Query gi|254780717|ref|YP_003065130.1| zinc uptake ABC transporter [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 294
No_of_seqs 110 out of 2555
Neff 8.0
Searched_HMMs 33803
Date Wed Jun 1 14:28:04 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780717.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 >1xvl_A Mn transporter, MNTC p 100.0 9.4E-44 0 297.9 15.4 176 21-203 43-218 (231)
2 >1pq4_A Periplasmic binding pr 100.0 3.7E-42 0 287.8 14.0 166 22-187 1-190 (209)
3 >1toa_A Tromp-1, protein (peri 100.0 1.7E-41 0 283.6 14.1 178 1-185 6-193 (195)
4 >2o1e_A YCDH; alpha-beta prote 100.0 7.1E-41 1.4E-45 279.6 13.6 170 19-188 17-191 (218)
5 >3hh8_A Metal ABC transporter 100.0 2E-41 0 283.1 10.2 175 11-185 5-179 (179)
6 >2prs_A High-affinity zinc upt 100.0 1.3E-38 3.7E-43 265.3 14.0 161 25-185 1-172 (172)
7 >3cx3_A Lipoprotein; zinc-bind 100.0 1.1E-38 3.3E-43 265.7 11.9 168 18-186 5-176 (199)
8 >3gi1_A LBP, laminin-binding p 100.0 5.7E-38 1.7E-42 261.2 12.3 166 19-185 8-177 (177)
9 >2prs_A High-affinity zinc upt 99.9 2.1E-23 6.2E-28 168.6 10.2 109 186-294 1-110 (112)
10 >3hh8_A Metal ABC transporter 99.9 7.5E-23 2.2E-27 165.1 12.6 110 185-294 2-114 (115)
11 >3gi1_A LBP, laminin-binding p 99.9 8.3E-23 2.4E-27 164.8 12.4 107 186-293 1-108 (109)
12 >1toa_A Tromp-1, protein (peri 99.9 4.3E-23 1.3E-27 166.7 9.6 109 186-294 1-117 (118)
13 >1xvl_A Mn transporter, MNTC p 99.8 9.2E-19 2.7E-23 139.1 10.1 87 186-272 2-89 (90)
14 >1pq4_A Periplasmic binding pr 99.8 2.2E-18 6.5E-23 136.7 10.0 81 187-268 2-82 (82)
15 >3cx3_A Lipoprotein; zinc-bind 99.8 1.1E-18 3.1E-23 138.7 7.5 84 187-270 1-85 (85)
16 >2o1e_A YCDH; alpha-beta prote 99.8 2.1E-18 6.3E-23 136.8 8.3 81 187-267 1-82 (82)
17 >1m1n_A Nitrogenase molybdenum 82.2 3.7 0.00011 21.0 7.7 146 133-290 56-224 (248)
18 >2gek_A Phosphatidylinositol m 78.0 2.6 7.6E-05 22.0 3.6 99 58-170 71-169 (169)
19 >3lhs_A Ferrichrome ABC transp 61.9 11 0.00033 17.9 5.7 51 135-194 119-169 (184)
20 >2iw1_A Lipopolysaccharide cor 60.5 12 0.00035 17.7 4.0 93 65-171 90-182 (184)
21 >3c5e_A Acyl-coenzyme A synthe 60.4 12 0.00035 17.7 8.1 112 164-284 1-118 (123)
22 >3fro_A GLGA glycogen synthase 58.8 13 0.00038 17.6 5.8 91 65-170 96-187 (188)
23 >2zj3_A Glucosamine--fructose- 56.5 14 0.00041 17.3 6.4 32 220-251 119-150 (216)
24 >1m6j_A TIM, TPI, triosephosph 55.7 14 0.00042 17.2 3.9 82 186-286 166-258 (261)
25 >2a3n_A Putative glucosamine-f 54.1 15 0.00045 17.1 4.9 28 221-248 115-142 (192)
26 >1iv0_A Hypothetical protein; 53.9 15 0.00045 17.1 3.7 49 199-247 45-97 (98)
27 >1tre_A Triosephosphate isomer 53.9 15 0.00045 17.0 7.8 86 185-289 158-253 (255)
28 >1mo0_A TIM, triosephosphate i 53.9 15 0.00045 17.0 4.1 88 186-293 176-274 (275)
29 >1m5w_A Pyridoxal phosphate bi 53.1 16 0.00047 17.0 6.0 44 220-266 112-156 (243)
30 >1yya_A Triosephosphate isomer 52.7 16 0.00047 16.9 8.4 79 187-284 159-248 (250)
31 >2jgq_A Triosephosphate isomer 51.7 17 0.00049 16.8 6.1 79 186-283 150-231 (233)
32 >3eya_A Pyruvate dehydrogenase 51.6 17 0.00049 16.8 6.0 39 63-106 82-120 (180)
33 >3g68_A Putative phosphosugar 51.3 17 0.0005 16.8 8.9 112 64-178 74-187 (188)
34 >1uqt_A Alpha, alpha-trehalose 50.3 17 0.0005 16.8 3.3 92 67-171 119-211 (217)
35 >1dbg_A Chondroitinase B; beta 50.0 6.9 0.0002 19.3 1.2 39 1-41 1-39 (474)
36 >2dwc_A PH0318, 433AA long hyp 48.9 18 0.00054 16.6 5.7 63 198-261 35-108 (108)
37 >1ybh_A Acetolactate synthase, 48.7 18 0.00055 16.5 5.9 85 20-106 15-114 (174)
38 >2vsq_A Surfactin synthetase s 46.7 20 0.00059 16.3 5.1 96 165-266 2-98 (107)
39 >2eq5_A 228AA long hypothetica 45.2 13 0.00038 17.6 2.0 76 187-262 14-100 (101)
40 >1yv9_A Hydrolase, haloacid de 43.6 9.5 0.00028 18.4 1.1 69 195-265 49-118 (154)
41 >3l6u_A ABC-type sugar transpo 42.5 23 0.00068 15.9 7.7 68 195-267 28-98 (155)
42 >3fxa_A SIS domain protein; YP 42.4 21 0.00061 16.2 2.7 31 220-250 104-134 (201)
43 >3egl_A DEGV family protein; a 41.5 24 0.0007 15.8 6.4 83 186-270 4-103 (136)
44 >2vbf_A Branched-chain alpha-k 41.3 24 0.00071 15.8 3.8 42 64-105 86-127 (163)
45 >2q28_A Oxalyl-COA decarboxyla 40.3 25 0.00073 15.7 8.5 136 19-170 18-163 (177)
46 >1q6z_A BFD, BFDC, benzoylform 40.3 25 0.00074 15.7 4.9 24 63-86 84-107 (168)
47 >1ovm_A Indole-3-pyruvate deca 39.9 25 0.00074 15.7 3.0 83 19-104 27-128 (169)
48 >3gvg_A Triosephosphate isomer 39.8 25 0.00075 15.7 8.3 82 187-287 187-279 (283)
49 >2q02_A Putative cytoplasmic p 38.8 26 0.00077 15.6 8.6 15 223-237 225-239 (272)
50 >3c48_A Predicted glycosyltran 38.7 26 0.00078 15.6 4.2 92 65-171 95-187 (188)
51 >2pju_A Propionate catabolism 38.4 27 0.00079 15.5 5.0 71 184-264 14-88 (89)
52 >2c31_A Oxalyl-COA decarboxyla 37.8 27 0.0008 15.5 4.5 142 19-176 18-171 (179)
53 >2hsz_A Novel predicted phosph 37.4 27 0.00081 15.4 4.6 67 196-265 70-141 (170)
54 >3bzc_A TEX; helix-turn-helix, 37.3 22 0.00064 16.1 2.2 47 220-266 43-96 (142)
55 >2iht_A Carboxyethylarginine s 37.0 28 0.00082 15.4 4.4 86 19-106 28-135 (170)
56 >3ite_A SIDN siderophore synth 34.9 30 0.00089 15.2 5.1 80 165-248 2-82 (113)
57 >1amu_A GRSA, gramicidin synth 34.2 31 0.00092 15.1 4.7 97 164-266 1-98 (107)
58 >1nri_A Hypothetical protein H 33.6 32 0.00093 15.1 7.9 63 130-203 24-88 (233)
59 >1aw2_A Triosephosphate isomer 33.5 32 0.00094 15.0 6.4 85 185-288 160-254 (256)
60 >3itv_A L-rhamnose isomerase; 33.5 32 0.00094 15.0 6.1 47 219-265 182-231 (281)
61 >1tjy_A Sugar transport protei 33.1 32 0.00095 15.0 7.8 65 199-267 27-94 (165)
62 >1zbt_A RF-1, peptide chain re 33.0 32 0.00096 15.0 4.4 22 126-147 33-54 (116)
63 >1h6q_A TCTP, P23FYP, translat 32.9 32 0.00096 15.0 4.2 38 137-174 87-124 (168)
64 >3knz_A Putative sugar binding 32.9 32 0.00096 15.0 3.8 27 221-247 77-103 (149)
65 >2pgn_A Cyclohexane-1,2-dione 32.8 33 0.00096 15.0 5.3 83 19-105 21-121 (190)
66 >1n2z_A Vitamin B12 transport 32.6 33 0.00097 14.9 5.6 26 23-48 2-27 (131)
67 >1ozh_A ALS, acetolactate synt 32.2 33 0.00099 14.9 5.4 83 19-105 19-119 (180)
68 >1ko7_A HPR kinase/phosphatase 31.9 34 0.001 14.9 3.7 47 218-264 63-110 (129)
69 >3cf4_G Acetyl-COA decarbonyla 31.4 34 0.001 14.8 5.4 24 63-86 98-121 (170)
70 >3e7w_A D-alanine--poly(phosph 31.4 34 0.001 14.8 4.5 93 165-265 2-96 (106)
71 >3kws_A Putative sugar isomera 31.4 34 0.001 14.8 10.2 25 74-98 53-77 (287)
72 >2fnu_A Aminotransferase; prot 31.0 35 0.001 14.8 3.4 72 187-262 65-143 (238)
73 >2qul_A D-tagatose 3-epimerase 30.5 36 0.0011 14.7 9.5 15 223-237 226-240 (290)
74 >2uz1_A Benzaldehyde lyase; th 30.1 36 0.0011 14.7 4.9 138 19-172 21-176 (186)
75 >2r60_A Glycosyl transferase, 30.1 36 0.0011 14.7 3.4 85 70-169 122-206 (209)
76 >2wvg_A PDC, pyruvate decarbox 29.9 36 0.0011 14.7 5.5 85 19-105 27-129 (177)
77 >2rkb_A Serine dehydratase-lik 29.4 37 0.0011 14.6 3.3 57 195-258 14-72 (79)
78 >2ez9_A Pyruvate oxidase; TPP 29.2 37 0.0011 14.6 6.7 66 19-86 22-102 (229)
79 >1gqe_A Release factor 2, RF2; 28.7 38 0.0011 14.5 4.4 22 126-147 41-62 (120)
80 >3brs_A Periplasmic binding pr 28.7 38 0.0011 14.5 7.0 67 199-267 31-99 (156)
81 >2j27_A Triosephosphate isomer 28.2 39 0.0012 14.5 7.8 78 187-284 160-248 (250)
82 >1j3b_A ATP-dependent phosphoe 28.0 39 0.0012 14.5 3.1 33 128-171 65-98 (110)
83 >2x0d_A WSAF; GT4 family, tran 27.9 24 0.0007 15.8 1.1 78 67-160 77-154 (160)
84 >1xt8_A Putative amino-acid tr 27.8 39 0.0012 14.5 2.2 15 1-15 1-15 (203)
85 >2vbi_A Pyruvate decarboxylase 27.7 40 0.0012 14.4 5.6 84 19-104 24-125 (165)
86 >2d1f_A Threonine synthase; am 27.6 40 0.0012 14.4 4.0 60 195-260 33-94 (110)
87 >2vsy_A XCC0866; transferase, 27.4 40 0.0012 14.4 4.8 95 64-170 82-176 (179)
88 >2zxr_A Single-stranded DNA sp 27.2 40 0.0012 14.4 5.0 61 22-83 25-91 (194)
89 >3jzd_A Iron-containing alcoho 27.1 41 0.0012 14.3 8.0 91 180-270 29-125 (161)
90 >1v5e_A Pyruvate oxidase; oxid 26.9 41 0.0012 14.3 6.5 66 19-86 21-101 (222)
91 >1nu0_A Hypothetical protein Y 26.7 41 0.0012 14.3 2.7 33 221-253 73-106 (138)
92 >2f9f_A First mannosyl transfe 26.3 42 0.0012 14.3 3.7 18 132-149 143-160 (177)
93 >1vmd_A MGS, methylglyoxal syn 26.0 43 0.0013 14.2 8.1 73 186-263 27-107 (120)
94 >2qyw_A Vesicle transport thro 25.7 43 0.0013 14.2 4.1 46 133-178 56-101 (102)
95 >3iv7_A Alcohol dehydrogenase 25.3 44 0.0013 14.1 9.4 83 187-269 38-123 (160)
96 >3dzc_A UDP-N-acetylglucosamin 24.9 14 0.00042 17.3 -0.5 32 131-164 151-182 (185)
97 >1twy_A ABC transporter, perip 24.9 45 0.0013 14.1 4.1 72 1-81 1-85 (290)
98 >1vhx_A Putative holliday junc 24.6 45 0.0013 14.1 5.6 66 195-260 45-115 (150)
99 >3hww_A 2-succinyl-5-enolpyruv 24.3 46 0.0014 14.0 5.1 85 21-106 24-117 (148)
100 >2v5b_A Triosephosphate isomer 24.1 46 0.0014 14.0 7.1 77 187-283 154-241 (244)
101 >2g7z_A Conserved hypothetical 24.0 46 0.0014 14.0 7.2 55 216-270 65-124 (157)
102 >1mdb_A 2,3-dihydroxybenzoate- 24.0 46 0.0014 14.0 4.9 82 164-248 1-83 (151)
103 >1yz1_A Translationally contro 23.7 47 0.0014 14.0 4.3 39 136-174 92-130 (174)
104 >3gk0_A PNP synthase, pyridoxi 23.5 47 0.0014 13.9 8.1 44 220-266 140-184 (278)
105 >1o69_A Aminotransferase; stru 23.5 47 0.0014 13.9 12.4 21 221-241 311-331 (394)
106 >2fn9_A Ribose ABC transporter 23.2 48 0.0014 13.9 7.6 65 198-267 25-92 (150)
107 >1txj_A Translationally contro 23.0 49 0.0014 13.9 4.3 39 136-174 89-127 (171)
108 >2cwd_A Low molecular weight p 22.9 48 0.0014 13.9 1.9 28 62-89 73-100 (161)
109 >1ytl_A Acetyl-COA decarbonyla 22.9 49 0.0014 13.9 4.5 44 63-106 99-144 (174)
110 >3a1c_A Probable copper-export 22.8 49 0.0014 13.8 5.4 47 194-247 68-114 (165)
111 >1vcs_A Vesicle transport thro 22.3 50 0.0015 13.8 5.8 53 132-184 44-96 (102)
112 >2q5c_A NTRC family transcript 22.3 50 0.0015 13.8 8.4 71 185-265 15-89 (90)
113 >3g1w_A Sugar ABC transporter; 22.2 50 0.0015 13.8 7.9 66 199-267 28-95 (171)
114 >1b93_A Protein (methylglyoxal 22.0 51 0.0015 13.7 6.5 72 186-262 27-106 (120)
115 >2q7x_A UPF0052 protein SP_156 21.9 50 0.0015 13.8 1.8 19 60-78 56-74 (210)
116 >3ff4_A Uncharacterized protei 21.6 52 0.0015 13.7 4.7 44 220-263 67-110 (122)
117 >2wvv_A Alpha-L-fucosidase; al 21.6 36 0.0011 14.7 1.0 23 219-241 294-316 (351)
118 >3c9h_A ABC transporter, subst 21.5 42 0.0012 14.3 1.3 54 1-54 1-70 (355)
119 >2d59_A Hypothetical protein P 21.3 52 0.0015 13.7 5.9 44 220-263 86-129 (144)
120 >1v25_A Long-chain-fatty-acid- 21.3 52 0.0016 13.6 5.2 91 166-260 2-93 (147)
121 >3l6b_A Serine racemase; pyrid 21.2 53 0.0016 13.6 5.3 58 195-259 17-76 (82)
122 >1m1n_B Nitrogenase molybdenum 20.9 53 0.0016 13.6 9.0 109 184-292 53-196 (215)
123 >1t9b_A Acetolactate synthase, 20.7 54 0.0016 13.6 4.6 68 18-85 28-111 (197)
124 >3ed4_A Arylsulfatase; structu 20.7 39 0.0012 14.5 1.1 28 1-28 1-32 (388)
125 >2nxw_A Phenyl-3-pyruvate deca 20.5 55 0.0016 13.5 3.9 84 19-104 22-123 (163)
126 >1lci_A Luciferase; oxidoreduc 20.2 55 0.0016 13.5 7.4 89 165-259 2-93 (237)
127 >1jl3_A Arsenate reductase; al 20.1 56 0.0016 13.5 3.2 53 34-86 21-88 (139)
128 >2pan_A Glyoxylate carboligase 20.0 56 0.0017 13.5 9.5 87 19-106 20-123 (220)
No 1
>>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} (A:1-201,A:292-321)
Probab=100.00 E-value=9.4e-44 Score=297.88 Aligned_cols=176 Identities=19% Similarity=0.292 Sum_probs=159.6
Q ss_pred CCCEEEEEECHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCE
Q ss_conf 38805999722899999997079441788705899835335680245665025789996766103568999731455767
Q gi|254780717|r 21 AGSLQVVVSIKPIHSIVSCIMQGIGTPALLVKGASSPHEYSLRISEAMMLENADIIFWLGAEMESFLVKPLHSLNKQSNV 100 (294)
Q Consensus 21 ~~~~~Vv~s~~pl~~lv~~I~gd~~~V~~L~~~g~dpH~y~~tp~d~~~l~~Adlii~~G~~~E~~~~~~~~~~~~~~~~ 100 (294)
.++++||||++|+++++++|+||+++|++|+|+|.|||+|||||+|++++++||+|||+|.+||+|+.+++.+. ++.++
T Consensus 43 ~~~l~VvaT~~pl~~~vk~IaGd~v~V~~Li~~g~dPH~yeptp~d~~~i~~ADlii~~G~~~e~~l~~~~~~~-~~~~~ 121 (231)
T 1xvl_A 43 EEKKKVLTTFTVLADMVQNVAGDKLVVESITRIGAEIHGYEPTPSDIVKAQDADLILYNGMNLERWFEQFLGNV-KDVPS 121 (231)
T ss_dssp CCCCEEEESSHHHHHHHHHHHTTTSEEEESSCSSCCCSSCCCCHHHHHHHHTCSEEEECCTTSSTTHHHHHHTS-SSCCE
T ss_pred CCCCEEEEECHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCHHHHHHHHHC-CCCCC
T ss_conf 89858999775999999998088269998269897953576899999999669999995997308999987633-45542
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99751354462100121112332122475677655556789999999974218656588998999986312223589998
Q gi|254780717|r 101 VTLSHSPDLHRILLRDNHSHFHDSEADDLHLWLNPLNVQYIAHVIAMELIKKDPRNKIIYEKNEEEFKNQLSQLDKELHS 180 (294)
Q Consensus 101 i~~~~~~~~~~~~~~~~~~~~~~~~~~dpH~Wl~p~n~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~L~~l~~~~~~ 180 (294)
+.++++.+.. +..++++++..|||+|+||.|++.++++|++.|+++||+++++|++|+++|.++|+++++++++
T Consensus 122 i~~~~~~~~~------~~~~~~~~~~~dPH~Wldp~~~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~L~~l~~~~~~ 195 (231)
T 1xvl_A 122 VVLTEGIEPI------PIADGPYTDKPNPHAWMSPRNALVYVENIRQAFVELDPDNAKYYNANAAVYSEQLKAIDRQLGA 195 (231)
T ss_dssp EETTTTCCCC------BCCSSSSTTSBCCCGGGSHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCC------CCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 0111354555------4346765356761110165889999999999987638012579999999999778888999998
Q ss_pred HCCCCCCCEEEECCCHHHHHHHH
Q ss_conf 50300278146206215778987
Q gi|254780717|r 181 ILQPVEKKKIIVFHEAYRYFASH 203 (294)
Q Consensus 181 ~~~~~~~~~~i~~H~a~~Yf~~~ 203 (294)
.+++++..++-++-|-+.|=+|-
T Consensus 196 ~~~~i~~~~~~~~~~~~~~~~~~ 218 (231)
T 1xvl_A 196 DLEQVPEGPVPTFLDLLEYDARV 218 (231)
T ss_dssp HHTTSCSSSCCSHHHHHHHHHHH
T ss_pred HHHHCCCCCCCCHHHHHHHHHHH
T ss_conf 76427798867799999999999
No 2
>>1pq4_A Periplasmic binding protein component of AN ABC type zinc uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} (A:1-188,A:271-291)
Probab=100.00 E-value=3.7e-42 Score=287.75 Aligned_cols=166 Identities=26% Similarity=0.388 Sum_probs=149.6
Q ss_pred CCEEEEEECHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCEE
Q ss_conf 88059997228999999970794417887058998353356802456650257899967661035689997314557679
Q gi|254780717|r 22 GSLQVVVSIKPIHSIVSCIMQGIGTPALLVKGASSPHEYSLRISEAMMLENADIIFWLGAEMESFLVKPLHSLNKQSNVV 101 (294)
Q Consensus 22 ~~~~Vv~s~~pl~~lv~~I~gd~~~V~~L~~~g~dpH~y~~tp~d~~~l~~Adlii~~G~~~E~~~~~~~~~~~~~~~~i 101 (294)
++++||||++|+++++++|+||+++|++|+|+|+|||+|+|||+|+++|++||+|||+|.+||+|+.+.+....++.+++
T Consensus 1 ek~~VvtS~~pl~~lv~~I~gd~v~V~~l~~~g~dpH~ye~tp~d~~~l~~ADliv~~G~~lE~~~~~~~~~~~~~~~vi 80 (209)
T 1pq4_A 1 DAMDITVSIPPQQYFLEKIGGDLVRVSVLVPGNNDPHTYEPKPQQLAALSEAEAYVLIGLGFEQPWLEKLKAANANMKLI 80 (209)
T ss_dssp CCEEEEESSHHHHHHHHHHHGGGEEEEESSCTTSCGGGCCCCHHHHHHGGGCSEEEECCTTTTTTTHHHHHHHCSSSEEE
T ss_pred CCCEEEEECHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCCCC
T ss_conf 99789997589999999983893479981698989756768999999996499999958726789999998735788741
Q ss_pred EEEECCCCCCCCCC------------------------CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
Q ss_conf 97513544621001------------------------211123321224756776555567899999999742186565
Q gi|254780717|r 102 TLSHSPDLHRILLR------------------------DNHSHFHDSEADDLHLWLNPLNVQYIAHVIAMELIKKDPRNK 157 (294)
Q Consensus 102 ~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~dpH~Wl~p~n~~~~a~~I~~~L~~~dP~~~ 157 (294)
.++.+.+....... +++.++|+++..|||+||||.|++.++++|+++|+++||+++
T Consensus 81 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dPHiWldp~na~~~a~~Ia~~L~~~dP~~~ 160 (209)
T 1pq4_A 81 DSAQGITPLEMEKHDHSHGEEEGHDDHSHDGHDHGSESEKEKAKGALMVADPHIWLSPTLVKRQATTIAKELAELDPDNR 160 (209)
T ss_dssp ETTTTCCCCBSCC----------------------------------CCBCCCGGGCHHHHHHHHHHHHHHHHHHCGGGH
T ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHCCCCH
T ss_conf 00157230002345665532356544444565445543322224666889982556888999999999999988680138
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 889989999863122235899985030027
Q gi|254780717|r 158 IIYEKNEEEFKNQLSQLDKELHSILQPVEK 187 (294)
Q Consensus 158 ~~y~~N~~~~~~~L~~l~~~~~~~~~~~~~ 187 (294)
+.|++|+++|.++|++|++++++.++++.+
T Consensus 161 ~~y~~N~~~~~~~L~~Ld~~~~~~l~~i~~ 190 (209)
T 1pq4_A 161 DQYEANLAAFLAELERLNQELGQILQPLAD 190 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 999999999999999999999998643104
No 3
>>1toa_A Tromp-1, protein (periplasmic binding protein TROA); zinc binding protein, ABC transporter; 1.80A {Treponema pallidum} (A:1-195)
Probab=100.00 E-value=1.7e-41 Score=283.62 Aligned_cols=178 Identities=20% Similarity=0.211 Sum_probs=148.4
Q ss_pred CHHHHHHHHHHHHHHH-CC---------CCCCCEEEEEECHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHH
Q ss_conf 9158999999999960-01---------3238805999722899999997079441788705899835335680245665
Q gi|254780717|r 1 MKNFLIILIFLFFILS-SV---------ARAGSLQVVVSIKPIHSIVSCIMQGIGTPALLVKGASSPHEYSLRISEAMML 70 (294)
Q Consensus 1 Mkk~l~~~~~~~~~l~-~~---------~~~~~~~Vv~s~~pl~~lv~~I~gd~~~V~~L~~~g~dpH~y~~tp~d~~~l 70 (294)
||++++.++++++++. +| .+.++++||||++|++++|++|+||.++|++|+|+|.|||+|+|+|+|++++
T Consensus 6 mk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vvts~~p~~~~v~~I~gd~~~V~~l~~~~~dpH~y~p~p~d~~~l 85 (195)
T 1toa_A 6 HHHHDYDIPTTENLYFQGAMGSFGSKDAAADGKPLVVTTIGMIADAVKNIAQGDVHLKGLMGPGVDPHLYTATAGDVEWL 85 (195)
T ss_dssp -------------------------------CCCEEEESSHHHHHHHHHHHGGGSEEEESCCTTCCTTTCCCCHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHH
T ss_conf 45433577316999999997544785300069967999886999999998088258998059797965686899999999
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 02578999676610356899973145576799751354462100121112332122475677655556789999999974
Q gi|254780717|r 71 ENADIIFWLGAEMESFLVKPLHSLNKQSNVVTLSHSPDLHRILLRDNHSHFHDSEADDLHLWLNPLNVQYIAHVIAMELI 150 (294)
Q Consensus 71 ~~Adlii~~G~~~E~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~dpH~Wl~p~n~~~~a~~I~~~L~ 150 (294)
++||++||+|.++|+|+.+++.+..... ++...... ....+.++++++..|||+|+||.|+..++++|++.|+
T Consensus 86 ~~aDl~v~~G~~~e~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~~~~~~dpH~W~~p~~~~~~a~~i~~~L~ 158 (195)
T 1toa_A 86 GNADLILYNGLHLETKMGEVFSKLRGSR-LVVAVSET------IPVSQRLSLEEAEFDPHVWFDVKLWSYSVKAVYESLC 158 (195)
T ss_dssp HHCSEEEECCTTCSTTCHHHHHHHTTSS-EEEEGGGG------SCGGGSCBSTTSCBCCCGGGSHHHHHHHHHHHHHHHH
T ss_pred HCCCEEEECCCCCCHHHHHHHHHCCCCC-CCCCCCCC------CCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHH
T ss_conf 5599999928987747799998645777-65201444------2321123544222342023073368999999999999
Q ss_pred HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 21865658899899998631222358999850300
Q gi|254780717|r 151 KKDPRNKIIYEKNEEEFKNQLSQLDKELHSILQPV 185 (294)
Q Consensus 151 ~~dP~~~~~y~~N~~~~~~~L~~l~~~~~~~~~~~ 185 (294)
++||+++++|++|+++|.++|++|++++++.++++
T Consensus 159 ~ldP~~~~~y~~n~~~~~~~l~~l~~~~~~~l~~i 193 (195)
T 1toa_A 159 KLLPGKTREFTQRYQAYQQQLDKLDAYVRRKAQSL 193 (195)
T ss_dssp HHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 87676677887789999999999878999998753
No 4
>>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis} (A:1-189,A:284-312)
Probab=100.00 E-value=7.1e-41 Score=279.60 Aligned_cols=170 Identities=25% Similarity=0.409 Sum_probs=148.4
Q ss_pred CCCCCEEEEEECHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCC-
Q ss_conf 3238805999722899999997079441788705899835335680245665025789996766103568999731455-
Q gi|254780717|r 19 ARAGSLQVVVSIKPIHSIVSCIMQGIGTPALLVKGASSPHEYSLRISEAMMLENADIIFWLGAEMESFLVKPLHSLNKQ- 97 (294)
Q Consensus 19 ~~~~~~~Vv~s~~pl~~lv~~I~gd~~~V~~L~~~g~dpH~y~~tp~d~~~l~~Adlii~~G~~~E~~~~~~~~~~~~~- 97 (294)
+...+++||||++|++++|++|+||+++|++|+|+|+|||+|+|||+|++++++||+|||||.++|+|+.+++.+....
