAELGGIDIAVCNA 94 (253)
T ss_pred HHHHHHHHHHCCCCEEEECC
T ss_conf 99999999959985999899
No 256
>PRK09466 metL bifunctional aspartate kinase II/homoserine dehydrogenase II; Provisional
Probab=96.01 E-value=0.16 Score=30.79 Aligned_cols=18 Identities=17% Similarity=0.392 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHHCCCC
Q ss_conf 247699999999983998
Q gi|254780716|r 402 TIPSLRRIVVTCTENGYP 419 (475)
Q Consensus 402 ~~~~lr~vv~~~i~~gip 419 (475)
..+..|+++.++-+.|..
T Consensus 670 G~DvarKllILARe~g~~ 687 (810)
T PRK09466 670 GRDVMRKLLILAREAGLE 687 (810)
T ss_pred CCCHHHHHHHHHHHHCCC
T ss_conf 975899999999985877
No 257
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=96.00 E-value=0.085 Score=32.79 Aligned_cols=82 Identities=17% Similarity=0.265 Sum_probs=58.3
Q ss_pred EEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 5698--15711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 6 IGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 6 IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
+.+| |-+-+|..+|..|++.|.+|.+.+|+.++.++..++-......+. .+-.-|.+.+.++
T Consensus 13 valVTGas~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~l~~~g~~~~----------------~~~~Dv~~~~~~~ 76 (255)
T PRK06113 13 CAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAF----------------ACRCDITSEQELS 76 (255)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEE----------------EEECCCCCHHHHH
T ss_conf 899958877899999999998799999996988999999999996599089----------------9983689999999
Q ss_pred HHHHHHHHCCCCCCEEEECC
Q ss_conf 99999972078998999679
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~s 103 (475)
..++.+......=|++|...
T Consensus 77 ~~v~~~~~~~G~iDilVnNA 96 (255)
T PRK06113 77 ALADFAVSKLGKVDILVNNA 96 (255)
T ss_pred HHHHHHHHHHCCCCEEEECC
T ss_conf 99999999819988999878
No 258
>PRK09242 tropinone reductase; Provisional
Probab=95.98 E-value=0.14 Score=31.28 Aligned_cols=84 Identities=12% Similarity=0.174 Sum_probs=58.0
Q ss_pred EEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 5698--15711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 6 IGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 6 IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
+.+| |-+-+|..+|+.|++.|.+|.+.+|+.++.+...++.......... ..+-.-|.+.+.++
T Consensus 12 ~alITGgs~GIG~a~a~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~~~~~~~--------------~~~~~Dv~~~~~~~ 77 (258)
T PRK09242 12 TALITGASKGIGLAIARELLGLGADVLIVARDADALAQARDELAEEFPEREL--------------HGLAADVSDDEDRR 77 (258)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCEE--------------EEEEEECCCHHHHH
T ss_conf 9999484868999999999987998999969889999999999864479729--------------99993079999999
Q ss_pred HHHHHHHHCCCCCCEEEECC
Q ss_conf 99999972078998999679
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~s 103 (475)
++++.+.....+=|++|...
T Consensus 78 ~~~~~~~~~~g~iDiLVnnA 97 (258)
T PRK09242 78 AILDWVEDHWDGLHILVNNA 97 (258)
T ss_pred HHHHHHHHHCCCCCEEEECC
T ss_conf 99999999749997999899
No 259
>PRK07062 short chain dehydrogenase; Provisional
Probab=95.97 E-value=0.11 Score=32.08 Aligned_cols=82 Identities=16% Similarity=0.204 Sum_probs=58.8
Q ss_pred EEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCE--EEEECCCHHH
Q ss_conf 5698--15711168899999789859997399899999997122112784032898999860577889--9997699069
Q gi|254780716|r 6 IGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRK--ILMMVTDGDP 81 (475)
Q Consensus 6 IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~--Iil~vp~g~~ 81 (475)
+.+| |-+-+|.++|+.|++.|.+|.+.+|+.++.++..++....... .++ +-.-|.+.+.
T Consensus 10 ~alITG~s~GIG~a~a~~la~~Ga~Vvi~~r~~~~l~~~~~~l~~~~~~----------------~~~~~~~~Dvt~~~~ 73 (265)
T PRK07062 10 VAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPG----------------ARLLAARCDVLDEAD 73 (265)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCC----------------CEEEEEECCCCCHHH
T ss_conf 8999575779999999999987999999979889999999999873699----------------659999757999999
Q ss_pred HHHHHHHHHHCCCCCCEEEECC
Q ss_conf 9999999972078998999679
Q gi|254780716|r 82 VDQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 82 v~~vi~~l~~~l~~g~iiID~s 103 (475)
+++.++.+......=|++|...
T Consensus 74 v~~~v~~~~~~~G~iDiLVnNA 95 (265)
T PRK07062 74 VAAFAAAVEARFGGVDMLVNNA 95 (265)
T ss_pred HHHHHHHHHHHHCCCCEEEECC
T ss_conf 9999999999839988899778
No 260
>PRK04663 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.97 E-value=0.16 Score=30.68 Aligned_cols=115 Identities=10% Similarity=0.133 Sum_probs=60.0
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCC--EEEEEECCH--HHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEE-
Q ss_conf 998805698157111688999997898--599973998--999999971221127840328989998605778899997-
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGF--RLAVYNKDF--ELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMM- 75 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~--~V~vydr~~--~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~- 75 (475)
|+| |.++|+|.=|.+.|+-|+++|. .|.++|... ...+.+ .++... ..+.... +. ++..+.|+.+
T Consensus 7 ~Kk--vlV~GlG~sG~s~a~~L~~~~~~~~v~~~D~~~~~~~~~~l-~~~~~~---~~g~~~~-~~---l~~~d~vV~SP 76 (438)
T PRK04663 7 IKN--VVVVGLGITGLSVVKHLRKTQPQLTVKVIDTRETPPGQEQL-PEDVEL---HSGGWNQ-DW---LAEADLVVTNP 76 (438)
T ss_pred CCE--EEEEEECHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHH-HCCCEE---EECCCCH-HH---HCCCCEEEECC
T ss_conf 974--99990678589999999966998469996398893688762-069769---7278896-78---36899999899
Q ss_pred -CCCHH-HHHHHHH---------HHHHCCCCCCEEEECCCCCHHH-HHHHHHHHHHCCCCEE
Q ss_conf -69906-9999999---------9972078998999679865789-9999999984799430
Q gi|254780716|r 76 -VTDGD-PVDQLID---------KLKPLLSPEDILLDGGNSHFCD-TQIRSLQLSEKGIYFI 125 (475)
Q Consensus 76 -vp~g~-~v~~vi~---------~l~~~l~~g~iiID~sts~~~~-t~~~~~~l~~kgi~fi 125 (475)
+|... .+....+ ++.....+..+|--+||..-.+ |.-.+..|+..|....
T Consensus 77 GI~~~~p~~~~a~~~~i~i~~eiel~~~~~~~~iIaVTGTnGKTTTtsli~~iL~~~g~~~~ 138 (438)
T PRK04663 77 GIALATPEIQPVLAKGIPVVGDIELFAWAVDKPVIAITGSNGKSTVTDLTGVMAKAAGVKVA 138 (438)
T ss_pred CCCCCCHHHHHHHHCCCCEECHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCE
T ss_conf 76998989999998699370388999764589789994899828999999999982899706
No 261
>PRK08263 short chain dehydrogenase; Provisional
Probab=95.97 E-value=0.16 Score=30.68 Aligned_cols=83 Identities=17% Similarity=0.244 Sum_probs=60.1
Q ss_pred CCCCEEEEE-EC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCC
Q ss_conf 998805698-15-7111688999997898599973998999999971221127840328989998605778899997699
Q gi|254780716|r 1 MKQADIGII-GL-GSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTD 78 (475)
Q Consensus 1 M~k~~IGiI-GL-G~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~ 78 (475)
|+.. +-|| |- .-+|..+|+.|+++|++|.+.+|+.++.+++.++.. ..+ ..+-+-|.+
T Consensus 1 m~gK-v~lITGassGIG~a~A~~la~~G~~Vv~~~R~~~~l~~l~~~~~---~~~----------------~~~~~Dvtd 60 (275)
T PRK08263 1 MMGK-VWFITGASRGFGREWTEAALERGDRVVATARDTATLADLAERYG---DAL----------------LPLALDVTD 60 (275)
T ss_pred CCCC-EEEEECCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCC---CCE----------------EEEEEECCC
T ss_conf 9899-89994674399999999999879989999798999999999759---967----------------999964899
Q ss_pred HHHHHHHHHHHHHCCCCCCEEEECC
Q ss_conf 0699999999972078998999679
Q gi|254780716|r 79 GDPVDQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 79 g~~v~~vi~~l~~~l~~g~iiID~s 103 (475)
.+.++++++.+......=|++|...
T Consensus 61 ~~~v~~~v~~~~~~~G~iDiLVNNA 85 (275)
T PRK08263 61 RAAVFAAVEQAVKHFGRLDIVVNNA 85 (275)
T ss_pred HHHHHHHHHHHHHHHCCCCEEEECC
T ss_conf 9999999999999849987899888
No 262
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.97 E-value=0.1 Score=32.28 Aligned_cols=83 Identities=19% Similarity=0.306 Sum_probs=59.3
Q ss_pred EEEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 05698--1571116889999978985999739989999999712211278403289899986057788999976990699
Q gi|254780716|r 5 DIGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 5 ~IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
++.+| |-+-+|.++|+.|+++|++|.+.+|+.++.++..++......++ ..+-.-+.+.+.+
T Consensus 5 K~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~g~~~----------------~~~~~D~~~~~~v 68 (258)
T PRK12429 5 KTALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAKAAEAIKKAGGKA----------------IGVAMDVTDEEAI 68 (258)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCE----------------EEEECCCCCHHHH
T ss_conf 989994887589999999999879999999798899999999998449918----------------9998358999999
Q ss_pred HHHHHHHHHCCCCCCEEEECC
Q ss_conf 999999972078998999679
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~s 103 (475)
+++++.+.....+=|++|...
T Consensus 69 ~~~~~~~~~~~g~iDiLVnnA 89 (258)
T PRK12429 69 NAGIDKVVETFGGVDILVNNA 89 (258)
T ss_pred HHHHHHHHHHHCCCCEEEECC
T ss_conf 999999999829970999899
No 263
>PRK06139 short chain dehydrogenase; Provisional
Probab=95.95 E-value=0.086 Score=32.77 Aligned_cols=77 Identities=19% Similarity=0.239 Sum_probs=56.0
Q ss_pred CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHH
Q ss_conf 57111688999997898599973998999999971221127840328989998605778899997699069999999997
Q gi|254780716|r 11 LGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQLIDKLK 90 (475)
Q Consensus 11 LG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi~~l~ 90 (475)
-+-+|..+|+.|+++|++|.+.+|+.++.+++.++.......+. .+-.-|.+.+++++.++.+.
T Consensus 15 SsGIG~aiA~~~A~~Ga~Vvl~~R~~~~L~~~a~e~~~~G~~~~----------------~v~~DVsd~~~v~~~~~~~~ 78 (324)
T PRK06139 15 SSGIGRATAEAFARRGARLVLAARDEEALFEVAEECRALGAEVL----------------VVPTDVTHADQVQALATQAA 78 (324)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEE----------------EEECCCCCHHHHHHHHHHHH
T ss_conf 54999999999998799899998999999999999995499489----------------99766788578999999999
Q ss_pred HCCCCCCEEEECC
Q ss_conf 2078998999679
Q gi|254780716|r 91 PLLSPEDILLDGG 103 (475)
Q Consensus 91 ~~l~~g~iiID~s 103 (475)
....+=|++|...
T Consensus 79 ~~~G~IDiLVNNA 91 (324)
T PRK06139 79 SFLGRIDVWFNNV 91 (324)
T ss_pred HHCCCCCEEEECC
T ss_conf 9749987886457
No 264
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=95.95 E-value=0.049 Score=34.53 Aligned_cols=36 Identities=17% Similarity=0.141 Sum_probs=18.0
Q ss_pred HHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECC
Q ss_conf 72078998999679865789999999998479943067
Q gi|254780716|r 90 KPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGI 127 (475)
Q Consensus 90 ~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~ 127 (475)
...+++|.+++-. .++....++.+.+.++|+..+.+
T Consensus 80 ~~~lr~g~~Lis~--L~pa~~~el~~~L~~~~vtaiA~ 115 (510)
T PRK09424 80 IALLREGATLVSF--IWPAQNPELMEKLAARGITVLAM 115 (510)
T ss_pred HHHCCCCCEEEEE--CCCCCCHHHHHHHHHCCCCEEEE
T ss_conf 9734799899997--68667989999999759928975
No 265
>PRK07109 short chain dehydrogenase; Provisional
Probab=95.94 E-value=0.099 Score=32.32 Aligned_cols=81 Identities=16% Similarity=0.258 Sum_probs=59.5
Q ss_pred EEEEE-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHH
Q ss_conf 56981-57111688999997898599973998999999971221127840328989998605778899997699069999
Q gi|254780716|r 6 IGIIG-LGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQ 84 (475)
Q Consensus 6 IGiIG-LG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~ 84 (475)
|=|-| -+-+|..+|+.++++|++|.+.+|++++.+++.++-...+..+ ..+-+-|.+.+++++
T Consensus 11 VvITGASsGIGra~A~~fA~~Ga~Vvl~aR~~~~L~~~a~e~~~~G~~~----------------~~~~~DVsd~~~v~~ 74 (338)
T PRK07109 11 VVITGASAGVGRATARAFARRGAKVVLLARGEEGLEGLAAEIRAAGGEA----------------LAVVADVADAEAVQA 74 (338)
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEE----------------EEEEEECCCHHHHHH
T ss_conf 9994843499999999999879989999899999999999999639818----------------999801799999999
Q ss_pred HHHHHHHCCCCCCEEEEC
Q ss_conf 999997207899899967
Q gi|254780716|r 85 LIDKLKPLLSPEDILLDG 102 (475)
Q Consensus 85 vi~~l~~~l~~g~iiID~ 102 (475)
.++.+...+.+=|++|..
T Consensus 75 ~~~~~~~~~G~IDvlVNN 92 (338)
T PRK07109 75 AADRAEEELGPIDTWVNN 92 (338)
T ss_pred HHHHHHHHHCCCCEEEEC
T ss_conf 999999984998888654
No 266
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=95.94 E-value=0.074 Score=33.23 Aligned_cols=102 Identities=20% Similarity=0.262 Sum_probs=63.9
Q ss_pred EEEEEC-CHHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHH---CCCC--CCCCEECCCHHHHHHHCCCCCEEEEE
Q ss_conf 569815-7111688999997898----599973998999999971---2211--27840328989998605778899997
Q gi|254780716|r 6 IGIIGL-GSMGSNLSLNILDKGF----RLAVYNKDFELTDVFIKK---ISGL--SQKVIVTKNLEQMVEAVCKPRKILMM 75 (475)
Q Consensus 6 IGiIGL-G~MG~~mA~nL~~~G~----~V~vydr~~~~~~~l~~~---~~~~--~~~~~~~~s~~e~v~~l~~pr~Iil~ 75 (475)
|++||. |+-|..+|..|+.++. ++..+|+++++.+..+-. .... ..++....+..+ .++..++|++.
T Consensus 1 V~IIGA~G~VG~~~a~~l~~~~~~~~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~v~~~~~~~~---~~~daDvVVit 77 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYE---AFKDADVVIIT 77 (263)
T ss_pred CEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEECCCHHH---HHCCCCEEEEE
T ss_conf 989877977999999999828999998899995898720879999985452357873997487389---83799899990
Q ss_pred CC---------------CHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHH
Q ss_conf 69---------------906999999999720789989996798657899999
Q gi|254780716|r 76 VT---------------DGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIR 113 (475)
Q Consensus 76 vp---------------~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~ 113 (475)
-- +.+.+.++...+..+. |+.++|-.+| |-|+...
T Consensus 78 ag~~~k~g~~R~dll~~N~~I~~~i~~~i~~~~-p~a~iivvtN--Pvdv~t~ 127 (263)
T cd00650 78 AGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKYS-PDAWIIVVSN--PVDIITY 127 (263)
T ss_pred CCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHCC-CCCEEEECCC--CHHHHHH
T ss_conf 577889998765664032889999988887329-9836997389--4899999
No 267
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=95.93 E-value=0.1 Score=32.25 Aligned_cols=82 Identities=15% Similarity=0.259 Sum_probs=59.1
Q ss_pred EEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 5698--15711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 6 IGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 6 IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
+.+| |-+-+|..+|+.|++.|.+|.+.+|+.++.++..++.......+. .+-.-|.+.+.++
T Consensus 14 valVTG~s~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~l~~~g~~~~----------------~~~~Dv~~~~~v~ 77 (259)
T PRK08213 14 TALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDAL----------------WLAADVADEADIE 77 (259)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEE----------------EEECCCCCHHHHH
T ss_conf 899948776899999999998699999997988999999999995499589----------------9982689999999
Q ss_pred HHHHHHHHCCCCCCEEEECC
Q ss_conf 99999972078998999679
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~s 103 (475)
.+++.+.....+=|++|...
T Consensus 78 ~~v~~~~~~~G~iDiLVNNA 97 (259)
T PRK08213 78 RLAEETLERFGHIDILVNNA 97 (259)
T ss_pred HHHHHHHHHHCCCCEEEECC
T ss_conf 99999999839998999899
No 268
>PRK12743 acetoin dehydrogenase; Provisional
Probab=95.93 E-value=0.17 Score=30.54 Aligned_cols=85 Identities=19% Similarity=0.271 Sum_probs=57.2
Q ss_pred CCCCEEEEE--ECCHHHHHHHHHHHHCCCEEEEE-ECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECC
Q ss_conf 998805698--15711168899999789859997-399899999997122112784032898999860577889999769
Q gi|254780716|r 1 MKQADIGII--GLGSMGSNLSLNILDKGFRLAVY-NKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVT 77 (475)
Q Consensus 1 M~k~~IGiI--GLG~MG~~mA~nL~~~G~~V~vy-dr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp 77 (475)
|+| |.+| |-+-+|..+|+.|++.|.+|.+. +++.+..++..++....+..+. .+-.-|.
T Consensus 1 M~K--ValITGgs~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~----------------~~~~Dv~ 62 (253)
T PRK12743 1 MAQ--VAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVVSHGVRAE----------------IVHLDLS 62 (253)
T ss_pred CCC--EEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEE----------------EEEECCC
T ss_conf 999--8999075889999999999987998999748997999999999994599189----------------9990489
Q ss_pred CHHHHHHHHHHHHHCCCCCCEEEECC
Q ss_conf 90699999999972078998999679
Q gi|254780716|r 78 DGDPVDQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 78 ~g~~v~~vi~~l~~~l~~g~iiID~s 103 (475)
+.+.++++++.+...+..=|++|...
T Consensus 63 ~~~~~~~~~~~~~~~~G~iDilVNnA 88 (253)
T PRK12743 63 NLPEGAQAIEKLIQRLGRLDVLVNNA 88 (253)
T ss_pred CHHHHHHHHHHHHHHCCCCCEEEECC
T ss_conf 99999999999999819998999899
No 269
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=95.91 E-value=0.17 Score=30.50 Aligned_cols=103 Identities=12% Similarity=0.226 Sum_probs=60.6
Q ss_pred CCEEEEEECCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHH---HCCCCCCC-CEECCCHHHHHHHCCCCCEEEEEC
Q ss_conf 8805698157111688999997898--59997399899999997---12211278-403289899986057788999976
Q gi|254780716|r 3 QADIGIIGLGSMGSNLSLNILDKGF--RLAVYNKDFELTDVFIK---KISGLSQK-VIVTKNLEQMVEAVCKPRKILMMV 76 (475)
Q Consensus 3 k~~IGiIGLG~MG~~mA~nL~~~G~--~V~vydr~~~~~~~l~~---~~~~~~~~-~~~~~s~~e~v~~l~~pr~Iil~v 76 (475)
..+|++||.|..|.++|.-|+.+|. ++..||+++++++.... .+...... .....+.++ ++..++|++..
T Consensus 6 ~~KI~IIGaG~VG~~~a~~l~~~~l~~el~LiD~~~~~a~g~a~Dl~h~~~~~~~~~i~~gdy~~----~~daDvVVitA 81 (315)
T PRK00066 6 HNKVVLVGDGAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGDYSD----CKDADLVVITA 81 (315)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEECCHHH----HCCCCEEEECC
T ss_conf 98499999798899999999866998889998089871078999888541236884797399999----67999999899
Q ss_pred CC----H-----------HHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHH
Q ss_conf 99----0-----------699999999972078998999679865789999
Q gi|254780716|r 77 TD----G-----------DPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQI 112 (475)
Q Consensus 77 p~----g-----------~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~ 112 (475)
.. | +.+.++..++.++ .|..+++-.| +|-|...
T Consensus 82 G~~~k~g~tR~dll~~N~~I~~~i~~~i~~~-~p~~i~ivvt--NPvDvmt 129 (315)
T PRK00066 82 GAPQKPGETRLDLVEKNLKIFKSIVGEVMAS-GFDGIFLVAS--NPVDILT 129 (315)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-CCCEEEEEEC--CCHHHHH
T ss_conf 9989999987899987899999988776424-8853999936--9189999
No 270
>PRK03806 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.91 E-value=0.17 Score=30.50 Aligned_cols=114 Identities=18% Similarity=0.153 Sum_probs=63.6
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHH--HHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEE--CCCH
Q ss_conf 8056981571116889999978985999739989--99999971221127840328989998605778899997--6990
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFE--LTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMM--VTDG 79 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~--~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~--vp~g 79 (475)
.+|.|+|+|.=|.+.|+-|.++|++|.+||...+ ..+.+. ++.. -..+... .+. +...+.|+.+ +|..
T Consensus 7 k~v~V~GlG~sG~s~~~~L~~~G~~v~~~D~~~~~~~~~~l~-~~~~---~~~g~~~-~~~---~~~~d~vV~SPGI~~~ 78 (438)
T PRK03806 7 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLP-ENVE---RHTGSLN-DEW---LLAADLIVASPGIALA 78 (438)
T ss_pred CEEEEEEECHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHH-CCCC---EEECCCC-HHH---HCCCCEEEECCCCCCC
T ss_conf 989999457888999999997899699998999900578864-5884---6657779-668---0679999989978998
Q ss_pred HH-HHHHHH---------HHHHCCCCCCEEEE-CCCCCHHHHHHHHHHHHHCCCCEE
Q ss_conf 69-999999---------99720789989996-798657899999999984799430
Q gi|254780716|r 80 DP-VDQLID---------KLKPLLSPEDILLD-GGNSHFCDTQIRSLQLSEKGIYFI 125 (475)
Q Consensus 80 ~~-v~~vi~---------~l~~~l~~g~iiID-~sts~~~~t~~~~~~l~~kgi~fi 125 (475)
.+ +....+ ++.-...+..+|-- +||---..|.-.+..|++.|....
T Consensus 79 ~p~~~~a~~~~i~i~seiel~~~~~~~~iIaVTGTnGKTTTt~li~~iL~~~g~~~~ 135 (438)
T PRK03806 79 HPSLSAAADAGVEIVGDIELFCREAQAPIVAITGSNGKSTVTTLVGEMAKAAGVNVG 135 (438)
T ss_pred CHHHHHHHHCCCCEEEHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEE
T ss_conf 989999998799477699997222799889994899848999999999986599756
No 271
>PRK07201 short chain dehydrogenase; Provisional
Probab=95.91 E-value=0.12 Score=31.60 Aligned_cols=36 Identities=25% Similarity=0.419 Sum_probs=23.4
Q ss_pred ECCHHHHHHHHHHHHC-CCEEEEEECC--HHHHHHHHHH
Q ss_conf 1571116889999978-9859997399--8999999971
Q gi|254780716|r 10 GLGSMGSNLSLNILDK-GFRLAVYNKD--FELTDVFIKK 45 (475)
Q Consensus 10 GLG~MG~~mA~nL~~~-G~~V~vydr~--~~~~~~l~~~ 45 (475)
+.|-.|..+...|++. +-+|++-=|. .++.+++.+.
T Consensus 8 aTGFLG~~LL~~LL~~~~a~V~cLVR~~s~~r~~~~~~~ 46 (663)
T PRK07201 8 GTGFIGRRLVSRLLDRPGARVHVLVRRQSLGRFERLAEY 46 (663)
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHH
T ss_conf 842889999999984899989999787749999999997
No 272
>pfam00208 ELFV_dehydrog Glutamate/Leucine/Phenylalanine/Valine dehydrogenase.
Probab=95.90 E-value=0.15 Score=30.98 Aligned_cols=114 Identities=18% Similarity=0.252 Sum_probs=66.9
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEE--------EEC---CHHHHHHHHHHCCCCCCCCE----ECCCHHHHHHHCCC
Q ss_conf 8056981571116889999978985999--------739---98999999971221127840----32898999860577
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAV--------YNK---DFELTDVFIKKISGLSQKVI----VTKNLEQMVEAVCK 68 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~v--------ydr---~~~~~~~l~~~~~~~~~~~~----~~~s~~e~v~~l~~ 68 (475)
..|.+=|.|+.|+..|+.|.+.|.+|.. ||. +.+...++.++......... ..-+.+++.. ..
T Consensus 33 ~~v~IqGfGnVG~~~a~~l~~~GakvvavsD~~G~i~~~~Gldi~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~ 110 (237)
T pfam00208 33 KTVAVQGFGNVGSYAAEKLLELGAKVVAVSDSSGYIYDPNGIDIEELLELKEEGGGRVVEYAGSGAEYISGEELWE--ID 110 (237)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCHHHHHHHHHHHCCEEECCCCCCCEECCCCCCCC--CC
T ss_conf 9999989889999999999987996999982876799999999999999999719843124665753448710004--76
Q ss_pred CCEEEEECCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEEC
Q ss_conf 8899997699069999999997207899899967986578999999999847994306
Q gi|254780716|r 69 PRKILMMVTDGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIG 126 (475)
Q Consensus 69 pr~Iil~vp~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid 126 (475)
+++.+-|-..+....+.. +.+ +-.+|+.+.|... |.+..+.|.++||.++=
T Consensus 111 ~DIliPaA~~~~I~~~na----~~i-~ak~I~EgAN~p~--t~eA~~~L~~rgI~viP 161 (237)
T pfam00208 111 CDILVPCATQNEINEENA----KLI-KAKAVVEGANMPT--TPEADEILEERGILYAP 161 (237)
T ss_pred CCEEEECCCCCCCCHHHH----HHC-CCCEEEECCCCCC--CHHHHHHHHHCCCEEEC
T ss_conf 668864455688998999----862-7548975378988--97899999988998968
No 273
>PRK10538 3-hydroxy acid dehydrogenase; Provisional
Probab=95.88 E-value=0.12 Score=31.70 Aligned_cols=73 Identities=11% Similarity=0.263 Sum_probs=54.2
Q ss_pred CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf 71116889999978985999739989999999712211278403289899986057788999976990699999999972
Q gi|254780716|r 12 GSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQLIDKLKP 91 (475)
Q Consensus 12 G~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi~~l~~ 91 (475)
+-+|..+|+.|+++|++|.+.+|+.++.+++.++.. .++. .+-.-|.+.+.++++++.+..
T Consensus 10 sGIG~a~A~~la~~Ga~Vv~~~r~~~~l~~l~~~lg---~~~~----------------~~~~Dvsd~~~v~~~~~~~~~ 70 (248)
T PRK10538 10 AGFGECITRRFIQNGHKVIATGRRQERLQELKDELG---DNLY----------------IAQLDVRNRAAIEEMLASLPA 70 (248)
T ss_pred CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHC---CCEE----------------EEEEECCCHHHHHHHHHHHHH
T ss_conf 699999999999879999999899999999999848---8679----------------999734888999999999999
Q ss_pred CCCCCCEEEECC
Q ss_conf 078998999679
Q gi|254780716|r 92 LLSPEDILLDGG 103 (475)
Q Consensus 92 ~l~~g~iiID~s 103 (475)
...+=|++|...
T Consensus 71 ~~g~iDiLVnNA 82 (248)
T PRK10538 71 EWRNIDILVNNA 82 (248)
T ss_pred HCCCCCEEEECC
T ss_conf 709975999778
No 274
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=95.88 E-value=0.1 Score=32.27 Aligned_cols=75 Identities=17% Similarity=0.212 Sum_probs=53.8
Q ss_pred ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHH
Q ss_conf 15711168899999789859997399899999997122112784032898999860577889999769906999999999
Q gi|254780716|r 10 GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQLIDKL 89 (475)
Q Consensus 10 GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi~~l 89 (475)
|-+-+|..+|+.|++.|.+|.+.+|++++.+++.++.. ..+. .+-.-+.+.+.+++.++.+
T Consensus 14 as~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~~~~~~---~~~~----------------~~~~Dv~~~~~~~~~~~~~ 74 (263)
T PRK06200 14 GGSGIGRALVERFLAEGARVAVLERSAEKCASLRQRFG---DDVL----------------VVEGDVTSYADNQRAVAQT 74 (263)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHC---CCEE----------------EEECCCCCHHHHHHHHHHH
T ss_conf 66799999999999879999999799999999999818---8646----------------8717999999999999999
Q ss_pred HHCCCCCCEEEECC
Q ss_conf 72078998999679
Q gi|254780716|r 90 KPLLSPEDILLDGG 103 (475)
Q Consensus 90 ~~~l~~g~iiID~s 103 (475)
.....+=|++|...
T Consensus 75 ~~~~G~iDiLVnnA 88 (263)
T PRK06200 75 VDRFGKLDCFVGNA 88 (263)
T ss_pred HHHHCCCCEEEECC
T ss_conf 99849988899757
No 275
>PRK06720 hypothetical protein; Provisional
Probab=95.87 E-value=0.088 Score=32.68 Aligned_cols=82 Identities=18% Similarity=0.244 Sum_probs=59.8
Q ss_pred EEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 5698--15711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 6 IGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 6 IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
+.+| |-+-+|..+|+.|++.|.+|.+.||+.++.++..++-...+..+ ..+-.-|.+.+.++
T Consensus 18 valITGa~~GIG~a~A~~la~~Ga~Vvi~d~~~~~~~~~~~~i~~~g~~a----------------~~~~~Dvs~~~~v~ 81 (169)
T PRK06720 18 VAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEA----------------LFVSYDMEKQGDWQ 81 (169)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCE----------------EEEECCCCCHHHHH
T ss_conf 99998975489999999999869989995276365999999999749953----------------78975889999999
Q ss_pred HHHHHHHHCCCCCCEEEECC
Q ss_conf 99999972078998999679
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~s 103 (475)
++++.+.....+=|++|...
T Consensus 82 ~~i~~~~~~~g~iDiLvNNA 101 (169)
T PRK06720 82 RVISITLNAFSRIDMLFQNA 101 (169)
T ss_pred HHHHHHHHHCCCCCEEEECC
T ss_conf 99999999759899899894
No 276
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF; InterPro: IPR012731 Members of the HesA/MoeB/ThiF family of proteins (IPR000594 from INTERPRO) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees. The Escherichia coli ThiF and MoeB proteins are seemingly more closely related than the E. coli ThiF and Campylobacter (for example) ThiF. This entry represents the more widely distributed clade of ThiF proteins as found in E. coli..
Probab=95.87 E-value=0.078 Score=33.08 Aligned_cols=124 Identities=16% Similarity=0.184 Sum_probs=83.8
Q ss_pred CCEEEEEECCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHC--C-CCCC-CCEECCCHHHHHHHCCCCCEEEEECC
Q ss_conf 880569815711168899999789-85999739989999999712--2-1127-84032898999860577889999769
Q gi|254780716|r 3 QADIGIIGLGSMGSNLSLNILDKG-FRLAVYNKDFELTDVFIKKI--S-GLSQ-KVIVTKNLEQMVEAVCKPRKILMMVT 77 (475)
Q Consensus 3 k~~IGiIGLG~MG~~mA~nL~~~G-~~V~vydr~~~~~~~l~~~~--~-~~~~-~~~~~~s~~e~v~~l~~pr~Iil~vp 77 (475)
.++|=+||.|-.|++.+..|+.+| -++.+.|.+.=-...|..+- . ...+ ...-++..++-+..++ |++.+.-+.
T Consensus 21 ~s~VLiiGaGgLGs~~~~~LA~AGVG~i~i~D~D~V~~SNLqRQ~Lf~e~Dv~~~~pK~e~aa~~l~~LN-~~i~v~a~~ 99 (210)
T TIGR02356 21 ASHVLIIGAGGLGSPAALYLAAAGVGTITIVDDDHVDLSNLQRQILFAEEDVGTLRPKVEAAAERLRELN-SDIRVTALK 99 (210)
T ss_pred HCCEEEEEECHHHHHHHHHHHHCCCCEEEEEECCEECHHHCHHHHHHCHHHHHCCCHHHHHHHHHHHHHC-CCCEEEEEE
T ss_conf 0865999726145689999982888378998516770101205543032442013158999999998538-896899854
Q ss_pred CHHHHHHHHHHHHHCCCCCC--EEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCC
Q ss_conf 90699999999972078998--99967986578999999999847994306754676
Q gi|254780716|r 78 DGDPVDQLIDKLKPLLSPED--ILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGG 132 (475)
Q Consensus 78 ~g~~v~~vi~~l~~~l~~g~--iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG 132 (475)
- ..+.+-++.++. .=| +||||+ =+|+.-.-....|.+.|+=+|-+.|-|-
T Consensus 100 ~-~vt~~~~~~~i~---~~DPdlVlDc~-DNf~tryliNdaC~~~~~PlI~aavvG~ 151 (210)
T TIGR02356 100 E-RVTAENLELLIE---NVDPDLVLDCT-DNFATRYLINDACQALGIPLISAAVVGF 151 (210)
T ss_pred E-CCCHHHHHHHHH---CCCCCEEEECC-CCHHHHHHHHHHHHHHCCCEEEEEEEEE
T ss_conf 2-027799999962---38996896156-6877889999999984798699988763
No 277
>PRK06914 short chain dehydrogenase; Provisional
Probab=95.86 E-value=0.17 Score=30.61 Aligned_cols=88 Identities=16% Similarity=0.227 Sum_probs=54.3
Q ss_pred CCCCEEEEEECC-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCH
Q ss_conf 998805698157-1116889999978985999739989999999712211278403289899986057788999976990
Q gi|254780716|r 1 MKQADIGIIGLG-SMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDG 79 (475)
Q Consensus 1 M~k~~IGiIGLG-~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g 79 (475)
|++..+=+-|-+ -+|..+|+.|+++|+.|.+.+|+.++.+++.++....... +...++-+-|.+.
T Consensus 1 l~~K~alITGassGIG~a~A~~la~~G~~V~~~~r~~~~~~~l~~~~~~~~~~--------------~~~~~~~~Dvtd~ 66 (280)
T PRK06914 1 MNKKIAIITGASSGFGLLTTLELAKKDYLVIATMRNLEKQENLISQAAQLNLS--------------QNIKVQQLDVTDQ 66 (280)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCC--------------CCEEEEECCCCCH
T ss_conf 95198999073449999999999987998999989889999999999964999--------------7669996889999
Q ss_pred HHHHHHHHHHHHCCCCCCEEEECC
Q ss_conf 699999999972078998999679
Q gi|254780716|r 80 DPVDQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 80 ~~v~~vi~~l~~~l~~g~iiID~s 103 (475)
+.++.+ .+.+....+=|++|...
T Consensus 67 ~~v~~~-~~~~~~~g~iDvLVNNA 89 (280)
T PRK06914 67 NSIHNF-QLFLKEYGRIDLLVNNA 89 (280)
T ss_pred HHHHHH-HHHHHHHCCCCEEEECC
T ss_conf 999999-99999829987899788
No 278
>PRK06182 short chain dehydrogenase; Validated
Probab=95.85 E-value=0.18 Score=30.32 Aligned_cols=81 Identities=14% Similarity=0.224 Sum_probs=58.4
Q ss_pred CCCCEEEEEEC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCH
Q ss_conf 99880569815-71116889999978985999739989999999712211278403289899986057788999976990
Q gi|254780716|r 1 MKQADIGIIGL-GSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDG 79 (475)
Q Consensus 1 M~k~~IGiIGL-G~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g 79 (475)
|++..+=+-|- +=+|..+|+.|+++|+.|.+.+|+.++.+++.+.+ + ..+-+-|.+.
T Consensus 1 mk~Kv~lITGassGIG~a~a~~la~~G~~V~~~~r~~~~l~~l~~~~------~----------------~~~~~Dvt~~ 58 (273)
T PRK06182 1 MKKKVALVTGASSGIGKATARKLIAEGFTVYGAARRVDKMEDLASLG------I----------------HPLALDVTDE 58 (273)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCC------C----------------EEEEEECCCH
T ss_conf 94698999063209999999999987998999979899999999679------9----------------7999858999
Q ss_pred HHHHHHHHHHHHCCCCCCEEEECC
Q ss_conf 699999999972078998999679
Q gi|254780716|r 80 DPVDQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 80 ~~v~~vi~~l~~~l~~g~iiID~s 103 (475)
+.++++++.+.....+=|++|...
T Consensus 59 ~~v~~~~~~i~~~~g~iDiLVNNA 82 (273)
T PRK06182 59 ASMKAAVATILAEEGRIDVLVNNA 82 (273)
T ss_pred HHHHHHHHHHHHHHCCCCEEEECC
T ss_conf 999999999999839988775058
No 279
>PRK06194 hypothetical protein; Provisional
Probab=95.84 E-value=0.082 Score=32.92 Aligned_cols=82 Identities=15% Similarity=0.258 Sum_probs=56.9
Q ss_pred EEEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 05698--1571116889999978985999739989999999712211278403289899986057788999976990699
Q gi|254780716|r 5 DIGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 5 ~IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
++.+| |-+=+|..+|+.|++.|.+|.+.||+.++.++..++.......+. .+-+-|.+.+.+
T Consensus 7 KvavITGassGIG~a~A~~la~~Ga~Vvl~d~~~~~l~~~~~~l~~~g~~v~----------------~~~~DVsd~~~v 70 (301)
T PRK06194 7 KVAVITGAASGFGREFARIGARLGMKLVLADVQQDALDRAVAELRAQGAEVL----------------GVRTDVSDAAQV 70 (301)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEE----------------EEECCCCCHHHH
T ss_conf 9899927377999999999998799899997988999999999984598499----------------996568999999
Q ss_pred HHHHHHHHHCCCCCCEEEEC
Q ss_conf 99999997207899899967
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDG 102 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~ 102 (475)
+++++.+......=|++|..
T Consensus 71 ~~l~~~~~~~fG~iDiLVNN 90 (301)
T PRK06194 71 EALADAALERFGAVHLLFNN 90 (301)
T ss_pred HHHHHHHHHHHCCEEEEEEC
T ss_conf 99999999983993799955
No 280
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.83 E-value=0.12 Score=31.75 Aligned_cols=136 Identities=16% Similarity=0.193 Sum_probs=77.6
Q ss_pred CCCEEEEEECCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHCCCCCCC--CEECCCHHHHHHHCCCCCEEEEECCC
Q ss_conf 98805698157111688999997898-5999739989999999712211278--40328989998605778899997699
Q gi|254780716|r 2 KQADIGIIGLGSMGSNLSLNILDKGF-RLAVYNKDFELTDVFIKKISGLSQK--VIVTKNLEQMVEAVCKPRKILMMVTD 78 (475)
Q Consensus 2 ~k~~IGiIGLG~MG~~mA~nL~~~G~-~V~vydr~~~~~~~l~~~~~~~~~~--~~~~~s~~e~v~~l~~pr~Iil~vp~ 78 (475)
++++|-+||+|-.|+..|..|++.|. ++...|.+.=....+..+....... -.-+...++.+..+. |.+-+...+.
T Consensus 10 ~~s~V~v~G~GGvGs~~a~~LarsGVG~l~lvD~D~v~~SNLnRQ~~a~~~~iG~~K~~~~~~rl~~iN-P~~~v~~~~~ 88 (231)
T cd00755 10 RNAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDIN-PECEVDAVEE 88 (231)
T ss_pred HCCCEEEECCCHHHHHHHHHHHHCCCCEEEEEECCEECCCCHHHHHCCCHHHCCCCCHHHHHHHHHHHC-CCCEEEEEHH
T ss_conf 549789988863689999999980997599971999045444433016563369972899999999879-9988998625
Q ss_pred HHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCC-EEEEEC
Q ss_conf 06999999999720789989996798657899999999984799430675467600035684-378845
Q gi|254780716|r 79 GDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGVKGARSGA-SLMVGG 146 (475)
Q Consensus 79 g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~~gA~~G~-slMvGG 146 (475)
....+-+.+++. ..-|+|||+.-+ +..-..+.+.|.++++-++.++=.||. .-| -+.++-
T Consensus 89 -~~~~~n~~~ll~--~~~D~VvDaiD~-~~~K~~l~~~c~~~~iplIss~Gag~k----~DPt~i~v~D 149 (231)
T cd00755 89 -FLTPDNSEDLLG--GDPDFVVDAIDS-IRAKVALIAYCRKRKIPVISSMGAGGK----LDPTRIRVAD 149 (231)
T ss_pred -HCCHHHHHHHHC--CCCCEEEECCCC-HHHHHHHHHHHHHCCCEEEEECCCCCC----CCCCEEEEEE
T ss_conf -159989999845--477778534424-877999999999829908998673467----5775389863
No 281
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=95.81 E-value=0.14 Score=31.30 Aligned_cols=125 Identities=17% Similarity=0.231 Sum_probs=77.5
Q ss_pred CCEEEEEECCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHCC--CCCCCCEECCCHHHHHHHCCCCCEEEEECCCH
Q ss_conf 8805698157111688999997898-59997399899999997122--11278403289899986057788999976990
Q gi|254780716|r 3 QADIGIIGLGSMGSNLSLNILDKGF-RLAVYNKDFELTDVFIKKIS--GLSQKVIVTKNLEQMVEAVCKPRKILMMVTDG 79 (475)
Q Consensus 3 k~~IGiIGLG~MG~~mA~nL~~~G~-~V~vydr~~~~~~~l~~~~~--~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g 79 (475)
+++|-+||+|-.|.+.+..|+..|. ++.+.|.+.-....+..+-- ...-+..-+.+.++.+..+. |.+-+...+.-
T Consensus 28 ~s~VlvvG~GGLG~~~~~yLa~aGvG~i~i~D~D~ve~sNL~RQ~l~~~~~iG~~K~~~a~~~l~~~n-p~i~i~~~~~~ 106 (355)
T PRK05597 28 DAKVSVIGAGGLGSPALLYLAGAGVGHITIIDDDVVDLSNLHRQVIHTTAGVGTPKAESAREAMLALN-PDVKVTVSVRR 106 (355)
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHC-CCCCEEEEHHH
T ss_conf 29689987776689999999984997599972999261213377565412179797999999999878-99742753321
Q ss_pred HHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCC
Q ss_conf 699999999972078998999679865789999999998479943067546760
Q gi|254780716|r 80 DPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGV 133 (475)
Q Consensus 80 ~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~ 133 (475)
-.. +.....++.-|+||||+. +|..-.-+...|...+.-++-+.+.|-+
T Consensus 107 -l~~---~na~~li~~~DvVvD~tD-n~~tR~lind~c~~~~~PlV~ga~~~~~ 155 (355)
T PRK05597 107 -LDW---SNALSELADADVILDGSD-NFDTRHVASWAAARLGIPHVWASILGFD 155 (355)
T ss_pred -CCH---HHHHHHHHCCCEEEECCC-CHHHHHHHHHHHHHHCCCEEEEECCCCE
T ss_conf -577---789977528878987678-8889999999999869987996524467
No 282
>TIGR01921 DAP-DH diaminopimelate dehydrogenase; InterPro: IPR010190 This entry represents the diaminopimelate dehydrogenase enzyme which provides an alternate (shortcut) route of lysine biosynthesis in Corynebacterium, Bacterioides, Porphyromonas and other species. The enzyme from Corynebacterium glutamicum has been crystallized and characterised ..
Probab=95.80 E-value=0.19 Score=30.19 Aligned_cols=183 Identities=19% Similarity=0.229 Sum_probs=116.5
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHC-CCEE-EEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCC
Q ss_conf 9988056981571116889999978-9859-9973998999999971221127840328989998605778899997699
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDK-GFRL-AVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTD 78 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~-G~~V-~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~ 78 (475)
|+|-..||||-||+|+..-.-|..+ .+++ .||.|--..+.++..+ .+...+.+-.+-++.-++.|||-|+
T Consensus 1 M~kiRaaIVGYGNlG~~V~~ai~~~PDmElvgv~~Rrd~~t~~va~~--------~~vy~V~~~~K~~~dvdv~iLC~gs 72 (326)
T TIGR01921 1 MSKIRAAIVGYGNLGKSVEEAIQQAPDMELVGVFRRRDAETLDVAEE--------LAVYAVVEDEKELEDVDVLILCTGS 72 (326)
T ss_pred CCEEEEEEECCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHC--------CCHHHHHHHHHCCCCEEEEEECCCC
T ss_conf 97057888622320079999984089804899887078875761122--------5202222223202882599973886
Q ss_pred HHHHHHHHHHHHHCCCCCCEEEECCCCCHH--HHHHHH-HHHHHCCCCEECCCCCCCCCCCCCCC-EEE-EECCHHHHHH
Q ss_conf 069999999997207899899967986578--999999-99984799430675467600035684-378-8454899988
Q gi|254780716|r 79 GDPVDQLIDKLKPLLSPEDILLDGGNSHFC--DTQIRS-LQLSEKGIYFIGIGVSGGVKGARSGA-SLM-VGGNEKAYNR 153 (475)
Q Consensus 79 g~~v~~vi~~l~~~l~~g~iiID~sts~~~--~t~~~~-~~l~~kgi~fid~pVSGG~~gA~~G~-slM-vGG~~~~~~~ 153 (475)
.. ++..-.|++-.+-.-||.=-.|-+ +-++.- +.+++. |. |+. +|=|+-.|-.
T Consensus 73 at----d~pe~~p~fA~~~nTvDsfD~H~~Ip~~r~~~DaaA~~~------------------g~VSvis~GWDPG~fSi 130 (326)
T TIGR01921 73 AT----DLPEQKPYFAAFINTVDSFDIHTDIPDLRRTLDAAAKEA------------------GAVSVISAGWDPGLFSI 130 (326)
T ss_pred CC----CCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHC------------------CCEEEEEECCCCCCHHH
T ss_conf 45----554345100122101236502242078999999999861------------------98789983478872679
Q ss_pred HHHHHHHHHCCCCCCCEEEEECCC-CHHH--HHHHHHHHHHHHH-HHH-HHHHHHHHHHH--CCCCHHHHH
Q ss_conf 899999875015678618985698-7467--8988776787888-999-89999999964--289978999
Q gi|254780716|r 154 VENILLSISAKYQNSPCCALLGPD-GSGH--FVKMIHNGIEYAN-MQL-IADIYGILRDS--LNKNPLEIS 217 (475)
Q Consensus 154 ~~piL~~iaak~~~~~cv~y~G~~-GsGh--~vKMVhNgIey~~-mq~-iaE~~~~l~~~--~~~~~~~i~ 217 (475)
.+=++++++++.. -+++.||+ ..|| .||-| .|++-|. |.+ +-++.+=.+++ .+++-.+++
T Consensus 131 ~Rv~geA~lp~g~---tyTfwGpGlS~GHsdAvrrI-dGVk~Av~yTlP~~DA~E~~R~GE~~~LTg~~~H 197 (326)
T TIGR01921 131 NRVLGEAILPKGI---TYTFWGPGLSQGHSDAVRRI-DGVKAAVQYTLPIKDALEKVRRGEAEELTGKEIH 197 (326)
T ss_pred HHHHHHHHHCCCC---EEEEECCCCCCCHHHHHHHH-HHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCEE
T ss_conf 9999997501686---13323788664358988765-6678886417885788898626888888756500
No 283
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=95.79 E-value=0.19 Score=30.27 Aligned_cols=75 Identities=21% Similarity=0.337 Sum_probs=57.3
Q ss_pred ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHH
Q ss_conf 15711168899999789859997399899999997122112784032898999860577889999769906999999999
Q gi|254780716|r 10 GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQLIDKL 89 (475)
Q Consensus 10 GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi~~l 89 (475)
|-+-+|..+|+.|++.|.+|.+.+|+.++.++..++.... ...+..-|.+.+.+++.++.+
T Consensus 17 ~s~GIG~aiA~~la~~Ga~Vvi~~r~~~~l~~~~~~l~~~-------------------~~~~~~Dvtd~~~v~~~v~~~ 77 (251)
T PRK07523 17 SSQGIGYALAKGLAQAGAEVILNGRDAAKLAAAAESLKGS-------------------AHTLAFDVTDHDAVRAAIDAF 77 (251)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCC-------------------CEEEEEECCCHHHHHHHHHHH
T ss_conf 3669999999999987999999969989999999981887-------------------279999579999999999999
Q ss_pred HHCCCCCCEEEECC
Q ss_conf 72078998999679
Q gi|254780716|r 90 KPLLSPEDILLDGG 103 (475)
Q Consensus 90 ~~~l~~g~iiID~s 103 (475)
.....+=|++|...
T Consensus 78 ~~~~G~iDiLVNNA 91 (251)
T PRK07523 78 EAEIGPIDILVNNA 91 (251)
T ss_pred HHHCCCCCEEEECC
T ss_conf 99759986999898
No 284
>PRK07814 short chain dehydrogenase; Provisional
Probab=95.79 E-value=0.13 Score=31.38 Aligned_cols=82 Identities=10% Similarity=0.221 Sum_probs=59.5
Q ss_pred EEEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 05698--1571116889999978985999739989999999712211278403289899986057788999976990699
Q gi|254780716|r 5 DIGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 5 ~IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
++.+| |-+-+|..+|+.|++.|.+|.+.+|+.++.+++.++-......+ ..+-.-|.+.+.+
T Consensus 11 KvalITGgs~GIG~aia~~la~~Ga~V~i~~~~~~~l~~~~~~i~~~g~~~----------------~~~~~Dv~~~~~v 74 (263)
T PRK07814 11 QVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRA----------------HVVAADLAHPEAT 74 (263)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEE----------------EEEECCCCCHHHH
T ss_conf 989995896689999999999879989999698999999999998529928----------------9998158999999
Q ss_pred HHHHHHHHHCCCCCCEEEEC
Q ss_conf 99999997207899899967
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDG 102 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~ 102 (475)
++.++.....+..=|++|..
