HHsearch alignment for GI: 254780717 and conserved domain: cd01017

>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=100.00  E-value=0  Score=479.90  Aligned_cols=273  Identities=26%  Similarity=0.429  Sum_probs=247.2

Q ss_pred             CCCEEEEEECHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCC-CCC
Q ss_conf             3880599972289999999707944178870589983533568024566502578999676610356899973145-576
Q gi|254780717|r   21 AGSLQVVVSIKPIHSIVSCIMQGIGTPALLVKGASSPHEYSLRISEAMMLENADIIFWLGAEMESFLVKPLHSLNK-QSN   99 (294)
Q Consensus        21 ~~~~~Vv~s~~pl~~lv~~I~gd~~~V~~L~~~g~dpH~y~~tp~d~~~l~~Adlii~~G~~~E~~~~~~~~~~~~-~~~   99 (294)
T Consensus         1 sgki~Vv~S~~p~~~lv~~I~Gd~v~V~~lv~~g~dPH~yep~p~d~~~l~~Adli~~nG~~lE~~l~~~~~~~~~~~~~   80 (282)
T cd01017           1 SGKLKVVTTFYPLYEFTKAIGGDKADVKLIIPAGTEPHDFEPSPKDIARIADADVFVYNGLGMETWAEKVLKSLQNKKLK   80 (282)
T ss_pred             CCCCEEEEECHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCE
T ss_conf             99828999888999999998199448998159897963675899999999669999991878368999999853689977


Q ss_pred             EEEEEECCCCCCC---CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             7997513544621---0012111233212247567765555678999999997421865658899899998631222358
Q gi|254780717|r  100 VVTLSHSPDLHRI---LLRDNHSHFHDSEADDLHLWLNPLNVQYIAHVIAMELIKKDPRNKIIYEKNEEEFKNQLSQLDK  176 (294)
Q Consensus       100 ~i~~~~~~~~~~~---~~~~~~~~~~~~~~~dpH~Wl~p~n~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~L~~l~~  176 (294)
T Consensus        81 vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DPH~Wldp~~~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~L~~l~~  160 (282)
T cd01017          81 VVEASKGIKLLKAGGAEHDHDHSHSHHHGDYDPHVWLSPVLAIQQVENIKDALIKLDPDNKEYYEKNAAAYAKKLEALDQ  160 (282)
T ss_pred             EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99877895235567765555555445579999825578155999999999999986844179999999999999999999


Q ss_pred             HHHHHCCCCCCCEEEECCCHHHHHHHHCCCCEECC-CCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHH
Q ss_conf             99985030027814620621577898749812003-46775444978899999999754993899818889789999999
Q gi|254780717|r  177 ELHSILQPVEKKKIIVFHEAYRYFASHYNLSIVTF-PMSHSVFMGAASLRNIRSKIISDKISCLFYGPEFDSKIIRSITN  255 (294)
Q Consensus       177 ~~~~~~~~~~~~~~i~~H~a~~Yf~~~~gl~~~~~-~~~~~~~~s~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~  255 (294)
T Consensus       161 ~~~~~l~~~~~~~~v~~H~af~Yf~~~ygl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~ia~  240 (282)
T cd01017         161 EYRAKLAKAKGKTFVTQHAAFGYLARRYGLKQIAIVGVSPEVEPSPKQLAELVEFVKKSDVKYIFFEENASSKIAETLAK  240 (282)
T ss_pred             HHHHHHHCCCCCCEEEECCHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHH
T ss_conf             99998744367856873533789998669848654334888899999999999999985998999818999099999999


Q ss_pred             HHCCCEEEECCCCCCCCC---CCCCHHHHHHHHHHHHHHHC
Q ss_conf             719908998053367877---81678999999999998741
Q gi|254780717|r  256 DTGVMSAILDPEGMLIAE---GPELYFQLMRSMSNSIAKNC  293 (294)
Q Consensus       256 e~~~~~~~ld~~~~~~~~---~~~~Y~~~m~~n~~~l~k~l  293 (294)
T Consensus       241 e~g~~v~~l~pl~~~~~~~~~~~~~Y~~~m~~N~~~i~~aL  281 (282)
T cd01017         241 ETGAKLLVLNPLETLTKEEIDDGKDYFSLMKENLETLKRAL  281 (282)
T ss_pred             HHCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             81996785447666652348873669999999999999970