T Consensus 17 ~~~~~l~VvaT~~pl~divk~I~gd~~~V~~li~~g~dPH~yeptpsd~~~l~~ADlii~~G~~~E~~~~~~~~~~~~~~ 96 (218)
T 2o1e_A 17 SKGDKLHVVTTFYPXYEFTKQIVKDKGDVDLLIPSSVEPHDWEPTPKDIANIQDADLFVYNSEYXETWVPSAEKSXGQGH 96 (218)
T ss_dssp ----CEEEEESSHHHHHHHHHHHGGGEEEEESSCTTSCTTTCCCCHHHHHHHHHSSEEEESCTTTSTTHHHHHHTTCSSS
T ss_pred CCCCCCEEEEECHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHCCCCC
T ss_conf 56898589998789999999980894389980598989845658999999996699999878532778999998645678
Q ss_pred CCEEEEEECCCCCCCCC----CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 76799751354462100----12111233212247567765555678999999997421865658899899998631222
Q gi|254780717|r 98 SNVVTLSHSPDLHRILL----RDNHSHFHDSEADDLHLWLNPLNVQYIAHVIAMELIKKDPRNKIIYEKNEEEFKNQLSQ 173 (294)
Q Consensus 98 ~~~i~~~~~~~~~~~~~----~~~~~~~~~~~~~dpH~Wl~p~n~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~L~~ 173 (294)
..++.++.+.+...... ..++.+.++++..|||+|+||.|++.++.+|++.|++++|++++.|++|+++|.++|.+
T Consensus 97 ~~~i~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~dPHiWldp~n~~~~a~~I~~~L~~l~P~~~~~y~~N~~~~~~~l~~ 176 (218)
T 2o1e_A 97 AVFVNASKGIDLXEGSEEEHEEHDHGEHEHSHAXDPHVWLSPVLAQKEVKNITAQIVKQDPDNKEYYEKNSKEYIAKLQD 176 (218)
T ss_dssp CEEEETTTTCCCCCC----------------CCCCCGGGGSHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHH
T ss_pred CEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf 41343135720100122222345543344444567301039999999999999999776651205899999999987555
Q ss_pred HHHHHHHHCCCCCCC
Q ss_conf 358999850300278
Q gi|254780717|r 174 LDKELHSILQPVEKK 188 (294)
Q Consensus 174 l~~~~~~~~~~~~~~ 188 (294)
+++++++.++++++.
T Consensus 177 l~~~~~~~l~~ik~~ 191 (218)
T 2o1e_A 177 LDKLYRTTAKKAEGY 191 (218)
T ss_dssp HHHHHHHHHHSCSCH
T ss_pred HHHHHHHHHHCCCCH
T ss_conf 789998743302579
No 5
>>3hh8_A Metal ABC transporter substrate-binding lipoprotein; metal binding, cell membrane, copper, copper transport, ION transport; 1.87A {Streptococcus pyogenes serotype M1} PDB: 1psz_A (A:1-179)
Probab=100.00 E-value=2e-41 Score=283.09 Aligned_cols=175 Identities=26% Similarity=0.261 Sum_probs=152.1
Q ss_pred HHHHHHCCCCCCCEEEEEECHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHH
Q ss_conf 99996001323880599972289999999707944178870589983533568024566502578999676610356899
Q gi|254780717|r 11 LFFILSSVARAGSLQVVVSIKPIHSIVSCIMQGIGTPALLVKGASSPHEYSLRISEAMMLENADIIFWLGAEMESFLVKP 90 (294)
Q Consensus 11 ~~~~l~~~~~~~~~~Vv~s~~pl~~lv~~I~gd~~~V~~L~~~g~dpH~y~~tp~d~~~l~~Adlii~~G~~~E~~~~~~ 90 (294)
+....++.+..++++||||++|+++++++|+||+++|++|+|+|+|||+|+|+|+|+++|++||++||+|.+||+|+.++
T Consensus 5 ~~~~~~~~~~~~~~~Vvtt~~pl~~lvk~I~gd~~~V~~l~~~~~dpH~~e~~~~d~~~l~~ADl~~~~G~~~e~~~~~~ 84 (179)
T 3hh8_A 5 NSSTGAKTAKSDKLKVVATNSIIADMTKAIAGDKIDLHSIVPIGQDPHEYEPLPEDAEKTSNADVIFYNGINLEDGGQAW 84 (179)
T ss_dssp ----------CCSEEEEESSHHHHHHHHHHHGGGEEEEECSCTTSCSSSCCCCHHHHHHHHHCSEEEECCTTSSCSTTSH
T ss_pred CCCCCCCCCCCCCCEEEEECHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCHHHHHH
T ss_conf 88999875668984799977099999999809845999816999896666689999999708999998388620668999
Q ss_pred HHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
Q ss_conf 97314557679975135446210012111233212247567765555678999999997421865658899899998631
Q gi|254780717|r 91 LHSLNKQSNVVTLSHSPDLHRILLRDNHSHFHDSEADDLHLWLNPLNVQYIAHVIAMELIKKDPRNKIIYEKNEEEFKNQ 170 (294)
Q Consensus 91 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~dpH~Wl~p~n~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~ 170 (294)
+....++...+..............+++.++++++..|||+|+||.|++.++.+|++.|+++||+++++|++|+++|.++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpH~Wl~p~~~~~~a~~i~~~L~~~dP~~~~~y~~N~~~~~~~ 164 (179)
T 3hh8_A 85 FTKLVKNAQKTKNKDYFAVSDGIDVIYLEGASEKGKEDPHAWLNLENGIIYSKNIAKQLIAKDPKNKETYEKNLKAYVAK 164 (179)
T ss_dssp HHHHHHHTTCCBTTTEEETTTTSCCCBSTTCCSTTCBCCCGGGSHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_conf 99987531023687669842464334456655457877531589889999999999999876934279999879999998
Q ss_pred HHHHHHHHHHHCCCC
Q ss_conf 222358999850300
Q gi|254780717|r 171 LSQLDKELHSILQPV 185 (294)
Q Consensus 171 L~~l~~~~~~~~~~~ 185 (294)
|++|+.+++++++++
T Consensus 165 l~~l~~~~~~~~~~i 179 (179)
T 3hh8_A 165 LEKLDKEAKSKFDAI 179 (179)
T ss_dssp HHHHHHHHHHTTTTS
T ss_pred HHHHHHHHHHHHHHC
T ss_conf 888899999986422
No 6
>>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A (A:1-172)
Probab=100.00 E-value=1.3e-38 Score=265.30 Aligned_cols=161 Identities=29% Similarity=0.488 Sum_probs=138.1
Q ss_pred EEEEECHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCC-CEEEE
Q ss_conf 59997228999999970794417887058998353356802456650257899967661035689997314557-67997
Q gi|254780717|r 25 QVVVSIKPIHSIVSCIMQGIGTPALLVKGASSPHEYSLRISEAMMLENADIIFWLGAEMESFLVKPLHSLNKQS-NVVTL 103 (294)
Q Consensus 25 ~Vv~s~~pl~~lv~~I~gd~~~V~~L~~~g~dpH~y~~tp~d~~~l~~Adlii~~G~~~E~~~~~~~~~~~~~~-~~i~~ 103 (294)
+||||++|++++|++|+||+++|++|+|+|+|||+|+|+|+|+++|++||++||+|.+||+|+.+++.+..... .++..
T Consensus 1 tVv~s~~pl~~lv~~I~gd~~~v~~l~~~~~dpH~y~~~~~d~~~l~~Adl~i~~G~~~E~~~~~~~~~~~~~~~~~i~~ 80 (172)
T 2prs_A 1 AVVASLKPVGFIASAIADGVTETEVLLPDGASEHDYSLRPSDVKRLQNADLVVWVGPEMEAFMQKPVSKLPGAKQVTIAQ 80 (172)
T ss_dssp CEEESSHHHHHHHHHHHTTTSCEEESSCTTCBTTBCCCCTTHHHHHHHCSEEEECCTTTCGGGHHHHHTSCGGGEEEGGG
T ss_pred CEEEECHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHCCCCCCCCHHH
T ss_conf 98996479999999985996479980598989667868999999996699999918541788999998563678511113
Q ss_pred EECCCCCCCC----------CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 5135446210----------012111233212247567765555678999999997421865658899899998631222
Q gi|254780717|r 104 SHSPDLHRIL----------LRDNHSHFHDSEADDLHLWLNPLNVQYIAHVIAMELIKKDPRNKIIYEKNEEEFKNQLSQ 173 (294)
Q Consensus 104 ~~~~~~~~~~----------~~~~~~~~~~~~~~dpH~Wl~p~n~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~L~~ 173 (294)
+.+.+..... ...++.++++++..|||+|+||.|++.++++|++.|+++||++++.|++|+++|.++|.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dPH~Wldp~~~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~L~~ 160 (172)
T 2prs_A 81 LEDVKPLLMKSIHGDDDDHDHAEKSDEDHHHGDFNMHLWLSPEIARATAVAIHGKLVELMPQSRAKLDANLKDFEAQLAS 160 (172)
T ss_dssp CTTTGGGCCC---------------------CCCCCCGGGCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHH
T ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_conf 13655542123466554432223443222357776136646377899999999999864836566788899999988878
Q ss_pred HHHHHHHHCCCC
Q ss_conf 358999850300
Q gi|254780717|r 174 LDKELHSILQPV 185 (294)
Q Consensus 174 l~~~~~~~~~~~ 185 (294)
|++++++.++++
T Consensus 161 ld~~~~~~~~~i 172 (172)
T 2prs_A 161 TETQVGNELAPL 172 (172)
T ss_dssp HHHHHHHHHGGG
T ss_pred HHHHHHHHHCHH
T ss_conf 889999872424
No 7
>>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae} (A:1-176,A:262-284)
Probab=100.00 E-value=1.1e-38 Score=265.66 Aligned_cols=168 Identities=20% Similarity=0.304 Sum_probs=144.8
Q ss_pred CCCCCCEEEEEECHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCC
Q ss_conf 13238805999722899999997079441788705899835335680245665025789996766103568999731455
Q gi|254780717|r 18 VARAGSLQVVVSIKPIHSIVSCIMQGIGTPALLVKGASSPHEYSLRISEAMMLENADIIFWLGAEMESFLVKPLHSLNKQ 97 (294)
Q Consensus 18 ~~~~~~~~Vv~s~~pl~~lv~~I~gd~~~V~~L~~~g~dpH~y~~tp~d~~~l~~Adlii~~G~~~E~~~~~~~~~~~~~ 97 (294)
.++.++++||||++|+++++++|+||+++|++|+ ||+|||+|+|+|+|+++|.+||+||++|.+||+|+.+++......
T Consensus 5 ~~~~~~~~VVtS~~pl~~ivk~I~gd~v~V~~l~-pg~dPH~yeptp~di~~i~~ADliv~~G~~~E~~~~~~~~~~~~~ 83 (199)
T 3cx3_A 5 SQTGKGXKIVTSFYPIYAXVKEVSGDLNDVRXIQ-SSSGIHSFEPSANDIAAIYDADVFVYHSHTLESWAGSLDPNLKKS 83 (199)
T ss_dssp --CCSCCEEEESSHHHHHHHHHHHTTSSEEEECC-CCSCTTTCCCCHHHHHHHHHSSEEEESCTTTSCTTTTCCTTTTTC
T ss_pred CCCCCCCEEEEECHHHHHHHHHHCCCCCEEEECC-CCCCCCCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCC
T ss_conf 7789996899987899999999749961499728-998986244799999998559999990886368899999976402
Q ss_pred -CCEEEEEECCCCCCCC---CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf -7679975135446210---012111233212247567765555678999999997421865658899899998631222
Q gi|254780717|r 98 -SNVVTLSHSPDLHRIL---LRDNHSHFHDSEADDLHLWLNPLNVQYIAHVIAMELIKKDPRNKIIYEKNEEEFKNQLSQ 173 (294)
Q Consensus 98 -~~~i~~~~~~~~~~~~---~~~~~~~~~~~~~~dpH~Wl~p~n~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~L~~ 173 (294)
..++.++.+....... ...+++++++++..|||+|+||.|++.++.+|+++|++++|++++.|++|+++|.++|.+
T Consensus 84 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dPHiWldp~n~~~~a~~I~~~L~~~~P~~k~~y~~N~~~~~~~L~~ 163 (199)
T 3cx3_A 84 KVKVLEASEGXTLERVPGLEDVEAGDGVDEKTLYDPHTWLDPEKAGEEAQIIADKLSEVDSEHKETYQKNAQAFIKKAQE 163 (199)
T ss_dssp CCEEEETTTTCCCCBCCC-------------CCBCCCGGGSHHHHHHHHHHHHHHHHHHSGGGHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 55302210100001367633444555422135775014036401788999899898765033278899999999877655
Q ss_pred HHHHHHHHCCCCC
Q ss_conf 3589998503002
Q gi|254780717|r 174 LDKELHSILQPVE 186 (294)
Q Consensus 174 l~~~~~~~~~~~~ 186 (294)
|++++++.++.++
T Consensus 164 L~~~~~~~l~~~p 176 (199)
T 3cx3_A 164 LTKKFQPKFEKAT 176 (199)
T ss_dssp HHHHHHHHHHSCS
T ss_pred HHHHHHHHHHHCC
T ss_conf 5588987653125
No 8
>>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A (A:1-177)
Probab=100.00 E-value=5.7e-38 Score=261.17 Aligned_cols=166 Identities=21% Similarity=0.297 Sum_probs=141.1
Q ss_pred CCCCCEEEEEECHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCC
Q ss_conf 32388059997228999999970794417887058998353356802456650257899967661035689997314557
Q gi|254780717|r 19 ARAGSLQVVVSIKPIHSIVSCIMQGIGTPALLVKGASSPHEYSLRISEAMMLENADIIFWLGAEMESFLVKPLHSLNKQS 98 (294)
Q Consensus 19 ~~~~~~~Vv~s~~pl~~lv~~I~gd~~~V~~L~~~g~dpH~y~~tp~d~~~l~~Adlii~~G~~~E~~~~~~~~~~~~~~ 98 (294)
+..++++||||++|++++|++|+||.++|+ |+|+|+|||+|+|+|+|+++|++||++||+|.+||+|+.+++.+...+.
T Consensus 8 ~~~~~~~Vv~s~~pl~~~v~~I~gd~~~~~-li~~g~dpH~~e~~p~d~~~i~~ADlvv~~G~~~e~~~~~~~~~~~~~~ 86 (177)
T 3gi1_A 8 QPTQGMSVVTSFYPMYAMTKEVSGDLNDVR-MIQSGAGIHSFEPSVNDVAAIYDADLFVYHSHTLEAWARDLDPNLKKSK 86 (177)
T ss_dssp --CCSCEEEESSHHHHHHHHHHHTTSSEEE-EC-----CCSCCCCHHHHHHHHTSSEEEESCTTTSGGGTTCCTTTTTCC
T ss_pred CCCCCCEEEEECHHHHHHHHHHCCCCEEEE-ECCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCC
T ss_conf 788984899987899999999818950699-7289989776768999999985599999949974078999998534567
Q ss_pred CEEEE-EECCCCCC---CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 67997-51354462---100121112332122475677655556789999999974218656588998999986312223
Q gi|254780717|r 99 NVVTL-SHSPDLHR---ILLRDNHSHFHDSEADDLHLWLNPLNVQYIAHVIAMELIKKDPRNKIIYEKNEEEFKNQLSQL 174 (294)
Q Consensus 99 ~~i~~-~~~~~~~~---~~~~~~~~~~~~~~~~dpH~Wl~p~n~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~L~~l 174 (294)
..+.. ........ ....+++.+.++++..|||+|+||.|++.++.+|++.|+++||++++.|++|+++|.++|++|
T Consensus 87 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpH~W~~p~~~~~~a~~i~~~L~~~dP~~~~~y~~n~~~~~~~l~~l 166 (177)
T 3gi1_A 87 VDVFEASKPLTLDRVKGLEDMEVTQGIDPATLYDPHTWTDPVLAGEEAVNIAKELGRLDPKHKDSYTKNAKAFKKEAEQL 166 (177)
T ss_dssp CEEEETTTTSCCCBCC---------------CBCCCGGGSHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 31331345544332256664334434455789998804789999999999999997427677899999999999999999
Q ss_pred HHHHHHHCCCC
Q ss_conf 58999850300
Q gi|254780717|r 175 DKELHSILQPV 185 (294)
Q Consensus 175 ~~~~~~~~~~~ 185 (294)
++++++.++++
T Consensus 167 ~~~~~~~~~~i 177 (177)
T 3gi1_A 167 TEEYTQKFKKV 177 (177)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHHHH
T ss_conf 99999998653
No 9
>>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A (A:173-284)
Probab=99.90 E-value=2.1e-23 Score=168.62 Aligned_cols=109 Identities=29% Similarity=0.575 Sum_probs=103.6
Q ss_pred CCCEEEECCCHHHHHHHHCCCCEEC-CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCEEEE
Q ss_conf 2781462062157789874981200-346775444978899999999754993899818889789999999719908998
Q gi|254780717|r 186 EKKKIIVFHEAYRYFASHYNLSIVT-FPMSHSVFMGAASLRNIRSKIISDKISCLFYGPEFDSKIIRSITNDTGVMSAIL 264 (294)
Q Consensus 186 ~~~~~i~~H~a~~Yf~~~~gl~~~~-~~~~~~~~~s~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~~~~~l 264 (294)
++|.++++|++|+||+++|||++.+ ++.+++.+||++++.++++.+|+++++|||.|++.+++.++.|++++|++++.+
T Consensus 1 k~~~~v~~H~a~~Y~~~~~gl~~~~~~~~~~~~~ps~~~l~~l~~~ik~~~i~~i~~e~~~~~~~~~~la~~~~~~~~~l 80 (112)
T 2prs_A 1 KGKGYFVFHDAYGYFEKQFGLTPLGHFTVNPEIQPGAQRLHEIRTQLVEQKATCVFAEPQFRPAVVESVARGTSVRMGTL 80 (112)
T ss_dssp TTCCEEEEESCCHHHHHHHTCCCCEEEESSTTSCCCHHHHHHHHHHHHHTTCCEEEECTTSCSHHHHHHTTTSCCEEEEC
T ss_pred HCCCEEECCCHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCEEEE
T ss_conf 33740101624899999739925567611455577888999999987734983899968889299999999809977984
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 053367877816789999999999987419
Q gi|254780717|r 265 DPEGMLIAEGPELYFQLMRSMSNSIAKNCS 294 (294)
Q Consensus 265 d~~~~~~~~~~~~Y~~~m~~n~~~l~k~ls 294 (294)
||++.....++++|+++|++|+++|.++|+
T Consensus 81 d~l~~~~~~~~~~Y~~~m~~n~~~l~~~l~ 110 (112)
T 2prs_A 81 DPLGTNIKLGKTSYSEFLSQLANQYASCLK 110 (112)
T ss_dssp CTTCTTSCCSTTHHHHHHHHHHHHHHHHHS
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 477567777704299999999999999867
No 10
>>3hh8_A Metal ABC transporter substrate-binding lipoprotein; metal binding, cell membrane, copper, copper transport, ION transport; 1.87A {Streptococcus pyogenes serotype M1} PDB: 1psz_A (A:180-294)
Probab=99.90 E-value=7.5e-23 Score=165.13 Aligned_cols=110 Identities=16% Similarity=0.284 Sum_probs=102.1
Q ss_pred CCCCEEEECCCHHHHHHHHCCCCEEC-CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCEEE
Q ss_conf 02781462062157789874981200-34677544497889999999975499389981888978999999971990899
Q gi|254780717|r 185 VEKKKIIVFHEAYRYFASHYNLSIVT-FPMSHSVFMGAASLRNIRSKIISDKISCLFYGPEFDSKIIRSITNDTGVMSAI 263 (294)
Q Consensus 185 ~~~~~~i~~H~a~~Yf~~~~gl~~~~-~~~~~~~~~s~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~~~~~ 263 (294)
.+++.|+++||+|+||+++|||++.+ ++.+++.+||+++|.++++.+|+++++|||+|++++++.++.|++++|++++.
T Consensus 2 ~~~~~~~~~H~af~Y~~~~ygl~~~~~~~~~~~~eps~~~i~~l~~~ik~~~i~~if~e~~~~~~~~~~ia~~~~~~~~~ 81 (115)
T 3hh8_A 2 ENKKLIVTSEGCFKYFSKAYGVPSAYIWEINTEEEGTPDQISSLIEKLKVIKPSALFVESSVDRRPMETVSKDSGIPIYS 81 (115)
T ss_dssp GGGCCEEEEESCCHHHHHHHTCCEEEEESSCCSCCCCHHHHHHHHHHHHHSCCSCEEEETTSCSHHHHHHHHHHCCCEEE
T ss_pred CCCEEEEEECHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCEEC
T ss_conf 45547886161789999986983103556577655577999999999760587589973889939999999980997641
Q ss_pred ECCCCCCCCCCC--CCHHHHHHHHHHHHHHHCC
Q ss_conf 805336787781--6789999999999987419
Q gi|254780717|r 264 LDPEGMLIAEGP--ELYFQLMRSMSNSIAKNCS 294 (294)
Q Consensus 264 ld~~~~~~~~~~--~~Y~~~m~~n~~~l~k~ls 294 (294)
+||++...+.++ .+|+++|+.|+++|.++|.