T Consensus 75 ~~~v~~~~~~~G~iDiLVnN 94 (263)
T PRK07814 75 AGLAGQAVEAFGRLDIVVNN 94 (263)
T ss_pred HHHHHHHHHHHCCCCEEEEC
T ss_conf 99999999982998899989
No 285
>PRK09186 flagellin modification protein A; Provisional
Probab=95.78 E-value=0.14 Score=31.10 Aligned_cols=84 Identities=18% Similarity=0.251 Sum_probs=59.6
Q ss_pred CCEEEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEE--EECCC
Q ss_conf 8805698--1571116889999978985999739989999999712211278403289899986057788999--97699
Q gi|254780716|r 3 QADIGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKIL--MMVTD 78 (475)
Q Consensus 3 k~~IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Ii--l~vp~ 78 (475)
|-++.+| |-+-+|..+|+.|+++|.+|.+.||+.++.++..++.... ...++.+ .-|.+
T Consensus 3 ~gK~~lVTGgs~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~l~~~-----------------~~~~v~~~~~Dvt~ 65 (255)
T PRK09186 3 EGKTILITGAGGLIGSALVKAILEAGGIVIAADINKEALNKLLESLGTI-----------------EKTKLTLVELDITD 65 (255)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHH-----------------CCCEEEEEECCCCC
T ss_conf 9598999795868999999999987999999969889999999999870-----------------59807999846899
Q ss_pred HHHHHHHHHHHHHCCCCCCEEEECC
Q ss_conf 0699999999972078998999679
Q gi|254780716|r 79 GDPVDQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 79 g~~v~~vi~~l~~~l~~g~iiID~s 103 (475)
.+.++++++.+......=|++|.+.
T Consensus 66 ~~~v~~~~~~~~~~~g~id~lVnnA 90 (255)
T PRK09186 66 QESLEEFLSKSQERYGKIDGAVNCA 90 (255)
T ss_pred HHHHHHHHHHHHHHHCCCCEEEECC
T ss_conf 9999999999999819977899757
No 286
>CHL00194 ycf39 Ycf39; Provisional
Probab=95.76 E-value=0.082 Score=32.92 Aligned_cols=109 Identities=15% Similarity=0.154 Sum_probs=64.3
Q ss_pred EEEEE-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHH
Q ss_conf 56981-57111688999997898599973998999999971221127840328989998605778899997699069999
Q gi|254780716|r 6 IGIIG-LGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQ 84 (475)
Q Consensus 6 IGiIG-LG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~ 84 (475)
|-++| .|..|+.+++.|+++|++|.+.-|++++...+...+.... .--..+++.+..+++..+.|+.+.+..
T Consensus 3 ILV~GATG~lGr~vVr~Ll~~G~~Vr~lvRnp~ka~~l~~~Gve~v--~gDl~dpesl~~Al~GvdaVi~~~~~~----- 75 (319)
T CHL00194 3 LLVIGATGTLGRQIVRRALDEGYQVKCLVRNLRKAAFLKEWGAELV--YGDLSLPETIPPALEGITAIIDASTSR----- 75 (319)
T ss_pred EEEECCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCEEE--EECCCCHHHHHHHHCCCCEEEEECCCC-----
T ss_conf 9998998589999999999688908999578676323421596799--942788778999965996799945667-----
Q ss_pred HHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCC-EECCCCCCC
Q ss_conf 999997207899899967986578999999999847994-306754676
Q gi|254780716|r 85 LIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIY-FIGIGVSGG 132 (475)
Q Consensus 85 vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~-fid~pVSGG 132 (475)
+.+. ...-..+++.+....+.+++.|+. |+=.-+-|.
T Consensus 76 ----------~~~~-~~~~~vd~~g~~~li~AAk~aGVkr~V~lS~lga 113 (319)
T CHL00194 76 ----------PSDL-NNAYQIDLEGKLALIEAAKAAKVKRFIFFSILNA 113 (319)
T ss_pred ----------CCCC-CHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf ----------7886-2088988988999999999849988999613566
No 287
>PRK07326 short chain dehydrogenase; Provisional
Probab=95.76 E-value=0.11 Score=31.91 Aligned_cols=80 Identities=19% Similarity=0.285 Sum_probs=58.1
Q ss_pred EEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 5698--15711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 6 IGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 6 IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
+.+| |-+-+|..+|+.|++.|++|.+.+|+.++.+++.++.... ++ ..+-.-|.+.+.++
T Consensus 7 valITGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~--~~----------------~~~~~Dv~d~~~v~ 68 (235)
T PRK07326 7 AALVTGGSKGIGFAVAEALAAAGYRVAICARDESELEAAAQELGKR--NV----------------LGLACDVRDEADVR 68 (235)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCC--CE----------------EEEEEECCCHHHHH
T ss_conf 9999382679999999999987999999989889999999984239--86----------------99996389999999
Q ss_pred HHHHHHHHCCCCCCEEEECC
Q ss_conf 99999972078998999679
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~s 103 (475)
..++.+.....+=|++|...
T Consensus 69 ~~v~~~~~~~G~iDiLVNNA 88 (235)
T PRK07326 69 QAVDAHVEAFGGLDILVNNA 88 (235)
T ss_pred HHHHHHHHHCCCCEEEEECC
T ss_conf 99999999829966999888
No 288
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.76 E-value=0.15 Score=31.06 Aligned_cols=80 Identities=14% Similarity=0.148 Sum_probs=54.2
Q ss_pred EEEEE-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHH
Q ss_conf 56981-57111688999997898599973998999999971221127840328989998605778899997699069999
Q gi|254780716|r 6 IGIIG-LGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQ 84 (475)
Q Consensus 6 IGiIG-LG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~ 84 (475)
+=+.| -+-+|..+|+.|++.|.+|.+.+|++++.+++.++..... ++ ..+..-+.+.+.+++
T Consensus 8 ~lVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g-~~----------------~~~~~Dvs~~~~v~~ 70 (238)
T PRK05786 8 VLIVGVSPGLGYAVAYFALREGASVYAFARSEEKLKEIKKTLAKYG-NV----------------IYVVGDVSKLEGARE 70 (238)
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCC-CE----------------EEEECCCCCHHHHHH
T ss_conf 9992898789999999999879999999698899999999874359-77----------------999757899999999
Q ss_pred HHHHHHHCCCCCCEEEEC
Q ss_conf 999997207899899967
Q gi|254780716|r 85 LIDKLKPLLSPEDILLDG 102 (475)
Q Consensus 85 vi~~l~~~l~~g~iiID~ 102 (475)
.++.+......-|++|..
T Consensus 71 ~~~~~~~~~g~iD~lv~n 88 (238)
T PRK05786 71 AAEKAAKVFGALHGLVVT 88 (238)
T ss_pred HHHHHHHHHCCCCEEEEE
T ss_conf 999999983998879980
No 289
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.75 E-value=0.09 Score=32.61 Aligned_cols=121 Identities=15% Similarity=0.174 Sum_probs=64.8
Q ss_pred EEEEEECCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHCCCC-CCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 05698157111688999997898-5999739989999999712211-278403289899986057788999976990699
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGF-RLAVYNKDFELTDVFIKKISGL-SQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~-~V~vydr~~~~~~~l~~~~~~~-~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
+|.+||+|-.|.+.|..|++.|. ++...|.+.=....+..+.-.. .-+-.-+...++....+. |.+-+...+. ...
T Consensus 1 kV~IvG~GGLG~~~a~~La~aGvg~i~lvD~D~Ve~SNL~RQ~~~~~diG~~Ka~~a~~~l~~iN-p~i~i~~~~~-~l~ 78 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREIN-PFVKIEAINI-KID 78 (174)
T ss_pred CEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHCCHHHHHHCCCHHHHHHHHHHHHHC-CCCEEEEEEC-CCC
T ss_conf 98998767889999999998189739999899466644301324777479749999999999879-7988999914-449
Q ss_pred HHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHH-HHCCCCEECCCCCC
Q ss_conf 99999997207899899967986578999999999-84799430675467
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQL-SEKGIYFIGIGVSG 131 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l-~~kgi~fid~pVSG 131 (475)
.+-++++ ++.-|+|+|++-. +.....+.+.+ ..++.-++.+...|
T Consensus 79 ~~n~~~l---~~~~D~ViD~~Dn-~~tr~~l~~~~~~~~~~plv~as~~~ 124 (174)
T cd01487 79 ENNLEGL---FGDCDIVVEAFDN-AETKAMLAESLLGNKNKPVVCASGMA 124 (174)
T ss_pred HHHHHHH---HHCCCEEEECCCC-HHHHHHHHHHHHHHCCCCEEEEEEEC
T ss_conf 9999999---8379999999999-89999999999998799599997451
No 290
>PRK07478 short chain dehydrogenase; Provisional
Probab=95.75 E-value=0.12 Score=31.77 Aligned_cols=82 Identities=15% Similarity=0.171 Sum_probs=58.2
Q ss_pred EEEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 05698--1571116889999978985999739989999999712211278403289899986057788999976990699
Q gi|254780716|r 5 DIGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 5 ~IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
++.+| |-+-+|..+|+.|++.|.+|.+.+|+.++.+++.++.......+. .+-.-|.+.+.+
T Consensus 7 KvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~l~~~~~ei~~~g~~~~----------------~~~~Dvt~~~~v 70 (254)
T PRK07478 7 KVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAV----------------ALAGDVRDEAYA 70 (254)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEE----------------EEECCCCCHHHH
T ss_conf 8799958876899999999998799999997988999999999996499089----------------997689999999
Q ss_pred HHHHHHHHHCCCCCCEEEEC
Q ss_conf 99999997207899899967
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDG 102 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~ 102 (475)
+++++.......+=|++|..
T Consensus 71 ~~~v~~~~~~~G~iDiLVNN 90 (254)
T PRK07478 71 KALVALAVERFGGLDIAFNN 90 (254)
T ss_pred HHHHHHHHHHHCCCCEEEEC
T ss_conf 99999999984999899988
No 291
>PRK07035 short chain dehydrogenase; Provisional
Probab=95.73 E-value=0.14 Score=31.20 Aligned_cols=81 Identities=14% Similarity=0.283 Sum_probs=56.7
Q ss_pred EEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 5698--15711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 6 IGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 6 IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
+.+| |-+-+|..+|+.|++.|.+|.+.+|+.++.+++.++-......+ ..+-.-|.+.+.++
T Consensus 10 valITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~i~~~g~~~----------------~~~~~Dv~~~~~v~ 73 (252)
T PRK07035 10 IALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKA----------------EALACHIGEMEQID 73 (252)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCE----------------EEEECCCCCHHHHH
T ss_conf 89995887499999999999879989999798899999999999649957----------------99982489999999
Q ss_pred HHHHHHHHCCCCCCEEEEC
Q ss_conf 9999997207899899967
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDG 102 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~ 102 (475)
+.++.+.....+=|++|..
T Consensus 74 ~~~~~~~~~~G~iDilVnn 92 (252)
T PRK07035 74 ALFAQIRERHGRLDILVNN 92 (252)
T ss_pred HHHHHHHHHHCCCCEEEEC
T ss_conf 9999999982997789876
No 292
>PRK06138 short chain dehydrogenase; Provisional
Probab=95.72 E-value=0.15 Score=30.91 Aligned_cols=82 Identities=17% Similarity=0.244 Sum_probs=59.4
Q ss_pred EEEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 05698--1571116889999978985999739989999999712211278403289899986057788999976990699
Q gi|254780716|r 5 DIGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 5 ~IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
++.+| |-+-+|..+|+.|++.|.+|.+.||+.++.++..++... ..++ ..+-.-|.+.+.+
T Consensus 6 KvalVTGas~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~-~~~~----------------~~~~~Dvs~~~~v 68 (252)
T PRK06138 6 RVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAA-GGRA----------------FARQGDVGSAEAV 68 (252)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHC-CCCE----------------EEEEECCCCHHHH
T ss_conf 8899947467999999999998799899996887899999999837-9919----------------9999428999999
Q ss_pred HHHHHHHHHCCCCCCEEEECC
Q ss_conf 999999972078998999679
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~s 103 (475)
++.++.+.....+=|++|...
T Consensus 69 ~~~~~~~~~~~G~iDiLVNNA 89 (252)
T PRK06138 69 EALVDFVAARWGRLDVLVNNA 89 (252)
T ss_pred HHHHHHHHHHCCCCCEEEECC
T ss_conf 999999999829998999898
No 293
>PRK12409 D-amino acid dehydrogenase small subunit; Provisional
Probab=95.71 E-value=0.017 Score=37.97 Aligned_cols=34 Identities=24% Similarity=0.626 Sum_probs=31.6
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCH
Q ss_conf 998805698157111688999997898599973998
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDF 36 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~ 36 (475)
|+. |.|||-|..|...|.+|++.|++|.|+|+..
T Consensus 1 m~~--V~VIGaGivGlstA~~La~~G~~VtviDr~~ 34 (410)
T PRK12409 1 MSH--IAVIGAGITGVTTAYALAQRGYQVTVFDRHR 34 (410)
T ss_pred CCC--EEEECCHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 995--9998983999999999997899189996989
No 294
>PRK12829 short chain dehydrogenase; Provisional
Probab=95.70 E-value=0.16 Score=30.81 Aligned_cols=81 Identities=17% Similarity=0.265 Sum_probs=60.1
Q ss_pred EEEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 05698--1571116889999978985999739989999999712211278403289899986057788999976990699
Q gi|254780716|r 5 DIGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 5 ~IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
++.+| |-+-+|..+|+.|++.|.+|.+.||++++.+++.++... .... .+-.-|.+.+.+
T Consensus 12 KvalVTGgs~GIG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~--~~~~----------------~~~~Dvt~~~~v 73 (264)
T PRK12829 12 LRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPG--AKVT----------------ATVADVADPAQV 73 (264)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCC--CCEE----------------EEEEECCCHHHH
T ss_conf 9799947376899999999998799899997998999999997479--9759----------------999628999999
Q ss_pred HHHHHHHHHCCCCCCEEEECC
Q ss_conf 999999972078998999679
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~s 103 (475)
++.++.+......=|++|...
T Consensus 74 ~~~v~~~~~~~G~iDiLVNNA 94 (264)
T PRK12829 74 ERVFDTAVERFGGLDVLVNNA 94 (264)
T ss_pred HHHHHHHHHHCCCCCEEEECC
T ss_conf 999999999739998999899
No 295
>PRK12828 short chain dehydrogenase; Provisional
Probab=95.69 E-value=0.19 Score=30.21 Aligned_cols=81 Identities=15% Similarity=0.206 Sum_probs=59.6
Q ss_pred EEEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 05698--1571116889999978985999739989999999712211278403289899986057788999976990699
Q gi|254780716|r 5 DIGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 5 ~IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
++.+| |-+-+|..+|+.|++.|.+|.+.+|+.++.++.+++... ...+.+-.-|.+.+.+
T Consensus 8 KvalITGas~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~------------------~~~~~~~~Dvt~~~~~ 69 (239)
T PRK12828 8 KVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPA------------------DALRIGGIDLVDPQAA 69 (239)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHC------------------CCCEEEEECCCCHHHH
T ss_conf 9899947254899999999998799899997987789999987517------------------8856999607999999
Q ss_pred HHHHHHHHHCCCCCCEEEECC
Q ss_conf 999999972078998999679
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~s 103 (475)
++.++.+.....+=|++|...
T Consensus 70 ~~~v~~~~~~~G~iDilVnNA 90 (239)
T PRK12828 70 RRAVDEVNRQFGRLDALVNIA 90 (239)
T ss_pred HHHHHHHHHHCCCCCEEEECC
T ss_conf 999999999839997999897
No 296
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=95.68 E-value=0.1 Score=32.29 Aligned_cols=126 Identities=14% Similarity=0.158 Sum_probs=77.8
Q ss_pred CCCEEEEEECCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHCC--CCCCCCEECCCHHHHHHHCCCCCEEEEECCC
Q ss_conf 98805698157111688999997898-59997399899999997122--1127840328989998605778899997699
Q gi|254780716|r 2 KQADIGIIGLGSMGSNLSLNILDKGF-RLAVYNKDFELTDVFIKKIS--GLSQKVIVTKNLEQMVEAVCKPRKILMMVTD 78 (475)
Q Consensus 2 ~k~~IGiIGLG~MG~~mA~nL~~~G~-~V~vydr~~~~~~~l~~~~~--~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~ 78 (475)
+++.|-+||+|-.|.+.+..|+..|. ++.+.|.+.=....+..+-- ...-+..-+.+.++.+..++ |.+-+..++.
T Consensus 40 ~~a~VlvvG~GGLG~p~~~yLaaaGvG~i~ivD~D~Ve~sNL~RQil~~~~diG~~K~~~A~~~l~~lN-p~i~i~~~~~ 118 (370)
T PRK05600 40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQ-PDIRVNALRE 118 (370)
T ss_pred HCCCEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHCCCHHHCCCCHHHHHHHHHHHHC-CCCCEEEHHH
T ss_conf 619789988875789999999982897489873898260210555426976669757999999999878-9971573566
Q ss_pred HHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCC
Q ss_conf 0699999999972078998999679865789999999998479943067546760
Q gi|254780716|r 79 GDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGV 133 (475)
Q Consensus 79 g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~ 133 (475)
- -.. +.+...++.-|+||||+- ++..-.-....|...++-++-+.+.|-+
T Consensus 119 ~-l~~---~n~~~li~~~DvVvD~tD-Nf~tRylindaC~~~~~PlV~ga~~~~e 168 (370)
T PRK05600 119 R-LTA---ENAVELLNGVDLVLDGSD-SFATKFLVADAAEITGTPLVWGTVLRFH 168 (370)
T ss_pred H-CCH---HHHHHHHHCCCEEEECCC-CHHHHHHHHHHHHHHCCCEEEEEECCCE
T ss_conf 4-699---999987636878997788-8799999999999849976984532628
No 297
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=95.68 E-value=0.16 Score=30.77 Aligned_cols=75 Identities=19% Similarity=0.295 Sum_probs=56.1
Q ss_pred ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHH
Q ss_conf 15711168899999789859997399899999997122112784032898999860577889999769906999999999
Q gi|254780716|r 10 GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQLIDKL 89 (475)
Q Consensus 10 GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi~~l 89 (475)
|-+-+|..+|+.|++.|..|.+.+|+.++.+++.++.. .++ ..+-.-|.+.+.++..++.+
T Consensus 14 ~s~GIG~aia~~~a~~Ga~V~i~~~~~~~~~~~~~~~~---~~~----------------~~~~~Dv~~~~~v~~~~~~~ 74 (245)
T PRK12936 14 ASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELG---ERV----------------KIFPANLSDRDEVKALGQKA 74 (245)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHC---CCE----------------EEEECCCCCHHHHHHHHHHH
T ss_conf 47689999999999869999998299999999999838---966----------------99991379999999999999
Q ss_pred HHCCCCCCEEEECC
Q ss_conf 72078998999679
Q gi|254780716|r 90 KPLLSPEDILLDGG 103 (475)
Q Consensus 90 ~~~l~~g~iiID~s 103 (475)
......=|++|...
T Consensus 75 ~~~~g~iDiLINnA 88 (245)
T PRK12936 75 EADLEGVDILVNNA 88 (245)
T ss_pred HHHCCCCCEEEECC
T ss_conf 99759996999899
No 298
>PRK05855 short chain dehydrogenase; Validated
Probab=95.65 E-value=0.12 Score=31.57 Aligned_cols=72 Identities=15% Similarity=0.180 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCC
Q ss_conf 11688999997898599973998999999971221127840328989998605778899997699069999999997207
Q gi|254780716|r 14 MGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQLIDKLKPLL 93 (475)
Q Consensus 14 MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi~~l~~~l 93 (475)
+|.++|+.|++.|.+|.+.|++.+..++..++-...+.... .+.+-|.+.+++++..+.+....
T Consensus 327 IGrA~A~~fA~~GA~Vvl~Dr~~~~l~eta~ei~~~G~~a~----------------~~~~DVtd~~av~al~~~v~~~~ 390 (582)
T PRK05855 327 IGRATALAFAREGAEVVASDIDEAAAERTAALIRAAGAVAH----------------AYRVDVSDADAMEALAEWVGAEH 390 (582)
T ss_pred HHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCEEE----------------EEECCCCCHHHHHHHHHHHHHHC
T ss_conf 99999999997799999960799999999999995198489----------------99755899999999999999976
Q ss_pred CCCCEEEE
Q ss_conf 89989996
Q gi|254780716|r 94 SPEDILLD 101 (475)
Q Consensus 94 ~~g~iiID 101 (475)
..=||+|.
T Consensus 391 G~iDILVN 398 (582)
T PRK05855 391 GVPDIVVN 398 (582)
T ss_pred CCCCEEEE
T ss_conf 99999998
No 299
>PRK07776 consensus
Probab=95.65 E-value=0.22 Score=29.78 Aligned_cols=79 Identities=13% Similarity=0.212 Sum_probs=55.4
Q ss_pred EEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 5698--15711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 6 IGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 6 IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
+.+| |-+-+|..+|++|++.|.+|.+.+|++++.++..++... ... -.+..-+.+.+.++
T Consensus 10 v~lITG~~~GIG~aiA~~la~~Ga~V~i~~~~~~~l~~~~~~l~~--~~~----------------~~~~~Dv~~~~~~~ 71 (252)
T PRK07776 10 TAIVTGASRGIGLAIAQALAAAGANVVITARKQEALDEAAAQLGA--ERA----------------LGVAGHAVDEEHAR 71 (252)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCC--CCE----------------EEEEEECCCHHHHH
T ss_conf 899947787999999999998799899997988999999998479--957----------------99997428999999
Q ss_pred HHHHHHHHCCCCCCEEEEC
Q ss_conf 9999997207899899967
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDG 102 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~ 102 (475)
+.++.+.....+=|++|.-
T Consensus 72 ~~~~~~~~~~g~iDilVnN 90 (252)
T PRK07776 72 EAVDLTLERFGSVDILVNN 90 (252)
T ss_pred HHHHHHHHHHCCCCEEEEC
T ss_conf 9999999984998699987
No 300
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=95.63 E-value=0.21 Score=29.98 Aligned_cols=100 Identities=15% Similarity=0.223 Sum_probs=71.0
Q ss_pred EEEEEE-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCC-CCCC--CEECCCHHHHHHHCCCCCEEEEECCCHH
Q ss_conf 056981-57111688999997898599973998999999971221-1278--4032898999860577889999769906
Q gi|254780716|r 5 DIGIIG-LGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISG-LSQK--VIVTKNLEQMVEAVCKPRKILMMVTDGD 80 (475)
Q Consensus 5 ~IGiIG-LG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~-~~~~--~~~~~s~~e~v~~l~~pr~Iil~vp~g~ 80 (475)
++-++| .|..|...|+-|++.|-+|..-.|+.++.+++.++-.. .... .....+.++....+...++||..-++|-
T Consensus 30 ~~~V~G~tG~vG~~~A~~lA~~Ga~v~lv~R~~ek~~~~a~~i~~r~g~~~~~~~~~~~~~~~~~l~~adiV~~a~aAGv 109 (194)
T cd01078 30 TAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAGAAGV 109 (194)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEECCHHHH
T ss_conf 89998588578999999999839979999587888999999999970987311357887789977466989996427778
Q ss_pred HHHHHHHHHHHCCCCCCEEEECCCCCH
Q ss_conf 999999999720789989996798657
Q gi|254780716|r 81 PVDQLIDKLKPLLSPEDILLDGGNSHF 107 (475)
Q Consensus 81 ~v~~vi~~l~~~l~~g~iiID~sts~~ 107 (475)
+ ++.+.....+++.+++|..-..|
T Consensus 110 --~-~~~~~~~~~k~l~Vv~DVNAvPP 133 (194)
T cd01078 110 --E-LLEKLAWAPKPLAVAADVNAVPP 133 (194)
T ss_pred --H-HHHHHHHCCCCCEEEEECCCCCC
T ss_conf --8-87888850888659986589998
No 301
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=95.62 E-value=0.16 Score=30.79 Aligned_cols=79 Identities=23% Similarity=0.318 Sum_probs=55.3
Q ss_pred EEEEECC-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHH
Q ss_conf 5698157-111688999997898599973998999999971221127840328989998605778899997699069999
Q gi|254780716|r 6 IGIIGLG-SMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQ 84 (475)
Q Consensus 6 IGiIGLG-~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~ 84 (475)
|=+-|-+ -+|..+|+.|++.|.+|.+.+|+.++.++..++..... .+ ..+-.-|.+.+.++.
T Consensus 3 VlITGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g-~~----------------~~~~~Dv~~~~~v~~ 65 (259)
T PRK08340 3 VLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKELG-EV----------------YAIKADLSDKDDLKN 65 (259)
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCC-CE----------------EEEEEECCCHHHHHH
T ss_conf 9997587789999999999879999999799899999999987418-87----------------999963699899999
Q ss_pred HHHHHHHCCCCCCEEEE
Q ss_conf 99999720789989996
Q gi|254780716|r 85 LIDKLKPLLSPEDILLD 101 (475)
Q Consensus 85 vi~~l~~~l~~g~iiID 101 (475)
++++....+..=|++|.
T Consensus 66 ~v~~~~~~~G~iD~LVn 82 (259)
T PRK08340 66 LVKEAWELLGGIDALVW 82 (259)
T ss_pred HHHHHHHHHCCCCEEEE
T ss_conf 99999998599888998
No 302
>PRK06123 short chain dehydrogenase; Provisional
Probab=95.62 E-value=0.22 Score=29.69 Aligned_cols=86 Identities=17% Similarity=0.331 Sum_probs=58.9
Q ss_pred CCCCEEEEE--ECCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECC
Q ss_conf 998805698--1571116889999978985999-7399899999997122112784032898999860577889999769
Q gi|254780716|r 1 MKQADIGII--GLGSMGSNLSLNILDKGFRLAV-YNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVT 77 (475)
Q Consensus 1 M~k~~IGiI--GLG~MG~~mA~nL~~~G~~V~v-ydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp 77 (475)
|++ +|.+| |-+-+|..+|+.|++.|++|.+ |+++.+..+++.+........+. .+-.-|.
T Consensus 1 m~n-KvalITGas~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~----------------~~~~Dv~ 63 (249)
T PRK06123 1 MMR-KVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEAL----------------AVAADVA 63 (249)
T ss_pred CCC-CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCEEE----------------EEECCCC
T ss_conf 999-88999686879999999999987998999808987899999999996499099----------------9984799
Q ss_pred CHHHHHHHHHHHHHCCCCCCEEEECC
Q ss_conf 90699999999972078998999679
Q gi|254780716|r 78 DGDPVDQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 78 ~g~~v~~vi~~l~~~l~~g~iiID~s 103 (475)
+.+.++.+++.+.....+=|++|...
T Consensus 64 ~~~~v~~~~~~~~~~~G~iDiLVnNA 89 (249)
T PRK06123 64 DEADVLRLFEAVDRELGRLDALVNNA 89 (249)
T ss_pred CHHHHHHHHHHHHHHHCCCCEEEECC
T ss_conf 99999999999999829987899888
No 303
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.61 E-value=0.14 Score=31.14 Aligned_cols=78 Identities=18% Similarity=0.390 Sum_probs=54.8
Q ss_pred ECCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHH
Q ss_conf 1571116889999978985999-739989999999712211278403289899986057788999976990699999999
Q gi|254780716|r 10 GLGSMGSNLSLNILDKGFRLAV-YNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQLIDK 88 (475)
Q Consensus 10 GLG~MG~~mA~nL~~~G~~V~v-ydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi~~ 88 (475)
|-+-+|..+|+.|+++|++|.+ ++++.++.+++.++......++ ..+-.-+.+.+.+++.++.
T Consensus 13 gs~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~----------------~~~~~Dl~~~~~~~~~~~~ 76 (247)
T PRK05565 13 ASGGIGRAIAELLAKEGAKVVIAYDKNEEAANELLEEIKEVGGDA----------------IAVKADVSSEDDVENLVEQ 76 (247)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCE----------------EEEECCCCCHHHHHHHHHH
T ss_conf 845899999999998799899981799899999999999639908----------------9998358999999999999
Q ss_pred HHHCCCCCCEEEECC
Q ss_conf 972078998999679
Q gi|254780716|r 89 LKPLLSPEDILLDGG 103 (475)
Q Consensus 89 l~~~l~~g~iiID~s 103 (475)
+.....+=|++|...
T Consensus 77 ~~~~~g~iD~lVnnA 91 (247)
T PRK05565 77 IVEKFGKIDILVNNA 91 (247)
T ss_pred HHHHCCCCCEEEECC
T ss_conf 999809984999899
No 304
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=95.61 E-value=0.2 Score=29.98 Aligned_cols=80 Identities=15% Similarity=0.264 Sum_probs=59.9
Q ss_pred EEEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 05698--1571116889999978985999739989999999712211278403289899986057788999976990699
Q gi|254780716|r 5 DIGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 5 ~IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
++.+| |-+-+|..+|+.|++.|.+|.+.|++.++.++..++... +. ..+-.-|.+.+.+
T Consensus 6 KvalVTGas~GIG~aia~~la~~Ga~V~i~d~~~~~~~~~~~~~g~---~~----------------~~~~~Dvt~~~~v 66 (256)
T PRK07067 6 KVALLTGAASGIGEAVAQRYLREGARVVLADIKPARAALAALEIGP---AA----------------VAVSLDVTRQDSI 66 (256)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCC---CE----------------EEEEEECCCHHHH
T ss_conf 8899937677899999999998799999997988999999998199---75----------------9999848999999
Q ss_pred HHHHHHHHHCCCCCCEEEECC
Q ss_conf 999999972078998999679
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~s 103 (475)
+++++.+.....+=|++|...
T Consensus 67 ~~~v~~~~~~~G~iDiLVNNA 87 (256)
T PRK07067 67 DRIVAAAVERFGGIDILVNNA 87 (256)
T ss_pred HHHHHHHHHHCCCCCEEEECC
T ss_conf 999999999819998999899
No 305
>TIGR02371 ala_DH_arch alanine dehydrogenase; InterPro: IPR012742 This enzyme, a homologue of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other archaea..
Probab=95.60 E-value=0.062 Score=33.80 Aligned_cols=123 Identities=18% Similarity=0.203 Sum_probs=75.0
Q ss_pred CEEEEEECCHHHHH--HHHHHHHCCCEEEEEECCHHHHHHHHHHCC-CCCCCCEECCCHHHHHHHCCCCCEEEEECCCHH
Q ss_conf 80569815711168--899999789859997399899999997122-112784032898999860577889999769906
Q gi|254780716|r 4 ADIGIIGLGSMGSN--LSLNILDKGFRLAVYNKDFELTDVFIKKIS-GLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGD 80 (475)
Q Consensus 4 ~~IGiIGLG~MG~~--mA~nL~~~G~~V~vydr~~~~~~~l~~~~~-~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~ 80 (475)
+-|||||.|+--.- +|.+=.-.==+|.+|+|+++..++|+.+.. ...-.+..+.++.|-+..|| ++.+.-|+=+
T Consensus 130 sv~G~iGaG~QA~tQL~Al~rVfd~eeV~~y~rt~~~~~kF~~~~skd~~~~~~a~~~p~E~v~~cD---ilVTtTPsRk 206 (327)
T TIGR02371 130 SVLGLIGAGRQAYTQLEALSRVFDLEEVKVYSRTKEAAEKFVKRASKDYEVPVRAATDPAEKVEDCD---ILVTTTPSRK 206 (327)
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCCEEECCCCHHHHCCCC---EEEEECCCCC
T ss_conf 3355763685799999998762554506998617688999998752024651242126747770786---7998568989
Q ss_pred HH-HHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEE-----------CCCCCCCCCC
Q ss_conf 99-9999999720789989996798657899999999984799430-----------6754676000
Q gi|254780716|r 81 PV-DQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFI-----------GIGVSGGVKG 135 (475)
Q Consensus 81 ~v-~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fi-----------d~pVSGG~~g 135 (475)
+| .+ ...++|.=|-=.|---+-..+-=-+.|++..|-+- -.|||-|.-+
T Consensus 207 PvVkA------~WV~eGTHInAiGADapGKqELDpeiLk~aki~vDdleQA~HsGEiNVp~skg~i~ 267 (327)
T TIGR02371 207 PVVKA------DWVEEGTHINAIGADAPGKQELDPEILKKAKIVVDDLEQAKHSGEINVPISKGVIR 267 (327)
T ss_pred CEEEE------ECCCCCCCEEEECCCCCCCCCCCHHHHHCCCEEEECHHHCCCCCEEEECCCCCEEE
T ss_conf 60754------22598882551057888831003687632706885133200176471021377233
No 306
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.55 E-value=0.17 Score=30.55 Aligned_cols=83 Identities=22% Similarity=0.360 Sum_probs=59.7
Q ss_pred EEEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 05698--1571116889999978985999739989999999712211278403289899986057788999976990699
Q gi|254780716|r 5 DIGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 5 ~IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
++.+| |-.-+|..+|+.|++.|.+|.+.||+.++.++..++....+..+. .+-.-|.+.+.+
T Consensus 8 KvalVTGgs~GIG~a~A~~la~~Ga~V~i~~~~~~~~~~~~~~i~~~g~~~~----------------~~~~Dvt~~~~v 71 (262)
T PRK13394 8 KTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAI----------------GVAMDVTNEDAV 71 (262)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEE----------------EEECCCCCHHHH
T ss_conf 9899958577899999999998799999997988999999999996299399----------------998158999999
Q ss_pred HHHHHHHHHCCCCCCEEEECC
Q ss_conf 999999972078998999679
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~s 103 (475)
++.++.....+..=|++|...
T Consensus 72 ~~~v~~~~~~~G~iDiLVnnA 92 (262)
T PRK13394 72 NAGIDKVAERFGSVDILVSNA 92 (262)
T ss_pred HHHHHHHHHHHCCCCEEEECC
T ss_conf 999999999819999999899
No 307
>PRK06198 short chain dehydrogenase; Provisional
Probab=95.54 E-value=0.17 Score=30.50 Aligned_cols=82 Identities=11% Similarity=0.188 Sum_probs=57.4
Q ss_pred EEEEE-CCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 56981-571116889999978985-9997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 6 IGIIG-LGSMGSNLSLNILDKGFR-LAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 6 IGiIG-LG~MG~~mA~nL~~~G~~-V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
+=+-| -+-+|..+|+.|++.|.+ |.+++|+.++.+++.++......++ ..+-.-|.+.+.++
T Consensus 9 alVTGas~GIG~aiA~~la~~Ga~vv~~~~~~~~~~~~~~~~~~~~g~~~----------------~~~~~Dv~~~~~v~ 72 (268)
T PRK06198 9 ALVTGGTQGLGAAIARLFAERGAAGLVICGRSAEKGEAKAAELEALGAKA----------------VFVQADLAKVEDCR 72 (268)
T ss_pred EEEECCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCE----------------EEEECCCCCHHHHH
T ss_conf 99958577899999999998799389996298889999999999549967----------------99982689999999
Q ss_pred HHHHHHHHCCCCCCEEEECC
Q ss_conf 99999972078998999679
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~s 103 (475)
.+++.......+=|++|...
T Consensus 73 ~~~~~~~~~fG~iDiLVNnA 92 (268)
T PRK06198 73 AVVAAADEAFGRLDALVNAA 92 (268)
T ss_pred HHHHHHHHHHCCCCEEEECC
T ss_conf 99999999839998999899
No 308
>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain; InterPro: IPR014089 This group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which they have been characterised , , . In most species this protein is bifunctional, existing as fused alpha-beta domains. In Pyrococcus and related species, however, the domains exist as separate polypeptides. This entry represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. One of these (along with its beta-domain partner) was characterised as ACS-II showing specificity for phenylacetyl-CoA . This entry excludes non-ACS-I paralogs. .
Probab=95.53 E-value=0.085 Score=32.78 Aligned_cols=252 Identities=17% Similarity=0.232 Sum_probs=165.9
Q ss_pred EEEEEEC----CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCC-CCCC-CEECCCHHHH-HHHCCCCCEEEEECC
Q ss_conf 0569815----7111688999997898599973998999999971221-1278-4032898999-860577889999769
Q gi|254780716|r 5 DIGIIGL----GSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISG-LSQK-VIVTKNLEQM-VEAVCKPRKILMMVT 77 (475)
Q Consensus 5 ~IGiIGL----G~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~-~~~~-~~~~~s~~e~-v~~l~~pr~Iil~vp 77 (475)
.|.+||- |..|..+-+||.+-||+=.+|=.|+.. . .-.+ ++++.++.+. -+.+| ..+++||
T Consensus 9 SvAVIGAS~~~gKVGy~i~~NL~~~Gy~G~~YPVNpk~---------~i~i~Gr~k~Y~~~~~~dP~~VD---LAVivvP 76 (457)
T TIGR02717 9 SVAVIGASRDEGKVGYAIMKNLIEGGYKGKIYPVNPKA---------GIEILGRVKAYPSVLEIDPDEVD---LAVIVVP 76 (457)
T ss_pred CEEEECCCCCCCCCCHHHHEEEECCCCEEEEEEECCCC---------CEEEEECCCCCCCHHHCCCCCCC---EEEEECC
T ss_conf 15897124889851002200000378303687622788---------71463011457871114899734---7999728
Q ss_pred CHHHHHHHHHHHHHCCCCCCEEEECC-----CCCHHHHHHHHHHHHHCCCCEECCCCC--------------------CC
Q ss_conf 90699999999972078998999679-----865789999999998479943067546--------------------76
Q gi|254780716|r 78 DGDPVDQLIDKLKPLLSPEDILLDGG-----NSHFCDTQIRSLQLSEKGIYFIGIGVS--------------------GG 132 (475)
Q Consensus 78 ~g~~v~~vi~~l~~~l~~g~iiID~s-----ts~~~~t~~~~~~l~~kgi~fid~pVS--------------------GG 132 (475)
+ +.|-+|+++-...==+|-+||-.| +...+--+++.+.|++-|++.|+.=+. |+
T Consensus 77 a-~~vp~v~eECG~KGVkg~vvI~AGF~E~G~eG~~LE~~l~~~a~kYg~Rl~GPNclG~~nt~~~lNAtFA~~~p~~G~ 155 (457)
T TIGR02717 77 A-KLVPQVVEECGEKGVKGAVVITAGFKEVGEEGAELEQKLVEIARKYGMRLLGPNCLGIINTEIKLNATFAPTMPKKGG 155 (457)
T ss_pred H-HHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCEEEEECCCHHHHHCCCCCCCCCCC
T ss_conf 5-679999999861795189997148645316789999999999976788177673622581440211001357889887
Q ss_pred -----CCCC------------CCCCEEEEE-CCHHHHHHHHHHHHHHHCCCC--------------------------CC
Q ss_conf -----0003------------568437884-548999888999998750156--------------------------78
Q gi|254780716|r 133 -----VKGA------------RSGASLMVG-GNEKAYNRVENILLSISAKYQ--------------------------NS 168 (475)
Q Consensus 133 -----~~gA------------~~G~slMvG-G~~~~~~~~~piL~~iaak~~--------------------------~~ 168 (475)
..|| .-|.|-||| |++...+.. .+|+-++..-+ ..
T Consensus 156 Iaf~SQSGAl~~a~Ldwa~~~~vGfS~~VS~GNkAD~~e~-Dlley~~~D~~T~~I~~Y~Eg~~DG~~Fl~~A~~~s~~K 234 (457)
T TIGR02717 156 IAFISQSGALLTALLDWAEKNGVGFSYFVSLGNKADIDES-DLLEYLADDPDTKVILLYLEGIKDGRKFLKTAKEISKKK 234 (457)
T ss_pred EEEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCEECCHH-HHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCC
T ss_conf 7789712589999999998727813477826741111657-788898539894089997178704168999988863059
Q ss_pred CE-EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 61-89856987467898877678788899989999999-96428997899999986068844307999999999740567
Q gi|254780716|r 169 PC-CALLGPDGSGHFVKMIHNGIEYANMQLIADIYGIL-RDSLNKNPLEISHLFSKWDTGKLSSYLIKITAEILSSSDTI 246 (475)
Q Consensus 169 ~c-v~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l-~~~~~~~~~~i~~vf~~w~~~~~~syLl~i~~~il~~k~~~ 246 (475)
|= +.=-|.+-+|.-+=+=|=|=.=|. -++|..+ |+++-.--+-+.+.|+ .++.|..-...
T Consensus 235 Piv~lKsG~s~~GakAA~SHTGaLAGs----~~~y~aaf~q~G~iRa~~~~ELfd--------------~A~~L~~~~~~ 296 (457)
T TIGR02717 235 PIVVLKSGTSEAGAKAASSHTGALAGS----DEAYDAAFKQAGVIRADSIEELFD--------------LARLLSNQPLP 296 (457)
T ss_pred CEEEEECCCCHHHHHHHHHCCCHHHHH----HHHHHHHHCCCCEEEEECHHHHHH--------------HHHHHHCCCCC
T ss_conf 889993688834567652102313366----899998743014388701778899--------------99998358989
Q ss_pred -CCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf -9995200102333658716778988775178885146777888775
Q gi|254780716|r 247 -TGMPIIDVICDKASQKGTGIRSIIEGHKLSSSMTITETAIFARNLS 292 (475)
Q Consensus 247 -~g~~lid~i~d~~~~kgTg~Wt~~~a~~lgvp~p~i~~av~aR~~S 292 (475)
.| ++|.=.-+.=|.|--|+=...+.|.+..-+.++...|..-
T Consensus 297 ~~g----~~~~IiTN~GG~Gvia~D~~~~~Gl~L~~~~~~t~~~L~~ 339 (457)
T TIGR02717 297 PKG----NRVAIITNAGGPGVIATDACEEVGLELAELSEKTKEKLRN 339 (457)
T ss_pred CCC----CEEEEEECCCCHHHHHHHHHHHCCCEEECCCHHHHHHHHH
T ss_conf 988----7699997896167787656777497455585899999997
No 309
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.52 E-value=0.18 Score=30.44 Aligned_cols=81 Identities=17% Similarity=0.311 Sum_probs=58.3
Q ss_pred EEEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 05698--1571116889999978985999739989999999712211278403289899986057788999976990699
Q gi|254780716|r 5 DIGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 5 ~IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
++.+| |-+-+|..+|+.|+++|++|.+.+|+.++.+++.++-.. .++ ..+..-|.+.+.+
T Consensus 7 K~alITGgs~GIG~aia~~la~~G~~V~i~~r~~~~~~~~~~~~~~--~~~----------------~~~~~Dv~~~~~~ 68 (250)
T PRK07231 7 KVAIVTGAGSGFGEGIARRFAAEGARVVVTDRNQEAAERVAAEIRG--GRA----------------IAVAADVSDEADV 68 (250)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCC--CCE----------------EEEEEECCCHHHH
T ss_conf 8899938886899999999998799999997988999999998449--967----------------9999307999999
Q ss_pred HHHHHHHHHCCCCCCEEEECC
Q ss_conf 999999972078998999679
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~s 103 (475)
++.++.+...+.+=|++|...
T Consensus 69 ~~~~~~~~~~~g~iD~lInnA 89 (250)
T PRK07231 69 RAAVEAALERFGSVDILVNNA 89 (250)
T ss_pred HHHHHHHHHHHCCCCEEEECC
T ss_conf 999999999819971999888
No 310
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=95.50 E-value=0.085 Score=32.78 Aligned_cols=15 Identities=13% Similarity=0.016 Sum_probs=6.3
Q ss_pred EEEECCHHHHHHHHH
Q ss_conf 997399899999997
Q gi|254780716|r 30 AVYNKDFELTDVFIK 44 (475)
Q Consensus 30 ~vydr~~~~~~~l~~ 44 (475)
..++..++..+++++
T Consensus 42 ~~~~v~~~~l~~~~~ 56 (289)
T PRK12548 42 LAFDVPKEKVADAIT 56 (289)
T ss_pred EEEECCHHHHHHHHH
T ss_conf 978778889999999
No 311
>PRK07825 short chain dehydrogenase; Provisional
Probab=95.50 E-value=0.2 Score=30.07 Aligned_cols=73 Identities=19% Similarity=0.245 Sum_probs=52.7
Q ss_pred CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHH
Q ss_conf 57111688999997898599973998999999971221127840328989998605778899997699069999999997
Q gi|254780716|r 11 LGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQLIDKLK 90 (475)
Q Consensus 11 LG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi~~l~ 90 (475)
-+-+|..+|+.|++.|.+|.+.||+.++.++..++... +. .+-+-|.+.+.++++++.+.
T Consensus 14 ssGIG~a~A~~la~~Ga~V~i~~r~~~~l~~~~~~~~~----~~----------------~~~~DVtd~~~v~~~~~~~~ 73 (273)
T PRK07825 14 ARGIGLATARALAALGAKVAIGDLDEALAKESAAELGL----VV----------------GGPLDVTDPASFAAFLDAVE 73 (273)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCC----CE----------------EEECCCCCHHHHHHHHHHHH
T ss_conf 33999999999998799899997999999999986078----55----------------99914799999999999999
Q ss_pred HCCCCCCEEEECC
Q ss_conf 2078998999679
Q gi|254780716|r 91 PLLSPEDILLDGG 103 (475)
Q Consensus 91 ~~l~~g~iiID~s 103 (475)
....+=|++|...
T Consensus 74 ~~~G~iDiLVNNA 86 (273)
T PRK07825 74 ADLGPIDVLVNNA 86 (273)
T ss_pred HHHCCCCEEEECC
T ss_conf 9709977899878
No 312
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=95.45 E-value=0.16 Score=30.82 Aligned_cols=83 Identities=12% Similarity=0.245 Sum_probs=57.2
Q ss_pred EEEEE--ECCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHH
Q ss_conf 05698--1571116889999978985999-73998999999971221127840328989998605778899997699069
Q gi|254780716|r 5 DIGII--GLGSMGSNLSLNILDKGFRLAV-YNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDP 81 (475)
Q Consensus 5 ~IGiI--GLG~MG~~mA~nL~~~G~~V~v-ydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~ 81 (475)
++.+| |-+-+|..+|+.|+++|++|.+ |+++.+..+++.++.......+. .+-.-|.+.+.
T Consensus 7 KvalVTGa~~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~----------------~~~~Dvs~~~~ 70 (252)
T PRK06947 7 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRAC----------------VVAGDVANEAD 70 (252)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCEE----------------EEECCCCCHHH
T ss_conf 08999388358999999999987998999808987899999999996499289----------------99847999999
Q ss_pred HHHHHHHHHHCCCCCCEEEECC
Q ss_conf 9999999972078998999679
Q gi|254780716|r 82 VDQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 82 v~~vi~~l~~~l~~g~iiID~s 103 (475)
++.+++........=|++|...
T Consensus 71 v~~~~~~~~~~~G~iD~lVnNA 92 (252)
T PRK06947 71 VIAMFDAVQAAFGRLDALVNNA 92 (252)
T ss_pred HHHHHHHHHHHHCCCCEEEECC
T ss_conf 9999999999849988999876
No 313
>PRK08324 short chain dehydrogenase; Validated
Probab=95.43 E-value=0.2 Score=30.10 Aligned_cols=51 Identities=8% Similarity=0.163 Sum_probs=27.2
Q ss_pred CCHHHHHHHHHHHHHCCCCCCCCCHHHCCC-CCCCCCHHHHHHHHHHHHCCCCCHH
Q ss_conf 430799999999974056799952001023-3365871677898877517888514
Q gi|254780716|r 228 LSSYLIKITAEILSSSDTITGMPIIDVICD-KASQKGTGIRSIIEGHKLSSSMTIT 282 (475)
Q Consensus 228 ~~syLl~i~~~il~~k~~~~g~~lid~i~d-~~~~kgTg~Wt~~~a~~lgvp~p~i 282 (475)
..-|.||-.+ |++... ..+|--+|.= .-+..|-|+=++..=.+.|..+-..
T Consensus 400 ~EYW~LEqaK--L~~~~~--~~~L~GKVALVTGga~GIG~A~A~~fa~eGA~Vvl~ 451 (676)
T PRK08324 400 IEYWSLEQAK--LQKMPK--PKPLAGKVALVTGAAGGIGLATAKRLAAEGACVVLA 451 (676)
T ss_pred CCCCHHHHHH--HHCCCC--CCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEE
T ss_conf 5655177888--626899--988899879994798816299999999879989999
No 314
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=95.43 E-value=0.18 Score=30.45 Aligned_cols=83 Identities=16% Similarity=0.395 Sum_probs=58.8
Q ss_pred EEEEE--ECCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHH
Q ss_conf 05698--1571116889999978985999-73998999999971221127840328989998605778899997699069
Q gi|254780716|r 5 DIGII--GLGSMGSNLSLNILDKGFRLAV-YNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDP 81 (475)
Q Consensus 5 ~IGiI--GLG~MG~~mA~nL~~~G~~V~v-ydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~ 81 (475)
++.+| |-+-+|.++|+.|++.|.+|.+ |+++.+..+++.++.......+. .+-.-|.+.+.
T Consensus 7 KvalVTG~s~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~----------------~~~~Dvs~~~~ 70 (247)
T PRK12935 7 KVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVY----------------AVQADVSKVED 70 (247)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEE----------------EEECCCCCHHH
T ss_conf 98999172768999999999987998999769998999999999984399589----------------99857999999
Q ss_pred HHHHHHHHHHCCCCCCEEEECC
Q ss_conf 9999999972078998999679
Q gi|254780716|r 82 VDQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 82 v~~vi~~l~~~l~~g~iiID~s 103 (475)
+++.++.......+=|++|...
T Consensus 71 ~~~~v~~~~~~~G~iDiLVNNA 92 (247)
T PRK12935 71 ANRLVEEAVNHFGKVDILVNNA 92 (247)
T ss_pred HHHHHHHHHHHCCCCCEEEECC
T ss_conf 9999999999839998999899
No 315
>pfam03447 NAD_binding_3 Homoserine dehydrogenase, NAD binding domain. This domain adopts a Rossmann NAD binding fold. The C-terminal domain of homoserine dehydrogenase contributes a single helix to this structural domain, which is not included in the Pfam model.
Probab=95.41 E-value=0.26 Score=29.20 Aligned_cols=105 Identities=18% Similarity=0.266 Sum_probs=67.5
Q ss_pred ECCHHHHHHHHHHHHCC----CE-EEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHH
Q ss_conf 15711168899999789----85-99973998999999971221127840328989998605778899997699069999
Q gi|254780716|r 10 GLGSMGSNLSLNILDKG----FR-LAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQ 84 (475)
Q Consensus 10 GLG~MG~~mA~nL~~~G----~~-V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~ 84 (475)
|+|+.|+..++-|.++. ++ +.+.+|++.+.+... .......+.++.++++.. .+++|+-|-+. +++.
