HHsearch alignment for GI: 254780716 and conserved domain: pfam04016

Probab=92.46  E-value=0.94  Score=25.12  Aligned_cols=104  Identities=14%  Similarity=0.168  Sum_probs=63.7

Q ss_pred             CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf             80569815711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r    4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD   83 (475)
Q Consensus         4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~   83 (475)
T Consensus       112 ~kV~vVG~--f~-P~~~~l~~~~~~~~V~Er~~~~~~~--------~~~~~---p~~~~~~lLp~~D~viI--TgstlvN  175 (229)
T pfam04016       112 KKVVVVGY--FA-PVLKRLRERGAEVTVLERNPRLLDP--------AEGDL---PDEAAEELLPEADVVII--TGSTLVN  175 (229)
T ss_pred             CEEEEECC--CH-HHHHHHHHCCCCEEEEECCCCCCCC--------CCCCC---CHHHHHHHCCCCCEEEE--EECHHHC
T ss_conf             98999857--75-8899998648967999668755788--------78888---97898875124889999--8403541


Q ss_pred             HHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECC
Q ss_conf             99999972078998999679865789999999998479943067
Q gi|254780716|r   84 QLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGI  127 (475)
Q Consensus        84 ~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~  127 (475)
T Consensus       176 ~Tl~~lL~~~~~~~~vvl~GPS~p~~----P~~l~~~Gv~~lag  215 (229)
T pfam04016       176 GTLERLLALARKAAEVVLVGPSAPLL----PEALFGYGVDVLAG  215 (229)
T ss_pred             CCHHHHHHHCCCCCEEEEECCCCCCC----HHHHHHCCCCEEEE
T ss_conf             89899997476587799989986357----78996389767867