T Consensus 82 l~pl~~~~e~~~~~~~Y~~~m~~n~~~l~~al~ 114 (115)
T 3hh8_A 82 EIFTDSIAKKGKPGDSYYAMMKWNLDKISEGLA 114 (115)
T ss_dssp EECSSSCCCTTSTTCSHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 146556778898747799999999999999867
No 11
>>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A (A:178-286)
Probab=99.89 E-value=8.3e-23 Score=164.84 Aligned_cols=107 Identities=18% Similarity=0.288 Sum_probs=100.4
Q ss_pred CCCEEEECCCHHHHHHHHCCCCEEC-CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCEEEE
Q ss_conf 2781462062157789874981200-346775444978899999999754993899818889789999999719908998
Q gi|254780717|r 186 EKKKIIVFHEAYRYFASHYNLSIVT-FPMSHSVFMGAASLRNIRSKIISDKISCLFYGPEFDSKIIRSITNDTGVMSAIL 264 (294)
Q Consensus 186 ~~~~~i~~H~a~~Yf~~~~gl~~~~-~~~~~~~~~s~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~~~~~l 264 (294)
++|.++++||+|+||+++|||++.+ ++.+++.+||++++.++++.+|+++|+|||+|++++++.++.|++++|++++.+
T Consensus 1 k~~~~~~~H~af~Yl~~~ygl~~~~~~~~~~~~~ps~~~i~~l~~~ik~~~i~~i~~e~~~~~~~~~~ia~~~~~~~~~l 80 (109)
T 3gi1_A 1 RSKTFVTQHTAFSYLAKRFGLKQLGISGISPEQEPSPRQLKEIQDFVKEYNVKTIFAEDNVNPKIAHAIAKSTGAKVKTL 80 (109)
T ss_dssp SCCEEEEEESCCHHHHHHTTCEEEEEECSCC---CCHHHHHHHHHHHHHTTCCEEEECTTSCTHHHHHHHHTTTCEEEEC
T ss_pred CCCCEEEECCHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCEEEE
T ss_conf 27746851605678999769827632566876789989999999999975998899958899399999999829987874
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf 05336787781678999999999998741
Q gi|254780717|r 265 DPEGMLIAEGPELYFQLMRSMSNSIAKNC 293 (294)
Q Consensus 265 d~~~~~~~~~~~~Y~~~m~~n~~~l~k~l 293 (294)
||++...+.+ .+|+++|+.|+++|.++|
T Consensus 81 ~~l~~~~~~~-~~Y~~~m~~n~~~l~~aL 108 (109)
T 3gi1_A 81 SPLEAAPSGN-KTYLENLRANLEVLYQQL 108 (109)
T ss_dssp CCSCSCCSSS-CCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCC-CCHHHHHHHHHHHHHHHH
T ss_conf 7776788886-659999999999999971
No 12
>>1toa_A Tromp-1, protein (periplasmic binding protein TROA); zinc binding protein, ABC transporter; 1.80A {Treponema pallidum} (A:196-313)
Probab=99.89 E-value=4.3e-23 Score=166.66 Aligned_cols=109 Identities=15% Similarity=0.312 Sum_probs=99.8
Q ss_pred CCCEEEECCCHHHHHHHHCCCCEEC-CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCEEEE
Q ss_conf 2781462062157789874981200-346775444978899999999754993899818889789999999719908998
Q gi|254780717|r 186 EKKKIIVFHEAYRYFASHYNLSIVT-FPMSHSVFMGAASLRNIRSKIISDKISCLFYGPEFDSKIIRSITNDTGVMSAIL 264 (294)
Q Consensus 186 ~~~~~i~~H~a~~Yf~~~~gl~~~~-~~~~~~~~~s~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~~~~~l 264 (294)
++|.++++|++|+||+++|||++.+ ++.+++.+||+++|.++++.+|+++|+|||.|++++++.++.|++++|++++++
T Consensus 1 k~r~~v~~H~af~Y~~~~ygl~~~~~~~~~~~~~ps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~ia~~~~~~~~~l 80 (118)
T 1toa_A 1 ERRVLVTAHDAFGYFSRAYGFEVKGLQGVSTASEASAHDMQELAAFIAQRKLPAIFIESSIPHKNVEALRDAVQARGHVV 80 (118)
T ss_dssp GGCEEEEEESCCHHHHHHHTCEEEEEECSSCSSCCCHHHHHHHHHHHHHTTCSEEEEETTSCTHHHHHHHHHHHTTTCCC
T ss_pred CCEEEEECCCCHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCEEE
T ss_conf 55145411541034666338540101234443012147999999999864996899848999089999999857884132
Q ss_pred CCCCCC-------CCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 053367-------877816789999999999987419
Q gi|254780717|r 265 DPEGML-------IAEGPELYFQLMRSMSNSIAKNCS 294 (294)
Q Consensus 265 d~~~~~-------~~~~~~~Y~~~m~~n~~~l~k~ls 294 (294)
||++.. ...++++|+++|+.|+++|.++|+
T Consensus 81 ~p~~~l~~d~l~~~~~~~~~Y~~~m~~n~~~l~~aL~ 117 (118)
T 1toa_A 81 QIGGELFSDAMGDAGTSEGTYVGMVTHNIDTIVAALA 117 (118)
T ss_dssp EEEEEECSSSCCCTTSGGGSHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 5577235444567788867799999999999999867
No 13
>>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} (A:202-291)
Probab=99.78 E-value=9.2e-19 Score=139.13 Aligned_cols=87 Identities=11% Similarity=0.246 Sum_probs=82.3
Q ss_pred CCCEEEECCCHHHHHHHHCCCCEEC-CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCEEEE
Q ss_conf 2781462062157789874981200-346775444978899999999754993899818889789999999719908998
Q gi|254780717|r 186 EKKKIIVFHEAYRYFASHYNLSIVT-FPMSHSVFMGAASLRNIRSKIISDKISCLFYGPEFDSKIIRSITNDTGVMSAIL 264 (294)
Q Consensus 186 ~~~~~i~~H~a~~Yf~~~~gl~~~~-~~~~~~~~~s~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~~~~~l 264 (294)
++|.++++||+|+||+++|||++.+ ++.+++.+||+++|.++++.+|+++++|||+|++.+++.++.|++++|++++.+
T Consensus 2 k~k~~v~~H~af~Yf~~~ygl~~~~~~~~~~~~eps~~~i~~l~~~ik~~~i~~if~e~~~~~k~~~~ia~~~g~~v~~l 81 (90)
T 1xvl_A 2 NQRFLVSCEGAFSYLARDYGMEEIYMWPINAEQQFTPKQVQTVIEEVKTNNVPTIFCESTVSDKGQKQVAQATGARFGGN 81 (90)
T ss_dssp GGCEEEEEESTTHHHHHHTTCEEEEEESSSSSCSCCHHHHHHHHHHHHTTTCSEEEEETTSCSHHHHHHHTTTCCEEEEE
T ss_pred CCEEEEEECCCHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCCCC
T ss_conf 55089994441146898679836640266887789988999999987634885899738899199999999859971363
Q ss_pred CCCCCCCC
Q ss_conf 05336787
Q gi|254780717|r 265 DPEGMLIA 272 (294)
Q Consensus 265 d~~~~~~~ 272 (294)
||++..++
T Consensus 82 ~~~~~~~~ 89 (90)
T 1xvl_A 82 LYVDSLST 89 (90)
T ss_dssp ECSSCCCC
T ss_pred CCCCCCCC
T ss_conf 21036888
No 14
>>1pq4_A Periplasmic binding protein component of AN ABC type zinc uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} (A:189-270)
Probab=99.77 E-value=2.2e-18 Score=136.73 Aligned_cols=81 Identities=26% Similarity=0.453 Sum_probs=77.7
Q ss_pred CCEEEECCCHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCEEEECC
Q ss_conf 78146206215778987498120034677544497889999999975499389981888978999999971990899805
Q gi|254780717|r 187 KKKIIVFHEAYRYFASHYNLSIVTFPMSHSVFMGAASLRNIRSKIISDKISCLFYGPEFDSKIIRSITNDTGVMSAILDP 266 (294)
Q Consensus 187 ~~~~i~~H~a~~Yf~~~~gl~~~~~~~~~~~~~s~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~~~~~ld~ 266 (294)
+|.++++||+|+||+++|||++.+ .++++.+||++++.++++.+|+++|+|||+|++.+++.++.|++++|++++.|||
T Consensus 2 ~r~~v~~H~af~Y~a~~ygl~~~~-~i~~~~eps~~~i~~l~~~ik~~~i~~if~e~~~~~k~~~~ia~etg~~~~~ld~ 80 (82)
T 1pq4_A 2 QRKFIVFHPSWAYFARDYNLVQIP-IEVEGQEPSAQELKQLIDTAKENNLTMVFGETQFSTKSSEAIAAEIGAGVELLDP 80 (82)
T ss_dssp CCEEEESSCCCHHHHHHTTCEEEE-SCBTTBCCCHHHHHHHHHHHHTTTCCEEEEETTSCCHHHHHHHHHHTCEEEEECT
T ss_pred CCCEEECCCHHHHHHHHCCCCEEE-CCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCEEEECC
T ss_conf 773120274089999967993520-4467889998999999999997499889972899919999999980998798788
Q ss_pred CC
Q ss_conf 33
Q gi|254780717|r 267 EG 268 (294)
Q Consensus 267 ~~ 268 (294)
||
T Consensus 81 l~ 82 (82)
T 1pq4_A 81 LA 82 (82)
T ss_dssp TC
T ss_pred CC
T ss_conf 72
No 15
>>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae} (A:177-261)
Probab=99.76 E-value=1.1e-18 Score=138.75 Aligned_cols=84 Identities=21% Similarity=0.310 Sum_probs=80.0
Q ss_pred CCEEEECCCHHHHHHHHCCCCEEC-CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEC
Q ss_conf 781462062157789874981200-3467754449788999999997549938998188897899999997199089980
Q gi|254780717|r 187 KKKIIVFHEAYRYFASHYNLSIVT-FPMSHSVFMGAASLRNIRSKIISDKISCLFYGPEFDSKIIRSITNDTGVMSAILD 265 (294)
Q Consensus 187 ~~~~i~~H~a~~Yf~~~~gl~~~~-~~~~~~~~~s~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~~~~~ld 265 (294)
+|.++++|+||+||+++|||++.+ ++.+++.+||++++.++++.+|+++|+|||.|++.+++.++.|++++|++++.||
T Consensus 1 ~r~~v~~H~af~Y~~~~ygl~~~~~~~~~~~~~ps~~~i~~~~~~ik~~~i~~If~e~~~~~k~~~~ia~e~g~~~~~ld 80 (85)
T 3cx3_A 1 QKTFVTQHTAFSYLAKRFGLNQLGIAGISPEQEPSPRQLTEIQEFVKTYKVKTIFTESNASSKVAETLVKSTGVGLKTLN 80 (85)
T ss_dssp CCCEEEEESCCHHHHHHTTCCEEEEECSSTTCCCCSHHHHHHHHHHHHTTCCCEEECSSSCCHHHHHHHSSSSCCEEECC
T ss_pred CCEEEEECCCCCHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEC
T ss_conf 53189966752026886596687504667644522568999998752467559998488991999999998099868857
Q ss_pred CCCCC
Q ss_conf 53367
Q gi|254780717|r 266 PEGML 270 (294)
Q Consensus 266 ~~~~~ 270 (294)
|++.+
T Consensus 81 pl~~d 85 (85)
T 3cx3_A 81 PLESD 85 (85)
T ss_dssp CSSSC
T ss_pred CCCCC
T ss_conf 77678
No 16
>>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis} (A:190-271)
Probab=99.76 E-value=2.1e-18 Score=136.83 Aligned_cols=81 Identities=23% Similarity=0.395 Sum_probs=77.9
Q ss_pred CCEEEECCCHHHHHHHHCCCCEEC-CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEC
Q ss_conf 781462062157789874981200-3467754449788999999997549938998188897899999997199089980
Q gi|254780717|r 187 KKKIIVFHEAYRYFASHYNLSIVT-FPMSHSVFMGAASLRNIRSKIISDKISCLFYGPEFDSKIIRSITNDTGVMSAILD 265 (294)
Q Consensus 187 ~~~~i~~H~a~~Yf~~~~gl~~~~-~~~~~~~~~s~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~~~~~ld 265 (294)
+|.++++||+|+||+++|||++.+ ++.+++.+||++++.++++.+|+++|+|||+|++++++.++.|++++|+++++||
T Consensus 1 ~r~~v~~H~af~Yf~~~ygl~~~~~~~~~~~~~ps~~~i~~l~~~ik~~~i~~if~e~~~~~k~~~~ia~~~g~~v~~ld 80 (82)
T 2o1e_A 1 KKEFITQHTAFGYLAKEYGLKQVPIAGLSPDQEPSAASLAKLKTYAKEHNVKVIYFEEIASSKVADTLASEIGAKTEVLN 80 (82)
T ss_dssp CCEEEESSCTTHHHHHHTTCEEEECSSCCSSSCCCHHHHHHHHHHTTSSCCCEEECSSCCCHHHHHHHHHHTCCEEECCC
T ss_pred CCEEEEECCHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEC
T ss_conf 64158852136668874684476402356522213357999998765258868999488894999999997199765545
Q ss_pred CC
Q ss_conf 53
Q gi|254780717|r 266 PE 267 (294)
Q Consensus 266 ~~ 267 (294)
||
T Consensus 81 pl 82 (82)
T 2o1e_A 81 TL 82 (82)
T ss_dssp CT
T ss_pred CC
T ss_conf 65
No 17
>>1m1n_A Nitrogenase molybdenum-iron protein alpha chain; atomic resolution, FEMO cofactor, nitrogen fixation, central nitrogen ligand; HET: HCA CLF CFN; 1.16A {Azotobacter vinelandii} (A:1-55,A:299-491)
Probab=82.15 E-value=3.7 Score=20.99 Aligned_cols=146 Identities=11% Similarity=0.079 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECC-----CHHHHHHHHCCC
Q ss_conf 65555678999999997421865658-899899998631222358999850300278146206-----215778987498
Q gi|254780717|r 133 LNPLNVQYIAHVIAMELIKKDPRNKI-IYEKNEEEFKNQLSQLDKELHSILQPVEKKKIIVFH-----EAYRYFASHYNL 206 (294)
Q Consensus 133 l~p~n~~~~a~~I~~~L~~~dP~~~~-~y~~N~~~~~~~L~~l~~~~~~~~~~~~~~~~i~~H-----~a~~Yf~~~~gl 206 (294)
+-+.........|++.+..-.|+..+ ...+...++...++.. +. .+.++.++++- -++..|.+++|+
T Consensus 56 iG~~~T~~~Lr~Ia~~fg~~i~~~~E~~Ia~e~~~~~~~l~~~----~~---~l~Gkrv~I~~~~~~~~~~~~~l~ELGm 128 (248)
T 1m1n_A 56 FGPTKTIESLRAIAAKFDESIQKKCEEVIAKYKPEWEAVVAKY----RP---RLEGKRVMLYIGGLRPRHVIGAYEDLGM 128 (248)
T ss_dssp SSHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHH----HH---HHTTCEEEECBSSSHHHHTHHHHHTTTC
T ss_pred CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH----HH---HHCCCEEEEECCCHHHHHHHHHHHHCCC
T ss_conf 7336899999999998588506789999999999999999999----98---7179836773685117999999998799
Q ss_pred CEECCC--CCCC---------CCC-----CHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCEEEECCCCCC
Q ss_conf 120034--6775---------444-----978899999999754993899818889789999999719908998053367
Q gi|254780717|r 207 SIVTFP--MSHS---------VFM-----GAASLRNIRSKIISDKISCLFYGPEFDSKIIRSITNDTGVMSAILDPEGML 270 (294)
Q Consensus 207 ~~~~~~--~~~~---------~~~-----s~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~~~~~ld~~~~~ 270 (294)
++..+. ..+. ... ...+..++.+.++..+...+|... .-+.++++.|++.+.+.+....
T Consensus 129 ~vv~~~~~~~~~~~~~~~~~~l~~~~~i~dd~d~~E~~~~i~~~~PDLi~g~~-----~ek~~a~k~giP~~~~~~~d~~ 203 (248)
T 1m1n_A 129 EVVGTGYEFAHNDDYDRTMKEMGDSTLLYDDVTGYEFEEFVKRIKPDLIGSGI-----KEKFIFQKMGIPFREMHSWDYS 203 (248)
T ss_dssp EEEEEEESSCCHHHHHTTTTTSCTTCEEEESCBHHHHHHHHHHHCCSEEEECH-----HHHHHHHHTTCCEEESSSGGGC
T ss_pred EEEEEEECCCCHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHCCCCEEEECC-----CHHHHHHHCCCCEEECCCCCCC
T ss_conf 79999705787789999998679987897389999999999853999999898-----4079999829997007765468
Q ss_pred CC-CCCCCHHHHHHHHHHHHH
Q ss_conf 87-781678999999999998
Q gi|254780717|r 271 IA-EGPELYFQLMRSMSNSIA 290 (294)
Q Consensus 271 ~~-~~~~~Y~~~m~~n~~~l~ 290 (294)
.+ -|.++-..+++...+.+.
T Consensus 204 ~py~Gy~Ga~~la~~i~~al~ 224 (248)
T 1m1n_A 204 GPYHGFDGFAIFARDMDMTLN 224 (248)
T ss_dssp CCCSHHHHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHHHH
T ss_conf 885358669999999999974
No 18
>>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, binary complex; HET: GDP; 2.40A {Mycobacterium smegmatis str} PDB: 2gej_A* (A:198-366)
Probab=77.97 E-value=2.6 Score=21.96 Aligned_cols=99 Identities=16% Similarity=0.094 Sum_probs=60.8
Q ss_pred CCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 53356802456650257899967661035689997314557679975135446210012111233212247567765555
Q gi|254780717|r 58 HEYSLRISEAMMLENADIIFWLGAEMESFLVKPLHSLNKQSNVVTLSHSPDLHRILLRDNHSHFHDSEADDLHLWLNPLN 137 (294)
Q Consensus 58 H~y~~tp~d~~~l~~Adlii~~G~~~E~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~dpH~Wl~p~n 137 (294)
|.|.+......-+..+|+++......|++=-..++.+.-...++ .++..+......... -.+..++.+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~lEama~G~pvi-~~~~~~~~~~~~~~~-----------~g~~~~~~d 138 (169)
T 2gek_A 71 LGQVDDATKASAMRSADVYCAPHLGGESFGIVLVEAMAAGTAVV-ASDLDAFRRVLADGD-----------AGRLVPVDD 138 (169)
T ss_dssp CCSCCHHHHHHHHHHSSEEEECCCSCCSSCHHHHHHHHHTCEEE-ECCCHHHHHHHTTTT-----------SSEECCTTC
T ss_pred EEECCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEE-EECCCCHHHHHCCCC-----------EEEEECCCC
T ss_conf 74023310111012332222222343567540022113684199-828997688730796-----------399977999
Q ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
Q ss_conf 678999999997421865658899899998631
Q gi|254780717|r 138 VQYIAHVIAMELIKKDPRNKIIYEKNEEEFKNQ 170 (294)
Q Consensus 138 ~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~ 170 (294)
...+++.|...+ .+|+......+|+.++.++
T Consensus 139 ~~~~~~~i~~l~--~~~~~~~~~~~~a~~~~~k 169 (169)
T 2gek_A 139 ADGMAAALIGIL--EDDQLRAGYVARASERVHR 169 (169)
T ss_dssp HHHHHHHHHHHH--HCHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHH
T ss_conf 999999999997--6999999999999999996
No 19
>>3lhs_A Ferrichrome ABC transporter lipoprotein; siderophore, iron, receptor, binding protein, transport protein; HET: SF8; 1.30A {Staphylococcus aureus subsp} PDB: 3eiw_A 3eix_A* 3li2_A* (A:1-160,A:273-296)
Probab=61.88 E-value=11 Score=17.90 Aligned_cols=51 Identities=18% Similarity=0.051 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECC
Q ss_conf 555678999999997421865658899899998631222358999850300278146206
Q gi|254780717|r 135 PLNVQYIAHVIAMELIKKDPRNKIIYEKNEEEFKNQLSQLDKELHSILQPVEKKKIIVFH 194 (294)
Q Consensus 135 p~n~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~L~~l~~~~~~~~~~~~~~~~i~~H 194 (294)
+..+......+++.|.+ +.+++++.+.+++--+.+++.+.+.+.|.+++++
T Consensus 119 ~~~~~~~i~~lg~i~g~---------e~~Ae~l~~~~~~~i~~i~~~~~~~~~~~~~~~~ 169 (184)
T 3lhs_A 119 YKQNINSFKTIAKALNK---------EKEGEKRLAEHDKLINKYKDEIKFDRSRGLISSE 169 (184)
T ss_dssp HHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHHHHHCCSCTTCSHHHHH
T ss_pred HHHHHHHHHHHHHHHCC---------CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
T ss_conf 99999999999999596---------0667999988999999999860013372099999
No 20
>>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} (A:174-357)
Probab=60.46 E-value=12 Score=17.74 Aligned_cols=93 Identities=12% Similarity=0.179 Sum_probs=57.1
Q ss_pred HHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 24566502578999676610356899973145576799751354462100121112332122475677655556789999
Q gi|254780717|r 65 SEAMMLENADIIFWLGAEMESFLVKPLHSLNKQSNVVTLSHSPDLHRILLRDNHSHFHDSEADDLHLWLNPLNVQYIAHV 144 (294)
Q Consensus 65 ~d~~~l~~Adlii~~G~~~E~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~dpH~Wl~p~n~~~~a~~ 144 (294)
.-..-++.||+++.. ...|++-..+++.+.-...+| .++..+....... ..+-.++.++.+...+++.
T Consensus 90 ~~~~~~~~ad~~v~~-~~~e~~~~~~~Ea~a~G~Pvi-~~~~~~~~e~v~~----------~~~g~~~~~~~~~~~~~~~ 157 (184)
T 2iw1_A 90 DVSELMAAADLLLHP-AYQEAAGIVLLEAITAGLPVL-TTAVCGYAHYIAD----------ANCGTVIAEPFSQEQLNEV 157 (184)
T ss_dssp CHHHHHHHCSEEEEC-CSCCSSCHHHHHHHHHTCCEE-EETTSTTTHHHHH----------HTCEEEECSSCCHHHHHHH
T ss_pred CCCCCCCCCCCCCCC-CCCCCCCCEEEECCCCCEEEE-ECCCCCHHHHHCC----------CCCEEEECCCCCHHHHHHH
T ss_conf 444222333344432-222343302331003560466-1489975888416----------9826998699999999999
Q ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 999974218656588998999986312
Q gi|254780717|r 145 IAMELIKKDPRNKIIYEKNEEEFKNQL 171 (294)
Q Consensus 145 I~~~L~~~dP~~~~~y~~N~~~~~~~L 171 (294)
|...+ .+|+....+.+|+.++.++-
T Consensus 158 i~~l~--~~~~~~~~~~~~a~~~~~~~ 182 (184)
T 2iw1_A 158 LRKAL--TQSPLRMAWAENARHYADTQ 182 (184)
T ss_dssp HHHHH--HCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHH--CCHHHHHHHHHHHHHHHHHC
T ss_conf 99997--69999999999999999973
No 21
>>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial precursor; middle-chain acyl-COA synthetase, xenobiotic/medium-chain fatty acid-COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A* (A:76-198)
Probab=60.41 E-value=12 Score=17.73 Aligned_cols=112 Identities=9% Similarity=0.120 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHHHHHHHHCC-CCCCCEEEECCCHHHHHHHHCCCCEEC---CCCCCCCCCCHHHHHHHHHHHHHCCCCEE
Q ss_conf 99986312223589998503-002781462062157789874981200---34677544497889999999975499389
Q gi|254780717|r 164 EEEFKNQLSQLDKELHSILQ-PVEKKKIIVFHEAYRYFASHYNLSIVT---FPMSHSVFMGAASLRNIRSKIISDKISCL 239 (294)
Q Consensus 164 ~~~~~~~L~~l~~~~~~~~~-~~~~~~~i~~H~a~~Yf~~~~gl~~~~---~~~~~~~~~s~~~l~~~~~~ik~~~v~~i 239 (294)
+.++.++...+-..+++.+. ...++..+...+...|+.-.|+.-..+ +..++.. ++.++.. .+...+.+++
T Consensus 1 Y~el~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~~a~~~~G~v~vpl~~~~--~~~~l~~---~l~~s~~~~i 75 (123)
T 3c5e_A 1 FRELSENSQQAANVLSGACGLQRGDRVAVVLPRVPEWWLVILGCIRAGLIFMPGTIQM--KSTDILY---RLQMSKAKAI 75 (123)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCCTTCEEEEECCSCHHHHHHHHHHHHHTCEEEECCTTC--CHHHHHH---HHHHHTCSEE
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHCCEEEECCCCC--CHHHHHH---HHHHCCCCEE
T ss_conf 9999999999999988800979999999992896999999999998491999318779--9999999---9985146489
Q ss_pred EEECCCCHHHHHHHHHHHCC-C-EEEECCCCCCCCCCCCCHHHHHHH
Q ss_conf 98188897899999997199-0-899805336787781678999999
Q gi|254780717|r 240 FYGPEFDSKIIRSITNDTGV-M-SAILDPEGMLIAEGPELYFQLMRS 284 (294)
Q Consensus 240 f~e~~~~~~~~~~ia~e~~~-~-~~~ld~~~~~~~~~~~~Y~~~m~~ 284 (294)
|+++..-.+. +.+.++... + ++.++. ...++..+|.+++..