T Consensus 1 G~G~VG~~v~~~l~~~~~~~~~~l~~v~~r~~~~~~~~~-----~~~~~~~~~d~~~ll~~~-~iDvVVE~~g~-~~~~- 72 (116)
T pfam03447 1 GCGAIGSGLLELLLRQQEEIPLELVAVADRDLLSKARAA-----LLGDEPVTLDLDDLVADP-RPDVVVECASS-EAVA- 72 (116)
T ss_pred CCCCHHHHHHHHHHHCCCCCCEEEEEEEECCHHHCCCCC-----CCCCCEEECCHHHHHCCC-CCCEEEECCCC-HHHH-
T ss_conf 987028999999994920356799999847834323212-----466671577999996188-99899988994-8999-
Q ss_pred HHHHHHHCCCCCCEEEECCCCCHHH---HHHHHHHHHHCCCCE
Q ss_conf 9999972078998999679865789---999999998479943
Q gi|254780716|r 85 LIDKLKPLLSPEDILLDGGNSHFCD---TQIRSLQLSEKGIYF 124 (475)
Q Consensus 85 vi~~l~~~l~~g~iiID~sts~~~~---t~~~~~~l~~kgi~f 124 (475)
+-..+.|+.|.-+|-..-.-..+ -.++.+.++++|..+
T Consensus 73 --~~~~~aL~~GkhVVTaNK~~lA~~~~~~eL~~~A~~~g~~~ 113 (116)
T pfam03447 73 --EYVLKALKAGKHVVTASKGALADLALRERLREAAEASGVRV 113 (116)
T ss_pred --HHHHHHHHCCCEEEEECHHHHCCHHHHHHHHHHHHHCCCEE
T ss_conf --99999998799899907889678579999999999839969
No 316
>COG0460 ThrA Homoserine dehydrogenase [Amino acid transport and metabolism]
Probab=95.41 E-value=0.15 Score=30.89 Aligned_cols=124 Identities=19% Similarity=0.294 Sum_probs=64.9
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHC--------CCEE---EEEECCHHHHHHHHHHCCCCCCCCEECCCH-----HHHHH
Q ss_conf 9988056981571116889999978--------9859---997399899999997122112784032898-----99986
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDK--------GFRL---AVYNKDFELTDVFIKKISGLSQKVIVTKNL-----EQMVE 64 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~--------G~~V---~vydr~~~~~~~l~~~~~~~~~~~~~~~s~-----~e~v~ 64 (475)
|++-+||++|+|..|+++++-|.++ |.++ .+-||+..+...+- .... .....++ .+++.
T Consensus 1 ~~~v~v~l~G~G~VG~~~~~il~~~~~~l~~~~g~~i~v~~v~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~ 75 (333)
T COG0460 1 MKTVKVGLLGLGTVGSGVLEILAEKQEELRKRAGIEIRVVAVADRDGSLVRDLD--LLNA---EVWTTDGALSLGDEVLL 75 (333)
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCC--CCCH---HHHEECCCCCCCHHHHC
T ss_conf 954899998337142999999998268887632872699999961530113566--5332---34300553244276650
Q ss_pred HCCCCCEEEEECCC-HHHHHHHHHHHHHCCCCCCEEEECCCCCHHHH--HHHHHHHHHCCCC-EECCCCCCC
Q ss_conf 05778899997699-06999999999720789989996798657899--9999999847994-306754676
Q gi|254780716|r 65 AVCKPRKILMMVTD-GDPVDQLIDKLKPLLSPEDILLDGGNSHFCDT--QIRSLQLSEKGIY-FIGIGVSGG 132 (475)
Q Consensus 65 ~l~~pr~Iil~vp~-g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t--~~~~~~l~~kgi~-fid~pVSGG 132 (475)
. ...++++-+++. -...+. .+-+...|+.|.-||- .|=.+-.. .++.+.+++.|.. +.++.|.||
T Consensus 76 ~-~~~dvvve~~~~d~~~~~~-~~~~~~al~~GkhVVT-aNK~~lA~~~~el~~~A~~~g~~l~yEAtV~gG 144 (333)
T COG0460 76 D-EDIDVVVELVGGDVEPAEP-ADLYLKALENGKHVVT-ANKALLALHYHELREAAEKNGVKLLYEATVGGG 144 (333)
T ss_pred C-CCCCEEEECCCCCCCCHHH-HHHHHHHHHCCCEEEC-CCCHHHHHHHHHHHHHHHHHCCEEEEEEEECCC
T ss_conf 4-5688798557666874123-8999999975996997-896476766999999999739858998550257
No 317
>PRK06500 short chain dehydrogenase; Provisional
Probab=95.40 E-value=0.26 Score=29.18 Aligned_cols=75 Identities=13% Similarity=0.099 Sum_probs=54.4
Q ss_pred ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHH
Q ss_conf 15711168899999789859997399899999997122112784032898999860577889999769906999999999
Q gi|254780716|r 10 GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQLIDKL 89 (475)
Q Consensus 10 GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi~~l 89 (475)
|-+-+|..+|+.|++.|.+|.+.+|++++.++..++... +. ..+-.-+.+.+.++++++.+
T Consensus 14 as~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~l~~---~~----------------~~~~~Dv~~~~~~~~~~~~~ 74 (249)
T PRK06500 14 GTSGIGLETARQFAAEGARVAITGRDAATLEAARAELGE---DA----------------LVIRNDAGSVAAQRALAQAL 74 (249)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCC---CE----------------EEEEEECCCHHHHHHHHHHH
T ss_conf 687899999999998799999996998999999998589---75----------------99995179999999999999
Q ss_pred HHCCCCCCEEEECC
Q ss_conf 72078998999679
Q gi|254780716|r 90 KPLLSPEDILLDGG 103 (475)
Q Consensus 90 ~~~l~~g~iiID~s 103 (475)
.....+=|++|...
T Consensus 75 ~~~~g~iDiLvnnA 88 (249)
T PRK06500 75 AEAGGRLDAVFINA 88 (249)
T ss_pred HHHCCCCCEEEECC
T ss_conf 99769998999899
No 318
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=95.39 E-value=0.21 Score=29.98 Aligned_cols=79 Identities=15% Similarity=0.192 Sum_probs=54.0
Q ss_pred EEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 5698--15711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 6 IGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 6 IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
+.+| |-+-+|..+|+.|++.|.+|.+.||+.++.+++.++... ++. .+-.-+.+.+.++
T Consensus 7 valITGgs~GIG~aia~~~a~~Ga~V~i~~r~~~~l~~~~~~~g~---~~~----------------~~~~Dv~~~~~~~ 67 (262)
T TIGR03325 7 VVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGD---AVV----------------GVEGDVRSLDDHK 67 (262)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCC---CEE----------------EEECCCCCHHHHH
T ss_conf 899906787899999999998799999998998999999986799---679----------------9984579999999
Q ss_pred HHHHHHHHCCCCCCEEEECC
Q ss_conf 99999972078998999679
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~s 103 (475)
++++.......+=|++|...
T Consensus 68 ~~v~~~~~~~G~iDiLVnNA 87 (262)
T TIGR03325 68 EAVARCVAAFGKIDCLIPNA 87 (262)
T ss_pred HHHHHHHHHHCCCCEEEECC
T ss_conf 99999999849988899726
No 319
>PRK06940 short chain dehydrogenase; Provisional
Probab=95.38 E-value=0.27 Score=29.13 Aligned_cols=85 Identities=16% Similarity=0.244 Sum_probs=55.1
Q ss_pred CCCCEEEEE-ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCH
Q ss_conf 998805698-1571116889999978985999739989999999712211278403289899986057788999976990
Q gi|254780716|r 1 MKQADIGII-GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDG 79 (475)
Q Consensus 1 M~k~~IGiI-GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g 79 (475)
|++ +|-+| |-|-+|.++|+.|+ .|..|.+.||+.++.+++.++.......+. .+-.-|.+.
T Consensus 3 L~~-kV~v~tGa~GIG~aiA~~la-~Ga~vvi~~~~~~~l~~~~~~l~~~g~~~~----------------~~~~Dvs~~ 64 (277)
T PRK06940 3 MSK-EVVVVIGAGGMGQAIARRVG-SGKTVLLADYNEENLQAVARTLREAGFDVI----------------TQQVDVSSR 64 (277)
T ss_pred CCC-CEEEECCCCHHHHHHHHHHH-HCCEEEEEECCHHHHHHHHHHHHHCCCEEE----------------EEECCCCCH
T ss_conf 899-29999781699999999998-199899998988999999999872288299----------------998257998
Q ss_pred HHHHHHHHHHHHCCCCCCEEEECCC
Q ss_conf 6999999999720789989996798
Q gi|254780716|r 80 DPVDQLIDKLKPLLSPEDILLDGGN 104 (475)
Q Consensus 80 ~~v~~vi~~l~~~l~~g~iiID~st 104 (475)
+.++.+++.. ..+.+=|++|...-
T Consensus 65 ~~v~~l~~~~-~~~G~idiLVnnAG 88 (277)
T PRK06940 65 ESVKALAQTA-ATLGAVTGLVHTAG 88 (277)
T ss_pred HHHHHHHHHH-HHHCCCCEEEECCC
T ss_conf 9999999999-98699879998886
No 320
>COG0057 GapA Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism]
Probab=95.38 E-value=0.049 Score=34.55 Aligned_cols=166 Identities=16% Similarity=0.172 Sum_probs=87.1
Q ss_pred EEEEEECCHHHHHHHHHHHHCC--CEEEEEEC-C-HHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHH
Q ss_conf 0569815711168899999789--85999739-9-899999997122112784032898999860577889999769906
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKG--FRLAVYNK-D-FELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGD 80 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G--~~V~vydr-~-~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~ 80 (475)
+||+=|.|.+|+..++.+..++ .+|.+-|- + ++....+.+. ......+.+.-+.++-...++...+=
T Consensus 3 kV~INGfGrIGR~v~ra~~~~~~dieVVaInd~t~~~~~A~Llk~-Ds~hg~f~~~v~~~~~~~~v~g~~I~-------- 73 (335)
T COG0057 3 KVAINGFGRIGRLVARAALERDGDIEVVAINDLTDPDYLAHLLKY-DSVHGRFDGEVEVKDDALVVNGKGIK-------- 73 (335)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHH-CCCCCCCCCCCCCCCCEEEECCCEEE--------
T ss_conf 899945757889999999717897599999368997899899864-25578877732247874898995268--------
Q ss_pred HHHHHHH-HHHHCCCCC-CEEEECCCCCHHHHHHHHHHHHHCCCC--EECCCCCCCCCCCCCCCEEEEECCHHHHHHHHH
Q ss_conf 9999999-997207899-899967986578999999999847994--306754676000356843788454899988899
Q gi|254780716|r 81 PVDQLID-KLKPLLSPE-DILLDGGNSHFCDTQIRSLQLSEKGIY--FIGIGVSGGVKGARSGASLMVGGNEKAYNRVEN 156 (475)
Q Consensus 81 ~v~~vi~-~l~~~l~~g-~iiID~sts~~~~t~~~~~~l~~kgi~--fid~pVSGG~~gA~~G~slMvGG~~~~~~~~~p 156 (475)
|....+ ..+|.-+-| ||+|||+-.+- ......+.+++.|+. ++.+|-.+- -+.+..|-..+.|+.-+.
T Consensus 74 -v~~~~~p~~l~w~d~gvdiVve~Tg~f~-~~e~~~~hl~agGaKkV~isap~~~~------~~~vv~gvn~~~~~~~~~ 145 (335)
T COG0057 74 -VLAERDPANLPWADLGVDIVVECTGKFT-GREKAEKHLKAGGAKKVLISAPGKDD------VATVVYGVNHNYYDAGHT 145 (335)
T ss_pred -EEECCCHHHCCCCCCCCCEEEECCCCCC-CHHHHHHHHHHCCCCEEEECCCCCCC------CCEEEEECCCCCCCCCCC
T ss_conf -8732896879812128639998998766-63347999874599789985789888------617998525133578884
Q ss_pred HHHHHHCCCCCCCEEEEECCCCHHHHHHHHHH--HHHHHHHHHH
Q ss_conf 99987501567861898569874678988776--7878889998
Q gi|254780716|r 157 ILLSISAKYQNSPCCALLGPDGSGHFVKMIHN--GIEYANMQLI 198 (475)
Q Consensus 157 iL~~iaak~~~~~cv~y~G~~GsGh~vKMVhN--gIey~~mq~i 198 (475)
+.... =|-..+-.-.+|.+|. |||.|.|..+
T Consensus 146 iVsna-----------SCTTNcLap~~kvl~d~fGI~~g~mTtV 178 (335)
T COG0057 146 IVSNA-----------SCTTNCLAPVAKVLNDAFGIEKGLMTTV 178 (335)
T ss_pred EEEEC-----------CCHHHHHHHHHHHHHHHCCEEEEEEEEE
T ss_conf 89874-----------5113006787999988609459999999
No 321
>PRK05693 short chain dehydrogenase; Provisional
Probab=95.35 E-value=0.27 Score=29.07 Aligned_cols=76 Identities=17% Similarity=0.275 Sum_probs=57.0
Q ss_pred EEEEE-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHH
Q ss_conf 56981-57111688999997898599973998999999971221127840328989998605778899997699069999
Q gi|254780716|r 6 IGIIG-LGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQ 84 (475)
Q Consensus 6 IGiIG-LG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~ 84 (475)
+=+-| -+-+|..+|+.|+++|++|.+..|+.+..+++.+++ +. .+-+-|.+.+.+++
T Consensus 4 vlITGassGIG~alA~~la~~G~~V~~~~R~~~~l~~l~~~~------~~----------------~~~~Dvtd~~~i~~ 61 (274)
T PRK05693 4 VLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAG------FT----------------AVQLDVNDGAALAR 61 (274)
T ss_pred EEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCC------CC----------------EEEEECCCHHHHHH
T ss_conf 999488858999999999987999999979999999998489------91----------------89984699899999
Q ss_pred HHHHHHHCCCCCCEEEECC
Q ss_conf 9999972078998999679
Q gi|254780716|r 85 LIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 85 vi~~l~~~l~~g~iiID~s 103 (475)
+.+.+......=|++|...
T Consensus 62 ~~~~~~~~~g~iDiLVNNA 80 (274)
T PRK05693 62 LAEELEAEHQGLDVLINNA 80 (274)
T ss_pred HHHHHHHHCCCCCEEEECC
T ss_conf 9999999729976899888
No 322
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.33 E-value=0.28 Score=29.02 Aligned_cols=87 Identities=21% Similarity=0.313 Sum_probs=57.3
Q ss_pred CC-CCEEEEE--ECCHHHHHHHHHHHHCCCEEEEEECC-HHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEEC
Q ss_conf 99-8805698--15711168899999789859997399-89999999712211278403289899986057788999976
Q gi|254780716|r 1 MK-QADIGII--GLGSMGSNLSLNILDKGFRLAVYNKD-FELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMV 76 (475)
Q Consensus 1 M~-k~~IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~-~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~v 76 (475)
|. +.+|.+| |-+-+|..+|+.|++.|++|.+.+++ .+..+++.++.......+. .+-.-|
T Consensus 1 M~~~~KValVTGgs~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~----------------~~~~Dv 64 (259)
T PRK12745 1 MKSTRPVALVTGGRRGIGLGIALALAAGGFDLAINDRPDAEKLAATQQELRALGVEVI----------------FFPADV 64 (259)
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCEE----------------EEECCC
T ss_conf 9999999999686789999999999987998999979866789999999984499489----------------998468
Q ss_pred CCHHHHHHHHHHHHHCCCCCCEEEECC
Q ss_conf 990699999999972078998999679
Q gi|254780716|r 77 TDGDPVDQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 77 p~g~~v~~vi~~l~~~l~~g~iiID~s 103 (475)
.+.+.++..++.+.....+=|++|...
T Consensus 65 ~~~~~~~~~~~~~~~~fg~iDiLVNNA 91 (259)
T PRK12745 65 ADLSAHEATLDAAQDAWGRIDCLVNNA 91 (259)
T ss_pred CCHHHHHHHHHHHHHHHCCCCEEEECC
T ss_conf 999999999999999829988999847
No 323
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=95.33 E-value=0.16 Score=30.80 Aligned_cols=86 Identities=21% Similarity=0.356 Sum_probs=58.2
Q ss_pred CCCCEEEEE--ECCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECC
Q ss_conf 998805698--1571116889999978985999-7399899999997122112784032898999860577889999769
Q gi|254780716|r 1 MKQADIGII--GLGSMGSNLSLNILDKGFRLAV-YNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVT 77 (475)
Q Consensus 1 M~k~~IGiI--GLG~MG~~mA~nL~~~G~~V~v-ydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp 77 (475)
|++ ++.+| |-+-+|..+|++|++.|++|.+ |.++.++.+++.++......++. .+-.-|.
T Consensus 1 L~~-KvalVTGgs~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~g~~~~----------------~~~~Dv~ 63 (246)
T PRK12938 1 MSQ-RIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFI----------------ASEGNVG 63 (246)
T ss_pred CCC-CEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCEE----------------EEECCCC
T ss_conf 950-98999185869999999999987998999479981789999999984599789----------------9967879
Q ss_pred CHHHHHHHHHHHHHCCCCCCEEEECC
Q ss_conf 90699999999972078998999679
Q gi|254780716|r 78 DGDPVDQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 78 ~g~~v~~vi~~l~~~l~~g~iiID~s 103 (475)
+.+.+++.++.+...+.+=|++|..-
T Consensus 64 ~~~~~~~~~~~i~~~~g~idiLVNNA 89 (246)
T PRK12938 64 DWDSTKAAFDKVKAEVGEIDVLVNNA 89 (246)
T ss_pred CHHHHHHHHHHHHHHCCCCCEEEECC
T ss_conf 99999999999999759998999898
No 324
>PRK05134 3-demethylubiquinone-9 3-methyltransferase; Provisional
Probab=95.32 E-value=0.28 Score=29.02 Aligned_cols=95 Identities=15% Similarity=0.096 Sum_probs=60.5
Q ss_pred EEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCE-ECCCHHHHHHHC-CCCCEEEEE--CCCHH
Q ss_conf 05698157111688999997898599973998999999971221127840-328989998605-778899997--69906
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVI-VTKNLEQMVEAV-CKPRKILMM--VTDGD 80 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~-~~~s~~e~v~~l-~~pr~Iil~--vp~g~ 80 (475)
+|==||.| |.-++..|++.|.+|.+-|.+++.++...+.......++. -+.+++++...- ++-++|+.+ +-+=+
T Consensus 51 ~ILDVGCG--gG~lse~LAr~Ga~VtGID~S~~~I~~Ar~ha~~~~l~i~y~~~~~e~l~~~~~~~FDvV~~~EVlEHV~ 128 (233)
T PRK05134 51 RVLDVGCG--GGILSESMARLGATVTGIDASEENIEVARLHALESGLKIDYRQITAEELAAEHPGQFDVVTCMEMLEHVP 128 (233)
T ss_pred EEEEECCC--CCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHCCCCEEEEEEEHHHHHCC
T ss_conf 89997558--9711289996799799987998999999998564434511675147665430578634774421477538
Q ss_pred HHHHHHHHHHHCCCCCCEEEE
Q ss_conf 999999999720789989996
Q gi|254780716|r 81 PVDQLIDKLKPLLSPEDILLD 101 (475)
Q Consensus 81 ~v~~vi~~l~~~l~~g~iiID 101 (475)
..+.++..+...|+||-.++-
T Consensus 129 d~~~~l~~~~rlLKPGG~l~l 149 (233)
T PRK05134 129 DPASFIRACAKLVKPGGLVFF 149 (233)
T ss_pred CHHHHHHHHHHHHCCCCEEEE
T ss_conf 999999999997389914999
No 325
>PRK08267 short chain dehydrogenase; Provisional
Probab=95.32 E-value=0.2 Score=30.11 Aligned_cols=79 Identities=16% Similarity=0.255 Sum_probs=51.4
Q ss_pred EEEEEC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHH
Q ss_conf 569815-7111688999997898599973998999999971221127840328989998605778899997699069999
Q gi|254780716|r 6 IGIIGL-GSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQ 84 (475)
Q Consensus 6 IGiIGL-G~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~ 84 (475)
+=+-|- +=+|.++|+.|+++|++|.+.||++++.+++.++... ..+. ..-+-|.+.+.+++
T Consensus 4 vlITGassGIG~a~A~~~a~~G~~V~~~~r~~~~l~~~~~~l~~--~~~~----------------~~~~Dvtd~~~v~~ 65 (258)
T PRK08267 4 IFITGAASGIGRATARLFAARGWRVGAYDINEDGLAALAAELGA--ERAW----------------TGALDVTDRAAWDA 65 (258)
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCC--CCEE----------------EEEECCCCHHHHHH
T ss_conf 99907226899999999998799999998889999999998369--9679----------------99911799999999
Q ss_pred HHHHHHHCC-CCCCEEEEC
Q ss_conf 999997207-899899967
Q gi|254780716|r 85 LIDKLKPLL-SPEDILLDG 102 (475)
Q Consensus 85 vi~~l~~~l-~~g~iiID~ 102 (475)
.+.++.... ..=|++|..
T Consensus 66 ~~~~~~~~~~G~iDiLVNN 84 (258)
T PRK08267 66 ALADFCAATGGRLDVLFNN 84 (258)
T ss_pred HHHHHHHHHCCCCCEEEEC
T ss_conf 9999999958998689988
No 326
>PRK07063 short chain dehydrogenase; Provisional
Probab=95.27 E-value=0.27 Score=29.13 Aligned_cols=83 Identities=16% Similarity=0.301 Sum_probs=58.7
Q ss_pred EEEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCC-CCCCEECCCHHHHHHHCCCCCEEEEECCCHHH
Q ss_conf 05698--1571116889999978985999739989999999712211-27840328989998605778899997699069
Q gi|254780716|r 5 DIGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGL-SQKVIVTKNLEQMVEAVCKPRKILMMVTDGDP 81 (475)
Q Consensus 5 ~IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~-~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~ 81 (475)
++.+| |-+-+|..+|+.|++.|.+|.+.||+.++.++..++.... +..+ ..+-.-|.+.+.
T Consensus 8 KvalVTGa~~GIG~aiA~~~a~~Ga~V~i~~~~~~~~~~~~~~l~~~~g~~~----------------~~~~~Dvt~~~~ 71 (259)
T PRK07063 8 KVALVTGAAQGIGAAIARAFVREGAAVALADLDAALAERAAAAIARQTGARV----------------LALPADVTRAAS 71 (259)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCEE----------------EEEECCCCCHHH
T ss_conf 8899958787899999999998799899997987899999999988509918----------------999836899999
Q ss_pred HHHHHHHHHHCCCCCCEEEECC
Q ss_conf 9999999972078998999679
Q gi|254780716|r 82 VDQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 82 v~~vi~~l~~~l~~g~iiID~s 103 (475)
++++++.+.....+=|++|...
T Consensus 72 v~~~v~~~~~~~G~iDiLVNNA 93 (259)
T PRK07063 72 VRAAVARAEAAFGPLDVLVNNA 93 (259)
T ss_pred HHHHHHHHHHHHCCCCEEEECC
T ss_conf 9999999999819988999899
No 327
>PRK05875 short chain dehydrogenase; Provisional
Probab=95.21 E-value=0.21 Score=29.88 Aligned_cols=81 Identities=14% Similarity=0.151 Sum_probs=54.3
Q ss_pred ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHH
Q ss_conf 15711168899999789859997399899999997122112784032898999860577889999769906999999999
Q gi|254780716|r 10 GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQLIDKL 89 (475)
Q Consensus 10 GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi~~l 89 (475)
|-+-+|.++|+.|++.|.+|.+.+|+.++.++..++........ .....+-.-|.+.+.+++.++.+
T Consensus 15 as~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~~~~-------------~~v~~~~~Dvs~~~~v~~~v~~~ 81 (277)
T PRK05875 15 GGSGIGKGVAAALVAAGAAVMIVGRNPDKLAAAAEEIEALAGGA-------------GAVRYEPADVTNEDEVARAVDAA 81 (277)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCC-------------CEEEEEECCCCCHHHHHHHHHHH
T ss_conf 87499999999999879989999798899999999999612788-------------62899957899999999999999
Q ss_pred HHCCCCCCEEEECC
Q ss_conf 72078998999679
Q gi|254780716|r 90 KPLLSPEDILLDGG 103 (475)
Q Consensus 90 ~~~l~~g~iiID~s 103 (475)
......=|++|.+.
T Consensus 82 ~~~~g~iD~LVnnA 95 (277)
T PRK05875 82 TAWHGRLHGVVHCA 95 (277)
T ss_pred HHHHCCCEEEEECC
T ss_conf 99849953999878
No 328
>PRK07806 short chain dehydrogenase; Provisional
Probab=95.20 E-value=0.2 Score=30.06 Aligned_cols=81 Identities=15% Similarity=0.251 Sum_probs=56.9
Q ss_pred EEEE--ECCHHHHHHHHHHHHCCCEEEEEECC-HHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 5698--15711168899999789859997399-89999999712211278403289899986057788999976990699
Q gi|254780716|r 6 IGII--GLGSMGSNLSLNILDKGFRLAVYNKD-FELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 6 IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~-~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
+.+| |-.-+|..+|+.|++.|++|.+.+|+ .++.+++.++-...+.... .+-.-|.+.+.+
T Consensus 8 valVTGas~GIG~aiA~~la~~Ga~Vvi~~~~~~~~a~~~~~~i~~~g~~a~----------------~~~~Dvtd~~~v 71 (248)
T PRK07806 8 IALVTGSSRGIGAEVAKYLAGAGAHVVVNYRNKAARAEKVVAEIRAAGGRAS----------------AVGADLTDEASV 71 (248)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCEEE----------------EEECCCCCHHHH
T ss_conf 8999378859999999999987998999838956899999999996198399----------------997899999999
Q ss_pred HHHHHHHHHCCCCCCEEEEC
Q ss_conf 99999997207899899967
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDG 102 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~ 102 (475)
+++++.+......=||+|.-
T Consensus 72 ~~l~~~~~~~~G~iDiLVnN 91 (248)
T PRK07806 72 AALMDAIRAEFGGLDALVLN 91 (248)
T ss_pred HHHHHHHHHHCCCCCEEEEC
T ss_conf 99999999984999899989
No 329
>PRK05872 short chain dehydrogenase; Provisional
Probab=95.19 E-value=0.3 Score=28.71 Aligned_cols=79 Identities=11% Similarity=0.242 Sum_probs=58.0
Q ss_pred EEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 5698--15711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 6 IGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 6 IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
+.+| |-+-+|..+|+.|++.|.+|.+.||+.++.+++.++.. .... .+-.-|.+.+.++
T Consensus 11 valITGassGIG~aiA~~la~~Ga~Vvl~dr~~~~l~~~~~~lg---~~~~----------------~~~~DVtd~~~v~ 71 (296)
T PRK05872 11 VVFVTGAARGVGAELARRLHARGAKVALVDLEEAELAALAAELG---DRVL----------------TVVADVTDLAAMQ 71 (296)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHC---CCEE----------------EEEEECCCHHHHH
T ss_conf 79992710589999999999879989999899999999999838---8738----------------9998279999999
Q ss_pred HHHHHHHHCCCCCCEEEECC
Q ss_conf 99999972078998999679
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~s 103 (475)
++++.+.....+=|++|...
T Consensus 72 ~~v~~i~~~~G~iDiLVnNA 91 (296)
T PRK05872 72 AAAEEAVERFGGIDVVVANA 91 (296)
T ss_pred HHHHHHHHHHCCCCEEEECC
T ss_conf 99999999719987876556
No 330
>pfam00107 ADH_zinc_N Zinc-binding dehydrogenase.
Probab=95.18 E-value=0.3 Score=28.71 Aligned_cols=36 Identities=17% Similarity=0.229 Sum_probs=27.7
Q ss_pred ECCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHCCC
Q ss_conf 15711168899999789-8599973998999999971221
Q gi|254780716|r 10 GLGSMGSNLSLNILDKG-FRLAVYNKDFELTDVFIKKISG 48 (475)
Q Consensus 10 GLG~MG~~mA~nL~~~G-~~V~vydr~~~~~~~l~~~~~~ 48 (475)
|+|.|.-.+|+.+ | .+|.+.|+++++.+...+.|+.
T Consensus 1 giG~~~iq~ak~~---Ga~~Vi~~~~~~~r~~~a~~lGa~ 37 (131)
T pfam00107 1 GVGLAAVQLAKAL---GAARVIAVDRSEEKLELAKELGAD 37 (131)
T ss_pred CHHHHHHHHHHHC---CCCEEEEEECCHHHHHHHHHCCCC
T ss_conf 9589999999984---998799996988999999975997
No 331
>PRK05876 short chain dehydrogenase; Provisional
Probab=95.18 E-value=0.2 Score=29.99 Aligned_cols=82 Identities=17% Similarity=0.218 Sum_probs=55.7
Q ss_pred EEEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 05698--1571116889999978985999739989999999712211278403289899986057788999976990699
Q gi|254780716|r 5 DIGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 5 ~IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
++.+| |-+-+|..+|+.|++.|.+|.+.|++.++.++..++.......+. .+.+-|.+.+.+
T Consensus 7 KvavITGaasGIG~a~A~~la~~Ga~Vvi~d~~~~~l~~~~~~l~~~g~~~~----------------~~~~Dvt~~~~v 70 (275)
T PRK05876 7 RGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVH----------------GVMCDVRHREEV 70 (275)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEE----------------EEECCCCCHHHH
T ss_conf 8799928266999999999998799899997988999999999982698479----------------997888999999
Q ss_pred HHHHHHHHHCCCCCCEEEEC
Q ss_conf 99999997207899899967
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDG 102 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~ 102 (475)
+..++.....+.+=|++|.-
T Consensus 71 ~~l~~~~~~~~G~iDilvnN 90 (275)
T PRK05876 71 THLADEAFRLLGHVDVVFSN 90 (275)
T ss_pred HHHHHHHHHHHCCCCEEECC
T ss_conf 99999999984898851215
No 332
>PRK06179 short chain dehydrogenase; Provisional
Probab=95.16 E-value=0.31 Score=28.67 Aligned_cols=79 Identities=13% Similarity=0.231 Sum_probs=57.6
Q ss_pred CCCCEEEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCC
Q ss_conf 998805698--157111688999997898599973998999999971221127840328989998605778899997699
Q gi|254780716|r 1 MKQADIGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTD 78 (475)
Q Consensus 1 M~k~~IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~ 78 (475)
|++.++.+| |-+=+|..+|+.|+++|++|.+.+|+.++.++. .+ ...+-+-|.+
T Consensus 1 M~~~KvalITGassGIG~a~A~~la~~G~~V~~~~r~~~~~~~~--------~~----------------~~~~~~Dvtd 56 (270)
T PRK06179 1 MSNKKVALVTGASSGIGRATAEALARAGYRVFGTSRNPARATPI--------PG----------------VELLELDVTD 56 (270)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHCC--------CC----------------CEEEEEECCC
T ss_conf 98995899907246999999999998799999996897773054--------89----------------7899910799
Q ss_pred HHHHHHHHHHHHHCCCCCCEEEECC
Q ss_conf 0699999999972078998999679
Q gi|254780716|r 79 GDPVDQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 79 g~~v~~vi~~l~~~l~~g~iiID~s 103 (475)
.+.++++++.+......=|++|...
T Consensus 57 ~~~v~~~~~~~~~~~g~iDiLVNNA 81 (270)
T PRK06179 57 DASVQAAVQEVIARAGRIDVLVNNA 81 (270)
T ss_pred HHHHHHHHHHHHHHHCCCCEEEECC
T ss_conf 9999999999999839988899898
No 333
>PRK08226 short chain dehydrogenase; Provisional
Probab=95.16 E-value=0.31 Score=28.68 Aligned_cols=81 Identities=19% Similarity=0.297 Sum_probs=55.4
Q ss_pred EEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 5698--15711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 6 IGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 6 IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
+.+| |-+-+|.++|+.|++.|.+|.+.|++++ .+++.++.......+ ..+-.-|.+.+.++
T Consensus 8 valVTGas~GIG~aiA~~la~~Ga~Vvi~d~~~~-~~~~~~~~~~~g~~~----------------~~~~~Dvsd~~~v~ 70 (263)
T PRK08226 8 TALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHRC----------------TAVVADVRDPASVA 70 (263)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH-HHHHHHHHHHCCCCE----------------EEEEEECCCHHHHH
T ss_conf 8999473779999999999987998999969879-999999998369917----------------99994179999999
Q ss_pred HHHHHHHHCCCCCCEEEECC
Q ss_conf 99999972078998999679
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~s 103 (475)
+.++.+.....+=|++|...
T Consensus 71 ~~v~~~~~~~G~iDiLVNNA 90 (263)
T PRK08226 71 AAIKRAKEKEGRIDILVNNA 90 (263)
T ss_pred HHHHHHHHHHCCCCEEEECC
T ss_conf 99999999839986999899
No 334
>PRK06227 consensus
Probab=95.15 E-value=0.29 Score=28.92 Aligned_cols=82 Identities=16% Similarity=0.216 Sum_probs=56.1
Q ss_pred EEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 5698--15711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 6 IGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 6 IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
+.+| |-+-+|..+|+.|++.|.+|.+.|++.+..++..++......++ ..+-.-|.+.+.++
T Consensus 7 valVTGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~g~~~----------------~~~~~Dvs~~~~v~ 70 (256)
T PRK06227 7 VAIVTGGGQGIGAAIAQTFAENGAKVVIADIDEEAGLEREEMLRSNGLDA----------------LFVKTDVSDEEDVK 70 (256)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCE----------------EEEECCCCCHHHHH
T ss_conf 89995866889999999999879999999698889999999999559918----------------99981689999999
Q ss_pred HHHHHHHHCCCCCCEEEECC
Q ss_conf 99999972078998999679
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~s 103 (475)
..++++......=|++|...
T Consensus 71 ~~~~~~~~~~G~iDiLVNNA 90 (256)
T PRK06227 71 NMVRKTVERYGGIDILINNA 90 (256)
T ss_pred HHHHHHHHHCCCCCEEEECC
T ss_conf 99999999829997999899
No 335
>PRK06841 short chain dehydrogenase; Provisional
Probab=95.15 E-value=0.31 Score=28.64 Aligned_cols=79 Identities=16% Similarity=0.362 Sum_probs=57.0
Q ss_pred EEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 5698--15711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 6 IGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 6 IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
+.+| |-+-+|..+|+.|++.|.+|.+.||+++..+...+... ..+ ..+..-|.+.+.++
T Consensus 17 valVTGas~GIG~aiA~~la~~Ga~V~i~d~~~~~~~~~~~~~~---~~~----------------~~~~~Dvt~~~~v~ 77 (255)
T PRK06841 17 VAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLG---GNA----------------KGLVCDVSDSQSVE 77 (255)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCC---CCE----------------EEEEEECCCHHHHH
T ss_conf 99997967789999999999879999999698789999998459---966----------------99998469999999
Q ss_pred HHHHHHHHCCCCCCEEEECC
Q ss_conf 99999972078998999679
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~s 103 (475)
+.++.+.....+=|++|...
T Consensus 78 ~~v~~~~~~~g~iDiLVNNA 97 (255)
T PRK06841 78 AAVAAAISAFGRIDILVNSA 97 (255)
T ss_pred HHHHHHHHHHCCCCEEEECC
T ss_conf 99999999819987999899
No 336
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=95.14 E-value=0.31 Score=28.61 Aligned_cols=85 Identities=19% Similarity=0.298 Sum_probs=55.2
Q ss_pred CCCCEEEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECC
Q ss_conf 998805698--1571116889999978985999739989999-9997122112784032898999860577889999769
Q gi|254780716|r 1 MKQADIGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTD-VFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVT 77 (475)
Q Consensus 1 M~k~~IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~-~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp 77 (475)
|+| +.+| |-+-+|..+|+.|+++|++|.+.+|+.++.. ++.+....... ....+-.-+.
T Consensus 1 M~K--valITGas~GIG~a~a~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~D~~ 62 (245)
T PRK12824 1 MKK--IALVTGAKRGIGSAIARELLADGYRVIATYFGNYDAAKDWFEEYGFTED----------------QVRLKSLDVT 62 (245)
T ss_pred CCC--EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCC----------------CEEEEECCCC
T ss_conf 985--9999478888999999999987998999958807789999998740499----------------3899991389
Q ss_pred CHHHHHHHHHHHHHCCCCCCEEEECC
Q ss_conf 90699999999972078998999679
Q gi|254780716|r 78 DGDPVDQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 78 ~g~~v~~vi~~l~~~l~~g~iiID~s 103 (475)
+.+.++..++.+......=|++|...
T Consensus 63 d~~~~~~~v~~~~~~~g~iDiLVnnA 88 (245)
T PRK12824 63 DTEECQEALARIEEEEGPVDILVNNA 88 (245)
T ss_pred CHHHHHHHHHHHHHHCCCCCEEEECC
T ss_conf 99999999999999749998999898
No 337
>PRK09730 hypothetical protein; Provisional
Probab=95.14 E-value=0.21 Score=29.87 Aligned_cols=82 Identities=17% Similarity=0.361 Sum_probs=56.4
Q ss_pred EEEE--ECCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 5698--1571116889999978985999-739989999999712211278403289899986057788999976990699
Q gi|254780716|r 6 IGII--GLGSMGSNLSLNILDKGFRLAV-YNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 6 IGiI--GLG~MG~~mA~nL~~~G~~V~v-ydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
|.+| |-+-+|..+|+.|++.|++|.+ |+++.+..+++.++.......+. .+-.-|.+.+.+
T Consensus 3 ValITGas~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~----------------~~~~Dv~~~~~v 66 (247)
T PRK09730 3 IALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAF----------------VLQADISDENQV 66 (247)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEE----------------EEECCCCCHHHH
T ss_conf 9999062269999999999987999999669987899999999997499289----------------998258999999
Q ss_pred HHHHHHHHHCCCCCCEEEECC
Q ss_conf 999999972078998999679
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~s 103 (475)
+++++.+.....+=|++|...
T Consensus 67 ~~~~~~i~~~~g~id~LVNNA 87 (247)
T PRK09730 67 VAMFTAIDQHDEPLAALVNNA 87 (247)
T ss_pred HHHHHHHHHHCCCCEEEEECC
T ss_conf 999999999759955999898
No 338
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.11 E-value=0.27 Score=29.15 Aligned_cols=84 Identities=13% Similarity=0.374 Sum_probs=58.8
Q ss_pred CEEEEE--ECCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHH
Q ss_conf 805698--1571116889999978985999-7399899999997122112784032898999860577889999769906
Q gi|254780716|r 4 ADIGII--GLGSMGSNLSLNILDKGFRLAV-YNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGD 80 (475)
Q Consensus 4 ~~IGiI--GLG~MG~~mA~nL~~~G~~V~v-ydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~ 80 (475)
-++.+| |-+-+|..+|+.|++.|++|.+ |.++.++.+++.++......++ ..+-.-|.+.+
T Consensus 4 gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~----------------~~~~~Dv~d~~ 67 (250)
T PRK08063 4 GKVALVTGSSRGIGKAIALRLAKEGYDIAINYARSRKAAEETANEIEQLGRKA----------------LVVKANVGDVE 67 (250)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCE----------------EEEECCCCCHH
T ss_conf 49899958766999999999998899899975999899999999999549958----------------99984799999
Q ss_pred HHHHHHHHHHHCCCCCCEEEECC
Q ss_conf 99999999972078998999679
Q gi|254780716|r 81 PVDQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 81 ~v~~vi~~l~~~l~~g~iiID~s 103 (475)
.+++.++.+.....+=|++|...
T Consensus 68 ~v~~~~~~~~~~~G~iDiLVnnA 90 (250)
T PRK08063 68 KIKEMFSQIDEHFGRLDVFVNNA 90 (250)
T ss_pred HHHHHHHHHHHHCCCCCEEEECC
T ss_conf 99999999999809988999878
No 339
>PRK07411 hypothetical protein; Validated
Probab=95.10 E-value=0.13 Score=31.45 Aligned_cols=125 Identities=14% Similarity=0.135 Sum_probs=73.9
Q ss_pred CCEEEEEECCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHCC-C-CCCCCEECCCHHHHHHHCCCCCEEEEECCCH
Q ss_conf 88056981571116889999978985-9997399899999997122-1-1278403289899986057788999976990
Q gi|254780716|r 3 QADIGIIGLGSMGSNLSLNILDKGFR-LAVYNKDFELTDVFIKKIS-G-LSQKVIVTKNLEQMVEAVCKPRKILMMVTDG 79 (475)
Q Consensus 3 k~~IGiIGLG~MG~~mA~nL~~~G~~-V~vydr~~~~~~~l~~~~~-~-~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g 79 (475)
++.|-+||+|-.|.+.|..|+..|.- +.+.|-+.=....+..+-- . ..-+..-+.+.++.+..+. |.+-+...+..
T Consensus 38 ~a~VlvvG~GGLG~p~~~yLaaaGvG~i~ivD~D~ve~sNL~RQ~l~~~~~vG~~K~~~a~~~l~~ln-p~~~i~~~~~~ 116 (390)
T PRK07411 38 AASVLCIGTGGLGSPLLLYLAAAGIGRIGIVDFDIVDSSNLQRQVIHGTSWVGKPKIESAKNRILEIN-PYCQVDLYETR 116 (390)
T ss_pred HCCEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHC-CCCCCEEHHHH
T ss_conf 49789988872379999999983897599974899462347854366620079718999999999868-98642103432
Q ss_pred HHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCC
Q ss_conf 699999999972078998999679865789999999998479943067546760
Q gi|254780716|r 80 DPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGV 133 (475)
Q Consensus 80 ~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~ 133 (475)
-.. +.....++.-|+||||+- ++..-.-....|...++-++-+.+.|.+
T Consensus 117 -l~~---~na~~li~~~DvvvD~tD-Nf~tRylindac~~~~~PlV~ga~~~~~ 165 (390)
T PRK07411 117 -LSS---ENALDILAPYDVVVDGTD-NFPTRYLVNDACVLLNKPNVYGSIFRFE 165 (390)
T ss_pred -CCH---HHHHHHHCCCCEEEECCC-CHHHHHHHHHHHHHHCCCEEEEECCCCE
T ss_conf -555---248874228868996788-8899999899999969987997647778
No 340
>PRK01747 mnmC 5-methylaminomethyl-2-thiouridine methyltransferase; Reviewed
Probab=95.09 E-value=0.033 Score=35.81 Aligned_cols=34 Identities=32% Similarity=0.628 Sum_probs=31.3
Q ss_pred CCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCH
Q ss_conf 8805698157111688999997898599973998
Q gi|254780716|r 3 QADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDF 36 (475)
Q Consensus 3 k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~ 36 (475)
..+|.|||-|..|..+|..|++.|++|.|+|+..
T Consensus 256 ~~~VaVIGAGIAGas~A~~LA~rG~~VtVlDr~~ 289 (660)
T PRK01747 256 NRDAAIIGGGIAGAALALALARRGWQVTLYEADE 289 (660)
T ss_pred CCCEEEECCHHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf 8718998938999999999997899689994798
No 341
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.05 E-value=0.26 Score=29.17 Aligned_cols=78 Identities=15% Similarity=0.218 Sum_probs=54.1
Q ss_pred ECCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHH
Q ss_conf 1571116889999978985999-739989999999712211278403289899986057788999976990699999999
Q gi|254780716|r 10 GLGSMGSNLSLNILDKGFRLAV-YNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQLIDK 88 (475)
Q Consensus 10 GLG~MG~~mA~nL~~~G~~V~v-ydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi~~ 88 (475)
|-.-+|..+|..|++.|++|.+ ++++.+..++..++......+.. .+-.-|.+.+.++++++.
T Consensus 11 gs~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~----------------~~~~Dvs~~~~v~~~~~~ 74 (249)
T PRK06077 11 SGRGIGRAIAVRLAKEGAKVVVNAKKRAEEMNETLRMVKEYGGEGI----------------GVLADVSTREGCRTLAKA 74 (249)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCEE----------------EEECCCCCHHHHHHHHHH
T ss_conf 3678999999999987998999848876899999999997599589----------------998479999999999999
Q ss_pred HHHCCCCCCEEEECC
Q ss_conf 972078998999679
Q gi|254780716|r 89 LKPLLSPEDILLDGG 103 (475)
Q Consensus 89 l~~~l~~g~iiID~s 103 (475)
....+..=|++|..-
T Consensus 75 ~~~~~g~iDiLVnNA 89 (249)
T PRK06077 75 ALDNFGVVDILVNNA 89 (249)
T ss_pred HHHHHCCCCEEEECC
T ss_conf 999819988899857
No 342
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=95.04 E-value=0.2 Score=30.02 Aligned_cols=210 Identities=14% Similarity=0.094 Sum_probs=115.1
Q ss_pred CEEEEEEC-CHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHCCCCCCCC-EECC--CHHHHHHHCCCCCEEEEECCC
Q ss_conf 80569815-711168899999789-859997399899999997122112784-0328--989998605778899997699
Q gi|254780716|r 4 ADIGIIGL-GSMGSNLSLNILDKG-FRLAVYNKDFELTDVFIKKISGLSQKV-IVTK--NLEQMVEAVCKPRKILMMVTD 78 (475)
Q Consensus 4 ~~IGiIGL-G~MG~~mA~nL~~~G-~~V~vydr~~~~~~~l~~~~~~~~~~~-~~~~--s~~e~v~~l~~pr~Iil~vp~ 78 (475)
.+||+||- |--|..+.+-|+.+- .++..+..+..+-+.+.+......... ..+. ++++. ..+.++++|+++|+
T Consensus 3 ~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~~g~~~~~~~p~l~g~~~l~~~~~~~~~~--~~~~~DvvFlalPh 80 (349)
T COG0002 3 IKVGIVGASGYTGLELLRLLAGHPDVELILISSRERAGKPVSDVHPNLRGLVDLPFQTIDPEKI--ELDECDVVFLALPH 80 (349)
T ss_pred CEEEEECCCCCCHHHHHHHHHCCCCEEEEEEECHHHCCCCHHHHCCCCCCCCCCCCCCCCHHHH--HCCCCCEEEEECCC
T ss_conf 1599977887748999999865997379996316645870687582423534554335774553--01568889990686
Q ss_pred HHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHC---CCCEECCCCCCCCCCC---CCCC-EE-EEECCHH-
Q ss_conf 069999999997207899899967986578999999999847---9943067546760003---5684-37-8845489-
Q gi|254780716|r 79 GDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEK---GIYFIGIGVSGGVKGA---RSGA-SL-MVGGNEK- 149 (475)
Q Consensus 79 g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~k---gi~fid~pVSGG~~gA---~~G~-sl-MvGG~~~- 149 (475)
|...+-| .. .+++|..|||+|+.+.-.....+++.-+. +-..++--|-|=++-- .++. .+ -+|+-..
T Consensus 81 g~s~~~v-~~---l~~~g~~VIDLSadfR~~d~~~ye~~Yg~~h~~~~~l~~avYGLpEl~~e~i~~A~lIAnPGCypTa 156 (349)
T COG0002 81 GVSAELV-PE---LLEAGCKVIDLSADFRLKDPEVYEKWYGFTHAGPELLEDAVYGLPELHREKIRGAKLIANPGCYPTA 156 (349)
T ss_pred HHHHHHH-HH---HHHCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHHHHCCCEEECCCCHHHH
T ss_conf 3688989-99---9747994998873200577777788627777780133154334731298888338773679832889
Q ss_pred HHHHHHHHHHHHHCCCCCCC--EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
Q ss_conf 99888999998750156786--189856987467898877678788899989999999964289978999999860688
Q gi|254780716|r 150 AYNRVENILLSISAKYQNSP--CCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKNPLEISHLFSKWDTG 226 (475)
Q Consensus 150 ~~~~~~piL~~iaak~~~~~--cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~~i~~vf~~w~~~ 226 (475)
+.-.+.|+++.=--. .+.+ .-...|-+|+|--.++-+..-|-.. .+..-+-..+..-.||......|.+.
T Consensus 157 ~iLal~PL~~~~ll~-~~~~~ivdakSG~SGaGrk~s~~~~~~e~~~------~~~~Y~~~~HrH~pEi~q~l~~l~~~ 228 (349)
T COG0002 157 AILALAPLVKAGLLD-PDSPPIVDAKSGVSGAGRKASVKNHFPEVND------SLRPYGLTGHRHTPEIEQHLGRLAGR 228 (349)
T ss_pred HHHHHHHHHHCCCCC-CCCCEEEEEEEECCCCCCCCCCCCCCHHHCC------CCCCCCCCCCCCHHHHHHHHHHHCCC
T ss_conf 999888998769978-8886489976746767878530025511036------63335445667659999986010167
No 343
>PRK12746 short chain dehydrogenase; Provisional
Probab=95.04 E-value=0.22 Score=29.77 Aligned_cols=43 Identities=16% Similarity=0.458 Sum_probs=34.9
Q ss_pred EEEEE--ECCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHCC
Q ss_conf 05698--1571116889999978985999-7399899999997122
Q gi|254780716|r 5 DIGII--GLGSMGSNLSLNILDKGFRLAV-YNKDFELTDVFIKKIS 47 (475)
Q Consensus 5 ~IGiI--GLG~MG~~mA~nL~~~G~~V~v-ydr~~~~~~~l~~~~~ 47 (475)
++.+| |-+-+|..+|+.|++.|++|.+ |+|+.++.+++.++-.
T Consensus 7 KvalITGga~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~ 52 (254)
T PRK12746 7 KVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKAAADETIREIE 52 (254)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHH
T ss_conf 8899948476899999999998799999965999899999999998
No 344
>PRK08339 short chain dehydrogenase; Provisional
Probab=95.02 E-value=0.33 Score=28.43 Aligned_cols=81 Identities=16% Similarity=0.231 Sum_probs=51.0
Q ss_pred EEEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 05698--1571116889999978985999739989999999712211278403289899986057788999976990699
Q gi|254780716|r 5 DIGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 5 ~IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
++.+| |-+-+|.++|+.|++.|.+|.+.+|+.++.++..++...... . +...+..-+.+.+.+
T Consensus 9 K~alITG~s~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~~~-~--------------~~~~~~~D~~~~~~v 73 (263)
T PRK08339 9 KLAFTTASSKGIGFGVARVLARAGADVIILSRNEENLKRAKEKIKSESD-V--------------EVHYIVADLTKREDL 73 (263)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCC-C--------------CEEEEECCCCCHHHH
T ss_conf 9899916260999999999998699999997988999999999985049-8--------------579998489999999
Q ss_pred HHHHHHHHHCCCCCCEEEE
Q ss_conf 9999999720789989996
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLD 101 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID 101 (475)
++++..+... ..-|++|.