T Consensus 76 i~~~~~~~~~-~~~~~~~~~~~~~i~~~~---~~~~~~~~~~~~~~~ 118 (123)
T 3c5e_A 76 VAGDEVIQEV-DTVASECPSLRIKLLVSE---KSCDGWLNFKKLLNE 118 (123)
T ss_dssp EEETTTHHHH-HHHGGGCTTCCEEEEESS---SCCTTSEEHHHHHHH
T ss_pred EEECCCHHHH-CCCCCCCCCCCEEEECCC---CCCCCCCCCCCCCCC
T ss_conf 9501100000-000121334210100012---222222331002222
No 22
>>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthase, two rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} PDB: 2bis_A* (A:227-414)
Probab=58.84 E-value=13 Score=17.56 Aligned_cols=91 Identities=12% Similarity=0.106 Sum_probs=58.3
Q ss_pred HHH-HHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 245-6650257899967661035689997314557679975135446210012111233212247567765555678999
Q gi|254780717|r 65 SEA-MMLENADIIFWLGAEMESFLVKPLHSLNKQSNVVTLSHSPDLHRILLRDNHSHFHDSEADDLHLWLNPLNVQYIAH 143 (294)
Q Consensus 65 ~d~-~~l~~Adlii~~G~~~E~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~dpH~Wl~p~n~~~~a~ 143 (294)
.++ .-++.||+++.-. ..|++--.+++.+.-...+| +++..+...+... ..-+|.+|.+...+++
T Consensus 96 ~~~~~~~~~adi~i~~s-~~e~~~~~l~Ea~a~G~pvI-~s~~~~~~~~i~~------------~~g~~~~~~d~~~la~ 161 (188)
T 3fro_A 96 EFVRELYGSVDFVIIPS-YFEPFGLVALEAMCLGAIPI-ASAVGGLRDIITN------------ETGILVKAGDPGELAN 161 (188)
T ss_dssp HHHHHHHTTCSEEEECB-SCCSSCHHHHHHHHTTCEEE-EESSTHHHHHCCT------------TTCEEECTTCHHHHHH
T ss_pred HHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHHCCCCEE-EECCCCCHHHEEC------------CCEEEECCCCHHHHHH
T ss_conf 88999876203354445-45564379999998699899-9389981760788------------9589977999999999
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHH
Q ss_conf 999997421865658899899998631
Q gi|254780717|r 144 VIAMELIKKDPRNKIIYEKNEEEFKNQ 170 (294)
Q Consensus 144 ~I~~~L~~~dP~~~~~y~~N~~~~~~~ 170 (294)
.|.+.| +.+|+..+.+.+|+.++..+
T Consensus 162 ~i~~~l-~~~~~~~~~~~~~a~~~~~~ 187 (188)
T 3fro_A 162 AILKAL-ELSRSDLSKFRENCKKRAMS 187 (188)
T ss_dssp HHHHHH-HHTTTTTHHHHHHHHHHHHT
T ss_pred HHHHHH-HCCHHHHHHHHHHHHHHHHH
T ss_conf 999998-37999999999999999996
No 23
>>2zj3_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 1; glucosamine-6-phosphate synthase, aldose/ketose isomerase, rossmann-like fold; HET: G6P; 1.90A {Homo sapiens} PDB: 2zj4_A* 2v4m_A* (A:1-216)
Probab=56.49 E-value=14 Score=17.32 Aligned_cols=32 Identities=13% Similarity=-0.170 Sum_probs=21.0
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCCHHHHH
Q ss_conf 97889999999975499389981888978999
Q gi|254780717|r 220 GAASLRNIRSKIISDKISCLFYGPEFDSKIIR 251 (294)
Q Consensus 220 s~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~ 251 (294)
..+++....+..++.++++|..-...++...+
T Consensus 119 ~t~e~~~~~~~ak~~g~~~i~iT~~~~s~l~~ 150 (216)
T 2zj3_A 119 ETADTLMGLRYCKERGALTVGITNTVGSSISR 150 (216)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEESCTTCHHHH
T ss_pred CCHHHHHHHHHHHHCCCEEEEEECCCCCCCCC
T ss_conf 97789999999998799399997789986500
No 24
>>1m6j_A TIM, TPI, triosephosphate isomerase; asymmetry, monomer stability; 1.50A {Entamoeba histolytica} (A:)
Probab=55.66 E-value=14 Score=17.23 Aligned_cols=82 Identities=9% Similarity=0.143 Sum_probs=55.4
Q ss_pred CCCEEEECCCHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHC-----------CCCEEEEECCCCHHHHHHHH
Q ss_conf 2781462062157789874981200346775444978899999999754-----------99389981888978999999
Q gi|254780717|r 186 EKKKIIVFHEAYRYFASHYNLSIVTFPMSHSVFMGAASLRNIRSKIISD-----------KISCLFYGPEFDSKIIRSIT 254 (294)
Q Consensus 186 ~~~~~i~~H~a~~Yf~~~~gl~~~~~~~~~~~~~s~~~l~~~~~~ik~~-----------~v~~if~e~~~~~~~~~~ia 254 (294)
-..-++.|+|.| .+.++..+++.++.++.+.||+. +++. ++.-..++.....|.
T Consensus 166 ~~~~iIAYEPvw--------------AIGtg~~a~~~~i~~~~~~IR~~l~~~~~~~~~~~v~i-lYGGsV~~~n~~~l~ 230 (261)
T 1m6j_A 166 WKNIILAYEPVW--------------AIGTGKTATPDQAQEVHQYIRKWMTENISKEVAEATRI-QYGGSVNPANCNELA 230 (261)
T ss_dssp GGGEEEEECCGG--------------GSSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSCE-EECSCCCTTTHHHHH
T ss_pred HCCCEEEECCEE--------------EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCE-EECCCCCHHHHHHHH
T ss_conf 347457756566--------------21689999999999999999999987502545177738-853888987999985
Q ss_pred HHHCCCEEEECCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 97199089980533678778167899999999
Q gi|254780717|r 255 NDTGVMSAILDPEGMLIAEGPELYFQLMRSMS 286 (294)
Q Consensus 255 ~e~~~~~~~ld~~~~~~~~~~~~Y~~~m~~n~ 286 (294)
.+.++..+.+-.- ...++.|.++++...
T Consensus 231 ~~~~vDG~LvG~a----sl~~~~f~~ii~~~~ 258 (261)
T 1m6j_A 231 KKADIDGFLVGGA----SLDAAKFKTIINSVS 258 (261)
T ss_dssp TSTTCCEEEESGG----GGSHHHHHHHHGGGG
T ss_pred CCCCCCEEEEEHH----HCCHHHHHHHHHHHH
T ss_conf 6789884883056----568899999999998
No 25
>>2a3n_A Putative glucosamine-fructose-6-phosphate aminotransferase; 16423107, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.23A {Salmonella typhimurium LT2} (A:1-192)
Probab=54.08 E-value=15 Score=17.07 Aligned_cols=28 Identities=14% Similarity=-0.002 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCHH
Q ss_conf 7889999999975499389981888978
Q gi|254780717|r 221 AASLRNIRSKIISDKISCLFYGPEFDSK 248 (294)
Q Consensus 221 ~~~l~~~~~~ik~~~v~~if~e~~~~~~ 248 (294)
..++.+..+..|+.++++|......++.
T Consensus 115 s~~~~~~~~~ak~~g~~iI~IT~~~~s~ 142 (192)
T 2a3n_A 115 TKESVAIAEWCKAQGIRVVAITKNADSP 142 (192)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEESCTTSH
T ss_pred CHHHHHHHHHHHHHHHHHEEEEECCCCC
T ss_conf 7679999999986301211333024542
No 26
>>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} (A:)
Probab=53.90 E-value=15 Score=17.05 Aligned_cols=49 Identities=10% Similarity=0.167 Sum_probs=25.4
Q ss_pred HHHHHCCCCEE--CCC--CCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCH
Q ss_conf 78987498120--034--67754449788999999997549938998188897
Q gi|254780717|r 199 YFASHYNLSIV--TFP--MSHSVFMGAASLRNIRSKIISDKISCLFYGPEFDS 247 (294)
Q Consensus 199 Yf~~~~gl~~~--~~~--~~~~~~~s~~~l~~~~~~ik~~~v~~if~e~~~~~ 247 (294)
-+.++|+...+ +.. ......+..+.+.++.+.+++.++++.|++...++
T Consensus 45 ~li~~~~v~~iVvGlP~~~~g~~~~~~~~i~~f~~~l~~~~i~v~~~DEr~SS 97 (98)
T 1iv0_A 45 DFVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEALRARGVEVELWDERFTT 97 (98)
T ss_dssp HHHHHHTCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHTTCEEEEECCSCCC
T ss_pred HHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCC
T ss_conf 99987362507816897789991889999999999986479989998789888
No 27
>>1tre_A Triosephosphate isomerase; intramolecular oxidoreductase; 2.60A {Escherichia coli} (A:)
Probab=53.89 E-value=15 Score=17.05 Aligned_cols=86 Identities=7% Similarity=0.169 Sum_probs=59.4
Q ss_pred CCCCEEEECCCHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHH----------CCCCEEEEECCCCHHHHHHHH
Q ss_conf 0278146206215778987498120034677544497889999999975----------499389981888978999999
Q gi|254780717|r 185 VEKKKIIVFHEAYRYFASHYNLSIVTFPMSHSVFMGAASLRNIRSKIIS----------DKISCLFYGPEFDSKIIRSIT 254 (294)
Q Consensus 185 ~~~~~~i~~H~a~~Yf~~~~gl~~~~~~~~~~~~~s~~~l~~~~~~ik~----------~~v~~if~e~~~~~~~~~~ia 254 (294)
.-++.++.|+|.| .+.++..+++.++.++...||+ .+++. ++.-..++.....++
T Consensus 158 ~~~~~iIAYEPvw--------------aIGtg~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~v~i-lYGGsV~~~n~~~l~ 222 (255)
T 1tre_A 158 AFEGAVIAYEPVW--------------AIGTGKSATPAQAQAVHKFIRDHIAKVDANIAEQVII-QYGGSVNASNAAELF 222 (255)
T ss_dssp GGTTCEEEECCGG--------------GSSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEE-EECSCCCTTTHHHHH
T ss_pred HHCCCEEEECHHH--------------HCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCEEE-EECCCCCHHHHHHHH
T ss_conf 4246256642333--------------2055546675201346688888885123333386029-854877887999996
Q ss_pred HHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 97199089980533678778167899999999999
Q gi|254780717|r 255 NDTGVMSAILDPEGMLIAEGPELYFQLMRSMSNSI 289 (294)
Q Consensus 255 ~e~~~~~~~ld~~~~~~~~~~~~Y~~~m~~n~~~l 289 (294)
.+.++..+.+-.- ...++++.++++...+..
T Consensus 223 ~~~~iDG~LvG~a----sl~~~~f~~ii~~~~~~~ 253 (255)
T 1tre_A 223 AQPDIDGALVGGA----SLKADAFAVIVKAAEAAK 253 (255)
T ss_dssp TSTTCCEEEESGG----GGCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEECHH----HCCHHHHHHHHHHHHHHH
T ss_conf 6779987995356----568889999999999751
No 28
>>1mo0_A TIM, triosephosphate isomerase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; 1.70A {Caenorhabditis elegans} (A:)
Probab=53.85 E-value=15 Score=17.05 Aligned_cols=88 Identities=5% Similarity=0.154 Sum_probs=61.7
Q ss_pred CCCEEEECCCHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHC-----------CCCEEEEECCCCHHHHHHHH
Q ss_conf 2781462062157789874981200346775444978899999999754-----------99389981888978999999
Q gi|254780717|r 186 EKKKIIVFHEAYRYFASHYNLSIVTFPMSHSVFMGAASLRNIRSKIISD-----------KISCLFYGPEFDSKIIRSIT 254 (294)
Q Consensus 186 ~~~~~i~~H~a~~Yf~~~~gl~~~~~~~~~~~~~s~~~l~~~~~~ik~~-----------~v~~if~e~~~~~~~~~~ia 254 (294)
.++.++.|+|.| .+.++..+++.++.++.+.||+. +++.++. -..++.....++
T Consensus 176 ~~~~vIAYEPvW--------------AIGtg~~as~~~i~~v~~~IR~~l~~~~~~~~~~~v~IlYG-GSV~~~N~~~l~ 240 (275)
T 1mo0_A 176 WENIVIAYEPVW--------------AIGTGKTASGEQAQEVHEWIRAFLKEKVSPAVADATRIIYG-GSVTADNAAELG 240 (275)
T ss_dssp STTEEEEECCGG--------------GTTTSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSCEEEE-SSCCTTTHHHHT
T ss_pred CCCEEEEECCEE--------------ECCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHCCCCCEEEC-CCCCHHHHHHHH
T ss_conf 455178867654--------------03789999999999999999999998608766187648964-888987999985
Q ss_pred HHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf 971990899805336787781678999999999998741
Q gi|254780717|r 255 NDTGVMSAILDPEGMLIAEGPELYFQLMRSMSNSIAKNC 293 (294)
Q Consensus 255 ~e~~~~~~~ld~~~~~~~~~~~~Y~~~m~~n~~~l~k~l 293 (294)
.+.++..+.+-.-+. + ..|.++++.....++++|
T Consensus 241 ~~~~iDG~LVG~asl----~-~ef~~ii~~~~~~~~~~~ 274 (275)
T 1mo0_A 241 KKPDIDGFLVGGASL----K-PDFVKIINARSTALSCTC 274 (275)
T ss_dssp TSTTCCEEEESGGGG----S-THHHHHHHHHSCC-----
T ss_pred CCCCCCEEEEEHHHC----C-HHHHHHHHHHHHHHCCCC
T ss_conf 688988699403756----8-669999999999853325
No 29
>>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} (A:)
Probab=53.10 E-value=16 Score=16.97 Aligned_cols=44 Identities=14% Similarity=0.275 Sum_probs=35.1
Q ss_pred CHHHHHHHHHHHHHCCCCE-EEEECCCCHHHHHHHHHHHCCCEEEECC
Q ss_conf 9788999999997549938-9981888978999999971990899805
Q gi|254780717|r 220 GAASLRNIRSKIISDKISC-LFYGPEFDSKIIRSITNDTGVMSAILDP 266 (294)
Q Consensus 220 s~~~l~~~~~~ik~~~v~~-if~e~~~~~~~~~~ia~e~~~~~~~ld~ 266 (294)
....|..+++.+++.+|++ +|.+|. ...++ .++++|+..++|+.
T Consensus 112 ~~~~L~~~i~~l~~~gI~VSLFidP~--~~qi~-~A~~~GAd~VELhT 156 (243)
T 1m5w_A 112 QRDKMRDACKRLADAGIQVSLFIDAD--EEQIK-AAAEVGAPFIEIHT 156 (243)
T ss_dssp GHHHHHHHHHHHHHTTCEEEEEECSC--HHHHH-HHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHHHHHCCCEEEEEECCC--HHHHH-HHHHCCCCEEEECC
T ss_conf 38899999999986597079983688--89999-99970999575100
No 30
>>1yya_A Triosephosphate isomerase; riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.60A {Thermus thermophilus HB8} (A:)
Probab=52.72 E-value=16 Score=16.93 Aligned_cols=79 Identities=10% Similarity=0.191 Sum_probs=55.2
Q ss_pred CCEEEECCCHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHC-----------CCCEEEEECCCCHHHHHHHHH
Q ss_conf 781462062157789874981200346775444978899999999754-----------993899818889789999999
Q gi|254780717|r 187 KKKIIVFHEAYRYFASHYNLSIVTFPMSHSVFMGAASLRNIRSKIISD-----------KISCLFYGPEFDSKIIRSITN 255 (294)
Q Consensus 187 ~~~~i~~H~a~~Yf~~~~gl~~~~~~~~~~~~~s~~~l~~~~~~ik~~-----------~v~~if~e~~~~~~~~~~ia~ 255 (294)
++-++.|+|.| .+.++..+|+.++.++.+.||+. +++.++. -..++.....++.
T Consensus 159 ~~~iIAYEPvw--------------AIGtg~~as~~~i~~~~~~Ir~~l~~~~~~~~a~~i~IlYG-GSV~~~n~~~l~~ 223 (250)
T 1yya_A 159 EALVIAYEPVW--------------AIGTGKNATPEDAEAMHQAIRKALSERYGEAFASRVRILYG-GSVNPKNFADLLS 223 (250)
T ss_dssp GGCEEEECCGG--------------GSSSSCCCCHHHHHHHHHHHHHHHHHHHCHHHHTTCEEEEE-SSCCTTTHHHHHT
T ss_pred CCEEEEECCEE--------------ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEC-CCCCHHHHHHHHC
T ss_conf 45288734333--------------01578777706677778899999997612645377748972-7889879999847
Q ss_pred HHCCCEEEECCCCCCCCCCCCCHHHHHHH
Q ss_conf 71990899805336787781678999999
Q gi|254780717|r 256 DTGVMSAILDPEGMLIAEGPELYFQLMRS 284 (294)
Q Consensus 256 e~~~~~~~ld~~~~~~~~~~~~Y~~~m~~ 284 (294)
+.++..+.+-. ....++.|.++++.
T Consensus 224 ~~~iDG~LvG~----asl~~~~f~~ii~~ 248 (250)
T 1yya_A 224 MPNVDGGLVGG----ASLELESFLALLRI 248 (250)
T ss_dssp STTCCEEEESG----GGSSHHHHHHHHHH
T ss_pred CCCCCEEEECH----HHCCHHHHHHHHHH
T ss_conf 78988689425----65798999999996
No 31
>>2jgq_A Triosephosphate isomerase; glycolysis, pentose shunt, gluconeogenesis, lipid synthesis, fatty acid biosynthesis; HET: QGA; 2.3A {Helicobacter pylori} (A:)
Probab=51.71 E-value=17 Score=16.83 Aligned_cols=79 Identities=8% Similarity=0.118 Sum_probs=53.8
Q ss_pred CCCEEEECCCHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHC---CCCEEEEECCCCHHHHHHHHHHHCCCEE
Q ss_conf 2781462062157789874981200346775444978899999999754---9938998188897899999997199089
Q gi|254780717|r 186 EKKKIIVFHEAYRYFASHYNLSIVTFPMSHSVFMGAASLRNIRSKIISD---KISCLFYGPEFDSKIIRSITNDTGVMSA 262 (294)
Q Consensus 186 ~~~~~i~~H~a~~Yf~~~~gl~~~~~~~~~~~~~s~~~l~~~~~~ik~~---~v~~if~e~~~~~~~~~~ia~e~~~~~~ 262 (294)
....++.|+|.| .+.++..+|+.++.++.+.+++. ++++ ++.-..++.....++.+.++..+
T Consensus 150 ~~~~vIAYEP~w--------------aIGtg~~as~~~i~~~~~~ir~~~~~~~~i-lYGGsV~~~n~~~~~~~~~iDG~ 214 (233)
T 2jgq_A 150 YPNLVVAYEPIW--------------AIGTKKSASLEDIYLTHGFLKQILNQKTPL-LYGGSVNTQNAKEILGIDSVDGL 214 (233)
T ss_dssp CTTEEEEECCGG--------------GTTC--CCCHHHHHHHHHHHHHHSCTTSCE-EEESSCCTTTHHHHHTSTTCCEE
T ss_pred CHHHHHCCCCHH--------------HCCCCCCCCHHHHHHHHHHHHHHHCCCCEE-EEECCCCHHHHHHHHCCCCCCEE
T ss_conf 124552466222--------------035554431566666678777651567608-97076887699998578998869
Q ss_pred EECCCCCCCCCCCCCHHHHHH
Q ss_conf 980533678778167899999
Q gi|254780717|r 263 ILDPEGMLIAEGPELYFQLMR 283 (294)
Q Consensus 263 ~ld~~~~~~~~~~~~Y~~~m~ 283 (294)
.+-.- ...++.|.++++
T Consensus 215 LvG~a----sl~~~~f~~ii~ 231 (233)
T 2jgq_A 215 LIGSA----SWELENFKTIIS 231 (233)
T ss_dssp EESGG----GGSHHHHHHHHT
T ss_pred EECHH----HCCHHHHHHHHH
T ss_conf 96678----759889999996
No 32
>>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A* (A:175-354)
Probab=51.58 E-value=17 Score=16.82 Aligned_cols=39 Identities=15% Similarity=0.178 Sum_probs=26.4
Q ss_pred CHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEEEC
Q ss_conf 80245665025789996766103568999731455767997513
Q gi|254780717|r 63 RISEAMMLENADIIFWLGAEMESFLVKPLHSLNKQSNVVTLSHS 106 (294)
Q Consensus 63 tp~d~~~l~~Adlii~~G~~~E~~~~~~~~~~~~~~~~i~~~~~ 106 (294)
.+.-.+.+++||+++..|..+-.+. ....+.+++.+...
T Consensus 82 ~~~~~~~l~~aDlil~iG~~~~~~~-----~~~~~~~~i~i~~~ 120 (180)
T 3eya_A 82 FSSGFHTMMNADTLVLLGTQFPYRA-----FYPTDAKIIQIDIN 120 (180)
T ss_dssp CHHHHHHHHHCSEEEEESCCCCCGG-----GSCSSSEEEEEESC
T ss_pred CCHHHHEEECCCCEEEEEEECCCCC-----CCCCCCCEEEEECC
T ss_conf 3100110212442379864036545-----56776718999799
No 33
>>3g68_A Putative phosphosugar isomerase; YP_001089791.1, SIS domain, double-SIS domain protein, structural genomics; HET: MSE CIT; 1.80A {Clostridium difficile 630} (A:1-188)
Probab=51.33 E-value=17 Score=16.79 Aligned_cols=112 Identities=4% Similarity=-0.065 Sum_probs=54.8
Q ss_pred HHHHHHHCCCCEEEEEC-CCCCHHHHHHHHHCCC-CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 02456650257899967-6610356899973145-576799751354462100121112332122475677655556789
Q gi|254780717|r 64 ISEAMMLENADIIFWLG-AEMESFLVKPLHSLNK-QSNVVTLSHSPDLHRILLRDNHSHFHDSEADDLHLWLNPLNVQYI 141 (294)
Q Consensus 64 p~d~~~l~~Adlii~~G-~~~E~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~dpH~Wl~p~n~~~~ 141 (294)
......+.+-|++|... .|..+...+.++.+.. ..+++.++...+-+-....+..-.........+...-+-..+..+
T Consensus 74 ~~~~~~~~~~d~vI~iS~sG~t~e~~~~~~~ak~~g~~vi~iT~~~~s~l~~~ad~~l~~~~~~~~~~~~~~s~~~~~~l 153 (188)
T 3g68_A 74 EDTFKFDNENTLVVGVSQGGSSYSTYNAXKLAEDKGCKIASXAGCKNALIDEISDYILTVNCGEEKSGAKTKGYYCTKLN 153 (188)
T ss_dssp GGGGSSCCTTEEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESSTTCGGGGGCSEECCCCCCCCCCSSCSHHHHHHHHH
T ss_pred ECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 03321246886388760786858999999877653864223556666620100365311035665322343221047899
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999742186565889989999863122235899
Q gi|254780717|r 142 AHVIAMELIKKDPRNKIIYEKNEEEFKNQLSQLDKEL 178 (294)
Q Consensus 142 a~~I~~~L~~~dP~~~~~y~~N~~~~~~~L~~l~~~~ 178 (294)
+..+...+...+.+. +.++.+++.+.|+++...+
T Consensus 154 ~~~L~~~l~~~~~~~---~~~~~~~~~~~l~~l~~~~ 187 (188)
T 3g68_A 154 LXLLGLQIAREKGII---SSEKYNEEINKILDAINRF 187 (188)
T ss_dssp HHHHHHHHHHHTTSS---CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
T ss_conf 999999988752002---3678988876543217779
No 34
>>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} (A:228-444)
Probab=50.31 E-value=17 Score=16.79 Aligned_cols=92 Identities=9% Similarity=-0.007 Sum_probs=51.0
Q ss_pred HHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEEE-CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 566502578999676610356899973145576799751-3544621001211123321224756776555567899999
Q gi|254780717|r 67 AMMLENADIIFWLGAEMESFLVKPLHSLNKQSNVVTLSH-SPDLHRILLRDNHSHFHDSEADDLHLWLNPLNVQYIAHVI 145 (294)
Q Consensus 67 ~~~l~~Adlii~~G~~~E~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~dpH~Wl~p~n~~~~a~~I 145 (294)
...++.||+++.-. ..|++-..+++.+.-...+|.... +....... . ...-.++.+|.+...+++.|
T Consensus 119 ~~~~~~adv~v~ps-~~e~~~~~~~Eama~G~Pvi~~~~~~~~~~~~~-~----------~~~~g~~v~~~d~~~~a~~i 186 (217)
T 1uqt_A 119 MKIFRYSDVGLVTP-LRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAA-N----------ELTSALIVNPYDRDEVAAAL 186 (217)
T ss_dssp HHHHHHCSEEEECC-SSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGG-G----------TCTTSEEECTTCHHHHHHHH
T ss_pred HHHHCCCEEEEECC-CCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCH-H----------HHCCEEEECCCCHHHHHHHH
T ss_conf 42100025999687-534678189999980898889618984797847-8----------84880898979999999999
Q ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 99974218656588998999986312
Q gi|254780717|r 146 AMELIKKDPRNKIIYEKNEEEFKNQL 171 (294)
Q Consensus 146 ~~~L~~~dP~~~~~y~~N~~~~~~~L 171 (294)
.+.|. .+++......+|+.++.++.
T Consensus 187 ~~~l~-~~~~~~~~~~~~~~~~~~~~ 211 (217)
T 1uqt_A 187 DRALT-MSLAERISRHAEMLDVIVKN 211 (217)
T ss_dssp HHHHT-CCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHC-CCHHHHHHHHHHHHHHHHHC
T ss_conf 99983-99999999999999999977
No 35
>>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Flavobacterium heparinium} (A:1-474)
Probab=49.97 E-value=6.9 Score=19.26 Aligned_cols=39 Identities=15% Similarity=0.128 Sum_probs=22.1
Q ss_pred CHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHH
Q ss_conf 91589999999999600132388059997228999999970
Q gi|254780717|r 1 MKNFLIILIFLFFILSSVARAGSLQVVVSIKPIHSIVSCIM 41 (294)
Q Consensus 1 Mkk~l~~~~~~~~~l~~~~~~~~~~Vv~s~~pl~~lv~~I~ 41 (294)
|||++++++++++.++..+....- -....|+..|-+.|-
T Consensus 1 Mk~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~~tiq~Ai~ 39 (474)
T 1dbg_A 1 MKMLNKLAGYLLPIMVLLNVAPCL--GQVVASNETLYQVVK 39 (474)
T ss_dssp ---------------------------CEECSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHC--EEECCCHHHHHHHHH
T ss_conf 906999999999999986012010--055088389999997
No 36
>>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide formyl transferase; purine ribonucleotide biosynthesis, PURT; HET: ADP; 1.70A {Pyrococcus horikoshii OT3} PDB: 2czg_A* (A:1-108)
Probab=48.88 E-value=18 Score=16.55 Aligned_cols=63 Identities=10% Similarity=0.039 Sum_probs=43.6
Q ss_pred HHHHHHCCCCEECCCCCCCC----------CCCHHHHHHHHHHHHHCCCCEEEEECCC-CHHHHHHHHHHHCCCE
Q ss_conf 77898749812003467754----------4497889999999975499389981888-9789999999719908
Q gi|254780717|r 198 RYFASHYNLSIVTFPMSHSV----------FMGAASLRNIRSKIISDKISCLFYGPEF-DSKIIRSITNDTGVMS 261 (294)
Q Consensus 198 ~Yf~~~~gl~~~~~~~~~~~----------~~s~~~l~~~~~~ik~~~v~~if~e~~~-~~~~~~~ia~e~~~~~ 261 (294)
..-+++.|++++.+..+++. ..+..+...+.+..++.++.+|..|..+ +...++.+ ++.|+++
T Consensus 35 ~~aa~~lG~~~~~~d~~~~~pa~~~ad~~~~~~~~D~~~i~~~a~~~~~D~I~~e~e~i~~~~~~~~-e~~Gi~v 108 (108)
T 2dwc_A 35 AIEAQRLGVEVVAVDRYANAPAMQVAHRSYVGNMMDKDFLWSVVEREKPDAIIPEIEAINLDALFEF-EKDGYFV 108 (108)
T ss_dssp HHHHHHTTCEEEEEESSTTCHHHHHSSEEEESCTTCHHHHHHHHHHHCCSEEEECSSCSCHHHHHHH-HHTTCCB
T ss_pred HHHHHHCCCEEEEEECCCCCCHHHHCCEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHH-HHHCCCC
T ss_conf 9999987998999979898857774565897899999999999987399999968887578999999-8616624
No 37
>>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} (A:199-372)
Probab=48.70 E-value=18 Score=16.53 Aligned_cols=85 Identities=9% Similarity=0.155 Sum_probs=44.7
Q ss_pred CCCCEEEEEE------CHHHHHHHHHHHCCCCEEEEEECC----CCCCCCCC-----CCHHHHHHHCCCCEEEEECCCCC
Q ss_conf 2388059997------228999999970794417887058----99835335-----68024566502578999676610
Q gi|254780717|r 20 RAGSLQVVVS------IKPIHSIVSCIMQGIGTPALLVKG----ASSPHEYS-----LRISEAMMLENADIIFWLGAEME 84 (294)
Q Consensus 20 ~~~~~~Vv~s------~~pl~~lv~~I~gd~~~V~~L~~~----g~dpH~y~-----~tp~d~~~l~~Adlii~~G~~~E 84 (294)
.++++-|++- -.-+..|++.++-.. +++.... ..+|+..- -++.-...+.+||+|+..|..+-
T Consensus 15 ~AkrPvii~G~g~~~a~~~l~~lae~~~~pv--~~t~~~kg~~~~~hp~~~G~~g~~~~~~~~~~l~~aDlil~iG~~~~ 92 (174)
T 1ybh_A 15 ESKKPVLYVGGGCLNSSDELGRFVELTGIPV--ASTLMGLGSYPXDDELSLHMLGMHGTVYANYAVEHSDLLLAFGVRFD 92 (174)
T ss_dssp HCSSEEEEECGGGTTCHHHHHHHHHHHCCCE--EECTTTTTSSCTTSTTEEEECSTTSCHHHHHHHHHCSEEEEESCCCC
T ss_pred CCCCCEEEECCCCCCHHHHHHHHHHHHCCCE--EECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCC
T ss_conf 0799199989862451999999999869899--98742476668400132002577687999865212899999698652
Q ss_pred HHHHHHHHHCCCCCCEEEEEEC
Q ss_conf 3568999731455767997513
Q gi|254780717|r 85 SFLVKPLHSLNKQSNVVTLSHS 106 (294)
Q Consensus 85 ~~~~~~~~~~~~~~~~i~~~~~ 106 (294)
.+............++|.+...
T Consensus 93 ~~~~~~~~~~~~~~~~I~i~~d 114 (174)
T 1ybh_A 93 DRVTGKLEAFASRAKIVHIDID 114 (174)
T ss_dssp HHHHSSGGGTTTTSEEEEEESC
T ss_pred CCCCCCCCCCCCCCEEEEEECC
T ss_conf 0134532234678718999548
No 38
>>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, termination module, phosphopantetheine; 2.6A {Bacillus subtilis} (A:492-598)
Probab=46.67 E-value=20 Score=16.34 Aligned_cols=96 Identities=6% Similarity=0.103 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHCCCCEECCC-CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 998631222358999850300278146206215778987498120034-6775444978899999999754993899818
Q gi|254780717|r 165 EEFKNQLSQLDKELHSILQPVEKKKIIVFHEAYRYFASHYNLSIVTFP-MSHSVFMGAASLRNIRSKIISDKISCLFYGP 243 (294)
Q Consensus 165 ~~~~~~L~~l~~~~~~~~~~~~~~~~i~~H~a~~Yf~~~~gl~~~~~~-~~~~~~~s~~~l~~~~~~ik~~~v~~if~e~ 243 (294)
.++..+...+...+++.--...++..+..++...|+.-.|+.-..+.. .--....++.++..+ ++..+.++||+++
T Consensus 2 ~el~~~~~~~a~~L~~~gi~~g~~V~i~~~n~~~~~~~~~a~~~~G~~~vpl~~~~~~~~l~~~---~~~~~~~~i~~~~ 78 (107)
T 2vsq_A 2 RELDEEANRIARRLQKHGAGKGSVVALYTKRSLELVIGILGVLKAGAAYLPVDPKLPEDRISYM---LADSAAACLLTHQ 78 (107)
T ss_dssp HHHHHHHHHHHHHHHHTTCCTTCEEEECCCSSHHHHHHHHHHHHTTCEEEECCTTSCHHHHHHH---HHHHTCCEEEECS
T ss_pred HHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHH---HHHCCCCEEECCH
T ss_conf 7747998866400001487653389996235267999999762268020246877668999999---9844776364135
Q ss_pred CCCHHHHHHHHHHHCCCEEEECC
Q ss_conf 88978999999971990899805
Q gi|254780717|r 244 EFDSKIIRSITNDTGVMSAILDP 266 (294)
Q Consensus 244 ~~~~~~~~~ia~e~~~~~~~ld~ 266 (294)
.+-.+..+ +. ...+++.++.
T Consensus 79 ~~~~~~~~-~~--~~~~~i~~~~ 98 (107)
T 2vsq_A 79 EMKEQAAE-LP--YTGTTLFIDD 98 (107)
T ss_dssp TTCTTSTT-CC--CCSEEEESSC
T ss_pred HHHHCCCC-CC--CCCCCEECCC
T ss_conf 55311234-65--5564200121
No 39
>>2eq5_A 228AA long hypothetical hydantoin racemase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.20A {Pyrococcus horikoshii OT3} (A:104-204)
Probab=45.24 E-value=13 Score=17.56 Aligned_cols=76 Identities=9% Similarity=0.108 Sum_probs=50.6
Q ss_pred CCEEEECCC----HHHHHHHHCCCCEECC---CCC-CC-CCCCHHHHHHHHHHHHHCCCCEEEEEC-CCC-HHHHHHHHH
Q ss_conf 781462062----1577898749812003---467-75-444978899999999754993899818-889-789999999
Q gi|254780717|r 187 KKKIIVFHE----AYRYFASHYNLSIVTF---PMS-HS-VFMGAASLRNIRSKIISDKISCLFYGP-EFD-SKIIRSITN 255 (294)
Q Consensus 187 ~~~~i~~H~----a~~Yf~~~~gl~~~~~---~~~-~~-~~~s~~~l~~~~~~ik~~~v~~if~e~-~~~-~~~~~~ia~ 255 (294)
+-.+++|-+ .+.=|.+++|+++... ... +. ...++.++.+..+.+.+.+..+||.-- ++. -..++.|.+
T Consensus 14 ri~V~py~~~~~~~~~~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~adai~l~Ct~l~~~~~~~~Le~ 93 (101)
T 2eq5_A 14 RVGVLNLTEETPKVIRSILGNNLIAEDHPSGVSNTLDLLTDWGRREVINAAKRLKEKGVEVIALGCTGMSTIGIAPVLEE 93 (101)
T ss_dssp SEEEECSSSCCCHHHHHHHGGGEEEEECCTTCCSGGGGGSHHHHHHHHHHHHHHHHTTCSEEEECCTHHHHHTCHHHHHH
T ss_pred CEEEEECHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHH
T ss_conf 63566504626999999998740101344022100124578899999999999986699889980687202555898843
Q ss_pred HHCCCEE
Q ss_conf 7199089
Q gi|254780717|r 256 DTGVMSA 262 (294)
Q Consensus 256 e~~~~~~ 262 (294)
++|+|++
T Consensus 94 ~lgvPVi 100 (101)
T 2eq5_A 94 EVGIPVI 100 (101)
T ss_dssp HHSSCEE
T ss_pred CCCCEEE
T ss_conf 5898698
No 40
>>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, structural genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis V583} (A:1-74,A:185-264)
Probab=43.58 E-value=9.5 Score=18.37 Aligned_cols=69 Identities=13% Similarity=0.143 Sum_probs=40.8
Q ss_pred CHHHHHHHHCCCCEEC-CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEC
Q ss_conf 2157789874981200-3467754449788999999997549938998188897899999997199089980
Q gi|254780717|r 195 EAYRYFASHYNLSIVT-FPMSHSVFMGAASLRNIRSKIISDKISCLFYGPEFDSKIIRSITNDTGVMSAILD 265 (294)
Q Consensus 195 ~a~~Yf~~~~gl~~~~-~~~~~~~~~s~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~~~~~ld 265 (294)
....-+++++|+.... .....-..|.|+-+..+.+.+.-..-.|+++......... -++..|++.+-+.
T Consensus 49 ~~~~~~~~~l~~~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~~~vgdd~~~Di~--~A~~~G~~ti~v~ 118 (154)
T 1yv9_A 49 KSPETVAQRLANEFDIHVPASLVYTAKAIIMERAIAHLGVEKEQVIMVGDNYETDIQ--SGIQNGIDSLLVT 118 (154)
T ss_dssp SCHHHHHHHHHHHSCCCCCGGGEEEHSHHHHHHHHHHHCSCGGGEEEEESCTTTHHH--HHHHHTCEEEEET
T ss_pred CCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHH--HHHHCCCCEEEEC
T ss_conf 987999999987507553312047781677878899848984549998996278999--9998799899989
No 41
>>3l6u_A ABC-type sugar transport system periplasmic component; structural genomics, nysgrc, target 11006S, PSI-2, protein structure initiative; 1.90A {Exiguobacterium sibiricum} (A:1-111,A:250-293)
Probab=42.47 E-value=23 Score=15.93 Aligned_cols=68 Identities=15% Similarity=0.130 Sum_probs=45.6
Q ss_pred CHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCH---HHHHHHHHHHCCCEEEECCC
Q ss_conf 21577898749812003467754449788999999997549938998188897---89999999719908998053
Q gi|254780717|r 195 EAYRYFASHYNLSIVTFPMSHSVFMGAASLRNIRSKIISDKISCLFYGPEFDS---KIIRSITNDTGVMSAILDPE 267 (294)
Q Consensus 195 ~a~~Yf~~~~gl~~~~~~~~~~~~~s~~~l~~~~~~ik~~~v~~if~e~~~~~---~~~~~ia~e~~~~~~~ld~~ 267 (294)
.++...++++|..+... ..+.++.+..+.++.+.+.++..++.-+..+. ..++.+ ++.|+|++.+|..
T Consensus 28 ~gi~~~a~~~Gy~lii~----~~~~d~~~q~~~i~~li~~~vdGiII~p~~~~~~~~~l~~L-~~~gIPvV~id~~ 98 (155)
T 3l6u_A 28 NAFKAEAKANKYEALVA----TSQNSRISEREQILEFVHLKVDAIFITTLDDVYIGSAIEEA-KKAGIPVFAIDRX 98 (155)
T ss_dssp HHHHHHHHHTTCEEEEE----ECSSCHHHHHHHHHHHHHTTCSEEEEECSCTTTTHHHHHHH-HHTTCCEEEESSC
T ss_pred HHHHHHHHHCCCEEEEE----ECCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHH-HHCCCEEEEECCC
T ss_conf 99999999879989999----79999899999999999769989997156630159999999-9769929998877
No 42
>>3fxa_A SIS domain protein; YP_013136.1, putative sugar-phosphate isomerase, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Listeria monocytogenes str} (A:)
Probab=42.36 E-value=21 Score=16.20 Aligned_cols=31 Identities=16% Similarity=0.045 Sum_probs=22.2
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCCHHHH
Q ss_conf 9788999999997549938998188897899
Q gi|254780717|r 220 GAASLRNIRSKIISDKISCLFYGPEFDSKII 250 (294)
Q Consensus 220 s~~~l~~~~~~ik~~~v~~if~e~~~~~~~~ 250 (294)
..+++.+..+.+|+.++++|......++...
T Consensus 104 ~t~~~~~~~~~ak~~g~~vI~IT~~~~s~l~ 134 (201)
T 3fxa_A 104 NTGELLNLIPACKTKGSTLIGVTENPDSVIA 134 (201)
T ss_dssp CCHHHHTTHHHHHHHTCEEEEEESCTTSHHH
T ss_pred CCHHHHHHHHHHHHCCCCEEEEECCCCCCCC
T ss_conf 8268999999999839918998369999642
No 43
>>3egl_A DEGV family protein; alpha-beta-alpha sandwich, methylated lysines, structural genomics, PSI-2; HET: MLY MSE PLM; 2.41A {Corynebacterium glutamicum atcc 13032} (A:1-136)
Probab=41.52 E-value=24 Score=15.84 Aligned_cols=83 Identities=10% Similarity=0.131 Sum_probs=51.8
Q ss_pred CCCEEEECCCHHH----HHHHHCCCCEECCCC--C----CCCCCCHHHHHHHHHHHHHCCC----CEEEEECCCCH--HH
Q ss_conf 2781462062157----789874981200346--7----7544497889999999975499----38998188897--89
Q gi|254780717|r 186 EKKKIIVFHEAYR----YFASHYNLSIVTFPM--S----HSVFMGAASLRNIRSKIISDKI----SCLFYGPEFDS--KI 249 (294)
Q Consensus 186 ~~~~~i~~H~a~~----Yf~~~~gl~~~~~~~--~----~~~~~s~~~l~~~~~~ik~~~v----~~if~e~~~~~--~~ 249 (294)
++..+++ |+.. =+.+++|+.++++.. . ....|++.++.++.+.+.+.+. -|+...+..+. +.
T Consensus 4 ~ki~Iit--DS~~dl~~~~~~~~~i~viPl~i~~~~~~ykTS~ps~~~~~~~~~~l~~~g~yd~Ii~i~iSs~lSgt~~~ 81 (136)
T 3egl_A 4 XPVRVIV--DSSACLPTHVAEDLDITVINLHVXNNGEERSTSGLSSLELAASYARQLERGGDDGVLALHISXELSSTWSA 81 (136)
T ss_dssp CCCEEEE--EGGGCCCHHHHHHTTEEEECCEEEECSSCEEEECCCHHHHHHHHHHHHHHTTTSCEEEECSCTTTCSHHHH
T ss_pred CCEEEEE--ECCCCCCHHHHHHCCCEEEEEEEEECCEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHH
T ss_conf 8879999--78889999999878968997999999998555799979999999999984799729999757662468999
Q ss_pred HHHHHHHH-CCCEEEECCCCCC
Q ss_conf 99999971-9908998053367
Q gi|254780717|r 250 IRSITNDT-GVMSAILDPEGML 270 (294)
Q Consensus 250 ~~~ia~e~-~~~~~~ld~~~~~ 270 (294)
+...+++. +.++.++|+....
T Consensus 82 a~~a~~~~~~~~i~ViDs~~~s 103 (136)
T 3egl_A 82 AVTAAAVFDDDSVRVVDTSSLG 103 (136)
T ss_dssp HHHHHTTSSTTSEEEECCSCCT
T ss_pred HHHHHHHCCCCCEEEEECCCCH
T ss_conf 9999975799809999178503
No 44
>>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A* (A:202-364)
Probab=41.31 E-value=24 Score=15.82 Aligned_cols=42 Identities=21% Similarity=0.324 Sum_probs=24.2
Q ss_pred HHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEEE
Q ss_conf 024566502578999676610356899973145576799751
Q gi|254780717|r 64 ISEAMMLENADIIFWLGAEMESFLVKPLHSLNKQSNVVTLSH 105 (294)
Q Consensus 64 p~d~~~l~~Adlii~~G~~~E~~~~~~~~~~~~~~~~i~~~~ 105 (294)
+.-...+.+||++|..|..+-...........++.++|.+..
T Consensus 86 ~~~~~~~~~aDlii~iG~~~~~~~~~~~~~~~~~~~~I~i~~ 127 (163)
T 2vbf_A 86 ISLKNFVESADFILMLGVKLTDSSTGAFTHHLDENKMISLNI 127 (163)
T ss_dssp HHHHHHHHHCSEEEEESCCCCGGGTTTTCCCCCGGGEEEECS
T ss_pred CHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 124433036651047620013332111233233322334577
No 45
>>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiamine diphosphate; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A* (A:192-368)
Probab=40.27 E-value=25 Score=15.71 Aligned_cols=136 Identities=13% Similarity=0.187 Sum_probs=64.7
Q ss_pred CCCCCEEEEEEC--------HHHHHHHHHHHCCCCEEEEEECCCC--CCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHH
Q ss_conf 323880599972--------2899999997079441788705899--835335680245665025789996766103568
Q gi|254780717|r 19 ARAGSLQVVVSI--------KPIHSIVSCIMQGIGTPALLVKGAS--SPHEYSLRISEAMMLENADIIFWLGAEMESFLV 88 (294)
Q Consensus 19 ~~~~~~~Vv~s~--------~pl~~lv~~I~gd~~~V~~L~~~g~--dpH~y~~tp~d~~~l~~Adlii~~G~~~E~~~~ 88 (294)
..+.++-|++-- ..+..+++..+-.. +.+....|. +-|-+...+.--..+.+||+||..|..+-.+-.
T Consensus 18 ~~A~rPvii~G~~~~~~~a~~~l~~lae~~g~Pv--~~~~~~k~~~~~~~p~~~g~~~~~~l~~aDlii~iG~~~~~~~~ 95 (177)
T 2q28_A 18 AKAERPLIILGKGAAYSQADEQLREFIESAQIPF--LPMSMAKGILEDTHPLSAAAARSFALANADVVMLVGARLNWLLA 95 (177)
T ss_dssp HHCSSEEEEECHHHHHHTCHHHHHHHHHHHTCCE--EECGGGTTSSCTTCTTBCGGGHHHHHHHCSEEEEESCCCSGGGG
T ss_pred HCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCC--CCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 5336987999535333257999999975325875--22111134566668643354402120320002222343222234
Q ss_pred HHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf 99973145576799751354462100121112332122475677655556789999999974218656588998999986
Q gi|254780717|r 89 KPLHSLNKQSNVVTLSHSPDLHRILLRDNHSHFHDSEADDLHLWLNPLNVQYIAHVIAMELIKKDPRNKIIYEKNEEEFK 168 (294)
Q Consensus 89 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~dpH~Wl~p~n~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~ 168 (294)
..........++|.+....... ..+...+-.+.-| ....+..+.+.|....+.....+.+...+..
T Consensus 96 ~~~~~~~~~~~vi~i~~d~~~~-----------~~~~~~~~~i~~d---~~~~l~~L~~~l~~~~~~~~~~~~~~~~~~~ 161 (177)
T 2q28_A 96 HGKKGWAADTQFIQLDIEPQEI-----------DSNRPIAVPVVGD---IASSMQGMLAELKQNTFTTPLVWRDILNIHK 161 (177)
T ss_dssp GGTTTSCTTCEEEEEESCGGGT-----------TSSSCCSEEEESC---HHHHHHHHHHHHHHSCCCCCHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCC-----------CCCCCCEEEEEHH---HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_conf 3212368654433456675322-----------2345512324200---3689999999755245664034445688876
Q ss_pred HH
Q ss_conf 31
Q gi|254780717|r 169 NQ 170 (294)
Q Consensus 169 ~~ 170 (294)
++
T Consensus 162 ~~ 163 (177)
T 2q28_A 162 QQ 163 (177)
T ss_dssp HH
T ss_pred HH
T ss_conf 53
No 46
>>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, thiamin thiazolone diphosphate, inhibitor; HET: TZD; 1.00A {Pseudomonas putida} (A:174-341)
Probab=40.26 E-value=25 Score=15.71 Aligned_cols=24 Identities=21% Similarity=0.411 Sum_probs=18.6
Q ss_pred CHHHHHHHCCCCEEEEECCCCCHH
Q ss_conf 802456650257899967661035
Q gi|254780717|r 63 RISEAMMLENADIIFWLGAEMESF 86 (294)
Q Consensus 63 tp~d~~~l~~Adlii~~G~~~E~~ 86 (294)
++.-...+.+||+++..|..+..+
T Consensus 84 ~~~~~~~~~~aDlil~vG~~~~~~ 107 (168)
T 1q6z_A 84 IAAISQLLEGHDVVLVIGAPVFRY 107 (168)
T ss_dssp HHHHHHHHTTCSEEEEESSCTTCC
T ss_pred CHHHHHHHHCCCCEEEECCCCCCC
T ss_conf 489999985466202324533332
No 47
>>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} (A:181-349)
Probab=39.91 E-value=25 Score=15.68 Aligned_cols=83 Identities=12% Similarity=0.140 Sum_probs=43.0
Q ss_pred CCCCCEEEEEECH--------HHHHHHHHHHCCCCEEEE-EECC----CCCCCCCCC------CHHHHHHHCCCCEEEEE
Q ss_conf 3238805999722--------899999997079441788-7058----998353356------80245665025789996
Q gi|254780717|r 19 ARAGSLQVVVSIK--------PIHSIVSCIMQGIGTPAL-LVKG----ASSPHEYSL------RISEAMMLENADIIFWL 79 (294)
Q Consensus 19 ~~~~~~~Vv~s~~--------pl~~lv~~I~gd~~~V~~-L~~~----g~dpH~y~~------tp~d~~~l~~Adlii~~ 79 (294)
.++.++-|++--. .+..+++..+- .|.+ .... ..+|+.+-. ++.-.+.+.+||+++..