T Consensus 74 ~~~~~~~~~~-g~~dilv~ 91 (263)
T PRK08339 74 ERTVKELKNI-GDPDIFFF 91 (263)
T ss_pred HHHHHHHHHH-CCCCEEEE
T ss_conf 9999999956-99989998
No 345
>COG0476 ThiF Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 [Coenzyme metabolism]
Probab=95.00 E-value=0.19 Score=30.21 Aligned_cols=127 Identities=14% Similarity=0.155 Sum_probs=73.9
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHCC-CCCC-CCEECCCHHHHHHHCCCCCEEEEECC
Q ss_conf 9988056981571116889999978985-9997399899999997122-1127-84032898999860577889999769
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGFR-LAVYNKDFELTDVFIKKIS-GLSQ-KVIVTKNLEQMVEAVCKPRKILMMVT 77 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~~-V~vydr~~~~~~~l~~~~~-~~~~-~~~~~~s~~e~v~~l~~pr~Iil~vp 77 (475)
|+.+++-+||+|-.|.+.+.+|+..|.. +.++|.+.-....+..+.- .... +..-+.+.++....+. |.+.+....
T Consensus 28 l~~s~vlvvG~GglG~~~~~~la~aGvg~l~i~D~d~v~~snL~rq~~~~~~dig~~Ka~~a~~~l~~ln-~~v~v~~~~ 106 (254)
T COG0476 28 LKDSRVLVVGAGGLGSPAAKYLALAGVGKLTIVDFDTVELSNLQRQFLFTEADVGKPKAEVAAKALRKLN-PLVEVVAYL 106 (254)
T ss_pred HHHCEEEEECCCCCCCHHHHHHHHCCCCEEEEEECCEEEECCCCCEEECCHHHCCCCHHHHHHHHHHHHC-CCCEEEEEE
T ss_conf 7648289977763351999999982698599985885770015650303341168888999999999978-994899852
Q ss_pred CHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCC
Q ss_conf 90699999999972078998999679865789999999998479943067546760
Q gi|254780716|r 78 DGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGV 133 (475)
Q Consensus 78 ~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~ 133 (475)
.. ...+. ........|+++|++-. +..-......+...++-+++.++-|-.
T Consensus 107 ~~-l~~~~---~~~~~~~~d~v~d~~dn-~~~r~~iN~~~~~~~~pli~~~~~~~~ 157 (254)
T COG0476 107 ER-LDEEN---AEELIAQFDVVLDCTDN-FETRYLINDACVKLGIPLVHGGAIGFE 157 (254)
T ss_pred CC-CCHHH---HHHHHHCCCEEEECCCC-HHHHHHHHHHHHHHCCCEEECCCCCCE
T ss_conf 33-66778---99987158899973351-778999999999849988963126626
No 346
>PRK07102 short chain dehydrogenase; Provisional
Probab=94.94 E-value=0.35 Score=28.23 Aligned_cols=44 Identities=25% Similarity=0.291 Sum_probs=36.1
Q ss_pred CCCCEEEEEECC-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHC
Q ss_conf 998805698157-1116889999978985999739989999999712
Q gi|254780716|r 1 MKQADIGIIGLG-SMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKI 46 (475)
Q Consensus 1 M~k~~IGiIGLG-~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~ 46 (475)
|++ |=+.|-+ -+|..+|+.|+++|++|.+.+|+.++.+++.++.
T Consensus 1 MK~--vlITGassGIG~a~A~~la~~G~~v~l~~R~~~~l~~~~~~l 45 (243)
T PRK07102 1 MKK--ILIIGATSDIARACARRYAAAGARLYLAARDTERLERIAADL 45 (243)
T ss_pred CCE--EEEECCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
T ss_conf 997--999157459999999999987998999989889999999999
No 347
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.93 E-value=0.36 Score=28.21 Aligned_cols=82 Identities=16% Similarity=0.298 Sum_probs=53.7
Q ss_pred EEEEECC-HHHHHHHHHHHHCCCEEEEEECC-HHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 5698157-11168899999789859997399-899999997122112784032898999860577889999769906999
Q gi|254780716|r 6 IGIIGLG-SMGSNLSLNILDKGFRLAVYNKD-FELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 6 IGiIGLG-~MG~~mA~nL~~~G~~V~vydr~-~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
+=+.|-+ -+|.++|+.|++.|++|.+.+|+ .+..+++.++......+ ...+-+-|.+.+.++
T Consensus 10 ~lITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~Dl~~~~~~~ 73 (250)
T PRK12825 10 ALVTGAARGIGRAIALRLAAAGADVIVHPPSDEAAAEETVAAVEALGRR----------------AQAVQADVTDAAALE 73 (250)
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCC----------------EEEEEEECCCHHHHH
T ss_conf 9993895589999999999879989999798878999999999853994----------------899994189999999
Q ss_pred HHHHHHHHCCCCCCEEEECC
Q ss_conf 99999972078998999679
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~s 103 (475)
+.++.+.....+=|++|...
T Consensus 74 ~~~~~~~~~~g~iDilInnA 93 (250)
T PRK12825 74 AAVEELVERFGAIDILVNNA 93 (250)
T ss_pred HHHHHHHHHCCCCCEEEECC
T ss_conf 99999999769998999899
No 348
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=94.89 E-value=0.14 Score=31.27 Aligned_cols=62 Identities=15% Similarity=0.349 Sum_probs=50.1
Q ss_pred CEEEEEECCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 8056981571116889999978-985999739989999999712211278403289899986057788999976990699
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDK-GFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~-G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
.++-|+|.|.+|.++|.-|+.. +-+|.++|| ++++.+-+.+..+
T Consensus 24 ~~v~v~G~G~vg~~ia~ll~~~~~k~V~~~d~-----------------------------------Di~v~~t~~~~~~ 68 (86)
T cd05191 24 KTVVVLGAGEVGKGIAKLLADEGGKKVVLCDR-----------------------------------DILVTATPAGVPV 68 (86)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEECCC-----------------------------------CEEEECCCCCCCC
T ss_conf 58999778604289999999817970787155-----------------------------------5288605778712
Q ss_pred HHHHHHHHHCCCCCCEEEECC
Q ss_conf 999999972078998999679
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~s 103 (475)
.+. ..+...++.+++|+.
T Consensus 69 ~~~---~~~~~~~~~vv~~~a 86 (86)
T cd05191 69 LEE---ATAKINEGAVVIDLA 86 (86)
T ss_pred HHH---HHHHCCCCCEEEECC
T ss_conf 787---764216871888539
No 349
>PRK09436 thrA bifunctional aspartokinase I/homeserine dehydrogenase I; Provisional
Probab=94.88 E-value=0.37 Score=28.13 Aligned_cols=18 Identities=22% Similarity=0.606 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHHHCCCCH
Q ss_conf 476999999999839984
Q gi|254780716|r 403 IPSLRRIVVTCTENGYPV 420 (475)
Q Consensus 403 ~~~lr~vv~~~i~~gip~ 420 (475)
.+..|+++.++-+.|.++
T Consensus 677 ~DvarKl~ILAre~G~~~ 694 (817)
T PRK09436 677 MDVARKLLILAREAGYEL 694 (817)
T ss_pred CCHHHHHHHHHHHHCCCC
T ss_conf 438999999999858888
No 350
>KOG0023 consensus
Probab=94.87 E-value=0.27 Score=29.13 Aligned_cols=40 Identities=28% Similarity=0.543 Sum_probs=29.8
Q ss_pred EEEEEECCHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHH
Q ss_conf 05698157111688999997-898599973998999999971
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILD-KGFRLAVYNKDFELTDVFIKK 45 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~-~G~~V~vydr~~~~~~~l~~~ 45 (475)
.||++|||-.| .||-.+++ .|++|.+.|++..+-++..+.
T Consensus 184 ~vgI~GlGGLG-h~aVq~AKAMG~rV~vis~~~~kkeea~~~ 224 (360)
T KOG0023 184 WVGIVGLGGLG-HMAVQYAKAMGMRVTVISTSSKKKEEAIKS 224 (360)
T ss_pred EEEEECCCCCC-HHHHHHHHHHCCEEEEEECCCHHHHHHHHH
T ss_conf 89885576401-689999987086799992785348999985
No 351
>pfam01118 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. This Pfam entry contains the following members: N-acetyl-glutamine semialdehyde dehydrogenase (AgrC) Aspartate-semialdehyde dehydrogenase
Probab=94.86 E-value=0.083 Score=32.85 Aligned_cols=95 Identities=16% Similarity=0.248 Sum_probs=55.8
Q ss_pred EEEEEE-CCHHHHHHHHHHHHCC-CEE-EEEECCHHHHHHHHHHCCCC--CCCCEECCCHHHHHHHCCCCCEEEEECCCH
Q ss_conf 056981-5711168899999789-859-99739989999999712211--278403289899986057788999976990
Q gi|254780716|r 5 DIGIIG-LGSMGSNLSLNILDKG-FRL-AVYNKDFELTDVFIKKISGL--SQKVIVTKNLEQMVEAVCKPRKILMMVTDG 79 (475)
Q Consensus 5 ~IGiIG-LG~MG~~mA~nL~~~G-~~V-~vydr~~~~~~~l~~~~~~~--~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g 79 (475)
+||+|| -|.-|.-+.+.|.++- +++ .++.++++.-+.+....... .... ...++.+ ..++..+++|+++|++
T Consensus 1 kvaIiGatGyvG~eLirlL~~hp~~~i~~l~~s~~saG~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~Dvvf~alp~~ 77 (121)
T pfam01118 1 KVAIVGATGYVGQELLRLLAEHPPLELVALVASSRSAGKKVAFAGPWLTGGVDL-LLEDVDP--EDLKDVDIVFFALPAG 77 (121)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHCCCCCCCCCC-EEEECCH--HHHCCCCEEEECCCHH
T ss_conf 999989361999999999971887551378850565896014416542466664-4775897--7853898999838768
Q ss_pred HHHHHHHHHHHHCCCCCCEEEECCCCC
Q ss_conf 699999999972078998999679865
Q gi|254780716|r 80 DPVDQLIDKLKPLLSPEDILLDGGNSH 106 (475)
Q Consensus 80 ~~v~~vi~~l~~~l~~g~iiID~sts~ 106 (475)
...++...+ ++.|-.|||.|..+
T Consensus 78 -~s~~~~~~~---~~~g~~VIDlS~df 100 (121)
T pfam01118 78 -VSKELAPKL---LEAGAVVIDLSSAF 100 (121)
T ss_pred -HHHHHHHHH---HHCCCEEEECCHHH
T ss_conf -999999998---71598998785675
No 352
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase; InterPro: IPR011283 This entry represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of 1.1.1.36 from EC is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. ; GO: 0018454 acetoacetyl-CoA reductase activity, 0042619 poly-hydroxybutyrate biosynthetic process, 0005737 cytoplasm.
Probab=94.85 E-value=0.26 Score=29.20 Aligned_cols=84 Identities=17% Similarity=0.315 Sum_probs=64.1
Q ss_pred ECCHHHHHHHHHHHHCCCEEEE-EEC-CHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHH
Q ss_conf 1571116889999978985999-739-98999999971221127840328989998605778899997699069999999
Q gi|254780716|r 10 GLGSMGSNLSLNILDKGFRLAV-YNK-DFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQLID 87 (475)
Q Consensus 10 GLG~MG~~mA~nL~~~G~~V~v-ydr-~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi~ 87 (475)
|+|=.|.++..+|++.||+|.. |-. +.++.+++.++-...+..+. ++-.=|.+-++..+.+.
T Consensus 8 g~GGIGtAIC~rL~~dG~~V~An~~p~N~~~a~~W~~~~~~~g~~~~----------------~~~~DV~~~e~c~~~v~ 71 (244)
T TIGR01829 8 GTGGIGTAICTRLAKDGYRVAANYVPSNEERAEAWLQEQGAQGFDFA----------------VVEGDVSSFEDCKAAVA 71 (244)
T ss_pred CCCCHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEE----------------EEECCCCCHHHHHHHHH
T ss_conf 87744689999998759889881789825899999986269851478----------------98727677789999999
Q ss_pred HHHHCCCCCCEEEECCCCCHHH
Q ss_conf 9972078998999679865789
Q gi|254780716|r 88 KLKPLLSPEDILLDGGNSHFCD 109 (475)
Q Consensus 88 ~l~~~l~~g~iiID~sts~~~~ 109 (475)
++..-+-|=||+|..-=...+.
T Consensus 72 ~v~a~lGpvDvLVNNAGITRD~ 93 (244)
T TIGR01829 72 KVEAELGPVDVLVNNAGITRDK 93 (244)
T ss_pred HHHHCCCCEEEEEECCCCCCCH
T ss_conf 9997119536898688644030
No 353
>PRK08945 short chain dehydrogenase; Provisional
Probab=94.84 E-value=0.37 Score=28.05 Aligned_cols=78 Identities=14% Similarity=0.193 Sum_probs=50.8
Q ss_pred ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEEC--CCHHHHHHHHH
Q ss_conf 1571116889999978985999739989999999712211278403289899986057788999976--99069999999
Q gi|254780716|r 10 GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMV--TDGDPVDQLID 87 (475)
Q Consensus 10 GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~v--p~g~~v~~vi~ 87 (475)
|-+-+|..+|+.|+++|.+|.+.+|+.++.+++.++-..... ..+.++-+-+ .+.+.++++++
T Consensus 21 as~GIG~aiA~~la~~Ga~Vil~~r~~~~l~~~~~el~~~~~---------------~~~~~~~~d~~~~~~~~~~~~~~ 85 (245)
T PRK08945 21 AGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGG---------------PQPAIIPLDLLGATEQNYQDLAD 85 (245)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCC---------------CCEEEEEEECCCCCHHHHHHHHH
T ss_conf 861899999999998799899996988999999999997479---------------84489994467599999999999
Q ss_pred HHHHCCCCCCEEEEC
Q ss_conf 997207899899967
Q gi|254780716|r 88 KLKPLLSPEDILLDG 102 (475)
Q Consensus 88 ~l~~~l~~g~iiID~ 102 (475)
.+.....+=|++|..
T Consensus 86 ~i~~~~g~iD~lVnN 100 (245)
T PRK08945 86 TIEEQFGRLDGVLHN 100 (245)
T ss_pred HHHHHHCCCCEEEEC
T ss_conf 999980998799988
No 354
>PRK07707 consensus
Probab=94.77 E-value=0.39 Score=27.92 Aligned_cols=44 Identities=20% Similarity=0.504 Sum_probs=36.2
Q ss_pred CCCCEEEEE--ECCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHC
Q ss_conf 998805698--1571116889999978985999-739989999999712
Q gi|254780716|r 1 MKQADIGII--GLGSMGSNLSLNILDKGFRLAV-YNKDFELTDVFIKKI 46 (475)
Q Consensus 1 M~k~~IGiI--GLG~MG~~mA~nL~~~G~~V~v-ydr~~~~~~~l~~~~ 46 (475)
|+| +.+| |-+-+|..+|+.|++.|++|.+ |++++++.+++.++.
T Consensus 1 M~K--valVTG~s~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~ 47 (239)
T PRK07707 1 MKK--YALVTGASGGIGQAISKQLAQDGYTVYLHYNNNEEKVNELQEEL 47 (239)
T ss_pred CCC--EEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHH
T ss_conf 998--99996688789999999999879989998399989999999984
No 355
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=94.74 E-value=0.11 Score=31.89 Aligned_cols=23 Identities=17% Similarity=0.309 Sum_probs=14.7
Q ss_pred CCEEEEECCHHHHHHHHHHHHHH
Q ss_conf 84378845489998889999987
Q gi|254780716|r 139 GASLMVGGNEKAYNRVENILLSI 161 (475)
Q Consensus 139 G~slMvGG~~~~~~~~~piL~~i 161 (475)
|+==||=|+.+..-+++.-++.-
T Consensus 99 GLDSmVlGE~QIlGQVK~Ay~~A 121 (338)
T PRK00676 99 GMDSLILGETEIQGQVKRAYLKA 121 (338)
T ss_pred CCHHHHCCCHHHHHHHHHHHHHH
T ss_conf 34035328689999999999999
No 356
>PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional
Probab=94.68 E-value=0.22 Score=29.75 Aligned_cols=152 Identities=16% Similarity=0.170 Sum_probs=81.8
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHC-CCEEEEEECCHHHHHH--HHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECC
Q ss_conf 9988056981571116889999978-9859997399899999--997122112784032898999860577889999769
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDK-GFRLAVYNKDFELTDV--FIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVT 77 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~-G~~V~vydr~~~~~~~--l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp 77 (475)
|+. +||+-|.|..|+..|.-+... ..+|.+.+.+....+. ..+.|- .+ +....+.++.++...
T Consensus 1 m~i-kV~INGyGtIGkRVAdav~~q~DmelVGV~k~~pd~~a~~a~~kG~----~v--y~~~~~~~~~F~~aG------- 66 (338)
T PRK04207 1 MMI-KVAVNGYGTIGKRVADAVAAQDDMEVVGVSKTKPDYEARVAVERGY----PL--YVADPERLDAFEKAG------- 66 (338)
T ss_pred CCE-EEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCC----CE--EECCHHHHHHHHHCC-------
T ss_conf 948-9998248605589988873599818997867999778999998699----67--853776665687569-------
Q ss_pred CHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEECCHHHHHHHHHH
Q ss_conf 90699999999972078998999679865789999999998479943067546760003568437884548999888999
Q gi|254780716|r 78 DGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGVKGARSGASLMVGGNEKAYNRVENI 157 (475)
Q Consensus 78 ~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~~gA~~G~slMvGG~~~~~~~~~pi 157 (475)
-.+.-.++ ..++.-|+||||+-......-+ +.-.+.|+..| ..||+.....+.+|-.+.+.+.
T Consensus 67 --i~v~Gtie---dll~~aDvVvDcTP~g~G~~Nk--~~Y~~~g~kaI---fQGGEk~~va~~sFna~~Ny~~------- 129 (338)
T PRK04207 67 --IEVAGTIE---DLLEKADIVVDATPGGVGAKNK--PLYEKAGVKAI---FQGGEKAEVAEVSFNALANYEE------- 129 (338)
T ss_pred --CCCCCCHH---HHHHCCCEEEECCCCCCCCCCH--HHHHHCCCCEE---EECCCCCCCCCCEEEEECCHHH-------
T ss_conf --86667688---9752189999899976440022--76887598379---9658876767750673014577-------
Q ss_pred HHHHHCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 9987501567861898569874678988776
Q gi|254780716|r 158 LLSISAKYQNSPCCALLGPDGSGHFVKMIHN 188 (475)
Q Consensus 158 L~~iaak~~~~~cv~y~G~~GsGh~vKMVhN 188 (475)
++....- -+.=|--.|-+-.++-+++
T Consensus 130 --a~Gk~~v---rvvSCNTTgL~R~l~~L~~ 155 (338)
T PRK04207 130 --AIGKDYV---RVVSCNTTGLCRTLYPLRE 155 (338)
T ss_pred --HCCCCCE---EEEEECCCCHHHHHHHHHH
T ss_conf --6387637---9965320345788999987
No 357
>PRK07074 short chain dehydrogenase; Provisional
Probab=94.68 E-value=0.41 Score=27.77 Aligned_cols=78 Identities=22% Similarity=0.391 Sum_probs=51.3
Q ss_pred EEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 5698--15711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 6 IGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 6 IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
+.+| |-+-+|..+|+.|++.|..|.++||+.++.+++.++... .++. .+..-+.+.+.++
T Consensus 4 valITGgs~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~--~~~~----------------~~~~Dv~~~~~~~ 65 (256)
T PRK07074 4 TALVTGAAGGIGQALARRFLAAGDRVLALDIDRAALAAFVDALGD--AAVA----------------PVICDLTDAASVE 65 (256)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCC--CCEE----------------EEEEECCCHHHHH
T ss_conf 899988468999999999998699999997988999999998269--9779----------------9997279999999
Q ss_pred HHHHHHHHCCCCCCEEEEC
Q ss_conf 9999997207899899967
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDG 102 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~ 102 (475)
.+.+.+..+ .+=|++|.-
T Consensus 66 ~~~~~i~~~-g~iDiLVNN 83 (256)
T PRK07074 66 RLAAALANE-GPVDVLVAN 83 (256)
T ss_pred HHHHHHHHH-CCCCEEEEC
T ss_conf 999999985-998799988
No 358
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=94.67 E-value=0.13 Score=31.55 Aligned_cols=125 Identities=15% Similarity=0.159 Sum_probs=72.6
Q ss_pred CCEEEEEECCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHCC-CC-CCCCEECCCHHHHHHHCCCCCEEEEECCCH
Q ss_conf 88056981571116889999978985-9997399899999997122-11-278403289899986057788999976990
Q gi|254780716|r 3 QADIGIIGLGSMGSNLSLNILDKGFR-LAVYNKDFELTDVFIKKIS-GL-SQKVIVTKNLEQMVEAVCKPRKILMMVTDG 79 (475)
Q Consensus 3 k~~IGiIGLG~MG~~mA~nL~~~G~~-V~vydr~~~~~~~l~~~~~-~~-~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g 79 (475)
++.|-+||+|-.|.+.|..|+..|.- +.+.|.+.=....+..+-- .. .-+..-+.+.++.+..+. |.+-+..++..
T Consensus 42 ~a~VlvvG~GGLG~~~~~yLaaaGvG~i~ivD~D~v~~sNL~RQil~~~~dvG~~K~~~a~~~l~~~N-p~v~v~~~~~~ 120 (392)
T PRK07878 42 NARVLVIGAGGLGSPTLLYLAAAGVGTIGIVEFDVVDESNLQRQIIHGQSDVGRSKAQSARDSIVEIN-PLVNVRLHEFR 120 (392)
T ss_pred HCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHC-CCCCCEEHHHC
T ss_conf 19789987875789999999982897599987899674557720056843358707999999999878-98531211313
Q ss_pred HHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCC
Q ss_conf 699999999972078998999679865789999999998479943067546760
Q gi|254780716|r 80 DPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGV 133 (475)
Q Consensus 80 ~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~ 133 (475)
... +.....++.-|+||||+- ++..-.-....|...++-++-+.+.|-+
T Consensus 121 -l~~---~n~~~li~~~DvViD~tD-N~~tR~lindac~~~~~PlV~ga~~~~~ 169 (392)
T PRK07878 121 -LEP---SNAVDLFAQYDLILDGTD-NFATRYLVNDAAVLAGKPYVWGSIYRFE 169 (392)
T ss_pred -CCH---HHHHHHHCCCCEEEECCC-CHHHHHHHHHHHHHHCCCEEEEEECCCE
T ss_conf -788---898764317768986689-9899999999999969987997605758
No 359
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=94.66 E-value=0.15 Score=30.95 Aligned_cols=99 Identities=12% Similarity=0.170 Sum_probs=53.7
Q ss_pred EEEEEEC-CHHHHHHHHHHHHC-CCEEE-EEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHH
Q ss_conf 0569815-71116889999978-98599-973998999999971221127840328989998605778899997699069
Q gi|254780716|r 5 DIGIIGL-GSMGSNLSLNILDK-GFRLA-VYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDP 81 (475)
Q Consensus 5 ~IGiIGL-G~MG~~mA~nL~~~-G~~V~-vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~ 81 (475)
+||+||- |--|.-|.+-|.++ .+++. +|-...+.-+.+...+..........-+..++. ....+++|+++|++..
T Consensus 1 kVaIvGatGyvG~eli~lL~~hp~~~~~~l~as~~~~G~~i~~~~~~l~~~~~~~~~~~~~~--~~~~Dvvf~a~p~~~s 78 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPHLKGEVVLELEPEDFE--ELAVDIVFLALPHGVS 78 (122)
T ss_pred CEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHCCCCCCCCCCEECCCCCC--CCCCCEEEECCCCHHH
T ss_conf 98998945199999999998589974577774046589757885966457735056533110--0179999993882788
Q ss_pred HHHHHHHHHHCCCCCCEEEECCCCC
Q ss_conf 9999999972078998999679865
Q gi|254780716|r 82 VDQLIDKLKPLLSPEDILLDGGNSH 106 (475)
Q Consensus 82 v~~vi~~l~~~l~~g~iiID~sts~ 106 (475)
.++...+....+.|..|||.|..+
T Consensus 79 -~~~~~~~~~~~~~g~~VIDlSadf 102 (122)
T smart00859 79 -KEIAPLLPKAAEAGVKVIDLSSAF 102 (122)
T ss_pred -HHHHHHHHHHHHCCCEEEECCHHH
T ss_conf -999998898875698798684775
No 360
>PRK06484 short chain dehydrogenase; Validated
Probab=94.66 E-value=0.41 Score=27.74 Aligned_cols=78 Identities=15% Similarity=0.304 Sum_probs=54.8
Q ss_pred EEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 5698--15711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 6 IGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 6 IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
+.+| |-+-+|..+|+.|++.|.+|.+.||+.+..++..++... .. ..+-.-|.+.+.++
T Consensus 7 valVTGas~GIG~aiA~~la~~Ga~V~~~dr~~~~~~~~~~~~g~---~~----------------~~~~~Dvsd~~~v~ 67 (530)
T PRK06484 7 VVLVTGAAGGIGRACCQRFARAGDRVVMADRDLAACTEEAERLGS---RH----------------VALQLDVSDEAQVE 67 (530)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCC---CC----------------EEEEEECCCHHHHH
T ss_conf 999978366899999999998799999996888999999997099---71----------------79998489999999
Q ss_pred HHHHHHHHCCCCCCEEEEC
Q ss_conf 9999997207899899967
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDG 102 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~ 102 (475)
++++.+.....+=|++|..
T Consensus 68 ~~v~~~~~~~G~iDiLVNN 86 (530)
T PRK06484 68 HAMDGLLQQFGRIDVLVNN 86 (530)
T ss_pred HHHHHHHHHCCCCCEEEEC
T ss_conf 9999999972999899989
No 361
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=94.66 E-value=0.41 Score=27.74 Aligned_cols=81 Identities=7% Similarity=0.195 Sum_probs=53.3
Q ss_pred EEEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 05698--1571116889999978985999739989999999712211278403289899986057788999976990699
Q gi|254780716|r 5 DIGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 5 ~IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
++.+| |-+-+|..+|+.|++.|.+|.+.||+.. .++..++.......+. .+-.-|.+.+.+
T Consensus 9 KvalITGas~GIG~aiA~~la~~Ga~V~~~~r~~~-~~~~~~~~~~~~~~~~----------------~~~~Dv~~~~~~ 71 (260)
T PRK12823 9 KVAVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELVAAGGEAL----------------ALTADLETYAGA 71 (260)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH-HHHHHHHHHHCCCCEE----------------EEECCCCCHHHH
T ss_conf 98999488678999999999987999999969468-9999999985499489----------------998126885899
Q ss_pred HHHHHHHHHCCCCCCEEEEC
Q ss_conf 99999997207899899967
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDG 102 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~ 102 (475)
++.++.+...+.+=|++|..
T Consensus 72 ~~~~~~~~~~~G~iDiLVnn 91 (260)
T PRK12823 72 QAVMAAAVEAFGRIDVLINN 91 (260)
T ss_pred HHHHHHHHHHHCCCCEEEEC
T ss_conf 99999999983998799977
No 362
>PRK06484 short chain dehydrogenase; Validated
Probab=94.66 E-value=0.41 Score=27.73 Aligned_cols=13 Identities=31% Similarity=0.396 Sum_probs=5.7
Q ss_pred HHHHHHHHHCCCC
Q ss_conf 9999999847994
Q gi|254780716|r 111 QIRSLQLSEKGIY 123 (475)
Q Consensus 111 ~~~~~~l~~kgi~ 123 (475)
+.++.++.++||+
T Consensus 163 kslA~Ela~~gIR 175 (530)
T PRK06484 163 RSLACELAPKGIR 175 (530)
T ss_pred HHHHHHHHHCCEE
T ss_conf 9999986340949
No 363
>PRK06114 short chain dehydrogenase; Provisional
Probab=94.65 E-value=0.41 Score=27.72 Aligned_cols=82 Identities=11% Similarity=0.242 Sum_probs=54.5
Q ss_pred EEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHH-HHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 5698--1571116889999978985999739989-999999712211278403289899986057788999976990699
Q gi|254780716|r 6 IGII--GLGSMGSNLSLNILDKGFRLAVYNKDFE-LTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 6 IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~-~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
+.+| |-+-+|..+|+.|++.|.+|.+.|++.+ ..++..++....+..+. .+-.-|.+.+.+
T Consensus 18 valVTGa~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~----------------~~~~Dvt~~~~v 81 (262)
T PRK06114 18 VAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAI----------------QIAADVTSKSDL 81 (262)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCEE----------------EEECCCCCHHHH
T ss_conf 8999684789999999999987998999958974699999999996599589----------------998168999999
Q ss_pred HHHHHHHHHCCCCCCEEEECC
Q ss_conf 999999972078998999679
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~s 103 (475)
++.++.......+=|++|...
T Consensus 82 ~~~v~~~~~~~G~iDiLVNnA 102 (262)
T PRK06114 82 AAAVARTEAELGALTLAVNAA 102 (262)
T ss_pred HHHHHHHHHHCCCCCEEEECC
T ss_conf 999999999819998999899
No 364
>PRK12827 short chain dehydrogenase; Provisional
Probab=94.63 E-value=0.33 Score=28.50 Aligned_cols=86 Identities=16% Similarity=0.162 Sum_probs=54.5
Q ss_pred EEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 5698--15711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 6 IGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 6 IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
+.+| |-+-+|.++|+.|++.|.+|.+.|++.++.++..++... ++-..-.+...+-.-|.+.+.++
T Consensus 8 valVTGas~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~------------~~~~~g~~~~~~~~Dv~~~~~v~ 75 (251)
T PRK12827 8 RVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEAEAVAA------------LIEAAGGKALGLAFDVRDFAATR 75 (251)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHH------------HHHHCCCEEEEEEECCCCHHHHH
T ss_conf 899968255899999999998799899984888532899999999------------99964984999990389999999
Q ss_pred HHHHHHHHCCCCCCEEEECC
Q ss_conf 99999972078998999679
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~s 103 (475)
++++.+.....+=|++|...
T Consensus 76 ~~v~~~~~~~G~iDiLVNnA 95 (251)
T PRK12827 76 AALDAGVEEFGRLDILVNNA 95 (251)
T ss_pred HHHHHHHHHCCCCCEEEECC
T ss_conf 99999999839997999899
No 365
>PRK07236 hypothetical protein; Provisional
Probab=94.59 E-value=0.05 Score=34.49 Aligned_cols=37 Identities=14% Similarity=0.185 Sum_probs=34.4
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHH
Q ss_conf 9988056981571116889999978985999739989
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFE 37 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~ 37 (475)
|++.+|-|||-|.=|..+|.-|.++|++|.+|+|+++
T Consensus 4 ~~~~kV~IVGaGiaGL~~A~~L~~~G~~v~v~Er~~~ 40 (386)
T PRK07236 4 MSKPRAVVVGGSLGGLFAANLLRRAGWDVDVFERSPT 40 (386)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEECCCCC
T ss_conf 9999689999368999999999858999899868998
No 366
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=94.59 E-value=0.43 Score=27.62 Aligned_cols=37 Identities=16% Similarity=0.219 Sum_probs=14.8
Q ss_pred EEEEECCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHH
Q ss_conf 5698157111688999997898-599973998999999
Q gi|254780716|r 6 IGIIGLGSMGSNLSLNILDKGF-RLAVYNKDFELTDVF 42 (475)
Q Consensus 6 IGiIGLG~MG~~mA~nL~~~G~-~V~vydr~~~~~~~l 42 (475)
|.++|.|-+|...+.-+...|- .|.+-|++++|.+..
T Consensus 180 VlV~GaG~iGl~a~~~ak~~Ga~~Vi~~d~~~~rl~~A 217 (358)
T TIGR03451 180 VAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWA 217 (358)
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHH
T ss_conf 99967376999999999983991899991988999999
No 367
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=94.53 E-value=0.18 Score=30.32 Aligned_cols=11 Identities=36% Similarity=0.534 Sum_probs=4.1
Q ss_pred EEEECCCCHHH
Q ss_conf 89856987467
Q gi|254780716|r 171 CALLGPDGSGH 181 (475)
Q Consensus 171 v~y~G~~GsGh 181 (475)
+.-+|.+|++.
T Consensus 125 ~lilGaGGaar 135 (272)
T PRK12550 125 VALRGSGGMAK 135 (272)
T ss_pred EEEECCCHHHH
T ss_conf 89973623389
No 368
>PRK05993 short chain dehydrogenase; Provisional
Probab=94.52 E-value=0.44 Score=27.51 Aligned_cols=80 Identities=18% Similarity=0.285 Sum_probs=56.1
Q ss_pred CCCCEEEEEECC-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCH
Q ss_conf 998805698157-1116889999978985999739989999999712211278403289899986057788999976990
Q gi|254780716|r 1 MKQADIGIIGLG-SMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDG 79 (475)
Q Consensus 1 M~k~~IGiIGLG-~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g 79 (475)
|+| .|=+-|-+ -+|..+|+.|+++|++|....|+.+..+.+.+++ + ..+.+-|.+.
T Consensus 3 m~K-~vlITGassGIG~alA~~la~~G~~V~~~~R~~~~l~~l~~~~------~----------------~~~~~Dv~d~ 59 (277)
T PRK05993 3 MKR-SILITGCSSGIGAYCAHALQKRGWRVFATCRKPEDIAALEAEG------L----------------EAFYLDYAEP 59 (277)
T ss_pred CCC-EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCC------C----------------EEEEEECCCH
T ss_conf 986-8999256869999999999987999999979999999998489------8----------------1999726677
Q ss_pred HHHHHHHHHHHHCC-CCCCEEEECC
Q ss_conf 69999999997207-8998999679
Q gi|254780716|r 80 DPVDQLIDKLKPLL-SPEDILLDGG 103 (475)
Q Consensus 80 ~~v~~vi~~l~~~l-~~g~iiID~s 103 (475)
+.+++.++.++... .+-|++|..+
T Consensus 60 ~~v~~~v~~~~~~~~g~id~lvNnA 84 (277)
T PRK05993 60 ESIAALVAQVLELSGGKLDALFNNG 84 (277)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEECC
T ss_conf 9999999999998089706999666
No 369
>PRK06057 short chain dehydrogenase; Provisional
Probab=94.48 E-value=0.45 Score=27.45 Aligned_cols=78 Identities=22% Similarity=0.330 Sum_probs=56.8
Q ss_pred EEEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 05698--1571116889999978985999739989999999712211278403289899986057788999976990699
Q gi|254780716|r 5 DIGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 5 ~IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
++.+| |-+-+|..+|+.|++.|.+|.+.|+++++.+++.++... . .+-.-|.+.+.+
T Consensus 8 KvalVTGas~GIG~aia~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~-----~----------------~~~~Dv~~~~~v 66 (255)
T PRK06057 8 RVAVITGGASGIGLATARRMRAEGATVVVGDIDPEAGKAAADELGG-----L----------------FVQVDVTDEDAV 66 (255)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCC-----E----------------EEEEECCCHHHH
T ss_conf 9899968488899999999998699899996988999999986499-----7----------------999816999999
Q ss_pred HHHHHHHHHCCCCCCEEEECC
Q ss_conf 999999972078998999679
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~s 103 (475)
++.++........=|++|...
T Consensus 67 ~~~v~~~~~~~G~iDiLVNnA 87 (255)
T PRK06057 67 NALFDTAAETYGSVDIAFNNA 87 (255)
T ss_pred HHHHHHHHHHHCCCCEEEECC
T ss_conf 999999999819987899888
No 370
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=94.41 E-value=0.13 Score=31.38 Aligned_cols=77 Identities=17% Similarity=0.335 Sum_probs=55.1
Q ss_pred CEEEEEECCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 8056981571-116889999978985999739989999999712211278403289899986057788999976990699
Q gi|254780716|r 4 ADIGIIGLGS-MGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 4 ~~IGiIGLG~-MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
.++-+||-++ .|.|+|.-|..+|..|.+++.... ++.+.+ ...++|+..+....-+
T Consensus 45 k~vvViGrS~iVG~Pla~lL~~~~atVt~chs~T~--------------------~l~~~~---~~ADIvIsA~G~~~li 101 (168)
T cd01080 45 KKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTK--------------------NLKEHT---KQADIVIVAVGKPGLV 101 (168)
T ss_pred CEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCC--------------------CHHHHH---HHCCEEEEECCCCCCC
T ss_conf 56999878730089999999848997999768988--------------------979974---1045355415876637
Q ss_pred HHHHHHHHHCCCCCCEEEECCCCCHHH
Q ss_conf 999999972078998999679865789
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDGGNSHFCD 109 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~sts~~~~ 109 (475)
. ...+++|.++||.|.+..++
T Consensus 102 ~------~~~vk~gavvIDvGin~~~~ 122 (168)
T cd01080 102 K------GDMVKPGAVVIDVGINRVPD 122 (168)
T ss_pred C------HHHCCCCCEEEECCCCCCCC
T ss_conf 8------99958998899666542334
No 371
>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed
Probab=94.38 E-value=0.092 Score=32.55 Aligned_cols=68 Identities=22% Similarity=0.294 Sum_probs=42.8
Q ss_pred CCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEE
Q ss_conf 880569815711168899999789859997399899999997122112784032898999860577889999
Q gi|254780716|r 3 QADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILM 74 (475)
Q Consensus 3 k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil 74 (475)
.+.||+||=|..|+-||.--.+-|++|.++|.+++.-..-+... .......-.+.+.+|++.++ +|-.
T Consensus 7 ~~tIGIlGgGQLgrMla~aA~~lG~~v~vldp~~~~PA~~va~~-~~~~~~~D~~al~~fa~~~D---viT~ 74 (377)
T PRK06019 7 GKTIGIIGGGQLGRMLALAAAPLGYKVIVLDPDADCPAAQVADR-VIVADYDDVAALRELAEQCD---VITY 74 (377)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHCCE-EEECCCCCHHHHHHHHHCCC---EEEE
T ss_conf 99999987868999999999978998999848984984783784-89868898999999984599---9997
No 372
>PRK06101 short chain dehydrogenase; Provisional
Probab=94.34 E-value=0.48 Score=27.24 Aligned_cols=41 Identities=17% Similarity=0.374 Sum_probs=34.2
Q ss_pred EEEEEC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHC
Q ss_conf 569815-71116889999978985999739989999999712
Q gi|254780716|r 6 IGIIGL-GSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKI 46 (475)
Q Consensus 6 IGiIGL-G~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~ 46 (475)
|=+.|- +-+|..+|+.|+++|++|.+.+|+.++.+++.+++
T Consensus 4 vlITGassGIG~a~A~~la~~G~~Vi~~~R~~~~l~~~~~~~ 45 (241)
T PRK06101 4 VLITGATSGIGKQLALDYAKAGWKVIACGRNEAVLDELHDQS 45 (241)
T ss_pred EEEECCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHC
T ss_conf 999224049999999999987998999989999999999732
No 373
>pfam02882 THF_DHG_CYH_C Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain.
Probab=94.29 E-value=0.18 Score=30.41 Aligned_cols=75 Identities=16% Similarity=0.357 Sum_probs=54.5
Q ss_pred CEEEEEECCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 8056981571-116889999978985999739989999999712211278403289899986057788999976990699
Q gi|254780716|r 4 ADIGIIGLGS-MGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 4 ~~IGiIGLG~-MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
.++-+||-+. .|.|||.=|.++|..|.+++.... ++.+.+. ..++|+..+....-+
T Consensus 37 k~vvViGrS~iVG~Pla~lL~~~~atVtichs~T~--------------------nl~~~~~---~ADIvI~A~G~p~~i 93 (159)
T pfam02882 37 KNVVVIGRSNIVGKPLALLLLNANATVTVCHSKTK--------------------DLAEITR---EADIVVVAVGKPGLI 93 (159)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCC--------------------CHHHHHH---CCCEEEEECCCCCCC
T ss_conf 66999888731489999999877998999818999--------------------9789630---034442315885505
Q ss_pred HHHHHHHHHCCCCCCEEEECCCCCH
Q ss_conf 9999999720789989996798657
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDGGNSHF 107 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~sts~~ 107 (475)
+. ..+++|.++||.|.+..
T Consensus 94 ~~------~~ik~gavvIDvGi~~~ 112 (159)
T pfam02882 94 KA------DWVKPGAVVIDVGINRV 112 (159)
T ss_pred CH------HHCCCCCEEEEECCCCC
T ss_conf 69------88589988998022065
No 374
>PRK09135 pteridine reductase; Provisional
Probab=94.29 E-value=0.49 Score=27.16 Aligned_cols=85 Identities=19% Similarity=0.385 Sum_probs=56.6
Q ss_pred EEEEE--ECCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHH
Q ss_conf 05698--1571116889999978985999-73998999999971221127840328989998605778899997699069
Q gi|254780716|r 5 DIGII--GLGSMGSNLSLNILDKGFRLAV-YNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDP 81 (475)
Q Consensus 5 ~IGiI--GLG~MG~~mA~nL~~~G~~V~v-ydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~ 81 (475)
++.+| |-+-+|..+|+.|++.|.+|.+ |+++.+..+.+.++...... .+...+-.-|.+.+.
T Consensus 7 KvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~l~~~~~---------------~~~~~~~~Dv~~~~~ 71 (249)
T PRK09135 7 KVALITGGARRIGAAIARTLHAAGYRVAVHYHRSAAEADALAAELNRLRP---------------GSAAALQADLLDPDA 71 (249)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCC---------------CCEEEEECCCCCHHH
T ss_conf 88999688758999999999987998999818987999999999985059---------------818999816999999
Q ss_pred HHHHHHHHHHCCCCCCEEEECCC
Q ss_conf 99999999720789989996798
Q gi|254780716|r 82 VDQLIDKLKPLLSPEDILLDGGN 104 (475)
Q Consensus 82 v~~vi~~l~~~l~~g~iiID~st 104 (475)
++++++.+.....+=|++|...-
T Consensus 72 v~~~~~~~~~~~G~iDiLVNNAg 94 (249)
T PRK09135 72 LEQLVAAAVAAFGRLDALVNNAS 94 (249)
T ss_pred HHHHHHHHHHHCCCCCEEEECCC
T ss_conf 99999999998399989998998
No 375
>PRK06483 short chain dehydrogenase; Provisional
Probab=94.27 E-value=0.5 Score=27.14 Aligned_cols=80 Identities=20% Similarity=0.219 Sum_probs=53.7
Q ss_pred CCCCEEEEEECC-HHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCC
Q ss_conf 998805698157-111688999997898599973998999-999971221127840328989998605778899997699
Q gi|254780716|r 1 MKQADIGIIGLG-SMGSNLSLNILDKGFRLAVYNKDFELT-DVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTD 78 (475)
Q Consensus 1 M~k~~IGiIGLG-~MG~~mA~nL~~~G~~V~vydr~~~~~-~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~ 78 (475)
|+| .|=+.|-+ -+|..+|+.|++.|++|.+.+|+.+.. +++.+.+ .. .+-.-|.+
T Consensus 1 M~k-tVlVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~l~~~~------~~----------------~~~~Dv~~ 57 (236)
T PRK06483 1 MSA-PILITGAGQRIGLALAKHLLAQGQPVIVSYRSHYPAIDELRQAG------AT----------------CIQADFST 57 (236)
T ss_pred CCC-EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCC------CE----------------EEEECCCC
T ss_conf 998-79997899889999999999889989999598479999998569------98----------------99922799
Q ss_pred HHHHHHHHHHHHHCCCCCCEEEECC
Q ss_conf 0699999999972078998999679
Q gi|254780716|r 79 GDPVDQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 79 g~~v~~vi~~l~~~l~~g~iiID~s 103 (475)
.+.++++++.+......=|++|...
T Consensus 58 ~~~v~~~~~~~~~~~g~id~lVnNA 82 (236)
T PRK06483 58 NAGIMAFIDELKQHTDGLRAIIHNA 82 (236)
T ss_pred HHHHHHHHHHHHHHHCCCCEEEECC
T ss_conf 9999999999999839975999777
No 376
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=94.27 E-value=0.38 Score=28.03 Aligned_cols=71 Identities=17% Similarity=0.213 Sum_probs=51.6
Q ss_pred EEEEEEC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCH
Q ss_conf 0569815-71116889999978985999739989999999712211278403289899986057788999976990
Q gi|254780716|r 5 DIGIIGL-GSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDG 79 (475)
Q Consensus 5 ~IGiIGL-G~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g 79 (475)
+|++||- |.-|+.++.-..+.|++|+..-|+++|...+.... ... .-..++..+.+.+..-+.||.....+
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~~-i~q---~Difd~~~~a~~l~g~DaVIsA~~~~ 73 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQGVT-ILQ---KDIFDLTSLASDLAGHDAVISAFGAG 73 (211)
T ss_pred EEEEEECCCHHHHHHHHHHHHCCCEEEEEEECHHHCCCCCCCE-EEC---CCCCCHHHHHHHHCCCCEEEEECCCC
T ss_conf 0789953745679999999867980489980767665223530-200---02227456676635876699721578
No 377
>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional
Probab=94.26 E-value=0.5 Score=27.12 Aligned_cols=140 Identities=16% Similarity=0.185 Sum_probs=76.3
Q ss_pred CCCCEEEEEEC-CHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCC
Q ss_conf 99880569815-711168899999789-8599973998999999971221127840328989998605778899997699
Q gi|254780716|r 1 MKQADIGIIGL-GSMGSNLSLNILDKG-FRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTD 78 (475)
Q Consensus 1 M~k~~IGiIGL-G~MG~~mA~nL~~~G-~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~ 78 (475)
|+. +|+++|- |--|.-+.+-|.++- +++ ..++.++.++. . --.|+ ++..+++|+|+|+
T Consensus 1 M~~-kV~I~GasGytG~EL~rlL~~Hp~vel--~~i~~~~~k~~---------~-----~~~~~---~~~~DvvFlalPh 60 (314)
T PRK11863 1 MKP-KVFIDGEAGTTGLQIRERLAGRSDIEL--LSIPEAKRKDP---------A-----ARREL---LNAADIAILCLPD 60 (314)
T ss_pred CCC-EEEEECCCCCHHHHHHHHHHCCCCEEE--EEECCCCCCCH---------H-----HHHHH---HHCCCEEEECCCC
T ss_conf 982-699989988569999999975998299--99671125575---------5-----67877---5069999999997
Q ss_pred HHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCC------CCCCC-EE-EEECCHH-
Q ss_conf 069999999997207899899967986578999999999847994306754676000------35684-37-8845489-
Q gi|254780716|r 79 GDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGVKG------ARSGA-SL-MVGGNEK- 149 (475)
Q Consensus 79 g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~~g------A~~G~-sl-MvGG~~~- 149 (475)
+...+. +..+ ++.|..|||.|.-+.- .. + + |-|=|+= ..++. -+ -+|+-..
T Consensus 61 ~~s~~~-v~~~---~~~g~kVIDLSaDfRl---------~~-~--w----vYGlPEl~~~~r~~I~~a~~IAnPGCyaTa 120 (314)
T PRK11863 61 DAAREA-VALI---DNPATRVIDASTAHRT---------AP-G--W----VYGFPELAPGQRERIAAARRVANPGCYPTG 120 (314)
T ss_pred HHHHHH-HHHH---HHCCCEEEECCCCCCC---------CC-C--C----EEECCCCCHHHHHHHHHCCEEECCCCHHHH
T ss_conf 789999-9988---6279889989854457---------99-9--7----733650687789998629863279828999
Q ss_pred HHHHHHHHHHHHHCCCCCC-C--EEEEECCCCHHHH
Q ss_conf 9988899999875015678-6--1898569874678
Q gi|254780716|r 150 AYNRVENILLSISAKYQNS-P--CCALLGPDGSGHF 182 (475)
Q Consensus 150 ~~~~~~piL~~iaak~~~~-~--cv~y~G~~GsGh~ 182 (475)
+.-.+.|+++.=- .+.. + +-.-.|-+|+|.-
T Consensus 121 ~iL~L~PL~~~gl--i~~~~~i~i~a~SG~SGAGk~ 154 (314)
T PRK11863 121 AIALLRPLVDAGL--LPADYPVSINAVSGYSGGGKA 154 (314)
T ss_pred HHHHHHHHHHCCC--CCCCCCEEEEEECCCCCCCCC
T ss_conf 9999999997688--788884699841025667766
No 378
>PRK12937 short chain dehydrogenase; Provisional
Probab=94.24 E-value=0.5 Score=27.10 Aligned_cols=83 Identities=19% Similarity=0.414 Sum_probs=55.1
Q ss_pred EEEEE--ECCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHH
Q ss_conf 05698--1571116889999978985999-73998999999971221127840328989998605778899997699069
Q gi|254780716|r 5 DIGII--GLGSMGSNLSLNILDKGFRLAV-YNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDP 81 (475)
Q Consensus 5 ~IGiI--GLG~MG~~mA~nL~~~G~~V~v-ydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~ 81 (475)
++.+| |-+-+|..+|+.|++.|.+|.+ |+++.+..+++.++......++ ..+-.-|.+.+.
T Consensus 6 K~alVTGgs~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~Dv~~~~~ 69 (245)
T PRK12937 6 KVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAMADELVEEIEAAGGRA----------------IAVQADVADAAA 69 (245)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCE----------------EEEECCCCCHHH
T ss_conf 8899948577899999999998799999976998689999999999659958----------------999837899999
Q ss_pred HHHHHHHHHHCCCCCCEEEECC
Q ss_conf 9999999972078998999679
Q gi|254780716|r 82 VDQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 82 v~~vi~~l~~~l~~g~iiID~s 103 (475)
+++.++.+......=|++|...
T Consensus 70 ~~~~v~~~~~~~g~iDilVnNA 91 (245)
T PRK12937 70 VDRLFEAAETAFGRIDVLVNSA 91 (245)
T ss_pred HHHHHHHHHHHHCCCCEEEEEC
T ss_conf 9999999999819988999805
No 379
>TIGR01724 hmd_rel coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase-related protein; InterPro: IPR010063 This entry identifies a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase, (IPR010062 from INTERPRO). All members are restricted to archaeal methanogens and their function is unknown..
Probab=94.20 E-value=0.44 Score=27.52 Aligned_cols=152 Identities=13% Similarity=0.148 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCC
Q ss_conf 11688999997898599973998999999971221127840328989998605778899997699069999999997207
Q gi|254780716|r 14 MGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQLIDKLKPLL 93 (475)
Q Consensus 14 MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi~~l~~~l 93 (475)
-|..||..++..|++|..-..+++-.++-.=. ..+..+++...+-.|.+ +...+-++.-|-|+.+-.+...+++.+
T Consensus 31 GG~~ma~efa~aGhdv~l~eP~~~~~~d~~W~-~ve~aGv~v~~~d~eaa---~~~e~~vlftPfG~~t~~ia~~i~~~~ 106 (341)
T TIGR01724 31 GGSRMAIEFAKAGHDVVLAEPNREVLSDDLWK-KVEDAGVKVVSDDVEAA---KHGEIHVLFTPFGKATLSIAKTIIEHV 106 (341)
T ss_pred CCHHHHHHHHHCCCCEEEECCCHHHHHHHHHH-HHHHCCCEEEEHHHHHH---CCCCEEEEECCCCHHHHHHHHHHHHHC
T ss_conf 60488998874287068607761231146777-78751664530135433---017557886353178999999999746
Q ss_pred CCCCEEEECCCCCHHHHHHH-HH--HHHHC--CCCEE-CCCCCCCCCCCCCCCEEEEECC---------HHHHHHHHHHH
Q ss_conf 89989996798657899999-99--99847--99430-6754676000356843788454---------89998889999
Q gi|254780716|r 94 SPEDILLDGGNSHFCDTQIR-SL--QLSEK--GIYFI-GIGVSGGVKGARSGASLMVGGN---------EKAYNRVENIL 158 (475)
Q Consensus 94 ~~g~iiID~sts~~~~t~~~-~~--~l~~k--gi~fi-d~pVSGG~~gA~~G~slMvGG~---------~~~~~~~~piL 158 (475)
.++.+|.++.|..+.---+. .. +++.+ |+.-+ -++|-|+|... -..+||. ++-.+++-.+.
T Consensus 107 Pe~~~i~ntCt~~~~vly~~le~~l~~~r~dvG~ssmhP~~vPGtP~~~----~y~i~G~~~~~~~~at~~q~~~~~el~ 182 (341)
T TIGR01724 107 PENAVICNTCTVSPVVLYYSLEKILRLKRKDVGISSMHPAAVPGTPQHG----HYVIGGKATEGKELATEEQIKKLVELA 182 (341)
T ss_pred CCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC----EEEEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf 8653662024333368888878887432210320013566788988765----267505420012212589999999999
Q ss_pred HHHHCCCCCCCEEEEECCCCHH
Q ss_conf 9875015678618985698746
Q gi|254780716|r 159 LSISAKYQNSPCCALLGPDGSG 180 (475)
Q Consensus 159 ~~iaak~~~~~cv~y~G~~GsG 180 (475)
+..+. ..|+-|.---
T Consensus 183 ~s~Gk-------~~y~~Padv~ 197 (341)
T TIGR01724 183 KSVGK-------KAYVVPADVS 197 (341)
T ss_pred HHCCC-------CCEECCCHHH
T ss_conf 84187-------4301032036
No 380
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=94.20 E-value=0.51 Score=27.03 Aligned_cols=19 Identities=16% Similarity=0.088 Sum_probs=9.7
Q ss_pred CCCEECCCHHHHHHHCCCC
Q ss_conf 7840328989998605778
Q gi|254780716|r 51 QKVIVTKNLEQMVEAVCKP 69 (475)
Q Consensus 51 ~~~~~~~s~~e~v~~l~~p 69 (475)
-.+.+++.-.+.++.+..-
T Consensus 24 ~~V~g~D~d~~~i~~l~~g 42 (411)
T TIGR03026 24 HEVTGVDIDQEKVDKLNKG 42 (411)
T ss_pred CCEEEEECCHHHHHHHHCC
T ss_conf 9489998999999999779
No 381
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=94.15 E-value=0.53 Score=26.97 Aligned_cols=82 Identities=16% Similarity=0.253 Sum_probs=52.9
Q ss_pred EEEE--ECCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 5698--1571116889999978985999-739989999999712211278403289899986057788999976990699
Q gi|254780716|r 6 IGII--GLGSMGSNLSLNILDKGFRLAV-YNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 6 IGiI--GLG~MG~~mA~nL~~~G~~V~v-ydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
+.+| |-+-+|..+|+.|++.|.+|.+ |+++.+..++..++......... .+-.-|.+.+.+
T Consensus 9 valVTGa~~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~----------------~~~~Dv~~~~~v 72 (261)
T PRK08936 9 VVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDESEANDVAEEIKKVGGEAI----------------AVKGDVTVESDV 72 (261)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEE----------------EEECCCCCHHHH
T ss_conf 8999684778999999999987999999728987899999999996599389----------------998279999999
Q ss_pred HHHHHHHHHCCCCCCEEEECC
Q ss_conf 999999972078998999679
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~s 103 (475)
++.++.......+=|++|...
T Consensus 73 ~~~v~~~~~~~G~iDiLVNNA 93 (261)
T PRK08936 73 VNLIQSAVKEFGTLDVMINNA 93 (261)
T ss_pred HHHHHHHHHHHCCCCEEEECC
T ss_conf 999999999829988999899
No 382
>PRK00711 D-amino acid dehydrogenase small subunit; Validated
Probab=94.11 E-value=0.078 Score=33.07 Aligned_cols=32 Identities=16% Similarity=0.366 Sum_probs=29.8
Q ss_pred EEEEEECCHHHHHHHHHHHHCCCEEEEEECCH
Q ss_conf 05698157111688999997898599973998
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGFRLAVYNKDF 36 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~ 36 (475)
+|-|||-|.+|...|.+|+++|++|.|.||..
T Consensus 2 ~VvIIGaGi~G~stA~~La~~G~~V~vler~~ 33 (416)
T PRK00711 2 RVVVLGSGVVGVTSAWYLARAGHEVTVIDRQP 33 (416)
T ss_pred EEEEECCHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 79999944999999999996899689996999
No 383
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase; InterPro: IPR011294 This entry represents a subfamily of the short chain dehydrogenases. Characterised members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polymers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.; GO: 0003858 3-hydroxybutyrate dehydrogenase activity.
Probab=94.11 E-value=0.45 Score=27.49 Aligned_cols=184 Identities=15% Similarity=0.187 Sum_probs=101.4
Q ss_pred HHHHHHHHHHHCCCEEEEEECC--HHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf 1168899999789859997399--89999999712211278403289899986057788999976990699999999972
Q gi|254780716|r 14 MGSNLSLNILDKGFRLAVYNKD--FELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQLIDKLKP 91 (475)
Q Consensus 14 MG~~mA~nL~~~G~~V~vydr~--~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi~~l~~ 91 (475)
.|..||+.|++.|.+|.+-|++ .+..+...+.....+.++.+ +-.=+++.+.+++.++.+..
T Consensus 13 IG~~iA~~LA~aGa~v~~~d~~~~~~~~~~~~~~~~~~G~~v~~----------------~~~D~T~~~e~~~~~~~~~~ 76 (258)
T TIGR01963 13 IGLAIAKALAAAGANVVVNDLGEADEGAEAAAKVATDAGGSVIY----------------LVADVTKEEEIADMIQAVAA 76 (258)
T ss_pred HHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEE----------------EECCCCCHHHHHHHHHHHHH
T ss_conf 78999999987298899846788789999999999961883577----------------51478888999999999999
Q ss_pred CCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCC-EEEEECCHHHHHHHHHHHHHHHCCCCC-CC
Q ss_conf 0789989996798657899999999984799430675467600035684-378845489998889999987501567-86
Q gi|254780716|r 92 LLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGVKGARSGA-SLMVGGNEKAYNRVENILLSISAKYQN-SP 169 (475)
Q Consensus 92 ~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~~gA~~G~-slMvGG~~~~~~~~~piL~~iaak~~~-~~ 169 (475)
....-||+|+ | .||-++. ||==-|.---.-. .+|..+.--+.+.+.|..+. +..| +
T Consensus 77 ~fG~~DiLVN--N---------------AG~QhVa-PiEeFP~~~w~~iiav~LtsaF~t~raAlP~Mk~---~gwGGR- 134 (258)
T TIGR01963 77 EFGGLDILVN--N---------------AGIQHVA-PIEEFPPEKWDRIIAVMLTSAFHTIRAALPHMKK---QGWGGR- 134 (258)
T ss_pred HHCCCCEEEE--C---------------CCEEECC-CCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCC---CCCCCE-
T ss_conf 8568874884--4---------------6401417-6547786678737302168889999750643213---785537-
Q ss_pred EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCC
Q ss_conf 189856987467898877678788899989999999964-2899789999998606884430799999999974056799
Q gi|254780716|r 170 CCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDS-LNKNPLEISHLFSKWDTGKLSSYLIKITAEILSSSDTITG 248 (475)
Q Consensus 170 cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~-~~~~~~~i~~vf~~w~~~~~~syLl~i~~~il~~k~~~~g 248 (475)
|.+++.. ||.+- ..+==+|-=-||+ .||+-- ... |--.++ ||++.+.-=.- .
T Consensus 135 -IiNIAS~----------HGLvA---Sp~KSAYVAAKHG~~GLTKv--~AL-E~A~~g--------iT~NaiCPGYV--~ 187 (258)
T TIGR01963 135 -IINIASV----------HGLVA---SPFKSAYVAAKHGLIGLTKV--LAL-EVAAHG--------ITANAICPGYV--R 187 (258)
T ss_pred -EEEEEEE----------CCCCC---CCCHHHHHHHHHHHHHHHHH--HHH-HCCCCC--------CEEEEECCCCC--C
T ss_conf -9971010----------00003---53213456774302121155--554-204788--------75866728756--7
Q ss_pred CCCHHH-CCCCCCCC
Q ss_conf 952001-02333658
Q gi|254780716|r 249 MPIIDV-ICDKASQK 262 (475)
Q Consensus 249 ~~lid~-i~d~~~~k 262 (475)
.||+++ |.|.|...
T Consensus 188 TPLV~~Qi~DqAk~r 202 (258)
T TIGR01963 188 TPLVEKQIADQAKTR 202 (258)
T ss_pred CHHHHHHHHHHHHHC
T ss_conf 554676589998651
No 384
>TIGR02415 23BDH acetoin reductases; InterPro: IPR014007 One member of this family, as characterised in Klebsiella terrigena , is able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also capable of irreversible reduction of diacetyl with NADH to acetoin. There has been a reuctance to classify the enzyme as either 1.1.1.4 from EC, which is (R,R)-butanediol dehydrogenase, or 1.1.1.5 from EC, which is acetoin dehydrogenase without a specified stereochemistry . Another member of this family, from Corynebacterium glutamicum (Brevibacterium flavum), is called L-2,3-butanediol dehydrogenase . This enzyme is a homotetramer in the family of short chain dehydrogenases (IPR002198 from INTERPRO). .
Probab=94.08 E-value=0.38 Score=28.04 Aligned_cols=74 Identities=20% Similarity=0.284 Sum_probs=47.5
Q ss_pred CHHHHHHHHHHHHCCCEEEEEECC--HHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHH
Q ss_conf 711168899999789859997399--899999997122112784032898999860577889999769906999999999
Q gi|254780716|r 12 GSMGSNLSLNILDKGFRLAVYNKD--FELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQLIDKL 89 (475)
Q Consensus 12 G~MG~~mA~nL~~~G~~V~vydr~--~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi~~l 89 (475)
+=.|..+|.||++.||.|.+.|.+ ++.+.+..++....+.+... +-+=|.+=+.+++.+++-
T Consensus 10 qGIG~gIa~RLa~DGF~vav~D~n~Qe~~A~~t~~~i~~~G~~Ava----------------~~~DV~~k~~~~~~i~~A 73 (258)
T TIGR02415 10 QGIGKGIAERLAKDGFNVAVADLNNQEETAKETAKEINQKGGKAVA----------------YKLDVSDKSQVFEAIDQA 73 (258)
T ss_pred CCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEE----------------EECCCCCHHHHHHHHHHH
T ss_conf 4323899999983461378725666368999999999866973799----------------864734567899999999
Q ss_pred HHCCCCCCEEEE
Q ss_conf 720789989996
Q gi|254780716|r 90 KPLLSPEDILLD 101 (475)
Q Consensus 90 ~~~l~~g~iiID 101 (475)
..-+-.=|++|.
T Consensus 74 ~~~fG~fdV~VN 85 (258)
T TIGR02415 74 VEKFGGFDVMVN 85 (258)
T ss_pred HHHCCCCEEEEE
T ss_conf 997089327865
No 385
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=94.05 E-value=0.55 Score=26.84 Aligned_cols=101 Identities=13% Similarity=0.265 Sum_probs=55.9
Q ss_pred EEEEEEC-CHHHHHHHHHHHHCCC--EEEEEECCHH--HHH----HHHHHCCCCC--CCCEECCCHHHHHHHCCCCCEEE
Q ss_conf 0569815-7111688999997898--5999739989--999----9997122112--78403289899986057788999
Q gi|254780716|r 5 DIGIIGL-GSMGSNLSLNILDKGF--RLAVYNKDFE--LTD----VFIKKISGLS--QKVIVTKNLEQMVEAVCKPRKIL 73 (475)
Q Consensus 5 ~IGiIGL-G~MG~~mA~nL~~~G~--~V~vydr~~~--~~~----~l~~~~~~~~--~~~~~~~s~~e~v~~l~~pr~Ii 73 (475)
+|++||. |..|..+|..|+.++. ++..+|++++ +++ ++.+...... ..+....+.++ ++..++|+
T Consensus 2 KV~IiGAaG~VG~~~a~~l~~~~~~~el~LiD~~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~d~~~----~~daDivV 77 (309)
T cd05294 2 KVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSDLSD----VAGSDIVI 77 (309)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEHHHHCCCCCCCCCCEEEECCCHHH----HCCCCEEE
T ss_conf 89999999769999999998379987599960556434231123554503433688767982798899----68999999
Q ss_pred EECC---------------CHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHH
Q ss_conf 9769---------------90699999999972078998999679865789999
Q gi|254780716|r 74 MMVT---------------DGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQI 112 (475)
Q Consensus 74 l~vp---------------~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~ 112 (475)
+.-. +.+.+.++...+..+- ++.++|-.| +|-|+..
T Consensus 78 itAG~~rk~g~tR~dLl~~Na~I~~~i~~~i~~~~-p~~ivivvt--NPvDv~t 128 (309)
T cd05294 78 ITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFA-PDTKILVVT--NPVDVMT 128 (309)
T ss_pred ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC-CCEEEEECC--CCHHHHH
T ss_conf 87898899599878999989999999998764269-984999768--9657799
No 386
>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]
Probab=93.99 E-value=0.4 Score=27.85 Aligned_cols=75 Identities=16% Similarity=0.339 Sum_probs=39.0
Q ss_pred EEEEEECCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 056981571-1168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 5 DIGIIGLGS-MGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 5 ~IGiIGLG~-MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
++-+||-++ .|.|||.=|+..+.+|.+++... .++.+.+ .+.++++..+--+.-+.
T Consensus 158 ~~vVVGrS~iVGkPla~lL~~~naTVtvcHs~T--------------------~~l~~~~---k~ADIvv~AvG~p~~i~ 214 (283)
T COG0190 158 NVVVVGRSNIVGKPLALLLLNANATVTVCHSRT--------------------KDLASIT---KNADIVVVAVGKPHFIK 214 (283)
T ss_pred EEEEECCCCCCCHHHHHHHHHCCCEEEEECCCC--------------------CCHHHHH---HHCCEEEEECCCCCCCC
T ss_conf 899989987676799999986799899975778--------------------8878986---23899999548756455
Q ss_pred HHHHHHHHCCCCCCEEEECCCCCHH
Q ss_conf 9999997207899899967986578
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDGGNSHFC 108 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~sts~~~ 108 (475)
...+++|.++||.|.+...
T Consensus 215 ------~d~vk~gavVIDVGinrv~ 233 (283)
T COG0190 215 ------ADMVKPGAVVIDVGINRVN 233 (283)
T ss_pred ------CCCCCCCCEEEECCCCCCC
T ss_conf ------1413578789964775404
No 387
>PRK08589 short chain dehydrogenase; Validated
Probab=93.94 E-value=0.57 Score=26.69 Aligned_cols=82 Identities=13% Similarity=0.250 Sum_probs=54.2
Q ss_pred EEEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 05698--1571116889999978985999739989999999712211278403289899986057788999976990699
Q gi|254780716|r 5 DIGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 5 ~IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
++.+| |-+-+|..+|+.|++.|.+|.+.|++. +.++.+++......++ ..+-.-|.+.+.+
T Consensus 7 KvalVTGas~GIG~aiA~~la~~Ga~Vv~~d~~~-~~~~~~~~i~~~g~~~----------------~~~~~Dvsd~~~v 69 (272)
T PRK08589 7 KVAVITGASTGIGQASAIALAQEGAYVLAVDIAE-AVSETVDKIKSNGGKA----------------KAYHVDISDEQQV 69 (272)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH-HHHHHHHHHHHCCCCE----------------EEEEECCCCHHHH
T ss_conf 9899978256999999999998699999983827-8999999999559948----------------9999607999999
Q ss_pred HHHHHHHHHCCCCCCEEEECC
Q ss_conf 999999972078998999679
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~s 103 (475)
++.++.+.....+=||+|...
T Consensus 70 ~~~v~~~~~~~G~iDiLVNNA 90 (272)
T PRK08589 70 KDFASDIKEQFGHIDVLFNNA 90 (272)
T ss_pred HHHHHHHHHHHCCCCEEEECC
T ss_conf 999999999829987899898
No 388
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF; InterPro: IPR012729 Members of the HesA/MoeB/ThiF family of proteins (IPR000594 from INTERPRO) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees. The Escherichia coli ThiF and MoeB proteins are seemingly more closely related than the E. coli ThiF and Campylobacter (for example) ThiF. This entry represents the divergent clade of putative ThiF proteins as found in Campylobacter..
Probab=93.92 E-value=0.37 Score=28.05 Aligned_cols=131 Identities=23% Similarity=0.387 Sum_probs=76.5
Q ss_pred CCCEEEEEECCHHHHHHHHHHHHCCCE---EEEEEC------CH----------HHHHHHHHHCCCCCCCCEEC------
Q ss_conf 988056981571116889999978985---999739------98----------99999997122112784032------
Q gi|254780716|r 2 KQADIGIIGLGSMGSNLSLNILDKGFR---LAVYNK------DF----------ELTDVFIKKISGLSQKVIVT------ 56 (475)
Q Consensus 2 ~k~~IGiIGLG~MG~~mA~nL~~~G~~---V~vydr------~~----------~~~~~l~~~~~~~~~~~~~~------ 56 (475)
.+..|.+-|||=+|+++|.||++.|.. ++=||+ ++ .|++++.+.-. .+-|+
T Consensus 20 ~~a~VAicGlGGLGS~~AinLAR~GigkLiLvDfDvvepsNLnRQqY~~s~~G~~KteAlke~i~----einPy~~ie~~ 95 (200)
T TIGR02354 20 KKASVAICGLGGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKVSDVGKKKTEALKENIS----EINPYVEIEII 95 (200)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEECEECCCCCCHHHHHHHHCCCHHHHHHHHHHH----HHCCCCEEEEE
T ss_conf 05827897016116899999987302202566404323665613257876248621799998786----50884212311
Q ss_pred ------CCHHHHHHHCCCCCEEEEECCCHHHHHHHH-HHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCC
Q ss_conf ------898999860577889999769906999999-9997207899899967986578999999999847994306754
Q gi|254780716|r 57 ------KNLEQMVEAVCKPRKILMMVTDGDPVDQLI-DKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGV 129 (475)
Q Consensus 57 ------~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi-~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pV 129 (475)
++++.|++..| +|+=-- +.+.+.+.+ +.++...+.-.+|.=.|=..|.|+-.+..+=-.+..+.++=+.
T Consensus 96 d~ki~E~N~~~~fkdaD---iv~EAF-Dna~aKam~~n~vl~~ykdk~li~ASGlAGy~D~NsI~trKI~k~FY~cGDg~ 171 (200)
T TIGR02354 96 DEKIDEENLDKLFKDAD---IVCEAF-DNAEAKAMLVNAVLEKYKDKKLIAASGLAGYDDANSIKTRKISKRFYVCGDGK 171 (200)
T ss_pred ECCCCHHHHHHHHHCCC---EEEECC-CCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEECCCCEEEECCC
T ss_conf 02127667987840674---788716-99889999999999767864587602664524211000121146303874472
Q ss_pred CCCCCCCCCCCEEEE
Q ss_conf 676000356843788
Q gi|254780716|r 130 SGGVKGARSGASLMV 144 (475)
Q Consensus 130 SGG~~gA~~G~slMv 144 (475)
+ +|..|..||.
T Consensus 172 ~----~ak~G~gLma 182 (200)
T TIGR02354 172 S----DAKSGRGLMA 182 (200)
T ss_pred C----CCCCCCCCCC
T ss_conf 2----2001631025
No 389
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=93.89 E-value=0.59 Score=26.62 Aligned_cols=172 Identities=17% Similarity=0.206 Sum_probs=93.5
Q ss_pred EEEEEEC-CHHHHHHHHHHHHCC-CE-EEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHH
Q ss_conf 0569815-711168899999789-85-99973998999999971221127840328989998605778899997699069
Q gi|254780716|r 5 DIGIIGL-GSMGSNLSLNILDKG-FR-LAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDP 81 (475)
Q Consensus 5 ~IGiIGL-G~MG~~mA~nL~~~G-~~-V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~ 81 (475)
+|+++|- |+||+.+.+.+.... +. +.+++|.++.. .-.+..+++. +. .+-+|-.
T Consensus 4 ki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~~~---------------~g~d~ge~~g-~~-----~~gv~v~-- 60 (266)
T COG0289 4 KVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPGSLS---------------LGSDAGELAG-LG-----LLGVPVT-- 60 (266)
T ss_pred EEEEECCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCC---------------CCCCHHHHCC-CC-----CCCCEEE--
T ss_conf 69997578727899999985289946999981378422---------------3431123214-46-----5573320--
Q ss_pred HHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHH
Q ss_conf 99999999720789989996798657899999999984799430675467600035684378845489998889999987
Q gi|254780716|r 82 VDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGVKGARSGASLMVGGNEKAYNRVENILLSI 161 (475)
Q Consensus 82 v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~~gA~~G~slMvGG~~~~~~~~~piL~~i 161 (475)
+.+......-|++||.| .|..+....+.+.+.++.. |.|+. |-+++..++++..-+.+
T Consensus 61 -----~~~~~~~~~~DV~IDFT--~P~~~~~~l~~~~~~~~~l----VIGTT-----------Gf~~e~~~~l~~~a~~v 118 (266)
T COG0289 61 -----DDLLLVKADADVLIDFT--TPEATLENLEFALEHGKPL----VIGTT-----------GFTEEQLEKLREAAEKV 118 (266)
T ss_pred -----CCHHHCCCCCCEEEECC--CCHHHHHHHHHHHHCCCCE----EEECC-----------CCCHHHHHHHHHHHHHC
T ss_conf -----63433046898899899--8254699999999769986----99799-----------99989999999998538
Q ss_pred HCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
Q ss_conf 50156786189856987467898877678788899989999999964289978999999860688443079999999997
Q gi|254780716|r 162 SAKYQNSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKNPLEISHLFSKWDTGKLSSYLIKITAEILS 241 (475)
Q Consensus 162 aak~~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~~i~~vf~~w~~~~~~syLl~i~~~il~ 241 (475)
. +.+...-.-|-. -+||+...+-.+|. ++ +.||-+.-.+-++..-+.--|....-|-.
T Consensus 119 ~--------vv~a~NfSiGvn----------ll~~l~~~aak~l~---~~-DiEIiE~HHr~K~DAPSGTAl~lae~ia~ 176 (266)
T COG0289 119 P--------VVIAPNFSLGVN----------LLFKLAEQAAKVLD---DY-DIEIIEAHHRHKKDAPSGTALKLAEAIAE 176 (266)
T ss_pred C--------EEEECCCHHHHH----------HHHHHHHHHHHHCC---CC-CEEEHHHHCCCCCCCCCHHHHHHHHHHHH
T ss_conf 9--------899656407999----------99999999998667---78-87863232366788986789999999998
Q ss_pred HC
Q ss_conf 40
Q gi|254780716|r 242 SS 243 (475)
Q Consensus 242 ~k 243 (475)
.+
T Consensus 177 ~~ 178 (266)
T COG0289 177 AR 178 (266)
T ss_pred HH
T ss_conf 60
No 390
>PRK07041 short chain dehydrogenase; Provisional
Probab=93.87 E-value=0.59 Score=26.60 Aligned_cols=41 Identities=10% Similarity=0.199 Sum_probs=33.2
Q ss_pred EEEEEC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHC
Q ss_conf 569815-71116889999978985999739989999999712
Q gi|254780716|r 6 IGIIGL-GSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKI 46 (475)
Q Consensus 6 IGiIGL-G~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~ 46 (475)
+=+.|- +-+|.++|+.|++.|.+|.+.+|++++.++..++.
T Consensus 10 ~lITGgs~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~ 51 (240)
T PRK07041 10 VLVVGGSSGIGLAAARAFAARGADVTIASRSRERLAAAARAL 51 (240)
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
T ss_conf 999577888999999999987999999959889999999984
No 391
>TIGR03364 HpnW_proposed FAD dependent oxidoreductase TIGR03364. This clade of FAD dependent oxidoreductases (members of the pfam01266 family) is syntenically associated with a family of proposed phosphonatase-like enzymes (TIGR03351) and is also found (less frequently) in association with phosphonate transporter components. A likely role for this enzyme involves the oxidative deamination of an aminophosphonate differring slightly from 2-aminoethylphosphonate, possibly 1-hydroxy-2-aminoethylphosphonate (see the comments for TIGR03351). Many members of the larger FAD dependent oxidoreductase family act as amino acid oxidative deaminases.
Probab=93.82 E-value=0.074 Score=33.25 Aligned_cols=32 Identities=22% Similarity=0.432 Sum_probs=30.1
Q ss_pred EEEEEECCHHHHHHHHHHHHCCCEEEEEECCH
Q ss_conf 05698157111688999997898599973998
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGFRLAVYNKDF 36 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~ 36 (475)
+|-|||-|.||...|.+|++.|.+|.|.|+..
T Consensus 2 Dv~VIGaGi~Gls~A~~La~~G~~V~vle~~~ 33 (365)
T TIGR03364 2 DLIIVGAGILGLAHAYAAARRGLSVTVIERSS 33 (365)
T ss_pred CEEEECCHHHHHHHHHHHHHCCCCEEEECCCC
T ss_conf 29999932999999999997899499998999
No 392
>TIGR01318 gltD_gamma_fam glutamate synthase, small subunit; InterPro: IPR006006 One pathway for the assimilation of ammonia and glutamate biosynthesis involves glutamate synthase (1.4.1.13 from EC) which transfers the amide group of glutamine to 2-oxoglutarate to yield two molecules of glutamate. 2 L-glutamate + NADP^+ = L-glutamine + 2-oxoglutarate + NADPH + H^+. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including Escherichia coli. ; GO: 0016639 oxidoreductase activity acting on the CH-NH2 group of donors NAD or NADP as acceptor, 0006537 glutamate biosynthetic process.
Probab=93.81 E-value=0.082 Score=32.92 Aligned_cols=34 Identities=21% Similarity=0.426 Sum_probs=32.1
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHH
Q ss_conf 8056981571116889999978985999739989
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFE 37 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~ 37 (475)
..|+|||-|-=|.+-|--|.++|.+|.||||.|+
T Consensus 144 ~rVAviGAGPAGLaCAD~L~RaGV~v~VfDRhP~ 177 (480)
T TIGR01318 144 KRVAVIGAGPAGLACADILARAGVQVVVFDRHPE 177 (480)
T ss_pred CEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCC
T ss_conf 2789977886025799987517855999747703
No 393
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=93.75 E-value=0.62 Score=26.45 Aligned_cols=82 Identities=16% Similarity=0.289 Sum_probs=53.4
Q ss_pred EEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 5698--1571116889999978985999739989999999-712211278403289899986057788999976990699
Q gi|254780716|r 6 IGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFI-KKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 6 IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~-~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
+.+| |-+-+|.++|+.|++.|++|.+.+|+.++..+.. +........+ ..+-.-+.+.+.+
T Consensus 7 ~~lITGgs~GIG~aia~~la~~G~~Vii~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~Dlt~~~~v 70 (248)
T PRK05557 7 VALVTGASRGIGRAIAERLAAQGANVVLNYASSEAGAEALVAEIGALGGKA----------------LAVQGDVADAESI 70 (248)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCE----------------EEEEECCCCHHHH
T ss_conf 899948976899999999998799899996985658999999999639958----------------9999038999999
Q ss_pred HHHHHHHHHCCCCCCEEEECC
Q ss_conf 999999972078998999679
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~s 103 (475)
++.++.+.....+=|++|...
T Consensus 71 ~~~~~~~~~~~g~iD~linnA 91 (248)
T PRK05557 71 ERAVDEAKAEFGGVDILVNNA 91 (248)
T ss_pred HHHHHHHHHHCCCCCEEEECC
T ss_conf 999999999829971999899
No 394
>KOG1200 consensus
Probab=93.72 E-value=0.43 Score=27.62 Aligned_cols=35 Identities=20% Similarity=0.304 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCC
Q ss_conf 11168899999789859997399899999997122
Q gi|254780716|r 13 SMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKIS 47 (475)
Q Consensus 13 ~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~ 47 (475)
-.|++++..|+++|++|.|.|++.+.+++......
T Consensus 25 GIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~ 59 (256)
T KOG1200 25 GIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLG 59 (256)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCC
T ss_conf 07799999997469679975032244799986268
No 395
>TIGR00518 alaDH alanine dehydrogenase; InterPro: IPR008141 Alanine dehydrogenases () and pyridine nucleotide transhydrogenase () have been shown to share regions of similarity . Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP^+ to NADPH with the concomitant oxidation of NADH to NAD^+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site.; GO: 0000286 alanine dehydrogenase activity, 0006118 electron transport.
Probab=93.72 E-value=0.34 Score=28.37 Aligned_cols=99 Identities=15% Similarity=0.251 Sum_probs=69.4
Q ss_pred CCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEE--ECCCHH
Q ss_conf 880569815711168899999789859997399899999997122112784032898999860577889999--769906
Q gi|254780716|r 3 QADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILM--MVTDGD 80 (475)
Q Consensus 3 k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil--~vp~g~ 80 (475)
..++-++|-|..|.+-|+--..-|-.|.+.|.+.++...+-+....... .-+.+..++.+.+...+.++- ++|..+
T Consensus 168 ~g~~~~~ggg~~g~~~~~~~~g~g~~~~~~d~n~d~l~~l~~~f~~~~~--~~~~~~~~~~~~~~~~dl~~~~~l~~g~~ 245 (372)
T TIGR00518 168 PGDVTILGGGVVGTNAAKMAVGLGADVTILDLNVDRLRQLDDLFGGRID--TRYSNAYELEDAVPEADLLIGAVLIPGAK 245 (372)
T ss_pred CCCEEEEECCCCCCHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCHH--HHCCCHHHHHHHHHHHHHEEEEEEECCCC
T ss_conf 4526786076112102344313675156762354665554565312011--10145345544332210101211205754
Q ss_pred HHHHHHHHHHHCCCCCCEEEECC
Q ss_conf 99999999972078998999679
Q gi|254780716|r 81 PVDQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 81 ~v~~vi~~l~~~l~~g~iiID~s 103 (475)
+-.-|-+.+...+.||.+++|..
T Consensus 246 ~p~l~~~~~~~~~~pg~~~~d~~ 268 (372)
T TIGR00518 246 APKLVSEELVEQMKPGAVLVDVA 268 (372)
T ss_pred CCHHHHHHHHHHHCCCCEEEEEE
T ss_conf 53022167887517872578653
No 396
>KOG1399 consensus
Probab=93.67 E-value=0.076 Score=33.17 Aligned_cols=37 Identities=24% Similarity=0.536 Sum_probs=33.2
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHH
Q ss_conf 9988056981571116889999978985999739989
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFE 37 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~ 37 (475)
|...++.+||.|.=|.+.|++|.+.|++|.+|.|+.+
T Consensus 4 ~~~~~vaIIGAG~sGL~~ar~l~~~g~~v~vfEr~~~ 40 (448)
T KOG1399 4 MMSKDVAVIGAGPAGLAAARELLREGHEVVVFERTDD 40 (448)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCC
T ss_conf 7778548978566888999999877998369970587
No 397
>PRK11259 solA N-methyltryptophan oxidase; Provisional
Probab=93.62 E-value=0.099 Score=32.31 Aligned_cols=34 Identities=32% Similarity=0.515 Sum_probs=31.3
Q ss_pred CCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCH
Q ss_conf 8805698157111688999997898599973998
Q gi|254780716|r 3 QADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDF 36 (475)
Q Consensus 3 k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~ 36 (475)
+.+|-|||-|.+|...|.+|+++|.+|.+.|+..
T Consensus 3 r~DVvVIGaGi~G~s~A~~La~~G~~V~vle~~~ 36 (377)
T PRK11259 3 RYDVIVIGLGSMGSAAGYYLARAGLRVLGIDRFM 36 (377)
T ss_pred EEEEEEECCCHHHHHHHHHHHHCCCCEEEECCCC
T ss_conf 0489999952999999999997899599992899
No 398
>PRK08849 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
Probab=93.61 E-value=0.12 Score=31.80 Aligned_cols=35 Identities=26% Similarity=0.443 Sum_probs=33.4
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECC
Q ss_conf 99880569815711168899999789859997399
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGFRLAVYNKD 35 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~ 35 (475)
|+|.+|-|||-|.-|..+|.-|++.|++|.++++.
T Consensus 1 M~~~DV~IvGaG~vGl~lAl~La~~G~~V~iiE~~ 35 (384)
T PRK08849 1 MNKYDIAVVGGGMVGAATAIGFAKQGRSVAVIEGF 35 (384)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 98189999992499999999999579959999689
No 399
>PRK08374 homoserine dehydrogenase; Provisional
Probab=93.60 E-value=0.65 Score=26.27 Aligned_cols=142 Identities=14% Similarity=0.191 Sum_probs=69.5
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCC----CEE---EEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEE
Q ss_conf 99880569815711168899999789----859---99739989999999712211278403289899986057788999
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKG----FRL---AVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKIL 73 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G----~~V---~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Ii 73 (475)
|+ -+||++|+|+.|+.+++-|.++. .++ .+-|++......+ .+ ....+......+ +
T Consensus 1 m~-i~I~l~G~G~VG~~~~~~L~~~~~~~g~~l~vv~i~~~~~~~~~~~---------d~---~~~~~~~~~~~~----~ 63 (316)
T PRK08374 1 ME-VKVSLFGFGTVGRALAEILAEKSRVFGVELKVVSITDRSGTVWGDF---------DL---LEAKEVKESTGK----L 63 (316)
T ss_pred CE-EEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCC---------CH---HHHHHHHHCCCC----C
T ss_conf 95-1299993388999999999971887298659999995567634565---------55---665553320254----3
Q ss_pred EECCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEECCHHHHHH
Q ss_conf 97699069999999997207899899967986578999999999847994306754676000356843788454899988
Q gi|254780716|r 74 MMVTDGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGVKGARSGASLMVGGNEKAYNR 153 (475)
Q Consensus 74 l~vp~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~~gA~~G~slMvGG~~~~~~~ 153 (475)
.-.++....+.....++... +.+|+||++++.+ ..+....+-++|.+.+-|-= ++ + ...|++
T Consensus 64 ~~~~~~~~~~~~~~~i~~~~-~~dvvVd~t~~~~--~~~~~~~al~~G~hVVTANK---------~~--l----A~~~~e 125 (316)
T PRK08374 64 SNIGDYEVYNFTPEEIVEEV-DPDIVVDVSSWDE--AHEWYLTALKEGKSVVTSNK---------PP--I----ANHYDE 125 (316)
T ss_pred CCCCCHHHCCCCHHHHHCCC-CCCEEEECCCCHH--HHHHHHHHHHCCCCEECCCH---------HH--H----HHHHHH
T ss_conf 44553012048989983488-9998998799969--99999999988992997886---------99--9----851999
Q ss_pred HHHHHHHHHCCCCCCCEEEEECCCCHHHHH
Q ss_conf 899999875015678618985698746789
Q gi|254780716|r 154 VENILLSISAKYQNSPCCALLGPDGSGHFV 183 (475)
Q Consensus 154 ~~piL~~iaak~~~~~cv~y~G~~GsGh~v 183 (475)
+.. .|.+ ++-.+.|=+..|+|-=+
T Consensus 126 L~~----~A~~--~~~~~~yEasVggGiPi 149 (316)
T PRK08374 126 LLN----EANE--RNLGYFFEATVMAGTPI 149 (316)
T ss_pred HHH----HHHH--CCCEEEEEEEECCCCCC
T ss_conf 999----9997--49849995340002031
No 400
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=93.56 E-value=0.4 Score=27.83 Aligned_cols=94 Identities=13% Similarity=0.230 Sum_probs=60.6
Q ss_pred CEEEEEECC-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 805698157-1116889999978985999739989999999712211278403289899986057788999976990699
Q gi|254780716|r 4 ADIGIIGLG-SMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 4 ~~IGiIGLG-~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
.++-+||-+ .-|.|+|.-|.++|-.|.+++.... ++.+.+ .+.++|+..+....-+
T Consensus 29 k~vvVvGrS~~VG~Pla~lL~~~~atVt~~hs~t~--------------------~l~~~~---~~ADIvI~a~G~p~~i 85 (140)
T cd05212 29 KKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI--------------------QLQSKV---HDADVVVVGSPKPEKV 85 (140)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCC--------------------CHHHHH---HHCCEEEECCCCCCCC
T ss_conf 99999999812499999999978898999469995--------------------989985---2349999816876727
Q ss_pred HHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCC
Q ss_conf 999999972078998999679865789999999998479943067546760
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGV 133 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~ 133 (475)
+. ..+++|.++||.|.+...+ +...++ ..++ .||-||.
T Consensus 86 ~~------~~vk~GavvIDvGi~~~~~-----~~v~~~-a~~i-TPVPGGV 123 (140)
T cd05212 86 PT------EWIKPGATVINCSPTKLSG-----DDVKES-ASLY-VPMTGGV 123 (140)
T ss_pred CH------HHCCCCCEEEEECCCCCCC-----HHHHCE-EEEE-CCCCCCC
T ss_conf 89------7767998899803775677-----214416-5287-7899954
No 401
>pfam00670 AdoHcyase_NAD S-adenosyl-L-homocysteine hydrolase, NAD binding domain.
Probab=93.52 E-value=0.67 Score=26.18 Aligned_cols=91 Identities=15% Similarity=0.141 Sum_probs=62.8
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 80569815711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
.++-++|-|--|+.+|.++...|-.|.|++.+|-+.-+..-.| +. ..+.+|.+.. .+++++.--...
T Consensus 24 k~vvV~GYG~~GkGvA~~~rg~Ga~V~V~EvDPi~aleA~mdG------f~-V~~~~ea~~~---aDi~VTaTG~~~--- 90 (162)
T pfam00670 24 KVAVVCGYGDVGKGCAASLKGQGARVIVTEIDPICALQAAMEG------FQ-VVTLEEVVKK---ADIFVTTTGNKD--- 90 (162)
T ss_pred CEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHCC------CC-CCCHHHHHHC---CCEEEECCCCCC---
T ss_conf 7899967876677799986229998999947930699998649------95-4788898604---999999248977---
Q ss_pred HHH-HHHHHCCCCCCEEEECCCCCHH
Q ss_conf 999-9997207899899967986578
Q gi|254780716|r 84 QLI-DKLKPLLSPEDILLDGGNSHFC 108 (475)
Q Consensus 84 ~vi-~~l~~~l~~g~iiID~sts~~~ 108 (475)
|+ .+-+..++.|.|+-..|..+-+
T Consensus 91 -vi~~eh~~~mKdgaIlaN~GHfd~E 115 (162)
T pfam00670 91 -IITGEHMAKMKNDAIVCNIGHFDNE 115 (162)
T ss_pred -CCCHHHHHHHCCCEEEECCCCCCCE
T ss_conf -4739999984488699877756522
No 402
>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t
Probab=93.50 E-value=0.68 Score=26.15 Aligned_cols=113 Identities=16% Similarity=0.145 Sum_probs=64.2
Q ss_pred CCEEEEEECCHHHHHHHHHHHHCCCEEEE--------EEC---CHHHHHHHHHH---CCCC-C------CCCEECCCHHH
Q ss_conf 88056981571116889999978985999--------739---98999999971---2211-2------78403289899
Q gi|254780716|r 3 QADIGIIGLGSMGSNLSLNILDKGFRLAV--------YNK---DFELTDVFIKK---ISGL-S------QKVIVTKNLEQ 61 (475)
Q Consensus 3 k~~IGiIGLG~MG~~mA~nL~~~G~~V~v--------ydr---~~~~~~~l~~~---~~~~-~------~~~~~~~s~~e 61 (475)
...+.+=|.|+.|+..|+.|.+.|.+|.. ||. +.+....+.+. .... . ...... +.++
T Consensus 38 g~~vaIQGfGnVG~~aA~~l~e~GakvVaVsD~~G~i~~~~Gld~~~l~~l~~~k~~~~~~~~~~~~~~~~~~~~-~~~~ 116 (254)
T cd05313 38 GKRVAISGSGNVAQYAAEKLLELGAKVVTLSDSKGYVYDPDGFTGEKLAELKEIKEVRRGRVSEYAKKYGTAKYF-EGKK 116 (254)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCEEC-CCCC
T ss_conf 999999897799999999999779979999857850887999988999999999974687102444138985663-8975
Q ss_pred HHHHCCCCCEEEEECCCHHHHHHHHH-HHHHCCCCC--CEEEECCCCCHHHHHHHHHHHHHCCCCEE
Q ss_conf 98605778899997699069999999-997207899--89996798657899999999984799430
Q gi|254780716|r 62 MVEAVCKPRKILMMVTDGDPVDQLID-KLKPLLSPE--DILLDGGNSHFCDTQIRSLQLSEKGIYFI 125 (475)
Q Consensus 62 ~v~~l~~pr~Iil~vp~g~~v~~vi~-~l~~~l~~g--~iiID~sts~~~~t~~~~~~l~~kgi~fi 125 (475)
+.+ -.+++.+ |+ +++.+++ +-.+.+... ++|+.+.|. ..|.+..+.|.++||.++
T Consensus 117 ~~~--~~cDIli---Pa--A~en~I~~~nA~~i~a~~ck~IvEgANg--P~T~eAd~iL~~kGI~vi 174 (254)
T cd05313 117 PWE--VPCDIAF---PC--ATQNEVDAEDAKLLVKNGCKYVAEGANM--PCTAEAIEVFRQAGVLFA 174 (254)
T ss_pred HHH--CCCCEEE---EC--CCCCCCCHHHHHHHHHCCCEEEEECCCC--CCCHHHHHHHHHCCCEEE
T ss_conf 133--0476997---43--5466789999999996798299865889--998789999998898896
No 403
>pfam03059 NAS Nicotianamine synthase protein. Nicotianamine synthase EC:2.5.1.43 catalyses the trimerisation of S-adenosylmethionine to yield one molecule of nicotianamine. Nicotianamine has an important role in plant iron uptake mechanisms. Plants adopt two strategies (termed I and II) of iron acquisition. Strategy I is adopted by all higher plants except graminaceous plants, which adopt strategy II. In strategy I plants, the role of nicotianamine is not fully determined: possible roles include the formation of more stable complexes with ferrous than with ferric ion, which might serve as a sensor of the physiological status of iron within a plant, or which might be involved in the transport of iron. In strategy II (graminaceous) plants, nicotianamine is the key intermediate (and nicotianamine synthase the key enzyme) in the synthesis of the mugineic family (the only known family in plants) of phytosiderophores. Phytosiderophores are iron chelators whose secretion by the roots is great
Probab=93.49 E-value=0.68 Score=26.14 Aligned_cols=20 Identities=25% Similarity=0.492 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHCCCCCCEEE
Q ss_conf 99999999972078998999
Q gi|254780716|r 81 PVDQLIDKLKPLLSPEDILL 100 (475)
Q Consensus 81 ~v~~vi~~l~~~l~~g~iiI 100 (475)
.-..+++.|...+.+|..++
T Consensus 209 ~K~~I~~hL~k~m~~Ga~l~ 228 (277)
T pfam03059 209 EKAKVIDHLGKHMAPGALLV 228 (277)
T ss_pred HHHHHHHHHHHHCCCCCEEE
T ss_conf 59999999997458996799
No 404
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=93.48 E-value=0.68 Score=26.13 Aligned_cols=85 Identities=20% Similarity=0.349 Sum_probs=58.4
Q ss_pred CCEEEEEEC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHH
Q ss_conf 880569815-7111688999997898599973998999999971221127840328989998605778899997699069
Q gi|254780716|r 3 QADIGIIGL-GSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDP 81 (475)
Q Consensus 3 k~~IGiIGL-G~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~ 81 (475)
+..+=+-|- +-.|..+|+.|+++|++|..--|+.++.+++.++-.... .+ .++++-.-+.+.+.
T Consensus 6 ~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~-~v--------------~v~vi~~DLs~~~~ 70 (265)
T COG0300 6 GKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT-GV--------------EVEVIPADLSDPEA 70 (265)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHH-CC--------------EEEEEECCCCCHHH
T ss_conf 8679997788648999999999779979999676999999999998730-86--------------27999776788367
Q ss_pred HHHHHHHHHHCCCCCCEEEEC
Q ss_conf 999999997207899899967
Q gi|254780716|r 82 VDQLIDKLKPLLSPEDILLDG 102 (475)
Q Consensus 82 v~~vi~~l~~~l~~g~iiID~ 102 (475)
+..+.+.+.....+=|++|..
T Consensus 71 ~~~l~~~l~~~~~~IdvLVNN 91 (265)
T COG0300 71 LERLEDELKERGGPIDVLVNN 91 (265)
T ss_pred HHHHHHHHHHCCCCCCEEEEC
T ss_conf 999999998248852389977
No 405
>pfam01266 DAO FAD dependent oxidoreductase. This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Probab=93.45 E-value=0.11 Score=31.99 Aligned_cols=32 Identities=19% Similarity=0.440 Sum_probs=29.8
Q ss_pred EEEEEECCHHHHHHHHHHHHCCCEEEEEECCH
Q ss_conf 05698157111688999997898599973998
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGFRLAVYNKDF 36 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~ 36 (475)
+|-|||-|.+|...|.+|++.|++|.++|+..
T Consensus 1 dv~IIGaGi~Gls~A~~La~~G~~V~vie~~~ 32 (309)
T pfam01266 1 DVVVIGGGIVGLSTAYELARRGLSVTLLERGD 32 (309)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEECCCC
T ss_conf 99999927999999999997899599994999
No 406
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=93.44 E-value=0.31 Score=28.65 Aligned_cols=103 Identities=17% Similarity=0.277 Sum_probs=55.7
Q ss_pred EEEEEECCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHH----CCCCCCCCEECCCHHHHHHHCCCCCEEEEEC--
Q ss_conf 05698157111688999997898--599973998999999971----2211278403289899986057788999976--
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGF--RLAVYNKDFELTDVFIKK----ISGLSQKVIVTKNLEQMVEAVCKPRKILMMV-- 76 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~--~V~vydr~~~~~~~l~~~----~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~v-- 76 (475)
+|++||.|..|+.+|..|+..++ ++..||+..++.+-.... ............+ .+ -+.++..++|+++-
T Consensus 2 KV~viGaG~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~-y~~~~~aDiVvitAG~ 79 (313)
T COG0039 2 KVAVIGAGNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GD-YEDLKGADIVVITAGV 79 (313)
T ss_pred EEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHCCHHHCCHHCCCCEEEECC-CC-HHHHCCCCEEEEECCC
T ss_conf 399989874789999999625556659999746665640110253340002676188347-87-0231699899996888
Q ss_pred C-------------CHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHH
Q ss_conf 9-------------90699999999972078998999679865789999
Q gi|254780716|r 77 T-------------DGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQI 112 (475)
Q Consensus 77 p-------------~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~ 112 (475)
| +.+.+.++..++..... +.+++-.| +|-|+.-
T Consensus 80 prKpGmtR~DLl~~Na~I~~~i~~~i~~~~~-d~ivlVvt--NPvD~~t 125 (313)
T COG0039 80 PRKPGMTRLDLLEKNAKIVKDIAKAIAKYAP-DAIVLVVT--NPVDILT 125 (313)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC-CEEEEEEC--CCHHHHH
T ss_conf 8998997799998659999999999996599-72999945--9478899
No 407
>PRK07060 short chain dehydrogenase; Provisional
Probab=93.44 E-value=0.37 Score=28.11 Aligned_cols=38 Identities=11% Similarity=0.197 Sum_probs=32.9
Q ss_pred ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCC
Q ss_conf 15711168899999789859997399899999997122
Q gi|254780716|r 10 GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKIS 47 (475)
Q Consensus 10 GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~ 47 (475)
|-+-+|..+|+.|++.|.+|.+.||+.+..+++.++..
T Consensus 17 ~~~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~ 54 (245)
T PRK07060 17 ASSGIGRACAVALAARGARVVAAARNQADLDRLAGETG 54 (245)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHC
T ss_conf 77689999999999879999999799899999998639
No 408
>PRK02318 mannitol-1-phosphate 5-dehydrogenase; Provisional
Probab=93.31 E-value=0.72 Score=25.95 Aligned_cols=41 Identities=24% Similarity=0.430 Sum_probs=33.3
Q ss_pred EEEEECCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHC
Q ss_conf 569815711168899999-78985999739989999999712
Q gi|254780716|r 6 IGIIGLGSMGSNLSLNIL-DKGFRLAVYNKDFELTDVFIKKI 46 (475)
Q Consensus 6 IGiIGLG~MG~~mA~nL~-~~G~~V~vydr~~~~~~~l~~~~ 46 (475)
+=-.|-|+.|++...-++ +.||+|..-|.+.+-++.+.+++
T Consensus 3 avhFGAGNigRGFI~~ll~~~g~~v~Fvdvn~~li~~Ln~~~ 44 (381)
T PRK02318 3 ALHFGAGNIGRGFIGKLLADNGFEVTFADVNQEIIDALNKRK 44 (381)
T ss_pred EEEECCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCC
T ss_conf 699787422126689999977976999958788999986069
No 409
>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou
Probab=93.30 E-value=0.4 Score=27.86 Aligned_cols=125 Identities=14% Similarity=0.134 Sum_probs=68.8
Q ss_pred EEEEEECCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHCCCCCCCC--EECCCHHHHHHHCCCCCEEEEECCCHHH
Q ss_conf 05698157111688999997898-59997399899999997122112784--0328989998605778899997699069
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGF-RLAVYNKDFELTDVFIKKISGLSQKV--IVTKNLEQMVEAVCKPRKILMMVTDGDP 81 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~-~V~vydr~~~~~~~l~~~~~~~~~~~--~~~~s~~e~v~~l~~pr~Iil~vp~g~~ 81 (475)
+|-+||.|-.|..+++||+..|+ ++.+.|.+.=....|..+.--..+.+ .-+...++.+..+. |.+-+..... ..