T Consensus 27 ~~AkrPvii~G~~~~~~~~~~~l~~lae~~g~---pv~~t~~~kg~~~~~~p~~~G~~~~~~~~~~~~~~l~~aDlvl~~ 103 (169)
T 1ovm_A 27 AMSKRTALLADFLVLRHGLKHALQKWVKEVPM---AHATMLMGKGIFDERQAGFYGTYSGSASTGAVKEAIEGADTVLCV 103 (169)
T ss_dssp HTCSCEEEEECHHHHHTTCHHHHHHHHHHSCC---EEEECGGGTTSSCTTSTTCCCCCCGGGSCHHHHHHHHTSSEEEEE
T ss_pred HHCCCCEEEECCCCCCCCCHHHHHHHHHHCCC---CEEECCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEC
T ss_conf 85588689957621235336999999986699---612223331412666653467624655659999998414401110
Q ss_pred CCCCCHHHHHHHHHCCCCCCEEEEE
Q ss_conf 7661035689997314557679975
Q gi|254780717|r 80 GAEMESFLVKPLHSLNKQSNVVTLS 104 (294)
Q Consensus 80 G~~~E~~~~~~~~~~~~~~~~i~~~ 104 (294)
|..+-.+.........+..++|.+.
T Consensus 104 G~~~~~~~~~~~~~~~~~~~~I~i~ 128 (169)
T 1ovm_A 104 GTRFTDTLTAGFTHQLTPAQTIEVQ 128 (169)
T ss_dssp SCCCCTTTTTTTCCCCCTTTEEEEC
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEEC
T ss_conf 4345644445654457874046745
No 48
>>3gvg_A Triosephosphate isomerase; cytoplasm, gluconeogenesis, glycolysis, pentose shunt, structural genomics; 1.55A {Mycobacterium tuberculosis} (A:)
Probab=39.78 E-value=25 Score=15.67 Aligned_cols=82 Identities=13% Similarity=0.223 Sum_probs=56.6
Q ss_pred CCEEEECCCHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHH-----------CCCCEEEEECCCCHHHHHHHHH
Q ss_conf 78146206215778987498120034677544497889999999975-----------4993899818889789999999
Q gi|254780717|r 187 KKKIIVFHEAYRYFASHYNLSIVTFPMSHSVFMGAASLRNIRSKIIS-----------DKISCLFYGPEFDSKIIRSITN 255 (294)
Q Consensus 187 ~~~~i~~H~a~~Yf~~~~gl~~~~~~~~~~~~~s~~~l~~~~~~ik~-----------~~v~~if~e~~~~~~~~~~ia~ 255 (294)
++.++.|+|.| .+.++..+|+.++.++.+.||+ .++++++. -..++.....++.
T Consensus 187 ~~iiIAYEPvW--------------AIGtg~~as~e~i~~v~~~IR~~l~~~~~~~~~~~v~IlYG-GSV~~~N~~~l~~ 251 (283)
T 3gvg_A 187 GSVVIAYEPVW--------------AIGTGRVASAADAQEVCAAIRKELASLASPRIADTVRVLYG-GSVNAKNVGDIVA 251 (283)
T ss_dssp TTCEEEECCGG--------------GSSSSCCCCHHHHHHHHHHHHHHHHHHSCHHHHTTCCEEEC-SCCCTTTHHHHHT
T ss_pred CEEEEEECCEE--------------CCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEC-CCCCHHHHHHHHC
T ss_conf 32899953410--------------23666668768889999999999987517534277758850-8979879999956
Q ss_pred HHCCCEEEECCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 71990899805336787781678999999999
Q gi|254780717|r 256 DTGVMSAILDPEGMLIAEGPELYFQLMRSMSN 287 (294)
Q Consensus 256 e~~~~~~~ld~~~~~~~~~~~~Y~~~m~~n~~ 287 (294)
+.++..+.+-.- ...+++|.++++...+
T Consensus 252 ~~~iDG~LVG~a----sl~~~~f~~Ii~~~~~ 279 (283)
T 3gvg_A 252 QDDVDGGLVGGA----SLDGEHFATLAAIAAG 279 (283)
T ss_dssp STTCCEEEECGG----GGSHHHHHHHHHHHHC
T ss_pred CCCCCEEEECHH----HCCHHHHHHHHHHHCC
T ss_conf 789886883056----5798999999999708
No 49
>>2q02_A Putative cytoplasmic protein; NP_463296.1, structural genomics, joint center for structural genomics, JCSG; 2.40A {Salmonella typhimurium LT2} (A:)
Probab=38.79 E-value=26 Score=15.57 Aligned_cols=15 Identities=0% Similarity=-0.128 Sum_probs=7.8
Q ss_pred HHHHHHHHHHHCCCC
Q ss_conf 899999999754993
Q gi|254780717|r 223 SLRNIRSKIISDKIS 237 (294)
Q Consensus 223 ~l~~~~~~ik~~~v~ 237 (294)
++..+.+.+++.+..
T Consensus 225 d~~~i~~~L~~~g~~ 239 (272)
T 2q02_A 225 QNYQQVQRLENXGYR 239 (272)
T ss_dssp CHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHCCCC
T ss_conf 799999999980997
No 50
>>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate assisted catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* (A:223-410)
Probab=38.70 E-value=26 Score=15.56 Aligned_cols=92 Identities=18% Similarity=0.168 Sum_probs=54.1
Q ss_pred HHH-HHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 245-6650257899967661035689997314557679975135446210012111233212247567765555678999
Q gi|254780717|r 65 SEA-MMLENADIIFWLGAEMESFLVKPLHSLNKQSNVVTLSHSPDLHRILLRDNHSHFHDSEADDLHLWLNPLNVQYIAH 143 (294)
Q Consensus 65 ~d~-~~l~~Adlii~~G~~~E~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~dpH~Wl~p~n~~~~a~ 143 (294)
.++ .-++.+|+++..+ ..|++-..+++.+.-...++ .++..+......... .=+..++.+...+++
T Consensus 95 ~~~~~~~~~~d~~i~~s-~~e~~~~~~~Ea~a~g~Pvi-~~~~~~~~~~~~~~~-----------~g~~~~~~d~~~~a~ 161 (188)
T 3c48_A 95 SELVAVYRAADIVAVPS-FNESFGLVAMEAQASGTPVI-AARVGGLPIAVAEGE-----------TGLLVDGHSPHAWAD 161 (188)
T ss_dssp HHHHHHHHHCSEEEECC-SCCSSCHHHHHHHHTTCCEE-EESCTTHHHHSCBTT-----------TEEEESSCCHHHHHH
T ss_pred HHHHHHHHHHCCCCCCC-HHHHHHHHHHHHHHCCCEEE-EECCCCCHHHHCCCC-----------EEEEECCCCHHHHHH
T ss_conf 89999875204310133-34411356888863485199-958998077622796-----------599978999999999
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 9999974218656588998999986312
Q gi|254780717|r 144 VIAMELIKKDPRNKIIYEKNEEEFKNQL 171 (294)
Q Consensus 144 ~I~~~L~~~dP~~~~~y~~N~~~~~~~L 171 (294)
.|..-+ .+|+....+.+|+.++.++.
T Consensus 162 ~i~~l~--~~~~~~~~~~~~a~~~~~~y 187 (188)
T 3c48_A 162 ALATLL--DDDETRIRMGEDAVEHARTF 187 (188)
T ss_dssp HHHHHH--HCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH--CCHHHHHHHHHHHHHHHHHC
T ss_conf 999998--69999999999999999969
No 51
>>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} (A:91-179)
Probab=38.35 E-value=27 Score=15.53 Aligned_cols=71 Identities=11% Similarity=0.201 Sum_probs=47.2
Q ss_pred CCCCCEEEECCC----HHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCC
Q ss_conf 002781462062----1577898749812003467754449788999999997549938998188897899999997199
Q gi|254780717|r 184 PVEKKKIIVFHE----AYRYFASHYNLSIVTFPMSHSVFMGAASLRNIRSKIISDKISCLFYGPEFDSKIIRSITNDTGV 259 (294)
Q Consensus 184 ~~~~~~~i~~H~----a~~Yf~~~~gl~~~~~~~~~~~~~s~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~ 259 (294)
...++.-++.++ .+.-+++-++++...... -+..++...++.+++.+..+++.. ..+..+|++.|.
T Consensus 14 ~~~~kiaivgf~~~~~~~~~~~~ll~~~i~~~~~-----~~~~e~~~~i~~l~~~G~~vVIG~-----~~~~~~A~~~Gl 83 (89)
T 2pju_A 14 KLTSSIGVVTYQETIPALVAFQKTFNLRLDQRSY-----ITEEDARGQINELKANGTEAVVGA-----GLITDLAEEAGM 83 (89)
T ss_dssp CTTSCEEEEEESSCCHHHHHHHHHHTCCEEEEEE-----SSHHHHHHHHHHHHHTTCCEEEES-----HHHHHHHHHTTS
T ss_pred HHCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEE-----CCHHHHHHHHHHHHHCCCCEEECC-----HHHHHHHHHCCC
T ss_conf 7589789993775146999999995994499996-----588999999999998699799998-----699999998499
Q ss_pred CEEEE
Q ss_conf 08998
Q gi|254780717|r 260 MSAIL 264 (294)
Q Consensus 260 ~~~~l 264 (294)
+.+.+
T Consensus 84 ~~vlI 88 (89)
T 2pju_A 84 TGIFI 88 (89)
T ss_dssp EEEES
T ss_pred CEEEE
T ss_conf 78997
No 52
>>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} (A:194-372)
Probab=37.80 E-value=27 Score=15.47 Aligned_cols=142 Identities=9% Similarity=0.049 Sum_probs=64.1
Q ss_pred CCCCCEEEEEECH--------HHHHHHHHHHCCCCEEEEEECCCC--CCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHH
Q ss_conf 3238805999722--------899999997079441788705899--835335680245665025789996766103568
Q gi|254780717|r 19 ARAGSLQVVVSIK--------PIHSIVSCIMQGIGTPALLVKGAS--SPHEYSLRISEAMMLENADIIFWLGAEMESFLV 88 (294)
Q Consensus 19 ~~~~~~~Vv~s~~--------pl~~lv~~I~gd~~~V~~L~~~g~--dpH~y~~tp~d~~~l~~Adlii~~G~~~E~~~~ 88 (294)
..+.++-|++--. -+..|++..+-. -+.+....|. +-|-+-..+.-...+.+||+||..|..+..+..
T Consensus 18 ~~A~rPvIi~G~~~~~~~a~~~l~~lae~~giP--v~~~~~~kg~~p~~~p~~~g~~~~~~~~~aDlil~iG~~~~~~~~ 95 (179)
T 2c31_A 18 KNAKRPVIMLGKGAAYAQCDDEIRALVEETGIP--FLPMGMAKGLLPDNHPQSAAATRAFALAQCDVCVLIGARLNWLMQ 95 (179)
T ss_dssp HTCSSEEEEECHHHHHHTCHHHHHHHHHHHTCC--EEECGGGTTSSCTTCTTBCGGGHHHHHHHCSEEEEESCCCSGGGG
T ss_pred HHCCCCEEEEEECCCHHHHHHHHHHHHHHCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCEEEC
T ss_conf 616895899962311344789998878741865--122201245566434322100013222455121023665200011
Q ss_pred HH-H-HHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf 99-9-731455767997513544621001211123321224756776555567899999999742186565889989999
Q gi|254780717|r 89 KP-L-HSLNKQSNVVTLSHSPDLHRILLRDNHSHFHDSEADDLHLWLNPLNVQYIAHVIAMELIKKDPRNKIIYEKNEEE 166 (294)
Q Consensus 89 ~~-~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~dpH~Wl~p~n~~~~a~~I~~~L~~~dP~~~~~y~~N~~~ 166 (294)
.. . ....++.++|.+.....- ... .+.+-+.+- -.....+..+.+.|....+...+..+...+.
T Consensus 96 ~~~~~~~~~~~~~vi~id~d~~~----~~~---------~~~~d~~i~-~d~~~~l~~L~~~l~~~~~~~~~~~~~~~~~ 161 (179)
T 2c31_A 96 HGKGKTWGDELKKYVQIDIQANE----MDS---------NQPIAAPVV-GDIKSAVSLLRKALKGAPKADAEWTGALKAK 161 (179)
T ss_dssp GGCSGGGTTSCCEEEEEESCGGG----TTS---------SSCCSEEEE-SCHHHHHHHHHHHHTTCCCCCHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCEEEECCCCCC----CCC---------CCCCCCCCC-HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 56321001244303641135431----223---------454320000-2258899999987653201203331246787
Q ss_pred HHHHHHHHHH
Q ss_conf 8631222358
Q gi|254780717|r 167 FKNQLSQLDK 176 (294)
Q Consensus 167 ~~~~L~~l~~ 176 (294)
..+-...+..
T Consensus 162 ~~~~~~~~~~ 171 (179)
T 2c31_A 162 VDGNKAKLAG 171 (179)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
T ss_conf 7665543333
No 53
>>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} (A:1-37,A:111-243)
Probab=37.44 E-value=27 Score=15.44 Aligned_cols=67 Identities=12% Similarity=0.045 Sum_probs=39.8
Q ss_pred HHHHHHHHCCCCEE-----CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEC
Q ss_conf 15778987498120-----03467754449788999999997549938998188897899999997199089980
Q gi|254780717|r 196 AYRYFASHYNLSIV-----TFPMSHSVFMGAASLRNIRSKIISDKISCLFYGPEFDSKIIRSITNDTGVMSAILD 265 (294)
Q Consensus 196 a~~Yf~~~~gl~~~-----~~~~~~~~~~s~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~~~~~ld 265 (294)
....+.+.+|+.-. +-.......|.+.-+..+.+.+.-..-.|++++-.... + .-++..|++.+-+.
T Consensus 70 ~~~~~l~~lgl~~~fd~ii~~~d~~~~KP~~~~~~~al~~l~i~p~~~i~IGD~~~D--i-~aA~~aGi~~I~v~ 141 (170)
T 2hsz_A 70 HVQPILTAFGIDHLFSEXLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQND--I-FAAHSAGCAVVGLT 141 (170)
T ss_dssp HHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHH--H-HHHHHHTCEEEEES
T ss_pred HHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHH--H-HHHHHCCCEEEEEE
T ss_conf 999999876974002157545436766432112102455530111236222677767--9-99998499499990
No 54
>>3bzc_A TEX; helix-turn-helix, helix-hairpin-helix, S1 domain, YQGF domain, transcription, RNA binding protein; 2.27A {Pseudomonas aeruginosa} (A:326-467)
Probab=37.25 E-value=22 Score=16.08 Aligned_cols=47 Identities=6% Similarity=0.060 Sum_probs=32.8
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH-------HHHHCCCEEEECC
Q ss_conf 9788999999997549938998188897899999-------9971990899805
Q gi|254780717|r 220 GAASLRNIRSKIISDKISCLFYGPEFDSKIIRSI-------TNDTGVMSAILDP 266 (294)
Q Consensus 220 s~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~i-------a~e~~~~~~~ld~ 266 (294)
..+.+..+.+.++++++.+|.+..+...+..+.. .+..++++...|-
T Consensus 43 ~~~~~~~l~~li~~~~~~~iViG~g~~~~~~~~~~~~~~~l~~~~~i~V~~vDE 96 (142)
T 3bzc_A 43 WDQTLAVLAALCAKHQVELIAIGNGTASRETDKLAGELIKKYPGMKLTKIMVSE 96 (142)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEESSTTHHHHHHHHHHHHHHCGGGCCEEEEECC
T ss_pred HHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEECC
T ss_conf 999999999999981992899889813589999999999867678862899333
No 55
>>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} (A:187-356)
Probab=37.04 E-value=28 Score=15.39 Aligned_cols=86 Identities=13% Similarity=0.132 Sum_probs=46.9
Q ss_pred CCCCCEEEEEEC--------HHHHHHHHHHHCCCCEEEEEEC----CCCCCCCCCC----------CHHHHHHHCCCCEE
Q ss_conf 323880599972--------2899999997079441788705----8998353356----------80245665025789
Q gi|254780717|r 19 ARAGSLQVVVSI--------KPIHSIVSCIMQGIGTPALLVK----GASSPHEYSL----------RISEAMMLENADII 76 (294)
Q Consensus 19 ~~~~~~~Vv~s~--------~pl~~lv~~I~gd~~~V~~L~~----~g~dpH~y~~----------tp~d~~~l~~Adli 76 (294)
.++.++-|++-- ..+..+++..+-.. +++... +..+|+..-. ++.-.+.+.+||++
T Consensus 28 ~~A~rPvii~G~~~~~~~a~~~l~~lae~~~~pv--~~t~~~kg~~~~~~p~~~G~~~~~~~G~~~~~~~~~~l~~aDli 105 (170)
T 2iht_A 28 AEAKHPVLVVGAAAIRSGAVPAIRALAERLNIPV--ITTYIAKGVLPVGHELNYGAVTGYXDGILNFPALQTXFAPVDLV 105 (170)
T ss_dssp HHCSSEEEEECHHHHHTTCHHHHHHHHHHHTCCE--EECSTTTTSSCTTCTTEEEECCTTHHHHHTSCHHHHHHTTCCEE
T ss_pred HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCE--EEEECCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCE
T ss_conf 8564652013212234323799999999979898--97314665435785245544333011332247899873443430
Q ss_pred EEECCCCCHHHHHHHHHCCCCCCEEEEEEC
Q ss_conf 996766103568999731455767997513
Q gi|254780717|r 77 FWLGAEMESFLVKPLHSLNKQSNVVTLSHS 106 (294)
Q Consensus 77 i~~G~~~E~~~~~~~~~~~~~~~~i~~~~~ 106 (294)
+..|..+..+..-.........+++.+...
T Consensus 106 l~iG~~~~~~~~~~~~~~~~~~~~i~i~~d 135 (170)
T 2iht_A 106 LTVGYDYAEDLRPSXWQKGIEKKTVRISPT 135 (170)
T ss_dssp EEETCCGGGCCCHHHHCCSSCCEEEEEESS
T ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 000245312466542224553210001222
No 56
>>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii} (A:58-170)
Probab=34.88 E-value=30 Score=15.18 Aligned_cols=80 Identities=5% Similarity=-0.052 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHCCCCEECCCCCC-CCCCCHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 998631222358999850300278146206215778987498120034677-5444978899999999754993899818
Q gi|254780717|r 165 EEFKNQLSQLDKELHSILQPVEKKKIIVFHEAYRYFASHYNLSIVTFPMSH-SVFMGAASLRNIRSKIISDKISCLFYGP 243 (294)
Q Consensus 165 ~~~~~~L~~l~~~~~~~~~~~~~~~~i~~H~a~~Yf~~~~gl~~~~~~~~~-~~~~s~~~l~~~~~~ik~~~v~~if~e~ 243 (294)
.++.++...+...+++... ..++..+..++...++.-.|+.-..+....| ....++.++..++ +..+.++||++.
T Consensus 2 ~el~~~~~~ia~~L~~~g~-~gd~V~i~~~n~~~~~~~~~A~~~~G~~~vpi~~~~~~~~l~~~l---~~~~~~~ii~~~ 77 (113)
T 3ite_A 2 KKLNETANQVANLIIHASL-HGRAIAVSLDRSLIAFAIIVGIXKSGNTYVPIEAGLPNDRKSFLL---RDSRAAXAFVCD 77 (113)
T ss_dssp HHHHHHHHHHHHHHHHTTC-SSCEEEEECCSCHHHHHHHHHHHHTTCEEEECCTTSCHHHHHHHH---HHHTCSEEEECT
T ss_pred HHHHHHHHHHHHHHHHCCC-CCCEEEEEECCCHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHH---HHCCCCEEEEEC
T ss_conf 9999999999999997799-969899993898999999999999697999868889999999998---624887999960
Q ss_pred CCCHH
Q ss_conf 88978
Q gi|254780717|r 244 EFDSK 248 (294)
Q Consensus 244 ~~~~~ 248 (294)
.+.++
T Consensus 78 ~~~~~ 82 (113)
T 3ite_A 78 NNFDG 82 (113)
T ss_dssp TTTTT
T ss_pred HHHHH
T ss_conf 03221
No 57
>>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Bacillus brevis} (A:67-173)
Probab=34.17 E-value=31 Score=15.11 Aligned_cols=97 Identities=10% Similarity=0.040 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHCCCCEECCC-CCCCCCCCHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 9998631222358999850300278146206215778987498120034-677544497889999999975499389981
Q gi|254780717|r 164 EEEFKNQLSQLDKELHSILQPVEKKKIIVFHEAYRYFASHYNLSIVTFP-MSHSVFMGAASLRNIRSKIISDKISCLFYG 242 (294)
Q Consensus 164 ~~~~~~~L~~l~~~~~~~~~~~~~~~~i~~H~a~~Yf~~~~gl~~~~~~-~~~~~~~s~~~l~~~~~~ik~~~v~~if~e 242 (294)
+.++..+...+...+++.--...++..+...+...|+.-.+++-..+.. ..-....+..++..+ ++..+.+++|++
T Consensus 1 y~el~~~~~~la~~L~~~Gi~~g~~V~i~~~n~~~~~~~~~a~~~~G~~~v~i~~~~~~~~l~~~---l~~~~~~~ii~~ 77 (107)
T 1amu_A 1 YHELNVKANQLARIFIEKGIGKDTLVGIMMEKSIDLFIGILAVLKAGGAYVPIDIEYPKERIQYI---LDDSQARMLLTQ 77 (107)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEECCTTSCHHHHHHH---HHHHTCSEEEEC
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHH---HHHCCCCEEEEH
T ss_conf 99999999999999997496884999999389899999999999869699986898999999999---974487468611
Q ss_pred CCCCHHHHHHHHHHHCCCEEEECC
Q ss_conf 888978999999971990899805
Q gi|254780717|r 243 PEFDSKIIRSITNDTGVMSAILDP 266 (294)
Q Consensus 243 ~~~~~~~~~~ia~e~~~~~~~ld~ 266 (294)
..+-.+. +.+. ...++..++.
T Consensus 78 ~~~~~~~-~~~~--~~~~~~~i~~ 98 (107)
T 1amu_A 78 KHLVHLI-HNIQ--FNGQVEIFEE 98 (107)
T ss_dssp GGGHHHH-TTSC--CCSEEEECCC
T ss_pred HHHHHHH-HHHC--CCCCCCEEEC
T ss_conf 5566565-5311--3554200100
No 58
>>1nri_A Hypothetical protein HI0754; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.90A {Haemophilus influenzae} (A:1-233)
Probab=33.64 E-value=32 Score=15.05 Aligned_cols=63 Identities=11% Similarity=0.011 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCCCCEEEECCCHHHHHHHH
Q ss_conf 677655556789999999974218656588998999986312223589998503--00278146206215778987
Q gi|254780717|r 130 HLWLNPLNVQYIAHVIAMELIKKDPRNKIIYEKNEEEFKNQLSQLDKELHSILQ--PVEKKKIIVFHEAYRYFASH 203 (294)
Q Consensus 130 H~Wl~p~n~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~L~~l~~~~~~~~~--~~~~~~~i~~H~a~~Yf~~~ 203 (294)
+.+.++.+...+++.+.+... ...+.....+....+.+..... .-.++.++.....-.+.++.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~i~~a~~I~i~G~G~S~~~A~~ 88 (233)
T 1nri_A 24 SVDIDRQSTLEIVRLXNEEDK-----------LVPLAIESCLPQISLAVEQIVQAFQQGGRLIYIGAGTSGRLGVL 88 (233)
T ss_dssp GTTGGGSCHHHHHHHHHHHHT-----------HHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEESHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
T ss_conf 798100899999999998659-----------99999999899999999999999973997999817656999999
No 59
>>1aw2_A Triosephosphate isomerase; psychrophilic; 2.65A {Vibrio marinus} (A:)
Probab=33.50 E-value=32 Score=15.04 Aligned_cols=85 Identities=11% Similarity=0.213 Sum_probs=56.7
Q ss_pred CCCCEEEECCCHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHC----------CCCEEEEECCCCHHHHHHHH
Q ss_conf 02781462062157789874981200346775444978899999999754----------99389981888978999999
Q gi|254780717|r 185 VEKKKIIVFHEAYRYFASHYNLSIVTFPMSHSVFMGAASLRNIRSKIISD----------KISCLFYGPEFDSKIIRSIT 254 (294)
Q Consensus 185 ~~~~~~i~~H~a~~Yf~~~~gl~~~~~~~~~~~~~s~~~l~~~~~~ik~~----------~v~~if~e~~~~~~~~~~ia 254 (294)
.-.+.++.|+|.| ...++..+++.++.++...||+. +++ +++.-..++.....+.