T Consensus 1 KVlvvGaGglGce~~k~La~~Gvg~i~iiD~D~Ie~SNLnRQfLf~~~dvGk~Ka~vAa~~l~~~N-p~~~I~~~~~-~v 78 (234)
T cd01484 1 KVLLVGAGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRN-PNCKVVPYQN-KV 78 (234)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEECCCEECCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHC-CCCEEEEEEC-CC
T ss_conf 989994888799999999983998699975990056770130244644268822999999999878-9977999805-56
Q ss_pred H-HHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCC
Q ss_conf 9-9999999720789989996798657899999999984799430675467600
Q gi|254780716|r 82 V-DQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGVK 134 (475)
Q Consensus 82 v-~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~~ 134 (475)
. +++++ ....+.=|+|+|+.- +.+.-.-....|-..++-++|.|++|...
T Consensus 79 ~~e~~~~--~~f~~~~DvVi~alD-N~~aR~~vN~~c~~~~~PLIegGt~G~~G 129 (234)
T cd01484 79 GPEQDFN--DTFFEQFHIIVNALD-NIIARRYVNGMLIFLIVPLIESGTEGFKG 129 (234)
T ss_pred CCCCCCC--HHHHHHCCEEEECCC-CHHHHHHHHHHHHHHCCCEEEECCCCCEE
T ss_conf 8621057--988852999998857-88899999999998099859720246147
No 410
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=93.28 E-value=0.73 Score=25.92 Aligned_cols=117 Identities=15% Similarity=0.228 Sum_probs=78.3
Q ss_pred ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCC-CCCEE--CCCHHHHHHHCCCCCEEEEECCCHHHHHHHH
Q ss_conf 15711168899999789859997399899999997122112-78403--2898999860577889999769906999999
Q gi|254780716|r 10 GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLS-QKVIV--TKNLEQMVEAVCKPRKILMMVTDGDPVDQLI 86 (475)
Q Consensus 10 GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~-~~~~~--~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi 86 (475)
|-|.++--+| ++...-+|+..+++++..+-...+.++.. .++.. -..++ ....+++|+.||+- -|...++++
T Consensus 44 GtGsi~iE~a--~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~-~L~~~~~~daiFIG--Gg~~i~~il 118 (187)
T COG2242 44 GTGSITIEWA--LAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPE-ALPDLPSPDAIFIG--GGGNIEEIL 118 (187)
T ss_pred CCCHHHHHHH--HHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCHH-HHCCCCCCCEEEEC--CCCCHHHHH
T ss_conf 8668999999--739885599992588899999999998499967999546457-63699999999987--987778999
Q ss_pred HHHHHCCCCC-CEEEECCCCCHHHHHHHHHHHHHCCC-CEECCCCCCCC
Q ss_conf 9997207899-89996798657899999999984799-43067546760
Q gi|254780716|r 87 DKLKPLLSPE-DILLDGGNSHFCDTQIRSLQLSEKGI-YFIGIGVSGGV 133 (475)
Q Consensus 87 ~~l~~~l~~g-~iiID~sts~~~~t~~~~~~l~~kgi-~fid~pVSGG~ 133 (475)
+.....|++| .+|++..| .+......+.+++.|+ ..+-..||-+.
T Consensus 119 e~~~~~l~~ggrlV~nait--lE~~~~a~~~~~~~g~~ei~~v~is~~~ 165 (187)
T COG2242 119 EAAWERLKPGGRLVANAIT--LETLAKALEALEQLGGREIVQVQISRGK 165 (187)
T ss_pred HHHHHHCCCCCEEEEEEEC--HHHHHHHHHHHHHCCCCEEEEEEEECCE
T ss_conf 9999971868769998600--8889999999997298569999842352
No 411
>PRK12744 short chain dehydrogenase; Provisional
Probab=93.27 E-value=0.72 Score=25.96 Aligned_cols=80 Identities=15% Similarity=0.287 Sum_probs=50.6
Q ss_pred EEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHH----HHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEE--ECC
Q ss_conf 5698--157111688999997898599973998999----99997122112784032898999860577889999--769
Q gi|254780716|r 6 IGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELT----DVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILM--MVT 77 (475)
Q Consensus 6 IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~----~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil--~vp 77 (475)
+.+| |-+-+|..+|+.|++.|.+|.+.+++.++. +++.++.... ..+.+.+ -|.
T Consensus 10 valVTGgs~GIG~aiA~~la~~Ga~vv~~~~~~~~~~~~~~~~~~~~~~~------------------g~~~~~~~~Dv~ 71 (257)
T PRK12744 10 VVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAATKADAEETVAAVKAA------------------GAKAVAFQADLT 71 (257)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHC------------------CCCEEEEECCCC
T ss_conf 89992887589999999999879989999378743689999999999973------------------992899976889
Q ss_pred CHHHHHHHHHHHHHCCCCCCEEEECC
Q ss_conf 90699999999972078998999679
Q gi|254780716|r 78 DGDPVDQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 78 ~g~~v~~vi~~l~~~l~~g~iiID~s 103 (475)
+.+.++++++.+.....+=|++|...
T Consensus 72 ~~~~v~~~~~~~~~~~G~iDilVnnA 97 (257)
T PRK12744 72 TAAAVEKLFDDAKAAFGRPDIAINTV 97 (257)
T ss_pred CHHHHHHHHHHHHHHCCCCCEEEECC
T ss_conf 99999999999999809988999766
No 412
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=93.25 E-value=0.74 Score=25.88 Aligned_cols=79 Identities=16% Similarity=0.330 Sum_probs=54.1
Q ss_pred ECCHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHH
Q ss_conf 1571116889999978985999-739989999999712211278403289899986057788999976990699999999
Q gi|254780716|r 10 GLGSMGSNLSLNILDKGFRLAV-YNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQLIDK 88 (475)
Q Consensus 10 GLG~MG~~mA~nL~~~G~~V~v-ydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi~~ 88 (475)
|-+-+|..+|+.|++.|.+|.+ |+++.+..+++.++..... + .+++.+-.-+.+.+.++++++.
T Consensus 16 gs~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~-g--------------~~~~~~~~Dv~~~~~~~~~~~~ 80 (260)
T PRK08416 16 GTRGIGKAIVYEFAQSGVNIAFTYNSNVEEADKIAQDLEKKY-G--------------IKARAYPLNILEPETYKELFKK 80 (260)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHH-C--------------CCEEEEECCCCCHHHHHHHHHH
T ss_conf 340999999999998799999985998899999999998841-9--------------8369997788999999999999
Q ss_pred HHHCCCCCCEEEECC
Q ss_conf 972078998999679
Q gi|254780716|r 89 LKPLLSPEDILLDGG 103 (475)
Q Consensus 89 l~~~l~~g~iiID~s 103 (475)
+...+..=|++|...
T Consensus 81 i~~~~g~iDilVnnA 95 (260)
T PRK08416 81 IDADFDRVDFFISNA 95 (260)
T ss_pred HHHHHCCCCEEEECC
T ss_conf 999819978998643
No 413
>pfam03720 UDPG_MGDP_dh_C UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain. The UDP-glucose/GDP-mannose dehydrogenaseses are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate.
Probab=93.22 E-value=0.53 Score=26.94 Aligned_cols=81 Identities=20% Similarity=0.319 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHC
Q ss_conf 11168899999789859997399899999997122112784032898999860577889999769906999999999720
Q gi|254780716|r 13 SMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQLIDKLKPL 92 (475)
Q Consensus 13 ~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi~~l~~~ 92 (475)
.....++..|.++|.+|.+||...+.-+ ..+.....++.+.++. .+.|++++++.+=-.--+..+...
T Consensus 17 S~s~~l~~~L~~~g~~v~~~DP~v~~~~---------~~~~~~~~~~~~~~~~---~D~iii~t~h~~f~~i~~~~~~~~ 84 (99)
T pfam03720 17 SPALDIIEELLEEGAEVRVYDPYVPEEH---------EDGVTLVDDLEEALKG---ADAIVILTDHDEFRSLDWAKLKKL 84 (99)
T ss_pred CCHHHHHHHHHHCCCEEEEECCCCCHHH---------HCCEEEECCHHHHHHC---CCEEEEEECCHHHHCCCHHHHHHH
T ss_conf 8589999999987998999999579567---------0534553358889626---897999737288715899999975
Q ss_pred CCCCCEEEECCCCC
Q ss_conf 78998999679865
Q gi|254780716|r 93 LSPEDILLDGGNSH 106 (475)
Q Consensus 93 l~~g~iiID~sts~ 106 (475)
++ ..+|+|+-+..
T Consensus 85 ~k-~~~I~D~~~i~ 97 (99)
T pfam03720 85 MK-PPVVFDGRNVL 97 (99)
T ss_pred CC-CCEEEEECCCC
T ss_conf 69-99999805862
No 414
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.22 E-value=0.75 Score=25.85 Aligned_cols=82 Identities=15% Similarity=0.235 Sum_probs=50.2
Q ss_pred EEEEECC---HHHHHHHHHHHHCCCEEEEEECC-----------HHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCE
Q ss_conf 5698157---11168899999789859997399-----------899999997122112784032898999860577889
Q gi|254780716|r 6 IGIIGLG---SMGSNLSLNILDKGFRLAVYNKD-----------FELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRK 71 (475)
Q Consensus 6 IGiIGLG---~MG~~mA~nL~~~G~~V~vydr~-----------~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~ 71 (475)
+=+.|-+ -+|.++|+.|++.|.+|.+..++ .+...++.++....+ .+...
T Consensus 9 alVTGas~~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----------------~~~~~ 72 (257)
T PRK12859 9 AVVTGVSRLDGIGAAICKELAEAGYDIFFTYWTAYDKEMPWGVDQSEQIQLQEELLKNG----------------VKVSS 72 (257)
T ss_pred EEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCC----------------CEEEE
T ss_conf 99928899986299999999987998999836520111234537579999999999549----------------85999
Q ss_pred EEEECCCHHHHHHHHHHHHHCCCCCCEEEECC
Q ss_conf 99976990699999999972078998999679
Q gi|254780716|r 72 ILMMVTDGDPVDQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 72 Iil~vp~g~~v~~vi~~l~~~l~~g~iiID~s 103 (475)
+-.-|.+.+.++.+++.+...+..-|++|...
T Consensus 73 ~~~Dl~~~~~~~~~i~~~~~~~g~iDilVnnA 104 (257)
T PRK12859 73 MELDLTQNDAPKELINKVTEQLGYPHILINNA 104 (257)
T ss_pred EECCCCCHHHHHHHHHHHHHHCCCCCEEEECC
T ss_conf 98358999999999999999829998999899
No 415
>TIGR02352 thiamin_ThiO glycine oxidase ThiO; InterPro: IPR012727 This family consists of the homotetrameric, FAD-dependent glycine oxidase ThiO, from species such as Bacillus subtilis that use glycine in thiamine biosynthesis. In general, members of this family will not be found in species such as Escherichia coli that instead use tyrosine and the ThiH protein .; GO: 0016491 oxidoreductase activity, 0050660 FAD binding.
Probab=93.21 E-value=0.14 Score=31.25 Aligned_cols=36 Identities=17% Similarity=0.444 Sum_probs=31.5
Q ss_pred EEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Q ss_conf 569815711168899999789859997399899999
Q gi|254780716|r 6 IGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDV 41 (475)
Q Consensus 6 IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~ 41 (475)
|.|||=|+.|..+|..|+++|+.|.++|++++....
T Consensus 1 ~~ViGGGvIGL~~A~~L~~~G~~V~l~~~~~~~g~~ 36 (357)
T TIGR02352 1 VLVIGGGVIGLSVAVELAERGHSVTLLDRDPTVGGG 36 (357)
T ss_pred CEEECCHHHHHHHHHHHHHCCCCEEEEECCCCHHHH
T ss_conf 978453187899999999749938999658604567
No 416
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=93.19 E-value=0.75 Score=25.81 Aligned_cols=33 Identities=15% Similarity=0.209 Sum_probs=10.9
Q ss_pred EEEEECCHHHHHHHHHHHHCCC-EEEEEECCHHH
Q ss_conf 5698157111688999997898-59997399899
Q gi|254780716|r 6 IGIIGLGSMGSNLSLNILDKGF-RLAVYNKDFEL 38 (475)
Q Consensus 6 IGiIGLG~MG~~mA~nL~~~G~-~V~vydr~~~~ 38 (475)
+-++|.|.+|...+.-+...|- +|.+.|+++++
T Consensus 173 VlV~G~G~iGl~~~~~ak~~Ga~~Vi~~d~~~~r 206 (343)
T PRK09880 173 VFISGVGPIGCLIVSAVKTLGAAEIVCADLSPRS 206 (343)
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEEECCHHH
T ss_conf 9998477679999999998699879999797899
No 417
>KOG3124 consensus
Probab=93.14 E-value=0.11 Score=32.01 Aligned_cols=162 Identities=19% Similarity=0.275 Sum_probs=91.0
Q ss_pred EEEEEECCHHHHHHHHHHHHCCCE----EEEEECCHHHHHH--HHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCC
Q ss_conf 056981571116889999978985----9997399899999--9971221127840328989998605778899997699
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGFR----LAVYNKDFELTDV--FIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTD 78 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~~----V~vydr~~~~~~~--l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~ 78 (475)
.|||||-|+|-..+++.+...|+. +..+-.+ ++... +.+. .+..+.+-.+.+. ..+++++++..
T Consensus 2 ~~gfigag~ma~ala~g~~~~Gi~~~~~i~~s~~~-~~~~~~~~~~~------g~~~~~~n~~~~~---~s~v~~~svKp 71 (267)
T KOG3124 2 KVGFIGAGNMAQALASGFVASGIIEANRIWASVQT-ERSLGLMFEAL------GVKTVFTNLEVLQ---ASDVVFLSVKP 71 (267)
T ss_pred CEEEECHHHHHHHHHHCCCCCCCCCHHHEEEECCC-HHHHHHHHHCC------CCEEEECHHHHHH---HCCCEEEEECC
T ss_conf 63586355569999710434687752222452573-16666665507------8534412377775---06532675361
Q ss_pred HHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEEC---CHHHHHHHH
Q ss_conf 06999999999720789989996798657899999999984799430675467600035684378845---489998889
Q gi|254780716|r 79 GDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGVKGARSGASLMVGG---NEKAYNRVE 155 (475)
Q Consensus 79 g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~~gA~~G~slMvGG---~~~~~~~~~ 155 (475)
..+.+|..++.+.+..++|++-+--...-.+.. ..+. -..+.+-+ +.-.+.--..|.+.|..| ..+.-+.++
T Consensus 72 -~~i~~vls~~~~~~~~~~iivS~aaG~tl~~l~--~~l~-~~~rviRv-mpNtp~~v~eg~sv~~~g~~~~~~D~~l~~ 146 (267)
T KOG3124 72 -QVIESVLSEIKPKVSKGKIIVSVAAGKTLSSLE--SKLS-PPTRVIRV-MPNTPSVVGEGASVYAIGCHATNEDLELVE 146 (267)
T ss_pred -HHHHHHHHCCCCCCCCCEEEEEEEECCCHHHHH--HHCC-CCCCEEEE-CCCCHHHHHCCCEEEEECCCCCHHHHHHHH
T ss_conf -127988604752122560899975144689889--7548-87725881-489800341674798507874154699999
Q ss_pred HHHHHHHCCCC-CCCEE-EEECCCCHHH
Q ss_conf 99998750156-78618-9856987467
Q gi|254780716|r 156 NILLSISAKYQ-NSPCC-ALLGPDGSGH 181 (475)
Q Consensus 156 piL~~iaak~~-~~~cv-~y~G~~GsGh 181 (475)
.+|...+.-.. .+.|+ .+.|=+|||-
T Consensus 147 ~ll~~vG~~~evpE~~iDavTgLsGSgP 174 (267)
T KOG3124 147 ELLSAVGLCEEVPEKCIDAVTGLSGSGP 174 (267)
T ss_pred HHHHHCCCCEECCHHHHHHHHHCCCCCH
T ss_conf 9998638521074876267761367749
No 418
>PRK09126 hypothetical protein; Provisional
Probab=93.11 E-value=0.15 Score=31.01 Aligned_cols=37 Identities=19% Similarity=0.443 Sum_probs=34.7
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHH
Q ss_conf 9988056981571116889999978985999739989
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFE 37 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~ 37 (475)
|++.+|-|||-|--|..+|.-|.+.|++|.++++.+.
T Consensus 1 Mm~~DV~IvGaGp~Gl~lA~~La~~G~~v~viE~~~~ 37 (392)
T PRK09126 1 MMHSDILVVGAGPAGLSFARSLAGSGLKVTLIERQPL 37 (392)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf 9989999999258999999999868998999908985
No 419
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=93.10 E-value=0.78 Score=25.72 Aligned_cols=74 Identities=18% Similarity=0.334 Sum_probs=53.3
Q ss_pred EEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 5698--15711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 6 IGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 6 IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
+.+| |-+-+|..+|+.|++.|++|.+.||+.++..+ .. .+ ..+-.-|.+.+.++
T Consensus 10 ~alITG~s~GIG~aia~~la~~Ga~V~~~~r~~~~l~~---~~-----~~----------------~~~~~Dv~~~~~v~ 65 (253)
T PRK08220 10 TVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFEQLNE---QY-----PF----------------ATFVLDVADAAAVA 65 (253)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHC---CC-----CE----------------EEEEEECCCHHHHH
T ss_conf 89995885689999999999879999999788778748---99-----77----------------99997379999999
Q ss_pred HHHHHHHHCCCCCCEEEECC
Q ss_conf 99999972078998999679
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~s 103 (475)
++++.+.....+=|++|...
T Consensus 66 ~~~~~~~~~~g~iDilVnnA 85 (253)
T PRK08220 66 QVCQRLLAETGPLDVLVNVA 85 (253)
T ss_pred HHHHHHHHHCCCCCEEEECC
T ss_conf 99999999739988899899
No 420
>PRK05086 malate dehydrogenase; Provisional
Probab=93.03 E-value=0.58 Score=26.67 Aligned_cols=102 Identities=18% Similarity=0.230 Sum_probs=53.7
Q ss_pred EEEEEEC-CHHHHHHHHHHHHC---CCEEEEEECCHHH---HHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEEC-
Q ss_conf 0569815-71116889999978---9859997399899---99999712211278403289899986057788999976-
Q gi|254780716|r 5 DIGIIGL-GSMGSNLSLNILDK---GFRLAVYNKDFEL---TDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMV- 76 (475)
Q Consensus 5 ~IGiIGL-G~MG~~mA~nL~~~---G~~V~vydr~~~~---~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~v- 76 (475)
+|++||- |+.|+.+|.-|..+ +-++..+|+.+.. +-++.. .. ..-...... -.+.-+.++..++|++.-
T Consensus 2 KV~IiGA~G~VG~s~A~~l~~~~~~~~el~L~Di~~~~~G~alDL~h-~~-~~~~~~~~~-~~~~~~~l~~adiVvitAG 78 (312)
T PRK05086 2 KVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSH-IP-TAVKIKGFS-GEDPTPALEGADVVLISAG 78 (312)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHC-CC-CCCCCCEEE-CCCHHHHHCCCCEEEECCC
T ss_conf 89999899869999999998289877749997588886105656547-87-546653461-6986787179999998789
Q ss_pred --------------CCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHH
Q ss_conf --------------990699999999972078998999679865789999
Q gi|254780716|r 77 --------------TDGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQI 112 (475)
Q Consensus 77 --------------p~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~ 112 (475)
.+.+.+.++...+..+. |+.+++-.| +|-|+.-
T Consensus 79 ~~rkpG~tR~dLl~~Na~I~~~i~~~I~~~~-p~aiiivvs--NPvD~mt 125 (312)
T PRK05086 79 VARKPGMDRSDLFNVNAGIVKNLVEKVAKTC-PKACIGIIT--NPVNTTV 125 (312)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC-CCCEEEEEC--CCHHHHH
T ss_conf 8998589889999987899999999887208-971899954--8327789
No 421
>PRK06125 short chain dehydrogenase; Provisional
Probab=93.03 E-value=0.79 Score=25.65 Aligned_cols=38 Identities=11% Similarity=0.212 Sum_probs=32.7
Q ss_pred ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCC
Q ss_conf 15711168899999789859997399899999997122
Q gi|254780716|r 10 GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKIS 47 (475)
Q Consensus 10 GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~ 47 (475)
|-+-||..+|+.|++.|.+|.+.+|+.++.++..++..
T Consensus 15 ~s~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~l~ 52 (259)
T PRK06125 15 ASKGIGAAAAEAFAAEGCHLVLAARDADALAALAADLR 52 (259)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
T ss_conf 77689999999999879989999798899999999998
No 422
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=92.99 E-value=0.8 Score=25.61 Aligned_cols=124 Identities=21% Similarity=0.256 Sum_probs=69.4
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCE----EEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEEC
Q ss_conf 9988056981571116889999978985----999739989999999712211278403289899986057788999976
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGFR----LAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMV 76 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~~----V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~v 76 (475)
|.|-++++||-|+.|.-+...+.+..+- +.+-|...+-.....+.| +
T Consensus 2 ~~k~~vAIiGsGnIGtDLm~Ki~Rs~~le~~~~vG~dp~S~GL~rA~~lG------v----------------------- 52 (298)
T PRK08300 2 MSKIKVAIIGSGNIGTDLMIKILRSPHLEPVAMVGIDPESDGLARARRLG------V----------------------- 52 (298)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHCC------C-----------------------
T ss_conf 87534999888833899999986577610699980598984999999849------9-----------------------
Q ss_pred CCHHHHHHHHHHHHHCC--CCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCC-CCC----------C-CCCCCCEE
Q ss_conf 99069999999997207--8998999679865789999999998479943067546-760----------0-03568437
Q gi|254780716|r 77 TDGDPVDQLIDKLKPLL--SPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVS-GGV----------K-GARSGASL 142 (475)
Q Consensus 77 p~g~~v~~vi~~l~~~l--~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVS-GG~----------~-gA~~G~sl 142 (475)
+ ...+=+++++... ..-||+-|.++. ..-.+..+.+++.|+..+|..-+ -|+ . .+.+=.-+
T Consensus 53 ~---ts~~GId~ll~~~~~~~idiVFDATSA--~aH~~h~~~l~~~g~~~IDLTPAaiGp~~VP~VNl~~~l~~~NvNMV 127 (298)
T PRK08300 53 A---TTAEGIDGLLAHPEFDDIDIVFDATSA--GAHVENAAKLRELGVRVIDLTPAAIGPYCVPAVNLDEHLDAPNVNMV 127 (298)
T ss_pred C---CCCCCHHHHHHCCCCCCCCEEEECCCH--HHHHHHHHHHHHCCCEEEECCCCCCCCEEECCCCHHHHCCCCCCCEE
T ss_conf 6---637679999618335687889978980--66899999999739879967700269878763778995579986436
Q ss_pred EEECCHHHHHHHHHHHHHHHC
Q ss_conf 884548999888999998750
Q gi|254780716|r 143 MVGGNEKAYNRVENILLSISA 163 (475)
Q Consensus 143 MvGG~~~~~~~~~piL~~iaa 163 (475)
-|||... -|+..+++.
T Consensus 128 TCGGQAt-----iPiv~Avsr 143 (298)
T PRK08300 128 TCGGQAT-----IPIVAAVSR 143 (298)
T ss_pred EECCCHH-----HHHHHHHHH
T ss_conf 5557302-----189999874
No 423
>TIGR00465 ilvC ketol-acid reductoisomerase; InterPro: IPR013023 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine . The enzyme forms a tetramer of similar but non-identical chains, and requires magnesium as a cofactor. ; GO: 0016491 oxidoreductase activity, 0009082 branched chain family amino acid biosynthetic process.
Probab=92.98 E-value=0.46 Score=27.41 Aligned_cols=98 Identities=22% Similarity=0.240 Sum_probs=62.1
Q ss_pred CCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCH
Q ss_conf 880569815711168899999789859997399899---99999712211278403289899986057788999976990
Q gi|254780716|r 3 QADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFEL---TDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDG 79 (475)
Q Consensus 3 k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~---~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g 79 (475)
...+++||.|..|.+-+.|+.+.|.++.+--+.... ...+.+. ....-.+-..+..+-+..+..++++.++|+.
T Consensus 3 ~~~~~~~g~g~~g~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~---~~~gw~pg~~~~~~~~~~~~~~~~~~l~pd~ 79 (344)
T TIGR00465 3 GKTVAIIGYGSQGHAQGLNLRDSGLNVIVGLRKGGIAEKRASWKKA---EEDGWVPGFKVLTVEEAAKRADLILNLLPDE 79 (344)
T ss_pred CCEEEEEECCCCCCHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHH---HHCCCCCCCHHHHHHHHHCCCCEEEEECCHH
T ss_conf 8617887327532000012111453157740543023455556544---2124556511233454430134544323213
Q ss_pred HHHHHHHHHHHHCCCCCCEEEECC
Q ss_conf 699999999972078998999679
Q gi|254780716|r 80 DPVDQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 80 ~~v~~vi~~l~~~l~~g~iiID~s 103 (475)
..-......+.|.+..|.++.-.-
T Consensus 80 ~~~~~~~~~~~p~~~~g~~~~~~~ 103 (344)
T TIGR00465 80 VQPEVYEAEIKPLLKEGKTLGFSH 103 (344)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEC
T ss_conf 445666777665552264213202
No 424
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=92.98 E-value=0.8 Score=25.60 Aligned_cols=105 Identities=18% Similarity=0.213 Sum_probs=58.5
Q ss_pred CEEEEEEC-CHHHHHHHHHHHHCC-------CEEEEEECCHHH--HH----HHHHHCCCCCCCCEECCCHHHHHHHCCCC
Q ss_conf 80569815-711168899999789-------859997399899--99----99971221127840328989998605778
Q gi|254780716|r 4 ADIGIIGL-GSMGSNLSLNILDKG-------FRLAVYNKDFEL--TD----VFIKKISGLSQKVIVTKNLEQMVEAVCKP 69 (475)
Q Consensus 4 ~~IGiIGL-G~MG~~mA~nL~~~G-------~~V~vydr~~~~--~~----~l~~~~~~~~~~~~~~~s~~e~v~~l~~p 69 (475)
.+|.+||- |..|+++|..|+... ..+..||..+.. .+ ++.+........+....++.+ .++..
T Consensus 3 ~KV~IiGAaG~IG~~la~~la~g~l~g~~~~v~l~L~Di~~~~~~l~G~amDl~~~a~~~~~~v~~~~~~~~---a~~~a 79 (322)
T cd01338 3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITDDPNV---AFKDA 79 (322)
T ss_pred EEEEEECCCCHHHHHHHHHHHHCHHCCCCCEEEEEEECCCCCCCCCCEEEEEHHHCCCCCCCCEEEECCHHH---HHCCC
T ss_conf 099998999689999999997111307997269999757575666765774453267654587797488789---83788
Q ss_pred CEEEEECC---------------CHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHH
Q ss_conf 89999769---------------906999999999720789989996798657899999
Q gi|254780716|r 70 RKILMMVT---------------DGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIR 113 (475)
Q Consensus 70 r~Iil~vp---------------~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~ 113 (475)
++|++.-- +.+.+.++...+..+..|+.+++-.|| |-|+.-.
T Consensus 80 DvVvitaG~prkPG~tR~DLl~~Na~I~~~~~~~i~~~a~p~~~vivvsN--Pvd~~~~ 136 (322)
T cd01338 80 DWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGN--PCNTNAL 136 (322)
T ss_pred CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC--HHHHHHH
T ss_conf 78999368789989818999998689999999999975798838999578--1888999
No 425
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=92.97 E-value=0.81 Score=25.59 Aligned_cols=72 Identities=18% Similarity=0.289 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHC
Q ss_conf 11168899999789859997399899999997122112784032898999860577889999769906999999999720
Q gi|254780716|r 13 SMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQLIDKLKPL 92 (475)
Q Consensus 13 ~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi~~l~~~ 92 (475)
-.|.+.|+.|+++|++|..-.|..++.+++.++... ..+ ..+-+-|.+.+.++..++.+...
T Consensus 17 GiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~--~~~----------------~~~~~DVtD~~~~~~~i~~~~~~ 78 (246)
T COG4221 17 GIGEATARALAEAGAKVVLAARREERLEALADEIGA--GAA----------------LALALDVTDRAAVEAAIEALPEE 78 (246)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCC--CCE----------------EEEEECCCCHHHHHHHHHHHHHH
T ss_conf 688999999997899699986368899999986256--743----------------78961367889999999999975
Q ss_pred CCCCCEEEEC
Q ss_conf 7899899967
Q gi|254780716|r 93 LSPEDILLDG 102 (475)
Q Consensus 93 l~~g~iiID~ 102 (475)
..+=|++|.-
T Consensus 79 ~g~iDiLvNN 88 (246)
T COG4221 79 FGRIDILVNN 88 (246)
T ss_pred HCCCCEEEEC
T ss_conf 1760589966
No 426
>PRK09072 short chain dehydrogenase; Provisional
Probab=92.90 E-value=0.82 Score=25.53 Aligned_cols=80 Identities=15% Similarity=0.295 Sum_probs=49.8
Q ss_pred EEEEEEC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 0569815-711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 5 DIGIIGL-GSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 5 ~IGiIGL-G~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
.+=+.|- +-+|..+|+.|++.|++|.+.+|+.++.+++.++... .++ ..+..-|.+.+.++
T Consensus 7 ~vlITGassGIG~a~A~~la~~G~~vil~~R~~~~L~~~~~~l~~--~~~----------------~~~~~Dls~~~~~~ 68 (262)
T PRK09072 7 RVLLTGASGGIGEALAEALCAAGARLLLVGRNAEKLEALAARPYP--GRV----------------RWVVADLTSEAGRE 68 (262)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCC--CCE----------------EEEEEECCCHHHHH
T ss_conf 899948623999999999998799899998989999999998458--976----------------99997179999999
Q ss_pred HHHHHHHHCCCCCCEEEECC
Q ss_conf 99999972078998999679
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~s 103 (475)
.+.+.+. ...+=|++|...
T Consensus 69 ~~~~~~~-~~g~iDiLInNA 87 (262)
T PRK09072 69 AVLARAR-EMGGINVLINNA 87 (262)
T ss_pred HHHHHHH-HHCCCCEEEECC
T ss_conf 9999999-849998999899
No 427
>TIGR01316 gltA glutamate synthase (NADPH), homotetrameric; InterPro: IPR006004 One pathway for the assimilation of ammonia and glutamate biosynthesis involves homotetrameric glutamate synthase (1.4.1.13 from EC) which transfers the amide group of glutamine to 2-oxoglutarate to yield two molecules of glutamate . 2 L-glutamate + NADP^+ = L-glutamine + 2-oxoglutarate + NADPH + H^+. .
Probab=92.80 E-value=0.18 Score=30.48 Aligned_cols=143 Identities=19% Similarity=0.202 Sum_probs=70.5
Q ss_pred CCCEEEEEECCHHHHHHHHHHHHCCCEEEEEEC-----------------CHHH----HHHHHHHCCCCCC-CCEE-CCC
Q ss_conf 988056981571116889999978985999739-----------------9899----9999971221127-8403-289
Q gi|254780716|r 2 KQADIGIIGLGSMGSNLSLNILDKGFRLAVYNK-----------------DFEL----TDVFIKKISGLSQ-KVIV-TKN 58 (475)
Q Consensus 2 ~k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr-----------------~~~~----~~~l~~~~~~~~~-~~~~-~~s 58 (475)
++.+|++||-|-=|...|..|+++||+|+||.- .++- ++.|.+-|-..-- -+.+ .-|
T Consensus 141 t~~kVAViGaGPAGL~cA~elAk~Gh~VtvfEALhKPGGV~~YGIPefRLpKei~~~E~k~LkklGv~fr~~~lvGkt~T 220 (462)
T TIGR01316 141 TKKKVAVIGAGPAGLACASELAKKGHEVTVFEALHKPGGVLAYGIPEFRLPKEIVETEVKKLKKLGVKFRTDYLVGKTVT 220 (462)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEECCEECCCHH
T ss_conf 88779998468214688999974798699997148998567536888548757889888876326637994437505112
Q ss_pred HHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCC
Q ss_conf 89998605778899997699069999999997207899899967986578999999999847994306754676000356
Q gi|254780716|r 59 LEQMVEAVCKPRKILMMVTDGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGVKGARS 138 (475)
Q Consensus 59 ~~e~v~~l~~pr~Iil~vp~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~~gA~~ 138 (475)
++||.+.- .-|-||+-+-+|.+=.--+ ||+-+- +=-+-.|-..|.+..+....---|.||.=|
T Consensus 221 L~eL~~~Y-GfDAVFIgtGAG~pkl~Ni--------pG~~L~--gvysA~dfLtR~nLmKAyefp~~dtPv~~g------ 283 (462)
T TIGR01316 221 LEELLEKY-GFDAVFIGTGAGLPKLLNI--------PGEELK--GVYSANDFLTRVNLMKAYEFPKKDTPVEVG------ 283 (462)
T ss_pred HHHHHHHC-CCCEEEEEECCCCCEECCC--------CCHHHC--CHHHHHHHHHHHHHHHHHCCCCCCCCEEEC------
T ss_conf 88888751-9707999506898700167--------843434--002234688777776542366788756544------
Q ss_pred CCEEEEECCHHHHHHHHHHHHHH
Q ss_conf 84378845489998889999987
Q gi|254780716|r 139 GASLMVGGNEKAYNRVENILLSI 161 (475)
Q Consensus 139 G~slMvGG~~~~~~~~~piL~~i 161 (475)
...+.+||---+.+....-|..=
T Consensus 284 K~vvviGgGntAvD~artAlRLG 306 (462)
T TIGR01316 284 KKVVVIGGGNTAVDAARTALRLG 306 (462)
T ss_pred CEEEEECCCHHHHHHHHHHHHCC
T ss_conf 76899878536787776664528
No 428
>PRK08017 short chain dehydrogenase; Provisional
Probab=92.76 E-value=0.86 Score=25.40 Aligned_cols=79 Identities=16% Similarity=0.217 Sum_probs=52.1
Q ss_pred CCCCEEEEEEC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCH
Q ss_conf 99880569815-71116889999978985999739989999999712211278403289899986057788999976990
Q gi|254780716|r 1 MKQADIGIIGL-GSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDG 79 (475)
Q Consensus 1 M~k~~IGiIGL-G~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g 79 (475)
|+| .|=+.|- +-+|..+|+.|+++|++|.+.+|+++..+++.+.+. ..+.+-+.+.
T Consensus 1 M~K-~vlITGassGIG~a~A~~la~~G~~V~~~~r~~~~l~~~~~~~~----------------------~~~~~D~~~~ 57 (256)
T PRK08017 1 MQK-SVLITGCSSGIGLESALELKRQGFRVLAGCRKPDDVARMNSMGF----------------------TGVLIDLDSP 57 (256)
T ss_pred CCC-EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCC----------------------CEEEEECCCH
T ss_conf 997-89996587689999999999879999999699899999985699----------------------4699835898
Q ss_pred HHHHHHHHHHHHCCC-CCCEEEEC
Q ss_conf 699999999972078-99899967
Q gi|254780716|r 80 DPVDQLIDKLKPLLS-PEDILLDG 102 (475)
Q Consensus 80 ~~v~~vi~~l~~~l~-~g~iiID~ 102 (475)
+.++..+++++.... .-|++|..
T Consensus 58 ~~~~~~~~~~~~~~~g~id~linn 81 (256)
T PRK08017 58 ESVDRAADEVIALTDNRLYGIFNN 81 (256)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEEC
T ss_conf 999999999999848974899988
No 429
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase; InterPro: IPR000706 N -Acetylglutamate (NAG) fulfils distinct biological roles in lower and higher organisms. In prokaryotes, lower eukaryotes and plants it is the first intermediate in the biosynthesis of arginine, whereas in ureotelic (excreting nitrogen mostly in the form of urea) vertebrates, it is an essential allosteric cofactor for carbamyl phosphate synthetase I (CPSI), the first enzyme of the urea cycle. The pathway that leads from glutamate to arginine in lower organisms employs eight steps, starting with the acetylation of glutamate to form NAG. In these species, NAG can be produced by two enzymatic reactions: one catalysed by NAG synthase (NAGS) and the other by ornithine acetyltransferase (OAT). In ureotelic species, NAG is produced exclusively by NAGS. In lower organisms, NAGS is feedback-inhibited by L-arginine, whereas mammalian NAGS activity is significantly enhanced by this amino acid. The NAGS genes of bacteria, fungi and mammals are more diverse than other arginine-biosynthesis and urea-cycle genes. The evolutionary relationship between the distinctly different roles of NAG and its metabolism in lower and higher organisms remains to be determined . The pathway from glutamate to arginine is: NAGS; N-acetylglutamate synthase (2.3.1.1 from EC) (glutamate to N-acetylglutamate) NAGK; N-acetylglutamate kinase (2.7.2.8 from EC) (N-acetylglutamate to N-acetylglutamate-5P) NAGSA; N-acetyl-gamma-glutamyl-phosphate reductase (1.2.1.38 from EC) (N-acetylglutamate-5P to N-acetylglumate semialdehyde) Acetylornithine aminotransferase (2.6.1.11 from EC) (N-acetylglumate semialdehyde to N-acetylornithine) Acetylornithine deacetylase (3.5.1.16 from EC) (N-acetylornithine to ornithine) Arginase (3.5.3.1 from EC) (ornithine to arginine) N-acetyl-gamma-glutamyl-phosphate reductase (1.2.1.38 from EC) (AGPR) , is the enzyme that catalyzes the third step in the biosynthesis of arginine from glutamate, the NADP-dependent reduction of N-acetyl-5-glutamyl phosphate into N-acetylglutamate 5-semialdehyde. In bacteria it is a monofunctional protein of 35 to 38 kD (gene argC), while in fungi it is part of a bifunctional mitochondrial enzyme (gene ARG5,6, arg11 or arg-6) which contains a N-terminal acetylglutamate kinase (2.7.2.8 from EC) domain and a C-terminal AGPR domain. In the Escherichia coli enzyme, a cysteine has been shown to be implicated in the catalytic activity, and the region around this residue is well conserved.; GO: 0003942 N-acetyl-gamma-glutamyl-phosphate reductase activity, 0006526 arginine biosynthetic process.
Probab=92.73 E-value=0.5 Score=27.15 Aligned_cols=211 Identities=14% Similarity=0.078 Sum_probs=128.6
Q ss_pred EEEEEEC-CHHHHHHHHHHHHC-CCEEE-EEECCHH-HHHHHHHHCCCCCCCCE--ECCCHHH--HHHHC-CCCCEEEEE
Q ss_conf 0569815-71116889999978-98599-9739989-99999971221127840--3289899--98605-778899997
Q gi|254780716|r 5 DIGIIGL-GSMGSNLSLNILDK-GFRLA-VYNKDFE-LTDVFIKKISGLSQKVI--VTKNLEQ--MVEAV-CKPRKILMM 75 (475)
Q Consensus 5 ~IGiIGL-G~MG~~mA~nL~~~-G~~V~-vydr~~~-~~~~l~~~~~~~~~~~~--~~~s~~e--~v~~l-~~pr~Iil~ 75 (475)
+|||||- |=-|..+.|=|..+ ..+|. .+-.+.. .-+.+.+-...+..... ....+.+ +-+.. +++|+||+.
T Consensus 2 ~V~IvGAsGYtG~EL~RLL~~HP~~e~~~~~ss~~~~aG~~~~~~~P~L~g~~~~~~~~~~~~~~~~~~~L~~~DvVFlA 81 (361)
T TIGR01850 2 KVGIVGASGYTGGELLRLLANHPEVEITYLVSSRESLAGKPLSEVHPHLRGLVDYLNLEPLDDAKLEEIELEDADVVFLA 81 (361)
T ss_pred EEEEEECCCHHHHHHHHHHHCCCCEEEEEEEEEEEHHCCCCHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEC
T ss_conf 68999334446899999984199537888887620113852577366111010023336667667888621376789986
Q ss_pred CCCHHHHHHHHHHHH-HCCCCCCEEEECCCCCHHHHHHHHHHHHHC--CCCEECCCCCCCCCCC-----CCCC-EE-EEE
Q ss_conf 699069999999997-207899899967986578999999999847--9943067546760003-----5684-37-884
Q gi|254780716|r 76 VTDGDPVDQLIDKLK-PLLSPEDILLDGGNSHFCDTQIRSLQLSEK--GIYFIGIGVSGGVKGA-----RSGA-SL-MVG 145 (475)
Q Consensus 76 vp~g~~v~~vi~~l~-~~l~~g~iiID~sts~~~~t~~~~~~l~~k--gi~fid~pVSGG~~gA-----~~G~-sl-MvG 145 (475)
+|+|-. .++. +.+++|-.|||+|=-+.-+....+++.-.. +-..++--|=|=++=- .++. .+ =+|
T Consensus 82 lPhgvs-----~~~~p~~l~~g~~ViDLSADFRl~d~~~Ye~wYG~h~~~~ll~~avYGLpEl~~~re~i~~A~liAnPG 156 (361)
T TIGR01850 82 LPHGVS-----MELAPELLEAGVKVIDLSADFRLKDPEVYEKWYGFHAAPELLQEAVYGLPELHGAREEIKGARLIANPG 156 (361)
T ss_pred CCHHHH-----HHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHCCCEEECCC
T ss_conf 872556-----999999984798699888343369979999966778896666311556767010588984295764488
Q ss_pred CCHH-HHHHHHHHHHHHHCCCCCC-CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHHHHHHHHHH
Q ss_conf 5489-9988899999875015678-6189856987467898877678788899989999999964-28997899999986
Q gi|254780716|r 146 GNEK-AYNRVENILLSISAKYQNS-PCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDS-LNKNPLEISHLFSK 222 (475)
Q Consensus 146 G~~~-~~~~~~piL~~iaak~~~~-~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~-~~~~~~~i~~vf~~ 222 (475)
|=.. +.=.+.|+++.---..... =+-.-.|-+|+|.-.|+-...-| ..|.+..=+=. .+.+-.||..-..+
T Consensus 157 CYpTA~~LaL~PL~~~~l~~~~~~~i~dakSGvSGAGr~as~~~~~~E------~~en~~pY~~~G~HRH~PEI~q~L~~ 230 (361)
T TIGR01850 157 CYPTATLLALAPLLKEGLIDPTSEIIVDAKSGVSGAGRKASEKSHFPE------VNENLRPYKVTGGHRHTPEIEQELGK 230 (361)
T ss_pred CHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHH------HHCCCEECCCCCCCCCHHHHHHHHHH
T ss_conf 617899999899998315676776589887445566777763357344------32770620379985027999998767
Q ss_pred CCCC
Q ss_conf 0688
Q gi|254780716|r 223 WDTG 226 (475)
Q Consensus 223 w~~~ 226 (475)
|.++
T Consensus 231 ~~~~ 234 (361)
T TIGR01850 231 LAGG 234 (361)
T ss_pred HHCC
T ss_conf 6304
No 430
>PRK06701 short chain dehydrogenase; Provisional
Probab=92.72 E-value=0.87 Score=25.35 Aligned_cols=81 Identities=17% Similarity=0.202 Sum_probs=51.8
Q ss_pred EEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 5698--15711168899999789859997399899-99999712211278403289899986057788999976990699
Q gi|254780716|r 6 IGII--GLGSMGSNLSLNILDKGFRLAVYNKDFEL-TDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 6 IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~-~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
+.+| |-.-+|..+|+.|++.|.+|.+.+++.++ .+++.++....... ...+-.-|.+.+.+
T Consensus 47 valVTGgs~GIG~aiA~~la~~GA~V~i~~~~~~~~a~~~~~~~~~~G~~----------------~~~~~~Dv~d~~~v 110 (289)
T PRK06701 47 VALITGGDSGIGRAVAVAFAKEGADIAIVYLDEHEDANETKQRVEKEGVK----------------CLLIPGDVSDEQFC 110 (289)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCE----------------EEEEECCCCCHHHH
T ss_conf 89996825799999999999879989998289467899999999963990----------------89998478999999
Q ss_pred HHHHHHHHHCCCCCCEEEEC
Q ss_conf 99999997207899899967
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDG 102 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~ 102 (475)
+++++........=|++|..
T Consensus 111 ~~~v~~~~~~fG~iDiLVNN 130 (289)
T PRK06701 111 KDAVEETVRELGRLDILVNN 130 (289)
T ss_pred HHHHHHHHHHHCCCCEEEEC
T ss_conf 99999999985999899988
No 431
>KOG2653 consensus
Probab=92.70 E-value=0.71 Score=26.02 Aligned_cols=101 Identities=17% Similarity=0.209 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCC-CCCCCCHHHHHHH
Q ss_conf 999999999999999999999996110145667988999985189468537899999998708885-2000798999999
Q gi|254780716|r 321 KDLENALYASTILSFTQGFWVIGKSSEKYSWSLSLATIARIWRAGCIIRSQILNDIVKSLTEDPSS-TNLLNIPSISEKV 399 (475)
Q Consensus 321 ~~L~~a~~~~~i~syaQGf~ll~~as~~y~w~l~l~~ia~iW~~GCIIrs~lL~~i~~~~~~~~~l-~~Ll~~~~~~~~i 399 (475)
+.+++.+-..-+-..++...+++..-.- =+-.+++++.-|..| -+.|-|++-..++|+-..+. .+|+ +.+.+.-
T Consensus 187 KMVHNGIEYGDMqLI~EaY~vlk~~~gl--s~~eia~vF~~WN~g-eleSfLieIT~dIlk~~d~~G~~lv--~kI~D~a 261 (487)
T KOG2653 187 KMVHNGIEYGDMQLICEAYDVLKSVLGL--SNDEIAEVFDDWNKG-ELESFLIEITADILKFKDEDGKPLV--DKILDKA 261 (487)
T ss_pred HHHCCCCCCCHHHHHHHHHHHHHHHCCC--CHHHHHHHHHHHCCC-CHHHHHHHHHHHHHCEECCCCCCHH--HHHHHHH
T ss_conf 4532674311389999999999984586--678899999764333-1668999986887600056787168--9998641
Q ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf 9524769999999998399847999999
Q gi|254780716|r 400 KKTIPSLRRIVVTCTENGYPVPSLSAAL 427 (475)
Q Consensus 400 ~~~~~~lr~vv~~~i~~gip~P~lsssL 427 (475)
.....+ +|++..+.+.|+|+|.+..|+
T Consensus 262 GqKGTG-kwt~~~Ale~g~Pv~lI~eav 288 (487)
T KOG2653 262 GQKGTG-KWTVISALELGVPVTLIGEAV 288 (487)
T ss_pred CCCCCC-HHHHHHHHHHCCCHHHHHHHH
T ss_conf 687762-899998998189717999999
No 432
>TIGR01983 UbiG ubiquinone biosynthesis O-methyltransferase; InterPro: IPR010233 This entry represents an O-methyltransferase, which is believed to act at two points in the ubiquinone biosynthetic pathway in bacteria (UbiG) and mitochondria (COQ3) , . A separate methylase (MenG/UbiE) catalyses the single C-methylation step. The most commonly used names for genes in this family do not indicate whether this gene is an O-methyl, or C-methyl transferase.; GO: 0008425 2-polyprenyl-6-methoxy-14-benzoquinone methyltransferase activity, 0006744 ubiquinone biosynthetic process.
Probab=92.67 E-value=0.88 Score=25.31 Aligned_cols=97 Identities=20% Similarity=0.195 Sum_probs=67.4
Q ss_pred EEEEECCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHCCCCCC------CCE-ECCCHHHHHHHC---CCCCEEEE
Q ss_conf 56981571116889999978985-99973998999999971221127------840-328989998605---77889999
Q gi|254780716|r 6 IGIIGLGSMGSNLSLNILDKGFR-LAVYNKDFELTDVFIKKISGLSQ------KVI-VTKNLEQMVEAV---CKPRKILM 74 (475)
Q Consensus 6 IGiIGLG~MG~~mA~nL~~~G~~-V~vydr~~~~~~~l~~~~~~~~~------~~~-~~~s~~e~v~~l---~~pr~Iil 74 (475)
+=|+=.|==|+=++--|++.|+. |.+-|.+.+.++..........- .+. -+.|++|+++.- ..-|+|+.
T Consensus 86 ~~vLDVGCGGGlLsE~lAR~Ga~~V~GID~~~~~i~~Ak~Ha~~~~~~~~~~K~i~Y~~~~~E~l~~~~h~~~~FD~V~~ 165 (275)
T TIGR01983 86 LRVLDVGCGGGLLSEPLARLGANKVTGIDASEENIEVAKLHAKKDPLQEALDKKIEYRCTSVEELAEEQHTKKSFDVVTC 165 (275)
T ss_pred CEEEEECCCHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
T ss_conf 77998427857888999755884257752117799999988873340233111145444307887305578415733764
Q ss_pred E-----CCCHHHHHHHHHHHHHCCCCCCEEEECCCCC
Q ss_conf 7-----6990699999999972078998999679865
Q gi|254780716|r 75 M-----VTDGDPVDQLIDKLKPLLSPEDILLDGGNSH 106 (475)
Q Consensus 75 ~-----vp~g~~v~~vi~~l~~~l~~g~iiID~sts~ 106 (475)
| ||+. ..++......++||-+++= ||.+
T Consensus 166 mEvlEHV~dp---~~f~~~c~~llkPgG~lF~-STIN 198 (275)
T TIGR01983 166 MEVLEHVPDP---QAFIKACAQLLKPGGILFF-STIN 198 (275)
T ss_pred EEEEECCCCH---HHHHHHHHHHCCCCCCEEE-ECCC
T ss_conf 3200002788---8999999985089984897-3000
No 433
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent; InterPro: IPR011275 This entry contains bacterial and archaeal malate dehydrogenases, which convert malate into oxaloacetate in the citric acid cycle. The critical residues which discriminate malate dehydrogenase from lactate dehydrogenase have been characterised , and have been used to determine members of this group. ; GO: 0030060 L-malate dehydrogenase activity, 0006108 malate metabolic process.
Probab=92.66 E-value=0.88 Score=25.30 Aligned_cols=102 Identities=18% Similarity=0.250 Sum_probs=70.7
Q ss_pred EEEEEECCHHHHHHHHHHHHCC--CEEEEEEC------CHHHHHHHHHHCC--CCCCCCEECCCHHHHHHHCCCCCEEEE
Q ss_conf 0569815711168899999789--85999739------9899999997122--112784032898999860577889999
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKG--FRLAVYNK------DFELTDVFIKKIS--GLSQKVIVTKNLEQMVEAVCKPRKILM 74 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G--~~V~vydr------~~~~~~~l~~~~~--~~~~~~~~~~s~~e~v~~l~~pr~Iil 74 (475)
+|-+||-|..|+-=|-.|+.|- -+|..-|. .+-|+=++.+... ..+.++++.++.+|-++| ++|.+
T Consensus 3 KisvIGAGfvGaTTAf~lA~KeLard~VLlDiPqvEg~pqGKALDmyEasPv~gFD~kvTGtnnYaDTAnS----DivVi 78 (308)
T TIGR01763 3 KISVIGAGFVGATTAFLLAEKELARDVVLLDIPQVEGVPQGKALDMYEASPVEGFDVKVTGTNNYADTANS----DIVVI 78 (308)
T ss_pred EEEEECCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCHHHCCC----CEEEE
T ss_conf 58997068612589999986740671689850555868886332211027766311236257870021188----37998
Q ss_pred E---------------CCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHH
Q ss_conf 7---------------69906999999999720789989996798657899999
Q gi|254780716|r 75 M---------------VTDGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIR 113 (475)
Q Consensus 75 ~---------------vp~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~ 113 (475)
. =.+.+.+.+|+.++.++ +|+.|||-.+| |-|.+-.
T Consensus 79 TaG~pRKPGMsReDL~s~Na~I~R~v~~~i~~~-Spn~iIvvv~N--PlDaMTy 129 (308)
T TIGR01763 79 TAGLPRKPGMSREDLVSVNADIVREVTSRIVEY-SPNAIIVVVSN--PLDAMTY 129 (308)
T ss_pred CCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHC-CCCCEEEEECC--CHHHHHH
T ss_conf 167887547887899861334689999999731-89968999718--0578999
No 434
>PRK06847 hypothetical protein; Provisional
Probab=92.63 E-value=0.13 Score=31.32 Aligned_cols=37 Identities=22% Similarity=0.312 Sum_probs=32.4
Q ss_pred CCC-CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHH
Q ss_conf 998-8056981571116889999978985999739989
Q gi|254780716|r 1 MKQ-ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFE 37 (475)
Q Consensus 1 M~k-~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~ 37 (475)
|.. .+|-|||-|.-|..+|.-|.+.|++|.+|++.++
T Consensus 1 m~~~kkV~IVGaG~aGL~lA~~L~~~Gi~v~V~E~~~~ 38 (375)
T PRK06847 1 MGAVKKVLIVGGGIGGMSAAIALRKAGISVDLVEIDPE 38 (375)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf 98998799999668999999999967999999908999
No 435
>PRK07069 short chain dehydrogenase; Validated
Probab=92.60 E-value=0.9 Score=25.25 Aligned_cols=78 Identities=14% Similarity=0.198 Sum_probs=52.2
Q ss_pred ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHCCCCCCCCEECCCHHHHHHHCCCCC--EEEEECCCHHHHHHHH
Q ss_conf 15711168899999789859997399899999-99712211278403289899986057788--9999769906999999
Q gi|254780716|r 10 GLGSMGSNLSLNILDKGFRLAVYNKDFELTDV-FIKKISGLSQKVIVTKNLEQMVEAVCKPR--KILMMVTDGDPVDQLI 86 (475)
Q Consensus 10 GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~-l~~~~~~~~~~~~~~~s~~e~v~~l~~pr--~Iil~vp~g~~v~~vi 86 (475)
|-+-+|..+|+.|++.|.+|.+.||+.++..+ +.++.... ..... .+-.-|.+.+.++.++
T Consensus 7 gs~GIG~aia~~la~~Ga~V~i~d~~~~~~~~~~~~~l~~~----------------~~~~~~~~~~~Dv~~~~~v~~~v 70 (251)
T PRK07069 7 AAGGLGRAIARRMAEQGARVFLTDINDAAALDAFAAEINAA----------------HGEGVAFAAVQDVTDEAQWQALL 70 (251)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHC----------------CCCCEEEEEECCCCCHHHHHHHH
T ss_conf 57889999999999869999999689435899999999861----------------59963999957799999999999
Q ss_pred HHHHHCCCCCCEEEECC
Q ss_conf 99972078998999679
Q gi|254780716|r 87 DKLKPLLSPEDILLDGG 103 (475)
Q Consensus 87 ~~l~~~l~~g~iiID~s 103 (475)
+.....+..=|++|...
T Consensus 71 ~~~~~~~G~iDilVNnA 87 (251)
T PRK07069 71 AQAADAMGGLSVLVNNA 87 (251)
T ss_pred HHHHHHCCCCCEEEECC
T ss_conf 99999829998999899
No 436
>PRK08177 short chain dehydrogenase; Provisional
Probab=92.60 E-value=0.9 Score=25.24 Aligned_cols=39 Identities=18% Similarity=0.308 Sum_probs=30.3
Q ss_pred EEEEEC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Q ss_conf 569815-711168899999789859997399899999997
Q gi|254780716|r 6 IGIIGL-GSMGSNLSLNILDKGFRLAVYNKDFELTDVFIK 44 (475)
Q Consensus 6 IGiIGL-G~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~ 44 (475)
+=+.|- .=+|..+|+.|+++|++|.+..|++++.+.+.+
T Consensus 4 ~lITGas~GIG~aia~~l~~~G~~V~~~~R~~~~~~~~~~ 43 (225)
T PRK08177 4 ALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA 43 (225)
T ss_pred EEECCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
T ss_conf 9992734299999999999886999999798877899872
No 437
>KOG1201 consensus
Probab=92.59 E-value=0.9 Score=25.23 Aligned_cols=39 Identities=23% Similarity=0.467 Sum_probs=29.0
Q ss_pred EEECC-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHC
Q ss_conf 98157-1116889999978985999739989999999712
Q gi|254780716|r 8 IIGLG-SMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKI 46 (475)
Q Consensus 8 iIGLG-~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~ 46 (475)
+-|-| -+|+.||+.+++.|..+.+||++++-.++.+++.
T Consensus 43 ITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~ 82 (300)
T KOG1201 43 ITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEI 82 (300)
T ss_pred EECCCCHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHH
T ss_conf 9689860789999999970784899955651239999999
No 438
>PRK05442 malate dehydrogenase; Provisional
Probab=92.59 E-value=0.9 Score=25.23 Aligned_cols=109 Identities=17% Similarity=0.157 Sum_probs=61.2
Q ss_pred CCCC-EEEEEE-CCHHHHHHHHHHHHCC-------CEEEEEECCHHH--HHH----HHHHCCCCCCCCEECCCHHHHHHH
Q ss_conf 9988-056981-5711168899999789-------859997399899--999----997122112784032898999860
Q gi|254780716|r 1 MKQA-DIGIIG-LGSMGSNLSLNILDKG-------FRLAVYNKDFEL--TDV----FIKKISGLSQKVIVTKNLEQMVEA 65 (475)
Q Consensus 1 M~k~-~IGiIG-LG~MG~~mA~nL~~~G-------~~V~vydr~~~~--~~~----l~~~~~~~~~~~~~~~s~~e~v~~ 65 (475)
|+++ +|.++| -|..|++++.+|+... ..++.||..+.. .+- +.+-.-....++....++.+.
T Consensus 1 m~~p~kV~I~GAaG~ig~~l~~~la~g~l~g~~~~v~l~L~Di~~~~~~l~G~ameL~d~a~p~l~~v~~~~~~~~a--- 77 (325)
T PRK05442 1 MKAPVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPQAQKALKGVVMELEDCAFPLLAGVVITDDPKVA--- 77 (325)
T ss_pred CCCCEEEEEECCCCHHHHHHHHHHHCHHHCCCCCCEEEEEECCCCCCCCCCEEEEEHHCCCCCCCCCEEEECCHHHH---
T ss_conf 99972999988886888999999866132089984699996577766655667734211675444876850887898---
Q ss_pred CCCCCEEEEEC--C-------------CHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHH
Q ss_conf 57788999976--9-------------9069999999997207899899967986578999999
Q gi|254780716|r 66 VCKPRKILMMV--T-------------DGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRS 114 (475)
Q Consensus 66 l~~pr~Iil~v--p-------------~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~ 114 (475)
++..++|++.- | +.+.+.++...+..+..++-.++-.|| |-|+.-..
T Consensus 78 ~~~aDvviitag~prkPGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlVv~N--Pvd~~~~v 139 (325)
T PRK05442 78 FKDADVALLVGARPRGPGMERKDLLKANGEIFTAQGKALNEVAARDVKVLVVGN--PANTNALI 139 (325)
T ss_pred HCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC--CHHHHHHH
T ss_conf 379988998078679999748999976088999999999865798718999578--15879999
No 439
>PRK11728 hypothetical protein; Provisional
Probab=92.55 E-value=0.096 Score=32.42 Aligned_cols=36 Identities=33% Similarity=0.521 Sum_probs=31.4
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHC--CCEEEEEECCHH
Q ss_conf 9988056981571116889999978--985999739989
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDK--GFRLAVYNKDFE 37 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~--G~~V~vydr~~~ 37 (475)
|. -+|-+||-|.+|..+|+.|++. +.+|.+.++...
T Consensus 1 m~-yDvvIIGgGIvG~siA~~Ls~~~~~~~V~vlEke~~ 38 (400)
T PRK11728 1 MM-YDFVIIGGGIVGLSTAMQLQDRYPGARIALLEKESG 38 (400)
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCC
T ss_conf 95-309999967999999999995599983999968999
No 440
>TIGR02992 ectoine_eutC ectoine utilization protein EutC; InterPro: IPR014334 Members of this entry are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, Pseudomonas putida and Sinorhizobium meliloti 1021, where it is known to be induced by ectoine). Members belong to the ornithine cyclodeaminase/mu-crystallin family..
Probab=92.53 E-value=0.24 Score=29.52 Aligned_cols=92 Identities=15% Similarity=0.221 Sum_probs=66.5
Q ss_pred EEEEEECCHHHHH--HHHHHHHCCCEEEEEECCHHHHHHHHHHCC-CCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHH
Q ss_conf 0569815711168--899999789859997399899999997122-1127840328989998605778899997699069
Q gi|254780716|r 5 DIGIIGLGSMGSN--LSLNILDKGFRLAVYNKDFELTDVFIKKIS-GLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDP 81 (475)
Q Consensus 5 ~IGiIGLG~MG~~--mA~nL~~~G~~V~vydr~~~~~~~l~~~~~-~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~ 81 (475)
.+.++|-|.--.= -|+-|.+.=-++.+|=|+..|.+.+..... ..+-.++..+++.+.++ ..++|++|-|+..|
T Consensus 131 ~~a~~GAG~QArLQL~AL~LvRdI~~ariWAR~~akAe~~A~~L~~~~G~~v~a~td~~~A~~---~ADI~vTtTP~~~P 207 (326)
T TIGR02992 131 VVAILGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSELGIDVTAATDVRAALS---GADIIVTTTPSETP 207 (326)
T ss_pred HHHHHCCCHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHCC---CCCEEEECCCCCCC
T ss_conf 776752556789999998631521443210255678999999988746906875047686236---68879874879873
Q ss_pred HHHHHHHHHHCCCCCCEEEECCC
Q ss_conf 99999999720789989996798
Q gi|254780716|r 82 VDQLIDKLKPLLSPEDILLDGGN 104 (475)
Q Consensus 82 v~~vi~~l~~~l~~g~iiID~st 104 (475)
|. ...+|+||..|+=||.
T Consensus 208 vl-----~a~wL~pGqh~tAMGs 225 (326)
T TIGR02992 208 VL-----KAEWLEPGQHVTAMGS 225 (326)
T ss_pred CH-----HHHHCCCCCEEEEECC
T ss_conf 02-----0733678878986067
No 441
>KOG3007 consensus
Probab=92.47 E-value=0.82 Score=25.53 Aligned_cols=113 Identities=16% Similarity=0.092 Sum_probs=70.1
Q ss_pred EEEEECCHHHHHHHHHHHHC---CCEEEEEECCHHHHHHHHHHCCCCCCCC----EECCCHHHHHHHCCCCCEEEEECCC
Q ss_conf 56981571116889999978---9859997399899999997122112784----0328989998605778899997699
Q gi|254780716|r 6 IGIIGLGSMGSNLSLNILDK---GFRLAVYNKDFELTDVFIKKISGLSQKV----IVTKNLEQMVEAVCKPRKILMMVTD 78 (475)
Q Consensus 6 IGiIGLG~MG~~mA~nL~~~---G~~V~vydr~~~~~~~l~~~~~~~~~~~----~~~~s~~e~v~~l~~pr~Iil~vp~ 78 (475)
.-++|-|......-.-..+. =-+|.+|||+++.++++.+...+...++ ..+.++++.|. ..++|+.+.++
T Consensus 141 L~i~GsG~qA~~hi~ih~~~~pslreVrIwnht~e~A~~la~~lsk~~~~iqie~~~~qsl~~aV~---~sDIIs~atls 217 (333)
T KOG3007 141 LTIFGSGLQAFWHIYIHIKLIPSLREVRIWNHTNEMALDLAKSLSKLFSNIQIELNQYQSLNGAVS---NSDIISGATLS 217 (333)
T ss_pred EEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEEHHHHHCCCC---CCCEEEECCCC
T ss_conf 999736630489999999760443389864278078999999764146641788773001314554---67547730356
Q ss_pred HHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECC
Q ss_conf 0699999999972078998999679865789999999998479943067
Q gi|254780716|r 79 GDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGI 127 (475)
Q Consensus 79 g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~ 127 (475)
.++.- ....++|| .-||.--++-.+..+...+|-+.+.-|+|.
T Consensus 218 tePil-----fgewlkpg-thIdlVGsf~p~mhEcDdelIq~a~vfVDs 260 (333)
T KOG3007 218 TEPIL-----FGEWLKPG-THIDLVGSFKPVMHECDDELIQSACVFVDS 260 (333)
T ss_pred CCCEE-----EEEEECCC-CEEEEECCCCCHHHHHHHHHHHHHEEEEEC
T ss_conf 78613-----22340687-407640467701777749986533288836
No 442
>PRK11036 putative metallothionein SmtA; Provisional
Probab=92.46 E-value=0.94 Score=25.12 Aligned_cols=145 Identities=12% Similarity=0.140 Sum_probs=77.8
Q ss_pred EEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCC--CCCCCEE-CCCHHHHHHHCCCC-CEEEEE-----CCC
Q ss_conf 98157111688999997898599973998999999971221--1278403-28989998605778-899997-----699
Q gi|254780716|r 8 IIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISG--LSQKVIV-TKNLEQMVEAVCKP-RKILMM-----VTD 78 (475)
Q Consensus 8 iIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~--~~~~~~~-~~s~~e~v~~l~~p-r~Iil~-----vp~ 78 (475)
+.=.|-=+..||..|++.|+.|++.|.+++-.+...+..+. ...++.. ..+..++...++.+ ++|+.. |++
T Consensus 48 VLDvG~G~G~~a~~lA~~Gh~Vt~~D~S~~mL~~A~~~a~~~gv~~~~~~v~~~~q~l~~~~~~~fDlVlcHaVLE~v~d 127 (256)
T PRK11036 48 VLDAGGGEGQTAIKMAELGHQVTLCDLSAEMIQRAKQAAEAKGVSDNMQFIHCAAQDIAQHLETPVDLILFHAVLEWVAD 127 (256)
T ss_pred EEEECCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHCCCCCCEEEEEHHHHHCCC
T ss_conf 99837987798999997799799866999999999999886496612798856899885423688667865136772378
Q ss_pred HHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHH
Q ss_conf 06999999999720789989996798657899999999984799430675467600035684378845489998889999
Q gi|254780716|r 79 GDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGVKGARSGASLMVGGNEKAYNRVENIL 158 (475)
Q Consensus 79 g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~~gA~~G~slMvGG~~~~~~~~~piL 158 (475)
+.+ ++..+...++||-++=-+--.. +.....+.+.. +..++..+.-.. ++.++.+.-+. .-+.+...+
T Consensus 128 P~~---~l~~l~~~lkPGG~lSLmfyN~--~alv~~n~l~G-nf~~a~~~~~~~-----~~~~LtP~~p~-~p~~V~~~l 195 (256)
T PRK11036 128 PKS---VLQTLWSVLRPGGALSLMFYNA--NGLLMHNMVAG-NFDYVQAGMPKR-----KKRTLSPQYPR-DPAQVYQWL 195 (256)
T ss_pred HHH---HHHHHHHHHCCCCEEEEEECCH--HHHHHHHHHHC-CHHHHHHHCCCC-----CCCCCCCCCCC-CHHHHHHHH
T ss_conf 999---9999999758993799984285--16999999825-899997306344-----55216899999-999999999
Q ss_pred HHHHCC
Q ss_conf 987501
Q gi|254780716|r 159 LSISAK 164 (475)
Q Consensus 159 ~~iaak 164 (475)
+..+-+
T Consensus 196 ~~~g~~ 201 (256)
T PRK11036 196 EEAGWQ 201 (256)
T ss_pred HHCCCE
T ss_conf 977982
No 443
>pfam04016 DUF364 Domain of unknown function (DUF364). Archaeal domain of unknown function.
Probab=92.46 E-value=0.94 Score=25.12 Aligned_cols=104 Identities=14% Similarity=0.168 Sum_probs=63.7
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 80569815711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
.+|++||- |+ |++..|.++|.++.+++|++...+. .+... ...+--.-++.++++++ +....++
T Consensus 112 ~kV~vVG~--f~-P~~~~l~~~~~~~~V~Er~~~~~~~--------~~~~~---p~~~~~~lLp~~D~viI--TgstlvN 175 (229)
T pfam04016 112 KKVVVVGY--FA-PVLKRLRERGAEVTVLERNPRLLDP--------AEGDL---PDEAAEELLPEADVVII--TGSTLVN 175 (229)
T ss_pred CEEEEECC--CH-HHHHHHHHCCCCEEEEECCCCCCCC--------CCCCC---CHHHHHHHCCCCCEEEE--EECHHHC
T ss_conf 98999857--75-8899998648967999668755788--------78888---97898875124889999--8403541
Q ss_pred HHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECC
Q ss_conf 99999972078998999679865789999999998479943067
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGI 127 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~ 127 (475)
..++.|+...+++..+|-.|-|.+-. -+.+...|+.++.-
T Consensus 176 ~Tl~~lL~~~~~~~~vvl~GPS~p~~----P~~l~~~Gv~~lag 215 (229)
T pfam04016 176 GTLERLLALARKAAEVVLVGPSAPLL----PEALFGYGVDVLAG 215 (229)
T ss_pred CCHHHHHHHCCCCCEEEEECCCCCCC----HHHHHHCCCCEEEE
T ss_conf 89899997476587799989986357----78996389767867
No 444
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=92.44 E-value=0.94 Score=25.11 Aligned_cols=90 Identities=17% Similarity=0.155 Sum_probs=60.5
Q ss_pred CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCC-EECCCHHHHHHHCCCCCEEEEE-----CCCHHHHHH
Q ss_conf 5711168899999789859997399899999997122112784-0328989998605778899997-----699069999
Q gi|254780716|r 11 LGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKV-IVTKNLEQMVEAVCKPRKILMM-----VTDGDPVDQ 84 (475)
Q Consensus 11 LG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~-~~~~s~~e~v~~l~~pr~Iil~-----vp~g~~v~~ 84 (475)
.|-=|..++..+++.|..|.+-|.+++.++-...+.....-.+ ..+.+.+|+...-.+-++|+.| ||+. ++
T Consensus 66 vGCGgG~Lse~mAr~Ga~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~~~~edl~~~~~~FDvV~cmEVlEHv~dp---~~ 142 (243)
T COG2227 66 VGCGGGILSEPLARLGASVTGIDASEKPIEVAKLHALESGVNIDYRQATVEDLASAGGQFDVVTCMEVLEHVPDP---ES 142 (243)
T ss_pred ECCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEHHHHHCCCCH---HH
T ss_conf 458832864999977994697438767789998754424632252233299997248974489773587716999---99
Q ss_pred HHHHHHHCCCCCCEEEECC
Q ss_conf 9999972078998999679
Q gi|254780716|r 85 LIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 85 vi~~l~~~l~~g~iiID~s 103 (475)
++......++||-++...+
T Consensus 143 ~~~~c~~lvkP~G~lf~ST 161 (243)
T COG2227 143 FLRACAKLVKPGGILFLST 161 (243)
T ss_pred HHHHHHHHCCCCCEEEEEC
T ss_conf 9999998629992899942
No 445
>PRK06196 oxidoreductase; Provisional
Probab=92.40 E-value=0.95 Score=25.07 Aligned_cols=69 Identities=13% Similarity=0.164 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHC
Q ss_conf 11168899999789859997399899999997122112784032898999860577889999769906999999999720
Q gi|254780716|r 13 SMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQLIDKLKPL 92 (475)
Q Consensus 13 ~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi~~l~~~ 92 (475)
=+|...|+.|++.|.+|++-.|++++.++.+++-. +..++-+-+.+-+.|.+..+++...
T Consensus 37 GIG~~tA~~La~~Ga~Vil~~R~~~k~~~a~~~i~--------------------~~~~~~lDLs~~~sVr~~a~~~~~~ 96 (316)
T PRK06196 37 GLGLETTRALAQAGAHVVVPARRPDAAREALAGID--------------------GVEVVALDLADLASVRAFAERFLDS 96 (316)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHC--------------------CCCEEECCCCCHHHHHHHHHHHHHH
T ss_conf 79999999999789989999499999999998741--------------------7857983688999999999999975
Q ss_pred CCCCCEEEE
Q ss_conf 789989996
Q gi|254780716|r 93 LSPEDILLD 101 (475)
Q Consensus 93 l~~g~iiID 101 (475)
..+=|++|.
T Consensus 97 ~~~lDvLIn 105 (316)
T PRK06196 97 GRRIDILIN 105 (316)
T ss_pred CCCCEEEEE
T ss_conf 798329995
No 446
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=92.38 E-value=0.95 Score=25.06 Aligned_cols=68 Identities=16% Similarity=0.265 Sum_probs=43.4
Q ss_pred EEEEEECCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHH---CCCC--CCCC-EECCCHHHHHHHCCCCCEEEEEC
Q ss_conf 05698157111688999997898--599973998999999971---2211--2784-03289899986057788999976
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGF--RLAVYNKDFELTDVFIKK---ISGL--SQKV-IVTKNLEQMVEAVCKPRKILMMV 76 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~--~V~vydr~~~~~~~l~~~---~~~~--~~~~-~~~~s~~e~v~~l~~pr~Iil~v 76 (475)
+|++||.|..|.++|..|+.+|. ++..||+++++++..+.. .... .... ....+.++ +...++|+++.
T Consensus 1 KI~IIGaG~VG~~~A~~l~~~~~~~elvL~Di~~~~a~g~a~Dl~h~~~~~~~~~~~~~~~~y~~----~~~aDiVVita 76 (307)
T cd05290 1 KLVVIGAGHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGDYDD----CADADIIVITA 76 (307)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEECCCCHHH----HCCCCEEEECC
T ss_conf 98999969899999999985699887999928898237999987612035899865866799899----46999999867
No 447
>PRK08628 short chain dehydrogenase; Provisional
Probab=92.38 E-value=0.96 Score=25.05 Aligned_cols=81 Identities=15% Similarity=0.307 Sum_probs=52.4
Q ss_pred EEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 5698--15711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 6 IGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 6 IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
+.+| |-+-+|..+|+.|++.|..|.+++|+.+..+ ..++...... +...+-.-|.+.+.++
T Consensus 9 valVTG~s~GIG~a~a~~la~~Ga~v~i~~~~~~~~~-~~~~~~~~~~----------------~~~~~~~Dvs~~~~v~ 71 (258)
T PRK08628 9 VVIVTGGASGIGAAISLRLAEEGAIPVVFGRSAPDDE-FAEELRALQP----------------RAEFVQVDLQDDAQCR 71 (258)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCHHH-HHHHHHHCCC----------------CEEEEEEECCCHHHHH
T ss_conf 8999277778999999999987998999808802399-9999995399----------------7899995279999999
Q ss_pred HHHHHHHHCCCCCCEEEECC
Q ss_conf 99999972078998999679
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~s 103 (475)
+.++++.....+=|++|...
T Consensus 72 ~~v~~~~~~~g~iDiLVnnA 91 (258)
T PRK08628 72 DAVAQTVAKFGRIDGLVNNA 91 (258)
T ss_pred HHHHHHHHHHCCCCEEEECC
T ss_conf 99999999829988999888
No 448
>PRK06444 prephenate dehydrogenase; Provisional
Probab=92.37 E-value=0.96 Score=25.04 Aligned_cols=103 Identities=14% Similarity=0.157 Sum_probs=67.1
Q ss_pred EEE-ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHH
Q ss_conf 698-1571116889999978985999739989999999712211278403289899986057788999976990699999
Q gi|254780716|r 7 GII-GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQL 85 (475)
Q Consensus 7 GiI-GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~v 85 (475)
++| |.|.||+=++.=|..+|+.|++- +.++|+++||=. +..++
T Consensus 4 ~iig~~gr~g~~~~~~~~~~g~~v~i~-----------------------------------k~D~ifiaVPI~-~~~~i 47 (197)
T PRK06444 4 IIIGKNGRLGRVLCSILDDNGLGVYIK-----------------------------------KADHAFLSVPID-AALNY 47 (197)
T ss_pred EEECCCCCHHHHHHHHHCCCCCEEEEC-----------------------------------CCCEEEEEEEHH-HHHHH
T ss_conf 996378716689999970378478972-----------------------------------788899982458-88999
Q ss_pred HHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCC--CC-EEEE--ECCHHHHHHHHHHHH
Q ss_conf 99997207899899967986578999999999847994306754676000356--84-3788--454899988899999
Q gi|254780716|r 86 IDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGVKGARS--GA-SLMV--GGNEKAYNRVENILL 159 (475)
Q Consensus 86 i~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~~gA~~--G~-slMv--GG~~~~~~~~~piL~ 159 (475)
++ ++|.++||.+..-+. .++.+...+..----||..... +. .+|+ =+.++.++..+.+|+
T Consensus 48 I~------~~~~tiiDv~SVK~p--------~k~~~~~IIs~HPMFGPdS~~~~~~~~vi~v~d~~~~~~~~~~k~lF~ 112 (197)
T PRK06444 48 IE------SYDNNFVEISSVKWP--------FKKYSGKIVSIHPLFGPMSYNDGVHRTVIFINDISRDNYLNEINEMFR 112 (197)
T ss_pred HH------HCCCEEEEEEECCCH--------HHHHCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHC
T ss_conf 98------479738998863311--------777079879879987988531247876999725887779999999828
No 449
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase; InterPro: IPR010110 This entry represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.; GO: 0004764 shikimate 5-dehydrogenase activity, 0005737 cytoplasm.
Probab=92.32 E-value=0.42 Score=27.67 Aligned_cols=86 Identities=17% Similarity=0.263 Sum_probs=54.6
Q ss_pred EEECCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHCCCCCCCCEECCCHH-HH-HHHCCCCCEEEEECCCHHHHHH
Q ss_conf 98157111688999997898-599973998999999971221127840328989-99-8605778899997699069999
Q gi|254780716|r 8 IIGLGSMGSNLSLNILDKGF-RLAVYNKDFELTDVFIKKISGLSQKVIVTKNLE-QM-VEAVCKPRKILMMVTDGDPVDQ 84 (475)
Q Consensus 8 iIGLG~MG~~mA~nL~~~G~-~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~-e~-v~~l~~pr~Iil~vp~g~~v~~ 84 (475)
+||-|=--.+=.--|++-|. ++++-||+++|.++|++-+.... .+...+.+. +. ...++..++.+.|||++.+.|.
T Consensus 135 viGaGGtsrAA~yaL~sLG~~~I~~inR~~dKl~~L~~~~~~~~-~i~~~e~l~~~~~~i~v~~~~v~vStvPaD~p~d~ 213 (291)
T TIGR01809 135 VIGAGGTSRAAVYALASLGVKDIYVINRSKDKLKKLVDLLVSEF-VIIRLESLDKELEEIEVKDVEVAVSTVPADKPLDD 213 (291)
T ss_pred EECCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCC-EEEEEECCCCCCCCCEEEEEEEEEEECCCCCCCCH
T ss_conf 88387214899999986699706997358667668877413561-35665101334110202456788861578864688
Q ss_pred HH-HHHHHCCC
Q ss_conf 99-99972078
Q gi|254780716|r 85 LI-DKLKPLLS 94 (475)
Q Consensus 85 vi-~~l~~~l~ 94 (475)
+. +.+.+.|-
T Consensus 214 ~~l~~~~~fl~ 224 (291)
T TIGR01809 214 EVLEALKRFLL 224 (291)
T ss_pred HHHHHHHHHHH
T ss_conf 89999989875
No 450
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=92.25 E-value=0.23 Score=29.55 Aligned_cols=34 Identities=15% Similarity=0.366 Sum_probs=31.3
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHH
Q ss_conf 8056981571116889999978985999739989
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFE 37 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~ 37 (475)
.+|++||-|.-|..-|..|+++||+|.+|++.+.
T Consensus 138 kkVAVIGaGPAGLsaA~~La~~G~~VtVfE~~~~ 171 (560)
T PRK12771 138 KRVAVIGGGPAGLSAAYQLRRLGHAVTIFEAGPK 171 (560)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCC
T ss_conf 9899989778999999999976985899676788
No 451
>PRK13984 putative oxidoreductase; Provisional
Probab=92.22 E-value=0.21 Score=29.84 Aligned_cols=34 Identities=21% Similarity=0.437 Sum_probs=31.3
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHH
Q ss_conf 8056981571116889999978985999739989
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFE 37 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~ 37 (475)
.+|++||-|--|..-|..|++.||+|.||++.+.
T Consensus 284 KKVAVIGsGPAGLaaA~~Lar~Gh~VtVFE~~~~ 317 (604)
T PRK13984 284 KKVAIVGSGPAGLSAAYFLATMGYEVEVYESLSK 317 (604)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCC
T ss_conf 9899989868999999999986986899745677
No 452
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=92.18 E-value=1 Score=24.89 Aligned_cols=71 Identities=23% Similarity=0.308 Sum_probs=43.7
Q ss_pred CCCCEEEEEE-CCHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHHCCCC--CCCCEECCCHHHHHH-HCCCCCEEEEE
Q ss_conf 9988056981-57111688999997-8985999739989999999712211--278403289899986-05778899997
Q gi|254780716|r 1 MKQADIGIIG-LGSMGSNLSLNILD-KGFRLAVYNKDFELTDVFIKKISGL--SQKVIVTKNLEQMVE-AVCKPRKILMM 75 (475)
Q Consensus 1 M~k~~IGiIG-LG~MG~~mA~nL~~-~G~~V~vydr~~~~~~~l~~~~~~~--~~~~~~~~s~~e~v~-~l~~pr~Iil~ 75 (475)
|+| |=+.| .|-.|++++..|++ .+++|.+.|+..++.+.+.....-. ...+ ..+ .++++ .+.++++|+=+
T Consensus 1 MKk--ILVTGgaGFIGs~Lv~~Ll~~~~~~V~~~d~~~~~~~~~~~~~~~~~~~gDi--~~~-~~~~~~~~~~~D~V~Hl 75 (347)
T PRK11908 1 MKK--VLILGVNGFIGHHLTKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDI--TIN-KEWIEYHVKKCDVVLPL 75 (347)
T ss_pred CCE--EEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHCCCCCEEEEECCC--CCC-HHHHHHHHCCCCEEEEE
T ss_conf 988--9997574389999999999828978999979976367755799859997754--469-99999766059889752
Q ss_pred C
Q ss_conf 6
Q gi|254780716|r 76 V 76 (475)
Q Consensus 76 v 76 (475)
-
T Consensus 76 A 76 (347)
T PRK11908 76 V 76 (347)
T ss_pred H
T ss_conf 0
No 453
>PRK06475 salicylate hydroxylase; Provisional
Probab=92.17 E-value=0.19 Score=30.30 Aligned_cols=36 Identities=25% Similarity=0.456 Sum_probs=32.8
Q ss_pred CCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHH
Q ss_conf 988056981571116889999978985999739989
Q gi|254780716|r 2 KQADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFE 37 (475)
Q Consensus 2 ~k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~ 37 (475)
++.+|-|||-|.-|..+|.-|.++|++|.+|++.++
T Consensus 1 tr~~VlIVGaGiaGL~~A~~L~~~G~~v~V~E~~~~ 36 (400)
T PRK06475 1 TRGSILIAGAGVAGLSAALELAARGWAVTIIEKAQE 36 (400)
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEECCCCC
T ss_conf 999799989588999999999978999999917998
No 454
>PRK07208 hypothetical protein; Provisional
Probab=92.12 E-value=0.26 Score=29.26 Aligned_cols=187 Identities=16% Similarity=0.166 Sum_probs=89.4
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHH
Q ss_conf 99880569815711168899999789859997399899999997122112784032898999860577889999769906
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGD 80 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~ 80 (475)
|.|.+|-|||-|.-|...|..|.++|++|.|++++..- | +...+. +.+.+.=. -.|.+++ ...+
T Consensus 1 ~~~kkv~IiGAG~~GL~aA~~L~~~g~~v~vlEk~~~v-------G-Gl~~t~----~~~G~~~d-~G~H~f~---s~~~ 64 (474)
T PRK07208 1 TEKKSVVIIGAGPAGLTAAYELVKRGYPVTILEADPEV-------G-GISRTV----TYKGYRFD-IGGHRFF---TKSE 64 (474)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCC-------C-CEEEEE----EECCEEEE-ECCCEEC---CCCH
T ss_conf 99875999897689999999998689975999789987-------5-447788----98998998-4780548---8975
Q ss_pred HHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHH
Q ss_conf 99999999972078998999679865789999999998479943067546760003568437884548999888999998
Q gi|254780716|r 81 PVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGVKGARSGASLMVGGNEKAYNRVENILLS 160 (475)
Q Consensus 81 ~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~~gA~~G~slMvGG~~~~~~~~~piL~~ 160 (475)
.+.+.++++++ ++-++... |. ...- .+-.|++-|++.... ... . |..+....+..++.+
T Consensus 65 ~v~~~~~~ll~----~~~~~~~~--------r~-s~i~-~~g~~~~yP~~~~~~--l~~----l-~~~~~~~~~~~~~~~ 123 (474)
T PRK07208 65 EVMDLWNEILP----DDDFLLRP--------RL-SRIY-YRGKFFDYPLKAFDA--LKN----L-GLKESALCVASYLKA 123 (474)
T ss_pred HHHHHHHHHCC----CCEEEECC--------CC-EEEE-ECCEEEECCCCHHHH--HHH----C-CHHHHHHHHHHHHHH
T ss_conf 99999998528----77179713--------63-6999-999899249895788--642----7-862789999999875
Q ss_pred HHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH---HHHHHHH--HHHHHCCCCHHHHHHHHHHCCCCCC-CHHHHH
Q ss_conf 750156786189856987467898877678788899---9899999--9996428997899999986068844-307999
Q gi|254780716|r 161 ISAKYQNSPCCALLGPDGSGHFVKMIHNGIEYANMQ---LIADIYG--ILRDSLNKNPLEISHLFSKWDTGKL-SSYLIK 234 (475)
Q Consensus 161 iaak~~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq---~iaE~~~--~l~~~~~~~~~~i~~vf~~w~~~~~-~syLl~ 234 (475)
-..+.. -+. |-=|+...+ -++|.|. +.++.-+.++++|+.- |-..-+ ..-|.+
T Consensus 124 ~~~~~~--------~~~----------nfee~~~~~fG~~l~~~f~~pYt~K~Wg~~~~eLs~~---wa~~Rv~~~~l~~ 182 (474)
T PRK07208 124 RLRPIK--------EEK----------SFEDWVINRFGRRLYSIFFKTYTEKVWGIPCDEISAD---WAAQRIKGLSLGK 182 (474)
T ss_pred HHCCCC--------CCC----------CHHHHHHHHHCHHHHHHHHHHHHHCHHCCCHHHCCHH---HHHHHCCCCCHHH
T ss_conf 304888--------877----------9999999976889999999875212206894776968---8832225789899
Q ss_pred HHHHHHHHCCC
Q ss_conf 99999974056
Q gi|254780716|r 235 ITAEILSSSDT 245 (475)
Q Consensus 235 i~~~il~~k~~ 245 (475)
+....+..+++
T Consensus 183 ~i~~~~~~~~~ 193 (474)
T PRK07208 183 AIRRALRPKNN 193 (474)
T ss_pred HHHHHHCCCCC
T ss_conf 99873254445
No 455
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=92.01 E-value=1 Score=24.75 Aligned_cols=21 Identities=10% Similarity=0.150 Sum_probs=13.6
Q ss_pred CCCCCCHHHHHHHHHHHHCCC
Q ss_conf 336587167789887751788
Q gi|254780716|r 258 KASQKGTGIRSIIEGHKLSSS 278 (475)
Q Consensus 258 ~~~~kgTg~Wt~~~a~~lgvp 278 (475)
..+.-+.|.+++|.|-.+|..
T Consensus 172 V~G~G~iGl~a~~~ak~~Ga~ 192 (349)
T TIGR03201 172 VIGAGGVGGYMVQTAKAMGAA 192 (349)
T ss_pred EECCCHHHHHHHHHHHHCCCE
T ss_conf 989748999999999985997
No 456
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=91.95 E-value=1.1 Score=24.70 Aligned_cols=19 Identities=16% Similarity=0.344 Sum_probs=13.5
Q ss_pred CCCCHHHHHHHHHHHHCCC
Q ss_conf 6587167789887751788
Q gi|254780716|r 260 SQKGTGIRSIIEGHKLSSS 278 (475)
Q Consensus 260 ~~kgTg~Wt~~~a~~lgvp 278 (475)
..-|.|..++|-|-.+|.-
T Consensus 171 a~G~vG~~aiqlak~~Ga~ 189 (332)
T PRK13771 171 AGGGVGIHAVQVAKAYGAK 189 (332)
T ss_pred CCCHHHHHHHHHHHHCCCE
T ss_conf 8775899999999986998
No 457
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=91.86 E-value=1.1 Score=24.64 Aligned_cols=135 Identities=15% Similarity=0.217 Sum_probs=81.3
Q ss_pred ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCC--CCCEE-CCCHHHHHHHC-CCCCEEEEECCCHHHHHHH
Q ss_conf 15711168899999789859997399899999997122112--78403-28989998605-7788999976990699999
Q gi|254780716|r 10 GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLS--QKVIV-TKNLEQMVEAV-CKPRKILMMVTDGDPVDQL 85 (475)
Q Consensus 10 GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~--~~~~~-~~s~~e~v~~l-~~pr~Iil~vp~g~~v~~v 85 (475)
|-|.++--+|+.. ..+-.|+..+++++..+-..++....+ .++.. ..+.-+....+ +.|+.||+-=. +...+++
T Consensus 50 GsGsvsiEaa~~~-~~~~~V~aIE~~~e~~~~~~~N~~kfg~~~nv~~i~G~ap~~l~~l~p~pD~vFIGG~-~g~l~~i 127 (198)
T PRK00377 50 GTGSVSVEAALIV-GEGGKVYAIDKDELAVELTKKNAEKFGVGDNVVLIEGEAPEVLPKLNPKSDRYFIGGG-GEELPEI 127 (198)
T ss_pred CEEHHHHHHHHHC-CCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHCCCCCCCEEEEECC-CCCHHHH
T ss_conf 0329999999966-9787599996788899999999998099988599952548877208998898999788-7778999
Q ss_pred HHHHHHCCCCCC-EEEECCCCCHHHHHHHHHHHHHCCC--CEECCCCCCCCC------CCCCCCEEEEECCH
Q ss_conf 999972078998-9996798657899999999984799--430675467600------03568437884548
Q gi|254780716|r 86 IDKLKPLLSPED-ILLDGGNSHFCDTQIRSLQLSEKGI--YFIGIGVSGGVK------GARSGASLMVGGNE 148 (475)
Q Consensus 86 i~~l~~~l~~g~-iiID~sts~~~~t~~~~~~l~~kgi--~fid~pVSGG~~------gA~~G~slMvGG~~ 148 (475)
++.+...|.+|. +|+.. ...+...+..+.+++.|. ..+-.-||-+.. -.-.-|-+++.|.+
T Consensus 128 l~~~~~~L~~gGriVina--Vtlet~~~~~~~l~~~~~~~ev~qv~vsr~~~lg~~~~~~~~NPV~ii~~~K 197 (198)
T PRK00377 128 IQAALEKIGKGGRIVADA--ILLESLNKALSALEELGYKYEVTEVIIAKGMKTGKGTAMIARNPIFIITGEK 197 (198)
T ss_pred HHHHHHHCCCCCEEEEEE--ECHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCEEECCCCEEEEEEEC
T ss_conf 999998579998999983--6298899999999976998149999946473257876660689979999978
No 458
>PRK12810 gltD glutamate synthase subunit beta; Reviewed
Probab=91.83 E-value=0.3 Score=28.79 Aligned_cols=33 Identities=18% Similarity=0.469 Sum_probs=30.9
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCH
Q ss_conf 805698157111688999997898599973998
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDF 36 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~ 36 (475)
.+|++||-|-=|..-|..|++.||+|.+|++.+
T Consensus 144 kkVAVIGsGPAGLsaA~~Lar~G~~VtVfE~~~ 176 (472)
T PRK12810 144 KKVAVVGSGPAGLAAADQLARAGHKVTVFERDD 176 (472)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf 989998977899999999986697589972577
No 459
>pfam00743 FMO-like Flavin-binding monooxygenase-like. This family includes FMO proteins and cyclohexanone monooxygenase.
Probab=91.81 E-value=0.27 Score=29.13 Aligned_cols=34 Identities=18% Similarity=0.420 Sum_probs=31.3
Q ss_pred EEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHH
Q ss_conf 0569815711168899999789859997399899
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFEL 38 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~ 38 (475)
.|+|||-|.-|...+++|++.|+++.+|+++.+-
T Consensus 3 rVAIIGAG~SGL~a~K~lle~G~~~~~FE~~~~i 36 (532)
T pfam00743 3 KVAVIGAGVSGLSSIKCCLEEGLEPTCFERSDDI 36 (532)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf 7999897299999999998779982999779997
No 460
>PRK07856 short chain dehydrogenase; Provisional
Probab=91.74 E-value=0.71 Score=26.00 Aligned_cols=73 Identities=19% Similarity=0.274 Sum_probs=52.5
Q ss_pred EEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 5698--15711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 6 IGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 6 IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
+.+| |-+-+|..+|+.|++.|.+|.+.+|+..... + .. +..+-.-|.+.+.++
T Consensus 10 ~alITGgs~GIG~aia~~la~~Ga~V~i~~r~~~~~~-----~----~~----------------~~~~~~Dv~~~~~v~ 64 (254)
T PRK07856 10 VVLVTGGTRGVGAGISEAFLAAGATVVVCGRRAPEVD-----G----RP----------------AEFHACDIRDPDQVA 64 (254)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHCC-----C----CC----------------EEEEECCCCCHHHHH
T ss_conf 8999476768999999999987999999979855748-----9----84----------------399984699999999
Q ss_pred HHHHHHHHCCCCCCEEEECC
Q ss_conf 99999972078998999679
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~s 103 (475)
++++.+......=|++|...
T Consensus 65 ~~~~~~~~~~g~iDilVnNA 84 (254)
T PRK07856 65 ALVDAIAERHGRLDVLVNNA 84 (254)
T ss_pred HHHHHHHHHHCCCCEEEECC
T ss_conf 99999999809988899889
No 461
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=91.69 E-value=1.1 Score=24.50 Aligned_cols=80 Identities=18% Similarity=0.161 Sum_probs=50.8
Q ss_pred EEEEECC---HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 5698157---1116889999978985999739989999999712211278403289899986057788999976990699
Q gi|254780716|r 6 IGIIGLG---SMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 6 IGiIGLG---~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
+=+.|-| -.|..+|+.|++.|.+|.+..|+.+..+...+. .+.....-.+-.-|.+.+.+
T Consensus 10 alITGaa~~~GIG~aiA~~La~~GA~V~i~~~~e~~~~~~~~~-----------------~~~~g~~~~~~~Dvsd~~~v 72 (271)
T PRK06505 10 GLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGDALGKRVKPL-----------------AESLGSDLVLPCDVEDIASV 72 (271)
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-----------------HHHCCCCEEEECCCCCHHHH
T ss_conf 9997999985499999999998699999981866889999999-----------------99649818998379999999
Q ss_pred HHHHHHHHHCCCCCCEEEEC
Q ss_conf 99999997207899899967
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLDG 102 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID~ 102 (475)
+.+++.+.....+=|++|..
T Consensus 73 ~~~v~~~~~~~G~iDiLVnn 92 (271)
T PRK06505 73 DAVFEALEKKWGKLDFVVHA 92 (271)
T ss_pred HHHHHHHHHHHCCCCEEEEC
T ss_conf 99999999983998789856
No 462
>PRK08013 hypothetical protein; Provisional
Probab=91.67 E-value=0.28 Score=29.00 Aligned_cols=36 Identities=28% Similarity=0.557 Sum_probs=34.0
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCH
Q ss_conf 998805698157111688999997898599973998
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDF 36 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~ 36 (475)
|++.+|-|||-|.-|..+|.-|++.|++|.+.++.+
T Consensus 1 M~~~DV~IvGaGpvGl~lA~~La~~G~~v~viE~~~ 36 (400)
T PRK08013 1 MQSVDVAIVGGGMVGLAVACGLQGSGLRVAVLEHRV 36 (400)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 996788999935999999999971899589991899
No 463
>PRK03815 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=91.66 E-value=1.1 Score=24.48 Aligned_cols=105 Identities=19% Similarity=0.144 Sum_probs=54.2
Q ss_pred EEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEE--CCCHHH
Q ss_conf 05698157111688999997898599973998999-999971221127840328989998605778899997--699069
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELT-DVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMM--VTDGDP 81 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~-~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~--vp~g~~ 81 (475)
+|.++|+|.-|.+.|+-|.++|..+.+-|+..+.. +++... .....++- .+..+.|+.+ +|...+
T Consensus 2 Ki~V~GlG~sG~s~a~~L~~~g~~~i~dD~~~~~~~~~~~~~----------~~~~~~~~--~~~~d~vv~SPGI~~~~p 69 (401)
T PRK03815 2 KISLFGYGKTTKALARFFVKNGGVDIYDDKFTEPKKDEEGNL----------LLPSNDFD--PNKSDLEIPSPGIPPSHP 69 (401)
T ss_pred EEEEEEECHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHCC----------CCCHHHCC--CHHCCEEEECCCCCCCCH
T ss_conf 399984777189999999948797999899986222464040----------06843358--012868998998599879
Q ss_pred -HH---HHHH--HHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCC
Q ss_conf -99---9999--9972078998999679865789999999998479
Q gi|254780716|r 82 -VD---QLID--KLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKG 121 (475)
Q Consensus 82 -v~---~vi~--~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kg 121 (475)
+. +++. ++.-...+..|.|-+||.--..|.-....|++.|
T Consensus 70 ~~~~a~~i~seiel~~~~~~~~I~ITGTNGKsTtt~li~~iL~~~g 115 (401)
T PRK03815 70 LIQKAKNLISEYDYFYSFMPFSIWISGTNGKTTTTQMLTHLLEDFG 115 (401)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCC
T ss_conf 9998745414999998527874899847777899999999998669
No 464
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=91.65 E-value=0.26 Score=29.27 Aligned_cols=33 Identities=18% Similarity=0.417 Sum_probs=30.9
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCH
Q ss_conf 805698157111688999997898599973998
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDF 36 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~ 36 (475)
.+|++||-|-=|..-|..|+++||+|.||++.+
T Consensus 311 kKVAVIGsGPAGLaaA~~Lar~G~~VTVfE~~~ 343 (639)
T PRK12809 311 EKVAVIGAGPAGLGCADILARAGVQVDVFDRHP 343 (639)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 989998975899999999997599069993688
No 465
>COG1233 Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=91.65 E-value=0.34 Score=28.32 Aligned_cols=36 Identities=25% Similarity=0.367 Sum_probs=33.2
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCH
Q ss_conf 998805698157111688999997898599973998
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDF 36 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~ 36 (475)
|+..++-|||-|.=|..-|..|+++|++|.|+.++.
T Consensus 1 ~~~~dvvVIGaG~~GL~aAa~LA~~G~~V~VlE~~~ 36 (487)
T COG1233 1 MPMYDVVVIGAGLNGLAAAALLARAGLKVTVLEKND 36 (487)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf 997629998988789999999996899799996378
No 466
>PRK12831 putative oxidoreductase; Provisional
Probab=91.61 E-value=0.3 Score=28.77 Aligned_cols=33 Identities=18% Similarity=0.483 Sum_probs=30.9
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCH
Q ss_conf 805698157111688999997898599973998
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDF 36 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~ 36 (475)
.+|++||-|-=|..-|..|++.||+|.+|++.+
T Consensus 141 kkVAVIGsGPAGLsaA~~La~~G~~VtVfE~~~ 173 (464)
T PRK12831 141 KKVAVIGSGPAGLTCAGDLAKKGYDVTIFEALH 173 (464)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEECCCC
T ss_conf 989998976899999999997699179982788
No 467
>PRK05868 hypothetical protein; Validated
Probab=91.44 E-value=0.22 Score=29.74 Aligned_cols=35 Identities=14% Similarity=0.270 Sum_probs=32.4
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHH
Q ss_conf 9988056981571116889999978985999739989
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFE 37 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~ 37 (475)
|+| |-|+|-|.=|..+|.-|.+.|++|.|+.|.++
T Consensus 1 ~~k--VlIvGaGiAGlalA~~L~r~G~~VtV~Er~p~ 35 (372)
T PRK05868 1 MKT--VLVSGASVAGTAAAYWLGRHGYSVTMVERHPG 35 (372)
T ss_pred CCE--EEEECCCHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf 999--99989888999999999858998899957999
No 468
>PRK08303 short chain dehydrogenase; Provisional
Probab=91.37 E-value=1.2 Score=24.27 Aligned_cols=91 Identities=11% Similarity=0.156 Sum_probs=52.5
Q ss_pred EEEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCC-CCEEEEECCCHHH
Q ss_conf 05698--15711168899999789859997399899999997122112784032898999860577-8899997699069
Q gi|254780716|r 5 DIGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCK-PRKILMMVTDGDP 81 (475)
Q Consensus 5 ~IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~-pr~Iil~vp~g~~ 81 (475)
++.+| +-.-+|..+|+.|++.|.+|++.+|+.+....-.+. ....+...+.+.+.-. .-.+-.-+.+.+.