T Consensus 160 ~~~~~iIAYEPvw--------------aIGtg~~a~~~~i~~v~~~Ir~~l~~~~~~~~~~v~-ilYGGsV~~~n~~~l~ 224 (256)
T 1aw2_A 160 ALEGAIIAYEPIW--------------AIGTGKAATAEDAQRIHAQIRAHIAEKSEAVAKNVV-IQYGGSVKPENAAAYF 224 (256)
T ss_dssp GGTTCEEEECCTT--------------TTTSSCCCCHHHHHHHHHHHHHHHHTTCHHHHHHCE-EEECSCCCTTTHHHHT
T ss_pred CCCCCEEEECCHH--------------CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEE-EEECCCCCHHHHHHHH
T ss_conf 1355457765400--------------146776665044567899998887641102367600-8960685885999995
Q ss_pred HHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 9719908998053367877816789999999999
Q gi|254780717|r 255 NDTGVMSAILDPEGMLIAEGPELYFQLMRSMSNS 288 (294)
Q Consensus 255 ~e~~~~~~~ld~~~~~~~~~~~~Y~~~m~~n~~~ 288 (294)
.+.++..+.+-.- ...++.+.++++...+.
T Consensus 225 ~~~~iDGvLvG~a----sl~~~~f~~ii~~~~~~ 254 (256)
T 1aw2_A 225 AQPDIDGALVGGA----ALDAKSFAAIAKAAAEA 254 (256)
T ss_dssp TSTTCCEEEESGG----GGCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEECHH----HCCHHHHHHHHHHHHHH
T ss_conf 6789886995367----66989999999999973
No 60
>>3itv_A L-rhamnose isomerase; beta/alpha barrel, HOMO-tetramer, metal-binding protein, TIM barrel; HET: PSJ; 1.60A {Pseudomonas stutzeri} PDB: 3itt_A* 3itx_A 2hcv_A* 2i57_A* 2i56_A 3ity_A 3iud_A 3iuh_A 3iui_A 3itl_A* 3ito_A* (A:51-331)
Probab=33.46 E-value=32 Score=15.03 Aligned_cols=47 Identities=6% Similarity=-0.143 Sum_probs=26.8
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEECC--C-CHHHHHHHHHHHCCCEEEEC
Q ss_conf 49788999999997549938998188--8-97899999997199089980
Q gi|254780717|r 219 MGAASLRNIRSKIISDKISCLFYGPE--F-DSKIIRSITNDTGVMSAILD 265 (294)
Q Consensus 219 ~s~~~l~~~~~~ik~~~v~~if~e~~--~-~~~~~~~ia~e~~~~~~~ld 265 (294)
.++.+..++++.+...++.+.|--.. . .....+...+..+-++..++
T Consensus 182 ~~~~~~~~~i~~~~~~~~~~~~D~~h~~~~~~~~~~~~~~~~~~~i~~iH 231 (281)
T 3itv_A 182 VQDWGTNYLIAQTLGPKAQCLVDLGHHAPNTNIEMIVARLIQFGKLGGFH 231 (281)
T ss_dssp TCSHHHHHHHHHHHCTTEEEEEEGGGSCTTCCHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCHHHHHHHHHHCCCEEEEE
T ss_conf 67899999999844876789853112225798799999998579879997
No 61
>>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium LT2} (A:1-107,A:244-301)
Probab=33.09 E-value=32 Score=14.99 Aligned_cols=65 Identities=5% Similarity=0.063 Sum_probs=42.8
Q ss_pred HHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCH---HHHHHHHHHHCCCEEEECCC
Q ss_conf 7898749812003467754449788999999997549938998188897---89999999719908998053
Q gi|254780717|r 199 YFASHYNLSIVTFPMSHSVFMGAASLRNIRSKIISDKISCLFYGPEFDS---KIIRSITNDTGVMSAILDPE 267 (294)
Q Consensus 199 Yf~~~~gl~~~~~~~~~~~~~s~~~l~~~~~~ik~~~v~~if~e~~~~~---~~~~~ia~e~~~~~~~ld~~ 267 (294)
-.++++|.++.. ....+.++....+.++.+.+.++..|+..+.... ..++.+ ++.+++++.+|..
T Consensus 27 ~aa~~~Gy~vil---~~~s~~d~~~q~~~i~~li~~~vDGIIi~~~~~~~~~~~i~~l-~~~gIPVV~id~~ 94 (165)
T 1tjy_A 27 EAGKALGIDVTY---DGPTEPSVSGQVQLVNNFVNQGYDAIIVSAVSPDGLCPALKRA-MQRGVKILTWDSD 94 (165)
T ss_dssp HHHHHHTCEEEE---CCCSSCCHHHHHHHHHHHHHTTCSEEEECCSSSSTTHHHHHHH-HHTTCEEEEESSC
T ss_pred HHHHHCCCEEEE---EECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHH-HHCCCCEEECCCC
T ss_conf 999981998999---9799999999999999999739974420133320245688876-5058520103543
No 62
>>1zbt_A RF-1, peptide chain release factor 1; peptide chain release factor 1 (RF-1), structural genomics, joint center for structural genomics, JCSG; 2.34A {Streptococcus mutans} (A:1-116)
Probab=32.99 E-value=32 Score=14.99 Aligned_cols=22 Identities=9% Similarity=-0.040 Sum_probs=14.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 2475677655556789999999
Q gi|254780717|r 126 ADDLHLWLNPLNVQYIAHVIAM 147 (294)
Q Consensus 126 ~~dpH~Wl~p~n~~~~a~~I~~ 147 (294)
.-||.+|-||..+..+.+..+.
T Consensus 33 l~~p~~w~D~~~a~~i~ke~~~ 54 (116)
T 1zbt_A 33 LSDPDVVSDTKRFXELSREEAN 54 (116)
T ss_dssp -----------------CCHHH
T ss_pred HCCCCHHHCHHHHHHHHHHHHH
T ss_conf 7098411199999999999998
No 63
>>1h6q_A TCTP, P23FYP, translationally controlled tumor protein; tumor-associated protein, function unknown; NMR {Schizosaccharomyces pombe} (A:)
Probab=32.90 E-value=32 Score=14.98 Aligned_cols=38 Identities=18% Similarity=0.281 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 56789999999974218656588998999986312223
Q gi|254780717|r 137 NVQYIAHVIAMELIKKDPRNKIIYEKNEEEFKNQLSQL 174 (294)
Q Consensus 137 n~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~L~~l 174 (294)
..+...+.|.+.|.+..|+.-+.|.+|+.++.+.+..-
T Consensus 87 yiK~YmK~i~~~L~e~~perv~~Fk~~a~~~vK~il~n 124 (168)
T 1h6q_A 87 YIKGYMKAIKARLQESNPERVPVFEKNAIGFVKKILAN 124 (168)
T ss_dssp HHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHH
T ss_conf 99999999999986629532781452718899999861
No 64
>>3knz_A Putative sugar binding protein; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 2.50A {Salmonella enterica subsp} (A:34-182)
Probab=32.86 E-value=32 Score=14.97 Aligned_cols=27 Identities=4% Similarity=-0.235 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCH
Q ss_conf 788999999997549938998188897
Q gi|254780717|r 221 AASLRNIRSKIISDKISCLFYGPEFDS 247 (294)
Q Consensus 221 ~~~l~~~~~~ik~~~v~~if~e~~~~~ 247 (294)
.+.+.++.+.+|++++++|..-...++
T Consensus 77 t~~~~~~~~~ak~~g~~~i~iT~~~~s 103 (149)
T 3knz_A 77 SLSTLAAXERARNVGHITASXAGVAPA 103 (149)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEESSSSC
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 889999998766520220257887862
No 65
>>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A* (A:183-372)
Probab=32.81 E-value=33 Score=14.97 Aligned_cols=83 Identities=11% Similarity=0.106 Sum_probs=43.8
Q ss_pred CCCCCEEEEEECHH--------HHHHHHHHHCCCCEEEE-EEC----CCCCCCCCCC-----CHHHHHHHCCCCEEEEEC
Q ss_conf 32388059997228--------99999997079441788-705----8998353356-----802456650257899967
Q gi|254780717|r 19 ARAGSLQVVVSIKP--------IHSIVSCIMQGIGTPAL-LVK----GASSPHEYSL-----RISEAMMLENADIIFWLG 80 (294)
Q Consensus 19 ~~~~~~~Vv~s~~p--------l~~lv~~I~gd~~~V~~-L~~----~g~dpH~y~~-----tp~d~~~l~~Adlii~~G 80 (294)
.++.++-|++--.. +..|++..+- .|.+ ... +..+|+..-. .+.-...+.+||+++.+|
T Consensus 21 ~~A~rPvii~G~~~~~~~a~~~l~~lae~~~i---Pv~~t~~~kg~~~~~hp~~~G~~g~~~~~~~~~~l~~aDlil~iG 97 (190)
T 2pgn_A 21 VAAKNPVILAGGGVARSGGSEALLKLAEMVGV---PVVTTSTGAGVFPETHALAMGSAGFCGWKSANDMMAAADFVLVLG 97 (190)
T ss_dssp HHCSSEEEEECHHHHHHTCHHHHHHHHHHHTC---CEEECTTTTTSSCTTSTTEEEECSTTSCHHHHHHHHHCSEEEEES
T ss_pred HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC---EEEECCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCC
T ss_conf 02343333456531234438999999998297---476235578655413330224567655145666654022200134
Q ss_pred CCCCHHHHHHHHHCCCCCCEEEEEE
Q ss_conf 6610356899973145576799751
Q gi|254780717|r 81 AEMESFLVKPLHSLNKQSNVVTLSH 105 (294)
Q Consensus 81 ~~~E~~~~~~~~~~~~~~~~i~~~~ 105 (294)
..+..+.... .......+++.+..
T Consensus 98 ~~~~~~~~~~-~~~~~~~~~i~i~~ 121 (190)
T 2pgn_A 98 SRLSDWGIAQ-GYITKMPKFVHVDT 121 (190)
T ss_dssp CCCCTTTTTT-TTTCCCCSEEEEES
T ss_pred CCCCCCCCCC-CCCCCCCCEEECCC
T ss_conf 4334455300-11235642121036
No 66
>>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} (A:1-131)
Probab=32.58 E-value=33 Score=14.94 Aligned_cols=26 Identities=4% Similarity=-0.185 Sum_probs=15.6
Q ss_pred CEEEEEECHHHHHHHHHHHCCCCEEE
Q ss_conf 80599972289999999707944178
Q gi|254780717|r 23 SLQVVVSIKPIHSIVSCIMQGIGTPA 48 (294)
Q Consensus 23 ~~~Vv~s~~pl~~lv~~I~gd~~~V~ 48 (294)
+-+||+......++.-.++..-+.+.
T Consensus 2 P~RIv~l~~~~~~~l~~Lg~~~vg~~ 27 (131)
T 1n2z_A 2 APRVITLSPANTELAFAAGITPVGVS 27 (131)
T ss_dssp CCCEEECSHHHHHHHHHTTCCCSBEE
T ss_pred CCEEEEECCHHHHHHHHCCCCCEEEE
T ss_conf 97299948428999998899858997
No 67
>>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} (A:187-366)
Probab=32.20 E-value=33 Score=14.90 Aligned_cols=83 Identities=10% Similarity=0.142 Sum_probs=42.0
Q ss_pred CCCCCEEEEEEC--------HHHHHHHHHHHCCCCEEEEEECC----CCCCCCCC------CCHHHHHHHCCCCEEEEEC
Q ss_conf 323880599972--------28999999970794417887058----99835335------6802456650257899967
Q gi|254780717|r 19 ARAGSLQVVVSI--------KPIHSIVSCIMQGIGTPALLVKG----ASSPHEYS------LRISEAMMLENADIIFWLG 80 (294)
Q Consensus 19 ~~~~~~~Vv~s~--------~pl~~lv~~I~gd~~~V~~L~~~----g~dpH~y~------~tp~d~~~l~~Adlii~~G 80 (294)
.++.++-|++-- ..+..|++.++-.. +.+.... ..+|+.|- -++.-...+.+||++|..|
T Consensus 19 ~~A~rPvii~G~~~~~~~a~~~l~~lae~~g~Pv--~~t~~~kg~~~~~hp~~~~g~~g~~~~~~~~~~i~~aD~il~iG 96 (180)
T 1ozh_A 19 AQAKNPIFLLGLMASQPENSKALRRLLETSHIPV--TSTYQAAGAVNQDNFSRFAGRVGLFNNQAGDRLLQLADLVICIG 96 (180)
T ss_dssp HHCSSEEEEECGGGGSGGGHHHHHHHHHHHCCCE--EECGGGTTTCCTTTCTTEEEECSSBTTCHHHHHHHHCSEEEEES
T ss_pred HHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC--EECCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEECC
T ss_conf 7543986457876545166899999998608971--10232367643345543444567656423312465020466637
Q ss_pred CCCCHHHHHHHHHCCCCCCEEEEEE
Q ss_conf 6610356899973145576799751
Q gi|254780717|r 81 AEMESFLVKPLHSLNKQSNVVTLSH 105 (294)
Q Consensus 81 ~~~E~~~~~~~~~~~~~~~~i~~~~ 105 (294)
..+-.+-.. ....+..+++-+..
T Consensus 97 ~~~~~~~~~--~~~~~~~~~i~i~~ 119 (180)
T 1ozh_A 97 YSPVEYEPA--MWNSGNATLVHIDV 119 (180)
T ss_dssp CCGGGSCGG--GTCCSCSEEEEEES
T ss_pred CCCCCCCCC--CCCCCCCEEEEEEC
T ss_conf 655666765--46788761799843
No 68
>>1ko7_A HPR kinase/phosphatase; protein kinase, phosphotransfer, protein phosphatase, dual activity, product, substrate, transferase, hydrolase; 1.95A {Staphylococcus xylosus} (A:1-129)
Probab=31.89 E-value=34 Score=14.87 Aligned_cols=47 Identities=2% Similarity=-0.056 Sum_probs=35.7
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEE-EECCCCHHHHHHHHHHHCCCEEEE
Q ss_conf 44978899999999754993899-818889789999999719908998
Q gi|254780717|r 218 FMGAASLRNIRSKIISDKISCLF-YGPEFDSKIIRSITNDTGVMSAIL 264 (294)
Q Consensus 218 ~~s~~~l~~~~~~ik~~~v~~if-~e~~~~~~~~~~ia~e~~~~~~~l 264 (294)
..++.+..+..+.+-..+++||+ +.....+..+-.++++.|+++...
T Consensus 63 ~l~~~~~~~~~~~~~~~~~~~iiit~~~~~~~~i~~~a~~~~iPil~t 110 (129)
T 1ko7_A 63 LLPDEERKGRMRKLCRPETPAIIVTRDLEPPEELIEAAKEHETPLITS 110 (129)
T ss_dssp HSCHHHHTTHHHHHCCTTCCCEEECTTCCCCHHHHHHHHHTTCCEEEC
T ss_pred HCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCEEEEC
T ss_conf 689999999999973679988999799999899999999819839984
No 69
>>3cf4_G Acetyl-COA decarbonylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductase; 2.00A {Methanosarcina barkeri} (G:)
Probab=31.44 E-value=34 Score=14.82 Aligned_cols=24 Identities=17% Similarity=0.022 Sum_probs=16.8
Q ss_pred CHHHHHHHCCCCEEEEECCCCCHH
Q ss_conf 802456650257899967661035
Q gi|254780717|r 63 RISEAMMLENADIIFWLGAEMESF 86 (294)
Q Consensus 63 tp~d~~~l~~Adlii~~G~~~E~~ 86 (294)
.+.-...+.+||++|..|..+..+
T Consensus 98 ~~~~~~~~~~aDlii~iG~~~~~~ 121 (170)
T 3cf4_G 98 KWPGLDGNGNYDMIITIGFKKFYI 121 (170)
T ss_dssp TCCCSSSSCCCSEEEEESCCHHHH
T ss_pred HHHHHHHHCCCCEEEEECCCCCCC
T ss_conf 788885334678899957700421
No 70
>>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A* (A:29-134)
Probab=31.43 E-value=34 Score=14.82 Aligned_cols=93 Identities=9% Similarity=0.071 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHHHHHCC-CCCCCEEEECCCHHHHHHHHCCCCEECCCCCC-CCCCCHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 9986312223589998503-00278146206215778987498120034677-544497889999999975499389981
Q gi|254780717|r 165 EEFKNQLSQLDKELHSILQ-PVEKKKIIVFHEAYRYFASHYNLSIVTFPMSH-SVFMGAASLRNIRSKIISDKISCLFYG 242 (294)
Q Consensus 165 ~~~~~~L~~l~~~~~~~~~-~~~~~~~i~~H~a~~Yf~~~~gl~~~~~~~~~-~~~~s~~~l~~~~~~ik~~~v~~if~e 242 (294)
+++.++...+...+++... ...++..+...+...|+.-.++.-..+....| ....++.++. ..++..+.+++|++
T Consensus 2 ~el~~~~~~~A~~L~~~~~~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~vpl~~~~~~~~l~---~~l~~s~~~~ii~~ 78 (106)
T 3e7w_A 2 QELWEQSDRAAAAIQKRISGEKKSPILVYGHMEPHMIVSFLGSVKAGHPYIPVDLSIPSERIA---KIIESSGAELLIHA 78 (106)
T ss_dssp HHHHHHHHHHHHHHTTTSCSSSCCCEEEEESSCHHHHHHHHHHHHHTCCEEEEETTSCHHHHH---HHHHHHTCCEEEES
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCEEEEECCCCCHHHHH---HHHHHCCCCEEEEE
T ss_conf 999999999999999846999999999985899999999999998596999728889999999---99985699899985
Q ss_pred CCCCHHHHHHHHHHHCCCEEEEC
Q ss_conf 88897899999997199089980
Q gi|254780717|r 243 PEFDSKIIRSITNDTGVMSAILD 265 (294)
Q Consensus 243 ~~~~~~~~~~ia~e~~~~~~~ld 265 (294)
+.+-.+... .+.+...++
T Consensus 79 ~~~~~~~~~-----~~~~~~~~~ 96 (106)
T 3e7w_A 79 AGLSIDAVG-----QQIQTVSAE 96 (106)
T ss_dssp SSCCTTCCC-----CSSCEEEHH
T ss_pred CCCCCCCCC-----CCCCCCCHH
T ss_conf 133221012-----343334202
No 71
>>3kws_A Putative sugar isomerase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503} (A:)
Probab=31.38 E-value=34 Score=14.82 Aligned_cols=25 Identities=12% Similarity=-0.076 Sum_probs=10.7
Q ss_pred CEEEEECCCCCHHHHHHHHHCCCCC
Q ss_conf 7899967661035689997314557
Q gi|254780717|r 74 DIIFWLGAEMESFLVKPLHSLNKQS 98 (294)
Q Consensus 74 dlii~~G~~~E~~~~~~~~~~~~~~ 98 (294)
|-|=..+.+.+.++.++.+.+.+..
T Consensus 53 ~~iEl~~~~~~~~~~~l~~~l~~~g 77 (287)
T 3kws_A 53 VGFEPGGGGLAGRVNEIKQALNGRN 77 (287)
T ss_dssp CEEECBSTTCGGGHHHHHHHHTTSS
T ss_pred CEEEECCCCCHHHHHHHHHHHHHHC
T ss_conf 9999789744545999999999839
No 72
>>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal- kingston bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori 26695} (A:10-247)
Probab=31.04 E-value=35 Score=14.78 Aligned_cols=72 Identities=7% Similarity=0.073 Sum_probs=41.3
Q ss_pred CCEEEE---CCCHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEC----CCCHHHHHHHHHHHCC
Q ss_conf 781462---062157789874981200346775444978899999999754993899818----8897899999997199
Q gi|254780717|r 187 KKKIIV---FHEAYRYFASHYNLSIVTFPMSHSVFMGAASLRNIRSKIISDKISCLFYGP----EFDSKIIRSITNDTGV 259 (294)
Q Consensus 187 ~~~~i~---~H~a~~Yf~~~~gl~~~~~~~~~~~~~s~~~l~~~~~~ik~~~v~~if~e~----~~~~~~~~~ia~e~~~ 259 (294)
+..+++ .|+++.+..+.+|.++..+....+......++.+.+ +.+.++++..+ -.+-+.+..|+++.|+
T Consensus 65 ~d~vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~le~~i----~~~~~~~~~~~~~g~~~~~~~i~~la~~~g~ 140 (238)
T 2fnu_A 65 RNEIITTPISFVATANMLLESGYTPVFAGIKNDGNIDELALEKLI----NERTKAIVSVDYAGKSVEVESVQKLCKKHSL 140 (238)
T ss_dssp SCEEEECSSSCTHHHHHHHHTTCEEEECCBCTTSSBCGGGSGGGC----CTTEEEEEEECGGGCCCCHHHHHHHHHHHTC
T ss_pred CCEEECCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHCC----CCCCCCCEEECCCCCCCCCCCCCCCCCCCCH
T ss_conf 770521134432120000036874222433333222100122205----6342011000135643234532121102211
Q ss_pred CEE
Q ss_conf 089
Q gi|254780717|r 260 MSA 262 (294)
Q Consensus 260 ~~~ 262 (294)
.++
T Consensus 141 ~ii 143 (238)
T 2fnu_A 141 SFL 143 (238)
T ss_dssp EEE
T ss_pred HHH
T ss_conf 110
No 73
>>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A* (A:)
Probab=30.47 E-value=36 Score=14.72 Aligned_cols=15 Identities=7% Similarity=-0.066 Sum_probs=7.8
Q ss_pred HHHHHHHHHHHCCCC
Q ss_conf 899999999754993
Q gi|254780717|r 223 SLRNIRSKIISDKIS 237 (294)
Q Consensus 223 ~l~~~~~~ik~~~v~ 237 (294)
+...+.+.+++.+-.
T Consensus 226 d~~~i~~~L~~~g~~ 240 (290)
T 2qul_A 226 PWDEIFGALKEIGYD 240 (290)
T ss_dssp CHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHCCC
T ss_conf 999999999984997
No 74
>>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3d7k_A* (A:182-367)
Probab=30.08 E-value=36 Score=14.68 Aligned_cols=138 Identities=10% Similarity=-0.018 Sum_probs=64.1
Q ss_pred CCCCCEEEEEEC--------HHHHHHHHHHHCCCCEEEEEEC----CCCCCCCCCC----CHHHHHHHCCCCEEEEECCC
Q ss_conf 323880599972--------2899999997079441788705----8998353356----80245665025789996766
Q gi|254780717|r 19 ARAGSLQVVVSI--------KPIHSIVSCIMQGIGTPALLVK----GASSPHEYSL----RISEAMMLENADIIFWLGAE 82 (294)
Q Consensus 19 ~~~~~~~Vv~s~--------~pl~~lv~~I~gd~~~V~~L~~----~g~dpH~y~~----tp~d~~~l~~Adlii~~G~~ 82 (294)
.++.++-|++-- ..+..|++.++-..+ .+... +..+|+..-. ++.-...+.+||++|..|..
T Consensus 21 ~~A~rP~ii~G~~~~~~~a~~~l~~lae~lg~Pv~--~t~~~~g~~~~~~p~~~G~~~~~~~~~~~~~~~aDlil~iG~~ 98 (186)
T 2uz1_A 21 RKAERPVIVLGSEASRTARKTALSAFVAATGVPVF--ADYEGLSMLSGLPDAMRGGLVQNLYSFAKADAAPDLVLMLGAR 98 (186)
T ss_dssp HHCSSEEEEECHHHHHHTCHHHHHHHHHHHCCCEE--ECGGGGGGGTTSCGGGEEEEGGGGGGTTTTTCCCSEEEEESCC
T ss_pred HHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCC--CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 72889879983242210268999999997197422--2200012235675300223310146666541254210332101
Q ss_pred CCHHHHHHHH-HCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH-CCCCCHHHH
Q ss_conf 1035689997-31455767997513544621001211123321224756776555567899999999742-186565889
Q gi|254780717|r 83 MESFLVKPLH-SLNKQSNVVTLSHSPDLHRILLRDNHSHFHDSEADDLHLWLNPLNVQYIAHVIAMELIK-KDPRNKIIY 160 (294)
Q Consensus 83 ~E~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~dpH~Wl~p~n~~~~a~~I~~~L~~-~dP~~~~~y 160 (294)
+-.+...... ....+.++|.+...... .. .+...+-++.-|+ ...+..+.+.|.. .+|......