T Consensus 9 KvAlVTGasrGIGraiA~~LA~~GA~V~i~~r~~~~~~~~~~~-------~e~l~e~a~~i~~~Gg~~~~v~~Dvsd~~~ 81 (305)
T PRK08303 9 KVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDR-------PETIEETAELVTAAGGRGIAVQVDHLVPEQ 81 (305)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCHHCCCCCCC-------HHHHHHHHHHHHHCCCEEEEEECCCCCHHH
T ss_conf 9899908875899999999998799899982761100000120-------679999999999759908999756899999
Q ss_pred HHHHHHHHHHCCCCCCEEEEC
Q ss_conf 999999997207899899967
Q gi|254780716|r 82 VDQLIDKLKPLLSPEDILLDG 102 (475)
Q Consensus 82 v~~vi~~l~~~l~~g~iiID~ 102 (475)
++++++.+.....+=||+|.-
T Consensus 82 v~~~v~~~~~~~G~lDILVNN 102 (305)
T PRK08303 82 VRALVERIDREQGRLDILVND 102 (305)
T ss_pred HHHHHHHHHHHCCCCCEEEEC
T ss_conf 999999999952962089855
No 469
>PRK08278 short chain dehydrogenase; Provisional
Probab=91.37 E-value=1.2 Score=24.27 Aligned_cols=88 Identities=18% Similarity=0.186 Sum_probs=52.3
Q ss_pred EEEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCE--EEEECCCHH
Q ss_conf 05698--15711168899999789859997399899999997122112784032898999860577889--999769906
Q gi|254780716|r 5 DIGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRK--ILMMVTDGD 80 (475)
Q Consensus 5 ~IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~--Iil~vp~g~ 80 (475)
++.+| |-+-+|..+|+.|++.|.+|.+.+|+.+..+++.... .+..+-+... ..+. +-.-|.+.+
T Consensus 7 KvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~l~~~~----------~~~a~e~~~~-g~~~~~~~~Dv~~~~ 75 (273)
T PRK08278 7 KTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTI----------HTAAAEIEAA-GGQALPLVGDVRDED 75 (273)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH----------HHHHHHHHHC-CCEEEEEECCCCCHH
T ss_conf 98999487659999999999987998999967722213345489----------9999999974-990899971179999
Q ss_pred HHHHHHHHHHHCCCCCCEEEECC
Q ss_conf 99999999972078998999679
Q gi|254780716|r 81 PVDQLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 81 ~v~~vi~~l~~~l~~g~iiID~s 103 (475)
.+++.++.+......=|++|...
T Consensus 76 ~v~~~v~~~~~~~G~iDiLVNNA 98 (273)
T PRK08278 76 QVAAAVAKTVERFGGIDICVNNA 98 (273)
T ss_pred HHHHHHHHHHHHHCCCCEEEECC
T ss_conf 99999999999859962999878
No 470
>PRK06185 hypothetical protein; Provisional
Probab=91.33 E-value=0.26 Score=29.21 Aligned_cols=37 Identities=27% Similarity=0.425 Sum_probs=33.3
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHH
Q ss_conf 9988056981571116889999978985999739989
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFE 37 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~ 37 (475)
|...+|-|||-|--|..+|.-|++.|++|.++++.++
T Consensus 4 ~~~tDV~IVGaGpaGL~lAl~Lar~Gi~V~VlEk~~~ 40 (409)
T PRK06185 4 VETTDCCIVGGGPAGMMLGLLLARAGVDVTVLEKHAD 40 (409)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEECCCCC
T ss_conf 8789989999188999999999977999999918999
No 471
>PRK05884 short chain dehydrogenase; Provisional
Probab=91.31 E-value=1.2 Score=24.23 Aligned_cols=36 Identities=14% Similarity=0.264 Sum_probs=30.5
Q ss_pred ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Q ss_conf 157111688999997898599973998999999971
Q gi|254780716|r 10 GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKK 45 (475)
Q Consensus 10 GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~ 45 (475)
|-+-+|.++|+.|++.|++|.+.+|++++.+...++
T Consensus 8 gs~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~e 43 (223)
T PRK05884 8 GDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKE 43 (223)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
T ss_conf 887999999999998799999995987899999853
No 472
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=91.26 E-value=1.2 Score=24.20 Aligned_cols=161 Identities=8% Similarity=0.122 Sum_probs=81.6
Q ss_pred CCCCEEEEEEC-CHHHHHHHHHHHHC-CCEEE-EE-ECCH--HHHHHHHH---HCC--CCCCCCEECCCHHHHHHHCCCC
Q ss_conf 99880569815-71116889999978-98599-97-3998--99999997---122--1127840328989998605778
Q gi|254780716|r 1 MKQADIGIIGL-GSMGSNLSLNILDK-GFRLA-VY-NKDF--ELTDVFIK---KIS--GLSQKVIVTKNLEQMVEAVCKP 69 (475)
Q Consensus 1 M~k~~IGiIGL-G~MG~~mA~nL~~~-G~~V~-vy-dr~~--~~~~~l~~---~~~--~~~~~~~~~~s~~e~v~~l~~p 69 (475)
|+|-+||+||- |--|..|.+-|..+ .+++. ++ .++. ++..++.. .+. ...... .+.++++. .++..
T Consensus 1 M~kikvaIvGatGy~G~ELirlL~~HP~~ei~~l~aS~~~aGk~~~~~~~~~~~~~~p~~~~~l-~~~~~~~~--~~~~~ 77 (350)
T PRK08664 1 MDKLKVGVLGATGLVGQRFVQLLANHPWFEVTALAASERSAGKTYGEAVRWQLDGPIPEEVADL-EVVSTDPV--DVDDV 77 (350)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCE-EEEECCHH--HHCCC
T ss_conf 9977799989842999999999970999668999965533788415520322346676444650-79868845--74389
Q ss_pred CEEEEECCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCC----CCCC-----CCCCCC
Q ss_conf 8999976990699999999972078998999679865789999999998479943067546----7600-----035684
Q gi|254780716|r 70 RKILMMVTDGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVS----GGVK-----GARSGA 140 (475)
Q Consensus 70 r~Iil~vp~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVS----GG~~-----gA~~G~ 140 (475)
++||+++|+|.+-+ +...+ ++.|..|||.|.-+.-+. .+.++-..+- ++.+ ..+++.
T Consensus 78 DvvF~AlPhg~s~~-~~~~l---~~~g~~VIDlSadfRl~~----------~~p~~~pE~n~~~~~~~~~~~~~~~~~~~ 143 (350)
T PRK08664 78 DIVFSALPSDVAAE-VEEEF---AKAGKPVFSNASAHRMDP----------DVPLVIPEVNPEHLELIEVQRKRRGWDGF 143 (350)
T ss_pred CEEEECCCCHHHHH-HHHHH---HHCCCEEEECCHHHCCCC----------CCCEECHHHCHHHHHHHHHHHHHCCCCCC
T ss_conf 99999898269999-99999---877988997862203557----------88445420388877346887764134665
Q ss_pred EEE-EECCHH-HHHHHHHHHHHHHCCCCCCCEEEEECCCCHHH
Q ss_conf 378-845489-99888999998750156786189856987467
Q gi|254780716|r 141 SLM-VGGNEK-AYNRVENILLSISAKYQNSPCCALLGPDGSGH 181 (475)
Q Consensus 141 slM-vGG~~~-~~~~~~piL~~iaak~~~~~cv~y~G~~GsGh 181 (475)
.+- +|+-.. +.-.+.|+++. +..+-....+-|-+|+|.
T Consensus 144 lIanPGCy~Ta~~LaL~PL~~~---~~~~i~i~~~sgvSGAGk 183 (350)
T PRK08664 144 IVTNPNCSTIGLTLALKPLMDF---GIERVHVTTMQAISGAGY 183 (350)
T ss_pred EEECCCCHHHHHHHHHHHHHHC---CCCEEEEEECCCCCCCCC
T ss_conf 7877971888999988999985---997599994443453661
No 473
>pfam04321 RmlD_sub_bind RmlD substrate binding domain. L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesized by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide.
Probab=91.24 E-value=1.3 Score=24.19 Aligned_cols=95 Identities=13% Similarity=0.190 Sum_probs=54.3
Q ss_pred EEE-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHH
Q ss_conf 981-5711168899999789859997399899999997122112784032898999860577889999769906999999
Q gi|254780716|r 8 IIG-LGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQLI 86 (475)
Q Consensus 8 iIG-LG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi 86 (475)
+.| -|-.|+++++.|.++|++|.+.+|..- .+.-...+++++... +|++|+-+-... .++...
T Consensus 3 VtG~~GfiGs~l~~~L~~~g~~v~~~~r~~~--------------D~~d~~~l~~~~~~~-~pd~VihlAa~~-~~~~~~ 66 (284)
T pfam04321 3 VTGANGQLGRELTRLLAERGVEVVALDRPEL--------------DLTDPEAVAALVREA-RPDVVVNAAAYT-AVDKAE 66 (284)
T ss_pred EECCCCHHHHHHHHHHHHCCCEEEEECCCCC--------------CCCCHHHHHHHHHHC-CCCEEEECCCCC-CCHHHH
T ss_conf 9648998999999999868998999548625--------------788999999999864-997999724135-556777
Q ss_pred HHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCC
Q ss_conf 999720789989996798657899999999984799430675
Q gi|254780716|r 87 DKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIG 128 (475)
Q Consensus 87 ~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~p 128 (475)
..-... -..+..-+..+.+.+++.+++|+=+-
T Consensus 67 ~~~~~~----------~~~Nv~~t~~l~~~~~~~~~~~i~~S 98 (284)
T pfam04321 67 SEPELA----------YAVNALGPGNLAEACAARGAPLIHIS 98 (284)
T ss_pred HCHHHH----------HHHHHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 488889----------98759999999999874498579841
No 474
>PRK06813 homoserine dehydrogenase; Validated
Probab=91.14 E-value=1 Score=24.86 Aligned_cols=103 Identities=15% Similarity=0.258 Sum_probs=53.3
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHC--------CCEE---EEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCC
Q ss_conf 9988056981571116889999978--------9859---9973998999999971221127840328989998605778
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDK--------GFRL---AVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKP 69 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~--------G~~V---~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~p 69 (475)
|. -+|+++|+|+.|+.+++-|.++ |.++ .+.|++....++ . .+ ++.++...-.
T Consensus 1 m~-i~I~l~G~G~VG~~~~~~l~~~~~~l~~~~g~~l~i~~i~~s~~~~~~~---~------g~----~~~~~l~~~~-- 64 (341)
T PRK06813 1 MK-IKVVLSGYGTVGREFIKLLNEKYLYINETYGIDLVVSGVLGRNVAIHNE---D------GL----SIHHLLRYGG-- 64 (341)
T ss_pred CE-EEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHCCC---C------CC----CHHHHHHCCC--
T ss_conf 96-0299995388999999999999999999749977999999686011376---6------88----8789875035--
Q ss_pred CEEEEECCCHHHHHHH----HHHHHHCCCCCCEEEECCCCCHHH---HHHHHHHHHHCCCCEECC
Q ss_conf 8999976990699999----999972078998999679865789---999999998479943067
Q gi|254780716|r 70 RKILMMVTDGDPVDQL----IDKLKPLLSPEDILLDGGNSHFCD---TQIRSLQLSEKGIYFIGI 127 (475)
Q Consensus 70 r~Iil~vp~g~~v~~v----i~~l~~~l~~g~iiID~sts~~~~---t~~~~~~l~~kgi~fid~ 127 (475)
....++.. .+.....--..+++||++-+.+.+ .......+-++|.+.+-+
T Consensus 65 --------~~~~~~~~~~~~~~~~~~~~~~~~i~vd~t~~~~~~~~~a~~~i~~al~~g~~VVTA 121 (341)
T PRK06813 65 --------GSAAIEKYIEHHPEERATDNISGTVLVESTVTNLKDGNPGKQYIKQAIEKQMDIVAI 121 (341)
T ss_pred --------CCHHHHHHHHHCHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEC
T ss_conf --------302355555423466630355676699911221357645899999999729968932
No 475
>PRK11749 putative oxidoreductase; Provisional
Probab=91.13 E-value=0.38 Score=28.01 Aligned_cols=34 Identities=18% Similarity=0.483 Sum_probs=31.2
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHH
Q ss_conf 8056981571116889999978985999739989
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFE 37 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~ 37 (475)
.+|++||-|--|..-|..|++.||+|.+|++.+.
T Consensus 141 kkVAIIGaGPAGLsAA~~Lar~G~~VtVfE~~~~ 174 (460)
T PRK11749 141 KKVAVIGAGPAGLTAAHRLARKGYDVTIFEARDK 174 (460)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf 9899989678999999999976984799704787
No 476
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=91.11 E-value=1.3 Score=24.10 Aligned_cols=73 Identities=12% Similarity=0.160 Sum_probs=52.3
Q ss_pred EEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 5698--15711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r 6 IGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 6 IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
+.+| |-+-+|.++|+.|++.|.+|.+.|+++++.+ ..++ ..+-.-|.+.+.++
T Consensus 11 valVTGgs~GIG~aia~~la~~Ga~V~~~d~~~~~~~---------~~~~----------------~~~~~Dvt~~~~v~ 65 (266)
T PRK06171 11 IIIVTGGSSGIGLAIVEELLAQGANVQMVDIHGGDEK---------HKGY----------------QFWPTDISSAKEVN 65 (266)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHCC---------CCCE----------------EEEECCCCCHHHHH
T ss_conf 7999477878999999999987999999978853505---------8976----------------99981699999999
Q ss_pred HHHHHHHHCCCCCCEEEECC
Q ss_conf 99999972078998999679
Q gi|254780716|r 84 QLIDKLKPLLSPEDILLDGG 103 (475)
Q Consensus 84 ~vi~~l~~~l~~g~iiID~s 103 (475)
+.++.+......=|++|...
T Consensus 66 ~~v~~~~~~~G~iDiLVNNA 85 (266)
T PRK06171 66 HTVAEIIERFGRIDGLVNNA 85 (266)
T ss_pred HHHHHHHHHHCCCCEEEECC
T ss_conf 99999999839988999888
No 477
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=91.11 E-value=0.33 Score=28.47 Aligned_cols=34 Identities=26% Similarity=0.462 Sum_probs=31.2
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHH
Q ss_conf 8056981571116889999978985999739989
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFE 37 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~ 37 (475)
.+|++||-|-=|..-|..|++.||+|.+|++.+.
T Consensus 328 KkVAIIGsGPAGLsaA~~Lar~G~~VTVFE~~~~ 361 (654)
T PRK12769 328 KRVAIIGAGPAGLACADVLTRNGVAVTVYDRHPE 361 (654)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCC
T ss_conf 9899989778999999999976975799525777
No 478
>PTZ00023 glyceraldehyde-3-phosphate dehydrogenase; Provisional
Probab=91.04 E-value=0.43 Score=27.59 Aligned_cols=165 Identities=22% Similarity=0.282 Sum_probs=85.6
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHH-CCCEEEEEEC---CHHHHHHHHHHCCC---CCCCCEECCCHHHHHHHCCCCCEEE
Q ss_conf 998805698157111688999997-8985999739---98999999971221---1278403289899986057788999
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILD-KGFRLAVYNK---DFELTDVFIKKISG---LSQKVIVTKNLEQMVEAVCKPRKIL 73 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~-~G~~V~vydr---~~~~~~~l~~~~~~---~~~~~~~~~s~~e~v~~l~~pr~Ii 73 (475)
|+- .||+=|+|+.|+.+.|.+.. ..++|.+-|- +.+...-+.+.-.. ....+....+ .+ .++..++-+
T Consensus 1 M~i-kigINGFGRIGR~v~R~~~~~~~i~vvaINd~~~~~~~~ayLlkyDS~hG~~~~~v~~~~~--~l--~i~~~~I~~ 75 (337)
T PTZ00023 1 MVV-KIGINGFGRIGRLVHRASLARENVEVVAINDPFMTPDYIKYLLKYDSVHGSLPCEVSVTSD--HL--MIGSKKVHL 75 (337)
T ss_pred CCE-EEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCEEEECC--EE--EECCEEEEE
T ss_conf 967-9999568778999999984189948999789999999999986536789989997898389--59--999978875
Q ss_pred EECCCHHHHHHHHHHHHHCCCC-CCEEEECCCCCHHHHHHHHHHHHHCCCC--EECCCCCCCCCCCCCCCEEEEECCHHH
Q ss_conf 9769906999999999720789-9899967986578999999999847994--306754676000356843788454899
Q gi|254780716|r 74 MMVTDGDPVDQLIDKLKPLLSP-EDILLDGGNSHFCDTQIRSLQLSEKGIY--FIGIGVSGGVKGARSGASLMVGGNEKA 150 (475)
Q Consensus 74 l~vp~g~~v~~vi~~l~~~l~~-g~iiID~sts~~~~t~~~~~~l~~kgi~--fid~pVSGG~~gA~~G~slMvGG~~~~ 150 (475)
+.-.++ .-+|.-+- -|+||||+-. |.+......-++ .|.. .+.+|..+ .-+++..|=+.+.
T Consensus 76 ~~~~dp--------~~ipW~~~gvDiViEcTG~-f~~~~~a~~Hl~-~GakkViiSAP~~d------~~~t~V~GVN~~~ 139 (337)
T PTZ00023 76 FFEKDP--------SQIPWGKNDVDVVAECTGV-FTSTEKAKLHLK-GGAKLVIISAPPSD------STPIYVFGVNHTQ 139 (337)
T ss_pred ECCCCH--------HHCCCCCCCCCEEEECCCC-CCCHHHHHHHHH-CCCCEEEECCCCCC------CCCEEEEECCHHH
T ss_conf 056996--------6699220398789962654-468899999987-69977997689988------8867998356343
Q ss_pred HHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHH--HHHHHHHHH
Q ss_conf 98889999987501567861898569874678988776--787888999
Q gi|254780716|r 151 YNRVENILLSISAKYQNSPCCALLGPDGSGHFVKMIHN--GIEYANMQL 197 (475)
Q Consensus 151 ~~~~~piL~~iaak~~~~~cv~y~G~~GsGh~vKMVhN--gIey~~mq~ 197 (475)
|+.-..++..-+..+ ..-.-.+|.+|. |||.|.|..
T Consensus 140 ~~~~~~IISnASCTT-----------NclAPl~kvL~~~fgI~~g~mTT 177 (337)
T PTZ00023 140 YDKSQRIVSNASCTT-----------NCLAPLAKVINDNFGIVEGLMTT 177 (337)
T ss_pred CCCCCCEEECCCCCC-----------CCHHHHHHHHHHHCCEEEEEEEE
T ss_conf 487672896563100-----------30030798786534867878998
No 479
>COG0665 DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]
Probab=90.96 E-value=0.42 Score=27.66 Aligned_cols=36 Identities=22% Similarity=0.339 Sum_probs=32.4
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCH
Q ss_conf 998805698157111688999997898599973998
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDF 36 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~ 36 (475)
+++.+|.|||-|..|...|..|++.|.+|.++++..
T Consensus 2 ~~~~~vvIIGgGi~Gls~A~~La~~G~~V~vie~~~ 37 (387)
T COG0665 2 SMKMDVVIIGGGIVGLSAAYYLAERGADVTVLEAGE 37 (387)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf 976439998986999999999997699199991798
No 480
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=90.95 E-value=1.3 Score=23.99 Aligned_cols=81 Identities=16% Similarity=0.264 Sum_probs=51.7
Q ss_pred EEEEE-EC-C--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHH
Q ss_conf 05698-15-7--11168899999789859997399899999997122112784032898999860577889999769906
Q gi|254780716|r 5 DIGII-GL-G--SMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGD 80 (475)
Q Consensus 5 ~IGiI-GL-G--~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~ 80 (475)
++.+| |- | -+|.++|+.|++.|.+|.+.+|+.. .++.+++ +.+.+....++-.-|.+.+
T Consensus 6 K~alITGaag~~GIG~aiA~~la~~GA~V~i~~~~~~-~~~~~~~----------------l~~~~g~~~~~~~Dvs~~~ 68 (274)
T PRK08415 6 KKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNDA-LKKRVEP----------------IAQELGSPYVYELDVSKEE 68 (274)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHH-HHHHHHH----------------HHHHCCCCEEEEECCCCHH
T ss_conf 8799989999837999999999986999999848878-9999999----------------9986299769990289999
Q ss_pred HHHHHHHHHHHCCCCCCEEEEC
Q ss_conf 9999999997207899899967
Q gi|254780716|r 81 PVDQLIDKLKPLLSPEDILLDG 102 (475)
Q Consensus 81 ~v~~vi~~l~~~l~~g~iiID~ 102 (475)
.++++++.+......=|++|..
T Consensus 69 ~v~~~~~~i~~~~G~iDilVnn 90 (274)
T PRK08415 69 HFKSLAESIKKDLGEIDFIVHS 90 (274)
T ss_pred HHHHHHHHHHHHHCCCCEEEEC
T ss_conf 9999999999985898888533
No 481
>PRK08850 2-octaprenyl-6-methoxyphenol hydroxylase; Validated
Probab=90.94 E-value=0.42 Score=27.68 Aligned_cols=35 Identities=34% Similarity=0.573 Sum_probs=31.6
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECC
Q ss_conf 99880569815711168899999789859997399
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGFRLAVYNKD 35 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~ 35 (475)
|++.+|-|||-|.-|..+|.-|++.|++|.++++.
T Consensus 2 ~~~~DV~IvGaGp~Gl~lA~~La~~G~~v~viE~~ 36 (405)
T PRK08850 2 MQSVDVAIIGGGMVGLALAAALKDSDLRIAVIEGQ 36 (405)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 99876899991589999999998589978999379
No 482
>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional
Probab=90.94 E-value=0.4 Score=27.85 Aligned_cols=33 Identities=24% Similarity=0.541 Sum_probs=30.7
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCH
Q ss_conf 805698157111688999997898599973998
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDF 36 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~ 36 (475)
.+|++||-|--|..-|..|++.||+|.||++.+
T Consensus 194 KkVAIIGaGPAGLsaAy~L~~~Gh~VTVfE~~~ 226 (652)
T PRK12814 194 KKVAIIGAGPAGLTAAYYLLRKGHDVTIFDANE 226 (652)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf 979996837899999999997799069981588
No 483
>PRK13535 erythrose 4-phosphate dehydrogenase; Provisional
Probab=90.93 E-value=0.33 Score=28.50 Aligned_cols=164 Identities=19% Similarity=0.246 Sum_probs=85.2
Q ss_pred EEEEEECCHHHHHHHHHHHHCC----CEEEEEEC--CHHHHHHHHHHCC---CCCCCCEECCCHHHHHHHCCCCCEEEEE
Q ss_conf 0569815711168899999789----85999739--9899999997122---1127840328989998605778899997
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKG----FRLAVYNK--DFELTDVFIKKIS---GLSQKVIVTKNLEQMVEAVCKPRKILMM 75 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G----~~V~vydr--~~~~~~~l~~~~~---~~~~~~~~~~s~~e~v~~l~~pr~Iil~ 75 (475)
+||+-|+|+.|+...|-+.+.+ ++|..-|- +++...-+.+.-. .....+..- ++. -.++..++-++.
T Consensus 3 kIgINGFGRIGR~v~R~~~e~~~~~~i~vVaINd~~~~~~~ayLLkyDSvhG~~~~~v~~~---~~~-l~v~~~~I~~~~ 78 (336)
T PRK13535 3 RVAINGFGRIGRNVLRALYESGRRAEITVVAINELADAEGMAHLLKYDTSHGRFAWEVRQE---RDQ-LFVGDDAIRLLH 78 (336)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCEEEE---CCE-EEECCEEEEEEE
T ss_conf 9999788889999999998668899869999788999899999864226788899978970---897-999998999995
Q ss_pred CCCHHHHHHHHHHHHHCCC-CCCEEEECCCCCHHHHHHHHHHHHHCCCC--EECCCCCCCCCCCCCCCEEEEECCHHHHH
Q ss_conf 6990699999999972078-99899967986578999999999847994--30675467600035684378845489998
Q gi|254780716|r 76 VTDGDPVDQLIDKLKPLLS-PEDILLDGGNSHFCDTQIRSLQLSEKGIY--FIGIGVSGGVKGARSGASLMVGGNEKAYN 152 (475)
Q Consensus 76 vp~g~~v~~vi~~l~~~l~-~g~iiID~sts~~~~t~~~~~~l~~kgi~--fid~pVSGG~~gA~~G~slMvGG~~~~~~ 152 (475)
-.++. -+|.-+ .-|+||||+-. |.+......-++ .|.. .+.+|..+.. .+++..|-+.+.|+
T Consensus 79 ~~dp~--------~ipW~~~~vD~ViE~TG~-f~~~~~a~~Hl~-~GakkViiSaP~~~~~-----d~tiV~GVN~~~~~ 143 (336)
T PRK13535 79 ERDLA--------SLPWRELGVDVVLDCTGV-YGSREDGEAHIA-AGAKKVLFSHPGSNDL-----DATVVYGVNHDQLR 143 (336)
T ss_pred CCCHH--------HCCCCCCCCCEEEEECCC-CCCHHHHHHHHH-CCCCEEEEECCCCCCC-----CCEEEECCCHHHCC
T ss_conf 58943--------398311587599970431-167899999987-5985689825887666-----86389615756748
Q ss_pred HHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHH--HHHHHHHHHH
Q ss_conf 889999987501567861898569874678988776--7878889998
Q gi|254780716|r 153 RVENILLSISAKYQNSPCCALLGPDGSGHFVKMIHN--GIEYANMQLI 198 (475)
Q Consensus 153 ~~~piL~~iaak~~~~~cv~y~G~~GsGh~vKMVhN--gIey~~mq~i 198 (475)
.-..++..-+..+. | -+-.+|.+|. |||.|.|..|
T Consensus 144 ~~~~IiSnASCTTN---c--------lAPv~kvl~~~fGI~~g~mTTI 180 (336)
T PRK13535 144 AEHRIVSNASCTTN---C--------IIPVIKLLDDAFGIESGTVTTI 180 (336)
T ss_pred CCCEEEECCCCCCC---E--------EEEHHHHHHHCCCEEEEEEEEE
T ss_conf 66538975753324---1--------4012553663367577578877
No 484
>PRK09853 putative selenate reductase subunit YgfK; Provisional
Probab=90.90 E-value=1.3 Score=23.96 Aligned_cols=33 Identities=18% Similarity=0.415 Sum_probs=30.8
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCH
Q ss_conf 805698157111688999997898599973998
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDF 36 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~ 36 (475)
.+|++||-|-=|..-|..|++.||+|.||++.+
T Consensus 551 KKVAVIGsGPAGLaAA~~Lar~Gh~VTVFEk~~ 583 (1032)
T PRK09853 551 HPVAVIGAGPAGLAAGYFLARAGHPVTVFEREE 583 (1032)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 979998968899999999997799369981589
No 485
>pfam01494 FAD_binding_3 FAD binding domain. This domain is involved in FAD binding in a number of enzymes.
Probab=90.86 E-value=0.28 Score=28.97 Aligned_cols=34 Identities=26% Similarity=0.437 Sum_probs=31.6
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHH
Q ss_conf 8056981571116889999978985999739989
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFE 37 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~ 37 (475)
.+|-|||-|.-|..+|.-|.++|++|.+|++.++
T Consensus 2 ~DV~IvGaG~aGl~lA~~L~~~Gi~v~V~Er~~~ 35 (349)
T pfam01494 2 TDVLIVGGGPAGLMLALLLARAGVRVVLVERHAT 35 (349)
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEECCCCC
T ss_conf 9789999288999999999877998999928999
No 486
>pfam08659 KR KR domain. This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=90.81 E-value=1.3 Score=24.09 Aligned_cols=80 Identities=18% Similarity=0.245 Sum_probs=48.1
Q ss_pred ECCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHH
Q ss_conf 1571116889999978985-999739989999999712211278403289899986057788999976990699999999
Q gi|254780716|r 10 GLGSMGSNLSLNILDKGFR-LAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQLIDK 88 (475)
Q Consensus 10 GLG~MG~~mA~nL~~~G~~-V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi~~ 88 (475)
|-+-+|..+|+.|+++|.. |....|+++..++..+.. +++...=.+...+-.-+.+.+.++++++.
T Consensus 8 as~GIG~aia~~la~~Ga~~vvl~~r~~~~~~~~~~~~-------------~~l~~~g~~~~~~~~Dv~d~~~v~~~~~~ 74 (181)
T pfam08659 8 GLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALL-------------AELEARGAEVTVVACDVSDRDAVAALLAE 74 (181)
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHH-------------HHHHHCCCEEEEEECCCCCHHHHHHHHHH
T ss_conf 78789999999999879978999868976629999999-------------99996599699997568999999988865
Q ss_pred HHHCCCCCCEEEEC
Q ss_conf 97207899899967
Q gi|254780716|r 89 LKPLLSPEDILLDG 102 (475)
Q Consensus 89 l~~~l~~g~iiID~ 102 (475)
+.....+=|++|..
T Consensus 75 ~~~~~g~id~lvnn 88 (181)
T pfam08659 75 IRADGPPLRGVIHA 88 (181)
T ss_pred HHHHCCCEEEEEEE
T ss_conf 79873984899954
No 487
>PRK08163 salicylate hydroxylase; Provisional
Probab=90.81 E-value=0.34 Score=28.31 Aligned_cols=37 Identities=22% Similarity=0.382 Sum_probs=33.3
Q ss_pred CCC-CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHH
Q ss_conf 998-8056981571116889999978985999739989
Q gi|254780716|r 1 MKQ-ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFE 37 (475)
Q Consensus 1 M~k-~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~ 37 (475)
|++ ..|-|||-|.-|..+|.-|.++|++|.||++.++
T Consensus 1 M~~~~~V~IVGaGiaGL~lA~~L~r~Gi~v~V~Er~~~ 38 (396)
T PRK08163 1 MTHVTPVLIVGGGIGGLAAALALARQGIKVKLLEQAAE 38 (396)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCC
T ss_conf 98998499989788999999999978999999917998
No 488
>PRK05854 short chain dehydrogenase; Provisional
Probab=90.80 E-value=1.4 Score=23.90 Aligned_cols=76 Identities=13% Similarity=0.127 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHC
Q ss_conf 11168899999789859997399899999997122112784032898999860577889999769906999999999720
Q gi|254780716|r 13 SMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQLIDKLKPL 92 (475)
Q Consensus 13 ~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi~~l~~~ 92 (475)
=+|...|+.|++.|.+|++--|+.++.++.+++-.....+. +..++-+-+.+-+.|++..+.+...
T Consensus 25 GIG~~~a~~La~~Ga~Vil~~R~~~k~~~a~~~i~~~~~~~--------------~v~~~~lDLs~l~sVr~~a~~~~~~ 90 (314)
T PRK05854 25 GLGFGLARRLAAAGADVILPVRNRAKGEAAVAAIRTAVPDA--------------KLTIRALDLSSLASVAALGEQLLAE 90 (314)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCC--------------CEEEEECCCCCHHHHHHHHHHHHHC
T ss_conf 99999999999784989999799999999999999868998--------------5699964631689999999987530
Q ss_pred CCCCCEEEEC
Q ss_conf 7899899967
Q gi|254780716|r 93 LSPEDILLDG 102 (475)
Q Consensus 93 l~~g~iiID~ 102 (475)
..+=|++|.-
T Consensus 91 ~~~lDiLInN 100 (314)
T PRK05854 91 GRPIHLLINN 100 (314)
T ss_pred CCCCCEEEEC
T ss_conf 6875278726
No 489
>COG1810 Uncharacterized protein conserved in archaea [Function unknown]
Probab=90.79 E-value=1.4 Score=23.89 Aligned_cols=131 Identities=15% Similarity=0.109 Sum_probs=71.4
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCE---EEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECC
Q ss_conf 9988056981571116889999978985---9997399899999997122112784032898999860577889999769
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGFR---LAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVT 77 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~~---V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp 77 (475)
|++ |+|+.-|.-|..+..||..+||. |.+++. |+....+ .+.++++...+...++++.-.-
T Consensus 1 ~mk--i~vlt~g~yG~R~~~nl~~~~f~~~~v~v~~~-Pe~~~~f-------------ie~P~~~Lp~~~e~Di~va~~l 64 (224)
T COG1810 1 MMK--ILVLTDGEYGKRAVNNLACKGFKNQFVAVKEY-PEELPDF-------------IEEPEDLLPKLPEADIVVAYGL 64 (224)
T ss_pred CCE--EEEEEECCCHHHHHHHHHHHCCCCCEEEEEEC-CCCCCCH-------------HHCHHHHCCCCCCCCEEEEECC
T ss_conf 928--99996062048998767652155315898736-6325300-------------1277976678888778999514
Q ss_pred CHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEECCHHHHHHHHHH
Q ss_conf 90699999999972078998999679865789999999998479943067546760003568437884548999888999
Q gi|254780716|r 78 DGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGVKGARSGASLMVGGNEKAYNRVENI 157 (475)
Q Consensus 78 ~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~~gA~~G~slMvGG~~~~~~~~~pi 157 (475)
++.-.-+..+.+ ..-....+||-..+.. -.-.++.+.+.+.|+.|.-. ..|+.=++..+..+..+
T Consensus 65 HPDl~~~L~e~~-~~~~~~alIvp~~~~~-g~rkqL~~~~~~~g~e~~~p-------------~p~C~Le~~~~p~i~~F 129 (224)
T COG1810 65 HPDLLLALPEKA-AEGGVKALIVPAEPPE-GLRKQLKEFCEELGVEFEAP-------------EPFCSLEPNENPHIDEF 129 (224)
T ss_pred CCCHHHHHHHHH-HHCCCCEEEEECCCCH-HHHHHHHHHHHHCCEEEECC-------------CCCCCCCCCCCHHHHHH
T ss_conf 850789999999-8579617998457973-48999998742236055368-------------76556788888579999
Q ss_pred HHHHH
Q ss_conf 99875
Q gi|254780716|r 158 LLSIS 162 (475)
Q Consensus 158 L~~ia 162 (475)
++.++
T Consensus 130 ~e~FG 134 (224)
T COG1810 130 AERFG 134 (224)
T ss_pred HHHCC
T ss_conf 99719
No 490
>TIGR01317 GOGAT_sm_gam glutamate synthases, NADH/NADPH, small subunit; InterPro: IPR006005 One pathway for the assimilation of ammonia and glutamate biosynthesis involves glutamate synthase (1.4.1.13 from EC) which transfers the amide group of glutamine to 2-oxoglutarate to yield two molecules of glutamate. 2 L-glutamate + NADP^+ = L-glutamine + 2-oxoglutarate + NADPH + H^+. This describes a family in several archaeal and deeply branched bacterial lineages of a homotetrameric form of the NADPH-dependent or NADH-dependent glutamate synthase (1.4.1.13 from EC and 1.4.1.14 from EC respectively) small subunit. There is no corresponding large subunit. ; GO: 0016639 oxidoreductase activity acting on the CH-NH2 group of donors NAD or NADP as acceptor, 0006537 glutamate biosynthetic process.
Probab=90.76 E-value=0.37 Score=28.05 Aligned_cols=31 Identities=16% Similarity=0.479 Sum_probs=29.7
Q ss_pred EEEEEECCHHHHHHHHHHHHCCCEEEEEECC
Q ss_conf 0569815711168899999789859997399
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGFRLAVYNKD 35 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~ 35 (475)
+|+|||=|-=|.+=|.-|.++||.|+||-|+
T Consensus 153 kVAVVGSGPAGLAaA~qLnrAGH~VTVfER~ 183 (517)
T TIGR01317 153 KVAVVGSGPAGLAAADQLNRAGHTVTVFERE 183 (517)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 6899756757999999985358838997436
No 491
>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]
Probab=90.76 E-value=0.46 Score=27.39 Aligned_cols=36 Identities=25% Similarity=0.516 Sum_probs=32.1
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHH
Q ss_conf 805698157111688999997898599973998999
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELT 39 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~ 39 (475)
+.||+||=|..|.-|+.--.+-|++|.+.|.+++.-
T Consensus 2 ~tvgIlGGGQLgrMm~~aa~~lG~~v~vLdp~~~~P 37 (375)
T COG0026 2 KTVGILGGGQLGRMMALAAARLGIKVIVLDPDADAP 37 (375)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCC
T ss_conf 769997686999999999986497799956999996
No 492
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=90.75 E-value=1.4 Score=23.86 Aligned_cols=105 Identities=19% Similarity=0.200 Sum_probs=61.3
Q ss_pred EEEEEEC-CHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHH---HCC-CCCCCCEECCCHHHHHHHCCCCC
Q ss_conf 0569815-7111688999997898-------599973998--99999997---122-11278403289899986057788
Q gi|254780716|r 5 DIGIIGL-GSMGSNLSLNILDKGF-------RLAVYNKDF--ELTDVFIK---KIS-GLSQKVIVTKNLEQMVEAVCKPR 70 (475)
Q Consensus 5 ~IGiIGL-G~MG~~mA~nL~~~G~-------~V~vydr~~--~~~~~l~~---~~~-~~~~~~~~~~s~~e~v~~l~~pr 70 (475)
+|.+||- |+.|+++|..|+.... .++.||+.+ ++.+...- ..+ .....+....+.. +.++..+
T Consensus 2 KV~IiGA~G~IG~~la~~l~~~~l~g~~~~i~l~L~Di~~~~~~~~G~~mdl~~~a~~~~~~v~~~~~~~---~~~~~aD 78 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVVITTDPE---EAFKDVD 78 (323)
T ss_pred EEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCEEECCCHH---HHHCCCC
T ss_conf 8999899978999999999728636998600899975888655531487866534665558748428858---9837998
Q ss_pred EEEEECC---------------CHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHH
Q ss_conf 9999769---------------9069999999997207899899967986578999999
Q gi|254780716|r 71 KILMMVT---------------DGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRS 114 (475)
Q Consensus 71 ~Iil~vp---------------~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~ 114 (475)
+|++.-- +.+.+.++...+..+.+|+.++|-.|| |-|+....
T Consensus 79 vViitaG~prkpG~tR~DLl~~N~~I~k~~~~~i~~~a~p~~~vivvsN--PvD~~~~v 135 (323)
T cd00704 79 VAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVGN--PANTNALI 135 (323)
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC--CCHHHHHH
T ss_conf 8998278788999827999987489999999999851799838999578--64689999
No 493
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=90.74 E-value=1.4 Score=23.86 Aligned_cols=79 Identities=13% Similarity=0.184 Sum_probs=51.9
Q ss_pred EEEEEC-CH--HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 569815-71--116889999978985999739989999999712211278403289899986057788999976990699
Q gi|254780716|r 6 IGIIGL-GS--MGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV 82 (475)
Q Consensus 6 IGiIGL-G~--MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v 82 (475)
+=+.|- |- .|..+|+.|++.|.+|.+.+++.+.. +.+++ +.+.+..+..+-.-|.+.+.+
T Consensus 9 alVTGaa~g~GIG~aiA~~la~~Ga~V~i~~~~~~~~-~~~~~----------------~~~~~~~~~~~~~Dvt~~~~v 71 (254)
T PRK07533 9 GLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKAR-PYVEP----------------LAEELDAPLLMPLDVREPGQL 71 (254)
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHH----------------HHHHCCCEEEEEECCCCHHHH
T ss_conf 9996888980899999999998799999982887789-99999----------------997459818999169999999
Q ss_pred HHHHHHHHHCCCCCCEEEE
Q ss_conf 9999999720789989996
Q gi|254780716|r 83 DQLIDKLKPLLSPEDILLD 101 (475)
Q Consensus 83 ~~vi~~l~~~l~~g~iiID 101 (475)
+++++.+.....+=|++|.
T Consensus 72 ~~~~~~~~~~~G~iDilVn 90 (254)
T PRK07533 72 EAVFARIAEEWGRLDFVLH 90 (254)
T ss_pred HHHHHHHHHHHCCCCEEEE
T ss_conf 9999999998499778974
No 494
>PRK06617 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
Probab=90.70 E-value=0.41 Score=27.74 Aligned_cols=34 Identities=24% Similarity=0.442 Sum_probs=30.8
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCH
Q ss_conf 998805698157111688999997898599973998
Q gi|254780716|r 1 MKQADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDF 36 (475)
Q Consensus 1 M~k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~ 36 (475)
|+ +|-|||-|.-|.-+|..|+++|++|.++++.+
T Consensus 1 m~--DV~IvGaG~vGl~lAl~La~~g~~v~lie~~~ 34 (374)
T PRK06617 1 MS--NTVILGCGLSGMLTALSFAQKGIKTTIFESKS 34 (374)
T ss_pred CC--EEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf 96--29999966999999999985799699997899
No 495
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=90.68 E-value=1.4 Score=23.82 Aligned_cols=79 Identities=18% Similarity=0.368 Sum_probs=51.1
Q ss_pred EEEEEC-CHHHHHHHHHHHHCCCEEEE-EECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 569815-71116889999978985999-7399899999997122112784032898999860577889999769906999
Q gi|254780716|r 6 IGIIGL-GSMGSNLSLNILDKGFRLAV-YNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD 83 (475)
Q Consensus 6 IGiIGL-G~MG~~mA~nL~~~G~~V~v-ydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~ 83 (475)
+=+-|- +-+|..+|+.|++.|.+|.+ |.++++..+++.++... ... .+-.-|.+.+.++
T Consensus 9 alVTGas~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~g~---~~~----------------~~~~Dv~~~~~~~ 69 (254)
T PRK08642 9 VLVTGGSRGLGAAIARAFAREGARVVVNYHRSEDAAEALADELGD---RAI----------------AIQADVTDRNQVD 69 (254)
T ss_pred EEEECHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCC---CEE----------------EEEECCCCHHHHH
T ss_conf 999781119999999999987999999618988999999998199---469----------------9980699999999
Q ss_pred HHHHHHHHCCC-CCCEEEECC
Q ss_conf 99999972078-998999679
Q gi|254780716|r 84 QLIDKLKPLLS-PEDILLDGG 103 (475)
Q Consensus 84 ~vi~~l~~~l~-~g~iiID~s 103 (475)
+.++.....+. +-|++|...
T Consensus 70 ~~v~~~~~~~G~~idilVnnA 90 (254)
T PRK08642 70 AMFATATEHFGKPITTVVNNA 90 (254)
T ss_pred HHHHHHHHHHCCCCEEEEECC
T ss_conf 999999999499776998676
No 496
>PRK05599 hypothetical protein; Provisional
Probab=90.61 E-value=1.4 Score=23.78 Aligned_cols=80 Identities=14% Similarity=0.158 Sum_probs=50.9
Q ss_pred EEEEECC-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHH
Q ss_conf 5698157-111688999997898599973998999999971221127840328989998605778899997699069999
Q gi|254780716|r 6 IGIIGLG-SMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQ 84 (475)
Q Consensus 6 IGiIGLG-~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~ 84 (475)
|=+.|-. -.|..+|+.|+ +|++|.+..|++++.+++.++........ ..++-+-+.+.+++++
T Consensus 3 vlITGASsGIG~a~A~~lA-~G~~vvl~~R~~e~l~~l~~~l~~~g~~~---------------v~~~~~Dvtd~~~~~~ 66 (246)
T PRK05599 3 ILILGGTSDIAGEIATLLA-HGEDVVLAARRPEAAGGLAEDLRQLGATS---------------VHVLSFDATDLDSHRE 66 (246)
T ss_pred EEEECCCHHHHHHHHHHHH-CCCCEEEEECCHHHHHHHHHHHHHHCCCE---------------EEEEECCCCCHHHHHH
T ss_conf 9998886899999999998-59949999999999999999998625971---------------8997289999999999
Q ss_pred HHHHHHHCCCCCCEEEE
Q ss_conf 99999720789989996
Q gi|254780716|r 85 LIDKLKPLLSPEDILLD 101 (475)
Q Consensus 85 vi~~l~~~l~~g~iiID 101 (475)
+++++.....+=|++|.
T Consensus 67 ~v~~~~~~~g~id~lv~ 83 (246)
T PRK05599 67 LVKQTQELAGEISLAVV 83 (246)
T ss_pred HHHHHHHHCCCCEEEEE
T ss_conf 99999986198439998
No 497
>PRK08020 ubiF 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed
Probab=90.57 E-value=0.43 Score=27.57 Aligned_cols=36 Identities=33% Similarity=0.625 Sum_probs=32.3
Q ss_pred CCC--CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCH
Q ss_conf 998--805698157111688999997898599973998
Q gi|254780716|r 1 MKQ--ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDF 36 (475)
Q Consensus 1 M~k--~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~ 36 (475)
|+. .+|-|||-|.-|..+|.-|++.|++|.+.++.+
T Consensus 1 M~~~~~DV~IvG~G~vGl~lAl~La~~G~~V~viE~~~ 38 (391)
T PRK08020 1 MTNQPTEIAIVGGGMVGGALALGLAQHGFSVAVIEHAA 38 (391)
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 99999848999936999999999986699789994899
No 498
>PRK01368 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=90.57 E-value=1.4 Score=23.76 Aligned_cols=121 Identities=23% Similarity=0.277 Sum_probs=61.1
Q ss_pred CCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEE--CCCHH
Q ss_conf 8805698157111688999997898599973998999999971221127840328989998605778899997--69906
Q gi|254780716|r 3 QADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMM--VTDGD 80 (475)
Q Consensus 3 k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~--vp~g~ 80 (475)
+.+|+++|+|.=|.+.|+-|.+.+ .+.+||-.++..+.+.+.... ..+....+. + +...+.|+.+ +|...
T Consensus 6 ~K~v~V~GlG~sG~a~~~~L~~~~-~~~~~dd~~~~~~~~~~~~~~--~~~~~~~~~-~----~~~~d~iV~SPGI~~~~ 77 (450)
T PRK01368 6 KQKIGVFGLGKTGISVYEELQNKY-DLIVYDDLKANRDIFEELFSK--NAIIALSDS-R----WQNLDKIVLSPGIPLTH 77 (450)
T ss_pred CCEEEEEEECHHHHHHHHHHHHCC-CEEEEECCCCCHHHHHHHHCC--CCEECCCCC-C----HHCCCEEEECCCCCCCC
T ss_conf 990899958787999999997199-989998996564789975214--836025711-1----52199999899619989
Q ss_pred H-HHHHHH---------HHHHCCCCC-C-EEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCC
Q ss_conf 9-999999---------997207899-8-9996798657899999999984799430675467
Q gi|254780716|r 81 P-VDQLID---------KLKPLLSPE-D-ILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSG 131 (475)
Q Consensus 81 ~-v~~vi~---------~l~~~l~~g-~-iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSG 131 (475)
+ +....+ ++.-...++ . |-|-+||---..|.-.+..|++.|....-+|--|
T Consensus 78 p~~~~a~~~~i~i~~eiel~~~~~~~~~~IaITGTnGKTTTt~li~~iL~~~g~~~~~~GNIG 140 (450)
T PRK01368 78 EIVKIAKNFNIPITSDIDLLFEKSKNLKFIAITGTNGKSTTTALISHILNSNGLDYPVAGNIG 140 (450)
T ss_pred HHHHHHHHCCCCEEEHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCC
T ss_conf 999999987995876999999766799779996899974899999999997599628962556
No 499
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=90.48 E-value=1.5 Score=23.70 Aligned_cols=96 Identities=9% Similarity=0.016 Sum_probs=0.0
Q ss_pred CCCCEEEEEECCH---HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECC
Q ss_conf 9988056981571---1168899999789859997399899999997122112784032898999860577889999769
Q gi|254780716|r 1 MKQADIGIIGLGS---MGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVT 77 (475)
Q Consensus 1 M~k~~IGiIGLG~---MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp 77 (475)
|+...+=+-|-+. +|.++|+.|++.|++|.+.+++.+....-...... ......++....-.++..+-.-|.
T Consensus 3 L~gKvalVTGasr~~GIG~aiA~~la~~Ga~V~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~g~~~~~~~~Dvs 77 (257)
T PRK12748 3 LMKKIAIVTGASRLNGIGAAICRVLAQKGIDIFFTYWSQYDKAMPWGMHDK-----EPFLLKEEIESYGVRCEMLEIDLS 77 (257)
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCHH-----HHHHHHHHHHHCCCEEEEEECCCC
T ss_conf 999889992889998549999999998799999970752554434234606-----799999999965982899984689
Q ss_pred CHHHHHHHHHHHHHCCCCCCEEEE
Q ss_conf 906999999999720789989996
Q gi|254780716|r 78 DGDPVDQLIDKLKPLLSPEDILLD 101 (475)
Q Consensus 78 ~g~~v~~vi~~l~~~l~~g~iiID 101 (475)
+.+.++.+++.+...+..=||+|.
T Consensus 78 ~~~~~~~~~~~~~~~~G~iDiLVn 101 (257)
T PRK12748 78 QSYSPNRLFYMVSERLGDPSILIN 101 (257)
T ss_pred CHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf 999999999999997499989998
No 500
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=90.37 E-value=1.5 Score=23.64 Aligned_cols=75 Identities=15% Similarity=0.235 Sum_probs=0.0
Q ss_pred ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHH
Q ss_conf 15711168899999789859997399899999997122112784032898999860577889999769906999999999
Q gi|254780716|r 10 GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQLIDKL 89 (475)
Q Consensus 10 GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi~~l 89 (475)
|-+-+|.++|+.|++.|.+|.+.+++ +..++..+.....+..+.. +-.-|.+.+.+++.++.+
T Consensus 23 as~GIG~aiA~~la~~Ga~Vvi~~~~-~~~~~~~~~~~~~g~~~~~----------------~~~Dvs~~~~v~~~v~~~ 85 (258)
T PRK06935 23 GNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTF----------------VQLDLTKKESAEAVVAEA 85 (258)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEECCC-CCHHHHHHHHHHCCCCEEE----------------EEECCCCHHHHHHHHHHH
T ss_conf 57589999999999879999997299-7899999999966993799----------------990489999999999999
Q ss_pred HHCCCCCCEEEE
Q ss_conf 720789989996
Q gi|254780716|r 90 KPLLSPEDILLD 101 (475)
Q Consensus 90 ~~~l~~g~iiID 101 (475)
.....+=|++|.
T Consensus 86 ~~~~G~iDiLVN 97 (258)
T PRK06935 86 LEKFGKIDILVN 97 (258)
T ss_pred HHHCCCCCEEEE
T ss_conf 997499999998
Done!