T Consensus 99 ~~~~~~~~~~~~~~~~~~iI~id~d~~~----~~-------~~~~~~~~i~~d~---~~~l~~L~~~l~~~~~~~~~~~~ 164 (186)
T 2uz1_A 99 FGLNTGHGSGQLIPHSAQVIQVDPDACE----LG-------RLQGIALGIVADV---GGTIEALAQATAQDAAWPDRGDW 164 (186)
T ss_dssp SSGGGTTTSCSSSCTTSEEEEECSCGGG----TT-------SSSCCSEEECSCH---HHHHHHHHHHHTTSCCCCCCHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHH----HH-------CCCCHHEECCCCH---HHHHHHHHHHHHCCCHHCCCCCC
T ss_conf 1112124655567743233335621333----21-------0211000000011---15667678875112100012322
Q ss_pred HHHHHHHHHHHH
Q ss_conf 989999863122
Q gi|254780717|r 161 EKNEEEFKNQLS 172 (294)
Q Consensus 161 ~~N~~~~~~~L~ 172 (294)
.+......++..
T Consensus 165 ~~~~~~~~~~~~ 176 (186)
T 2uz1_A 165 CAKVTDLAQERY 176 (186)
T ss_dssp HHHHHHHHHHHH
T ss_pred CHHHHHCCCCCC
T ss_conf 001210011110
No 75
>>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* (A:235-443)
Probab=30.07 E-value=36 Score=14.68 Aligned_cols=85 Identities=12% Similarity=0.144 Sum_probs=42.9
Q ss_pred HCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 50257899967661035689997314557679975135446210012111233212247567765555678999999997
Q gi|254780717|r 70 LENADIIFWLGAEMESFLVKPLHSLNKQSNVVTLSHSPDLHRILLRDNHSHFHDSEADDLHLWLNPLNVQYIAHVIAMEL 149 (294)
Q Consensus 70 l~~Adlii~~G~~~E~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~dpH~Wl~p~n~~~~a~~I~~~L 149 (294)
+..||+++... ..|++-.++++.+.....++... ..+.......+. --++.+|.+...+++.|.+.+
T Consensus 122 ~~~~~~~~~~s-~~e~~~~~~~Eama~g~pvi~~~-~~~~~e~i~~g~-----------~g~~~~~~d~~~~a~~i~~l~ 188 (209)
T 2r60_A 122 ASKGSVFALTS-FYEPFGLAPVEAMASGLPAVVTR-NGGPAEILDGGK-----------YGVLVDPEDPEDIARGLLKAF 188 (209)
T ss_dssp HHTTCEEEECC-SCBCCCSHHHHHHHTTCCEEEES-SBHHHHHTGGGT-----------SSEEECTTCHHHHHHHHHHHH
T ss_pred HHHCCEEEECC-CCCCCCHHHHHHHHCCCCEEECC-CCCHHHHHCCCC-----------EEEEECCCCHHHHHHHHHHHH
T ss_conf 85398999264-24551122999998499899848-997699862896-----------599978999999999999998
Q ss_pred HHCCCCCHHHHHHHHHHHHH
Q ss_conf 42186565889989999863
Q gi|254780717|r 150 IKKDPRNKIIYEKNEEEFKN 169 (294)
Q Consensus 150 ~~~dP~~~~~y~~N~~~~~~ 169 (294)
.+|+....+.+++.+...
T Consensus 189 --~~~~~~~~~~~~a~~~~~ 206 (209)
T 2r60_A 189 --ESEETWSAYQEKGKQRVE 206 (209)
T ss_dssp --SCHHHHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHHHHH
T ss_conf --699999999999999999
No 76
>>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 1zpd_A* (A:181-357)
Probab=29.94 E-value=36 Score=14.66 Aligned_cols=85 Identities=12% Similarity=0.155 Sum_probs=45.0
Q ss_pred CCCCCEEEEEECH--------HHHHHHHHHHCCCCEEEEEECC----CCCCCCCC------CCHHHHHHHCCCCEEEEEC
Q ss_conf 3238805999722--------8999999970794417887058----99835335------6802456650257899967
Q gi|254780717|r 19 ARAGSLQVVVSIK--------PIHSIVSCIMQGIGTPALLVKG----ASSPHEYS------LRISEAMMLENADIIFWLG 80 (294)
Q Consensus 19 ~~~~~~~Vv~s~~--------pl~~lv~~I~gd~~~V~~L~~~----g~dpH~y~------~tp~d~~~l~~Adlii~~G 80 (294)
.++.++-|++-.. .+..|++..+-. -+.+.... ..+|+..- .++.-...+.+||++|.+|
T Consensus 27 ~~A~rPvii~G~g~~~~~a~~~l~~lae~~g~P--v~~t~~g~g~~~~~~p~~~G~~~g~~~~~~~~~~l~~aDlil~iG 104 (177)
T 2wvg_A 27 ANRDKVAVLVGSKLRAAGAEEAAVKFADALGGA--VATMAAAKSFFPEENPHYIGTSWGEVSYPGVEKTMKEADAVIALA 104 (177)
T ss_dssp TTCCCEEEEECTTTTTTTCHHHHHHHHHHHCCE--EEEEGGGTTSSCTTSTTEEEEECGGGSCTTHHHHHHHCSEEEEES
T ss_pred HHCCCCEEECCCCCCCCHHHHHHHHHHHHHCCC--EEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEC
T ss_conf 617687685167634202699999999875888--014356677786667665676577654699999986188899966
Q ss_pred CCCCHHHHHHHHHCCCCCCEEEEEE
Q ss_conf 6610356899973145576799751
Q gi|254780717|r 81 AEMESFLVKPLHSLNKQSNVVTLSH 105 (294)
Q Consensus 81 ~~~E~~~~~~~~~~~~~~~~i~~~~ 105 (294)
..+..+..........+.++|.+..
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~i~i~~ 129 (177)
T 2wvg_A 105 PVFNDYSTTGWTDIPDPKKLVLAEP 129 (177)
T ss_dssp CCCBTTTTTTTTCCCCTTTEEEECS
T ss_pred CCCCCCCCCCCCCCCCCCCEEEECC
T ss_conf 6146412577543588752488326
No 77
>>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cancer cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens} (A:54-132)
Probab=29.43 E-value=37 Score=14.61 Aligned_cols=57 Identities=11% Similarity=0.169 Sum_probs=34.6
Q ss_pred CHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCH--HHHHHHHHHHC
Q ss_conf 21577898749812003467754449788999999997549938998188897--89999999719
Q gi|254780717|r 195 EAYRYFASHYNLSIVTFPMSHSVFMGAASLRNIRSKIISDKISCLFYGPEFDS--KIIRSITNDTG 258 (294)
Q Consensus 195 ~a~~Yf~~~~gl~~~~~~~~~~~~~s~~~l~~~~~~ik~~~v~~if~e~~~~~--~~~~~ia~e~~ 258 (294)
-++.|+++.+|++...+-.+.- ++ .-++.++..+..+++++..... +.++.++++.|
T Consensus 14 ~a~A~~a~~~g~~~~iv~p~~~---~~----~k~~~~~~~Ga~Vi~~~~~~~~~~~~a~~~a~~~g 72 (79)
T 2rkb_A 14 IAAAYAARKLGIPATIVLPEST---SL----QVVQRLQGEGAEVQLTGKVWDEANLRAQELAKRDG 72 (79)
T ss_dssp HHHHHHHHHHTCCEEEEECTTC---CH----HHHHHHHHTTCEEEECCSSHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHCCCCCEEECCCCCC---HH----HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCC
T ss_conf 9988745214643043155210---22----67776520486422357531101599999987539
No 78
>>2ez9_A Pyruvate oxidase; TPP enzyme, reaction intermediate analogue, oxidoreductase; HET: TDK FAD; 1.60A {Lactobacillus plantarum} (A:189-368,A:555-603)
Probab=29.21 E-value=37 Score=14.58 Aligned_cols=66 Identities=11% Similarity=0.087 Sum_probs=38.3
Q ss_pred CCCCCEEEEEE------CHHHHHHHHHHHCCCCEEEEEEC----CCCCCCCCC-----CCHHHHHHHCCCCEEEEECCCC
Q ss_conf 32388059997------22899999997079441788705----899835335-----6802456650257899967661
Q gi|254780717|r 19 ARAGSLQVVVS------IKPIHSIVSCIMQGIGTPALLVK----GASSPHEYS-----LRISEAMMLENADIIFWLGAEM 83 (294)
Q Consensus 19 ~~~~~~~Vv~s------~~pl~~lv~~I~gd~~~V~~L~~----~g~dpH~y~-----~tp~d~~~l~~Adlii~~G~~~ 83 (294)
.++.++-|++- -..+..+++..+-. -+.+... +..+||..- -++.-...+.+||++|..|..+
T Consensus 22 ~~AkrPvIi~G~g~~~a~~~l~~lae~~giP--v~tt~~gkg~~pe~hP~~~G~~G~~~~~~~~~~i~~aDlIL~iG~~l 99 (229)
T 2ez9_A 22 LAAERPLIYYGIGARKAGKELEQLSKTLKIP--LMSTYPAKGIVADRYPAYLGSANRVAQKPANEALAQADVVLFVGNNY 99 (229)
T ss_dssp HHCSSEEEEECGGGTTCHHHHHHHHHHHTCC--EEECGGGTTSSCTTCTTBCCCCSSSSCHHHHHHHHHCSEEEEESCCC
T ss_pred HHCCCCCCCCCCCHHHHHHHHHHHHHHHCCC--EEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHCCC
T ss_conf 5336985334442658999999999986998--89740234334444333222322234313331022320233200111
Q ss_pred CHH
Q ss_conf 035
Q gi|254780717|r 84 ESF 86 (294)
Q Consensus 84 E~~ 86 (294)
..+
T Consensus 100 ~~~ 102 (229)
T 2ez9_A 100 PFA 102 (229)
T ss_dssp TTT
T ss_pred CCC
T ss_conf 123
No 79
>>1gqe_A Release factor 2, RF2; protein synthesis, ribosome, macromolecular mimicry, translation; 1.81A {Escherichia coli} (A:1-120)
Probab=28.68 E-value=38 Score=14.53 Aligned_cols=22 Identities=14% Similarity=0.296 Sum_probs=17.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 2475677655556789999999
Q gi|254780717|r 126 ADDLHLWLNPLNVQYIAHVIAM 147 (294)
Q Consensus 126 ~~dpH~Wl~p~n~~~~a~~I~~ 147 (294)
.-+|.+|-||..+..+.+..+.
T Consensus 41 l~~p~fw~d~~~a~~i~ke~~~ 62 (120)
T 1gqe_A 41 LEQPDVWNEPERAQALGKERSS 62 (120)
T ss_dssp HHSGGGGGSHHHHHHHHHHHHH
T ss_pred HCCCHHHHCHHHHHHHHHHHHH
T ss_conf 6097245499999999999999
No 80
>>3brs_A Periplasmic binding protein/LACI transcriptional regulator; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans isdg} (A:1-112,A:246-289)
Probab=28.68 E-value=38 Score=14.53 Aligned_cols=67 Identities=12% Similarity=0.135 Sum_probs=40.4
Q ss_pred HHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH--HHHHCCCEEEECCC
Q ss_conf 7898749812003467754449788999999997549938998188897899999--99719908998053
Q gi|254780717|r 199 YFASHYNLSIVTFPMSHSVFMGAASLRNIRSKIISDKISCLFYGPEFDSKIIRSI--TNDTGVMSAILDPE 267 (294)
Q Consensus 199 Yf~~~~gl~~~~~~~~~~~~~s~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~i--a~e~~~~~~~ld~~ 267 (294)
-.++.+|.++.... .+.+-++....+.++.+.+.++..++.-+..+......+ +++.|++++.+|..
T Consensus 31 ~~a~~~g~~v~~~~--~~s~~d~~~q~~~i~~l~~~~vdgiIi~~~~~~~~~~~i~~l~~~gIPVV~id~~ 99 (156)
T 3brs_A 31 MAAKEYEIKLEFMA--PEKEEDYLVQNELIEEAIKRKPDVILLAAADYEKTYDAAKEIKDAGIKLIVIDSG 99 (156)
T ss_dssp HHHHHHTCEEEECC--CSSTTCHHHHHHHHHHHHHTCCSEEEECCSCTTTTHHHHTTTGGGTCEEEEESSC
T ss_pred HHHHHCCCEEEEEE--CCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 99998199899996--7998899999999999997699999997872010289999886138742001343
No 81
>>2j27_A Triosephosphate isomerase glycosomal; TIM, 2PG, LOOP7, glycosome, TIM-barrel, gluconeogenesis, lipid synthesis, atomic resolution; 1.15A {Trypanosoma brucei brucei} PDB: 2j24_A 1kv5_A 1tpe_A 1tsi_A* 3tim_A 2v2c_A 2v0t_A 1tri_A 1tti_A 1mss_A 1ttj_A* 2wsq_A 1ml1_A 2wsr_A 2v2h_A 2v2d_A 1dkw_A 2vei_A 2vek_A* 2vel_A ... (A:)
Probab=28.19 E-value=39 Score=14.47 Aligned_cols=78 Identities=12% Similarity=0.253 Sum_probs=54.3
Q ss_pred CCEEEECCCHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHC-----------CCCEEEEECCCCHHHHHHHHH
Q ss_conf 781462062157789874981200346775444978899999999754-----------993899818889789999999
Q gi|254780717|r 187 KKKIIVFHEAYRYFASHYNLSIVTFPMSHSVFMGAASLRNIRSKIISD-----------KISCLFYGPEFDSKIIRSITN 255 (294)
Q Consensus 187 ~~~~i~~H~a~~Yf~~~~gl~~~~~~~~~~~~~s~~~l~~~~~~ik~~-----------~v~~if~e~~~~~~~~~~ia~ 255 (294)
++-++.|+|.| .+.++..+|+.++.++.+.||+. +++.++.. ..++.....++.
T Consensus 160 ~~~iIAYEPvw--------------AIGtg~~as~~~i~~~~~~Ir~~~~~~~~~~~~~~v~ilYGG-SV~~~N~~~l~~ 224 (250)
T 2j27_A 160 AKVVIAYEAVW--------------AIGTGKVATPQQAQEAHALIRSWVSSKIGADVAGELRILYGG-SVNGKNARTLYQ 224 (250)
T ss_dssp GGEEEEEECGG--------------GTTSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEEES-SCCTTTHHHHHT
T ss_pred CCEEEEECCEE--------------ECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCEEECC-CCCHHHHHHHHC
T ss_conf 14156504123--------------126554455055677778899999985132133777489718-989879999966
Q ss_pred HHCCCEEEECCCCCCCCCCCCCHHHHHHH
Q ss_conf 71990899805336787781678999999
Q gi|254780717|r 256 DTGVMSAILDPEGMLIAEGPELYFQLMRS 284 (294)
Q Consensus 256 e~~~~~~~ld~~~~~~~~~~~~Y~~~m~~ 284 (294)
..++..+.+-.-+. . ..|.++++.
T Consensus 225 ~~~vDG~LvG~asl----~-~~f~~Ii~~ 248 (250)
T 2j27_A 225 QRDVNGFLVGGASL----K-PEFVDIIKA 248 (250)
T ss_dssp STTCCEEEESGGGG----S-TTHHHHHHT
T ss_pred CCCCCEEEECHHHC----C-HHHHHHHHH
T ss_conf 88999789522647----8-799999996
No 82
>>1j3b_A ATP-dependent phosphoenolpyruvate carboxykinase; adenosine triphosphate, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus HB8} (A:210-216,A:361-417,A:484-529)
Probab=28.02 E-value=39 Score=14.45 Aligned_cols=33 Identities=12% Similarity=0.265 Sum_probs=18.3
Q ss_pred CHH-HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 756-77655556789999999974218656588998999986312
Q gi|254780717|r 128 DLH-LWLNPLNVQYIAHVIAMELIKKDPRNKIIYEKNEEEFKNQL 171 (294)
Q Consensus 128 dpH-~Wl~p~n~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~L 171 (294)
||- .|-|+......++.++.. |.+|+++|....
T Consensus 65 NPrnTW~Dk~aYd~~A~kLA~m-----------F~eNFkKfe~~v 98 (110)
T 1j3b_A 65 NPRETWADKEAYDQQARKLARL-----------FQENFQKYASGV 98 (110)
T ss_dssp CGGGGSSCHHHHHHHHHHHHHH-----------HHHHHHHHHTTS
T ss_pred CHHHHCCCHHHHHHHHHHHHHH-----------HHHHHHHHCCCC
T ss_conf 9856058989999999999999-----------999998635258
No 83
>>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* (A:233-392)
Probab=27.85 E-value=24 Score=15.83 Aligned_cols=78 Identities=17% Similarity=0.045 Sum_probs=46.4
Q ss_pred HHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 56650257899967661035689997314557679975135446210012111233212247567765555678999999
Q gi|254780717|r 67 AMMLENADIIFWLGAEMESFLVKPLHSLNKQSNVVTLSHSPDLHRILLRDNHSHFHDSEADDLHLWLNPLNVQYIAHVIA 146 (294)
Q Consensus 67 ~~~l~~Adlii~~G~~~E~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~dpH~Wl~p~n~~~~a~~I~ 146 (294)
..-+++||+++.-. ..|++--++++.+.-...+| .++.......... .-.++.++.+...+++.|.
T Consensus 77 ~~~~~~~di~i~~~-~~e~~~~~~~Ea~a~G~pvi-~~~~~~~~e~~~~------------~~~~~~~~~d~~~~~~~i~ 142 (160)
T 2x0d_A 77 ADLLKRSSIGISLX-ISPHPSYPPLEXAHFGLRVI-TNKYENKDLSNWH------------SNIVSLEQLNPENIAETLV 142 (160)
T ss_dssp HHHHHHCCEEECCC-SSSSCCSHHHHHHHTTCEEE-EECBTTBCGGGTB------------TTEEEESSCSHHHHHHHHH
T ss_pred HHHHHHCCEEEECC-CCCCCCHHHHHHHHCCCCEE-EECCCCCCEEEEC------------CCEEEECCCCHHHHHHHHH
T ss_conf 99999649899832-55667668999998599399-9579985257888------------9789988999999999999
Q ss_pred HHHHHCCCCCHHHH
Q ss_conf 99742186565889
Q gi|254780717|r 147 MELIKKDPRNKIIY 160 (294)
Q Consensus 147 ~~L~~~dP~~~~~y 160 (294)
..+. +|+.....
T Consensus 143 ~l~~--~~~~~~~~ 154 (160)
T 2x0d_A 143 ELCX--SFNNRDVD 154 (160)
T ss_dssp HHHH--HTC-----
T ss_pred HHHH--CCCCHHHH
T ss_conf 9984--78998999
No 84
>>1xt8_A Putative amino-acid transporter periplasmic solute-binding protein; ABC transport, cysteine uptake, spine, structural genomics; 2.00A {Campylobacter jejuni} (A:1-134,A:224-292)
Probab=27.79 E-value=39 Score=14.47 Aligned_cols=15 Identities=27% Similarity=0.246 Sum_probs=8.4
Q ss_pred CHHHHHHHHHHHHHH
Q ss_conf 915899999999996
Q gi|254780717|r 1 MKNFLIILIFLFFIL 15 (294)
Q Consensus 1 Mkk~l~~~~~~~~~l 15 (294)
|||++.+++++++++
T Consensus 1 MKk~l~~~~~~l~ll 15 (203)
T 1xt8_A 1 MKYLLPTAAAGLLLL 15 (203)
T ss_dssp ---------------
T ss_pred CCHHHHHHHHHHHHH
T ss_conf 931899999999999
No 85
>>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus} (A:184-348)
Probab=27.72 E-value=40 Score=14.42 Aligned_cols=84 Identities=7% Similarity=0.089 Sum_probs=42.3
Q ss_pred CCCCCEEEEEEC--------HHHHHHHHHHHCCCCEEEEEECCCC----CCCCCC------CCHHHHHHHCCCCEEEEEC
Q ss_conf 323880599972--------2899999997079441788705899----835335------6802456650257899967
Q gi|254780717|r 19 ARAGSLQVVVSI--------KPIHSIVSCIMQGIGTPALLVKGAS----SPHEYS------LRISEAMMLENADIIFWLG 80 (294)
Q Consensus 19 ~~~~~~~Vv~s~--------~pl~~lv~~I~gd~~~V~~L~~~g~----dpH~y~------~tp~d~~~l~~Adlii~~G 80 (294)
.+++++-|++-- ..+..|++..+-. -+++....|. +|...- -.+.-...+.+||+++..|
T Consensus 24 ~~A~rP~ii~G~~~~~~~a~~~l~~lae~~g~p--v~~t~~~k~~~~~~hp~~~G~~~g~~~~~~~~~~~~~aDlil~iG 101 (165)
T 2vbi_A 24 EKSASPVMLLGSKLRAANALAATETLADKLQCA--VTIMAAAKGFFPEDHAGFRGLYWGEVSNPGVQELVETSDALLCIA 101 (165)
T ss_dssp HTCSCEEEEECTTTTTTTCHHHHHHHHHHHCCE--EEEEGGGTTSSCTTSTTEEEEECGGGSCTTHHHHHHTCSEEEEES
T ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEE--EEECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 862324532322233332222322212432103--553023454687546534564000344643322212441133346
Q ss_pred CCCCHHHHHHHHHCCCCCCEEEEE
Q ss_conf 661035689997314557679975
Q gi|254780717|r 81 AEMESFLVKPLHSLNKQSNVVTLS 104 (294)
Q Consensus 81 ~~~E~~~~~~~~~~~~~~~~i~~~ 104 (294)
..+..+............++|.+.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~I~i~ 125 (165)
T 2vbi_A 102 PVFNDYSTVGWSAWPKGPNVILAE 125 (165)
T ss_dssp CCCBTTTTTTTTSCCCSTTEEEEC
T ss_pred CCCCCCCCCHHCCCCCCCCCEEEC
T ss_conf 544433210000136775313425
No 86
>>2d1f_A Threonine synthase; amino acid synthesis, pyridoxal-5'-phosphate, PLP, lyase; HET: PLP; 2.50A {Mycobacterium tuberculosis} (A:66-175)
Probab=27.64 E-value=40 Score=14.41 Aligned_cols=60 Identities=10% Similarity=0.170 Sum_probs=35.8
Q ss_pred CHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCH--HHHHHHHHHHCCC
Q ss_conf 21577898749812003467754449788999999997549938998188897--8999999971990
Q gi|254780717|r 195 EAYRYFASHYNLSIVTFPMSHSVFMGAASLRNIRSKIISDKISCLFYGPEFDS--KIIRSITNDTGVM 260 (294)
Q Consensus 195 ~a~~Yf~~~~gl~~~~~~~~~~~~~s~~~l~~~~~~ik~~~v~~if~e~~~~~--~~~~~ia~e~~~~ 260 (294)
-++.|+++.+|++...+-.....+. .-++.++..++.++.++..+.. +.++.++++.+.-
T Consensus 33 ~A~A~~a~~~G~~~~iv~~~~~~~~------~k~~~~~~~Ga~v~~~~~~~~~~~~~a~~~~~~~~~~ 94 (110)
T 2d1f_A 33 ASAAAYAARAGITCAVLIPQGKIAM------GKLAQAVMHGAKIIQIDGNFDDCLELARKMAADFPTI 94 (110)
T ss_dssp HHHHHHHHHHTCEEEEEECSSCCCH------HHHHHHHHTTCEEEEBSSCHHHHHHHHHHHHHHCTTE
T ss_pred HHHHHHHHHHHCCCEEECCCHHHHH------HHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCC
T ss_conf 9999996465146605426134456------7665676279899998991376788777765212112
No 87
>>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCNACYLATION; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2vsn_A* (A:364-542)
Probab=27.43 E-value=40 Score=14.39 Aligned_cols=95 Identities=8% Similarity=-0.026 Sum_probs=47.7
Q ss_pred HHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 02456650257899967661035689997314557679975135446210012111233212247567765555678999
Q gi|254780717|r 64 ISEAMMLENADIIFWLGAEMESFLVKPLHSLNKQSNVVTLSHSPDLHRILLRDNHSHFHDSEADDLHLWLNPLNVQYIAH 143 (294)
Q Consensus 64 p~d~~~l~~Adlii~~G~~~E~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~dpH~Wl~p~n~~~~a~ 143 (294)
..-...++.||+++.-. .+.+--.+++.+.-...+| +++..+.......... +...+.. ..+.+...+++
T Consensus 82 ~~~~~~~~~adi~l~ps--~~~~~~~~~Ea~a~G~pvI-~~~~~~~~e~i~~~~~------~~~~~~~-~~~~~~~~l~~ 151 (179)
T 2vsy_A 82 PQYLARYRHADLFLDTH--PYNAHTTASDALWTGCPVL-TTPGETFAARVAGSLN------HHLGLDE-MNVADDAAFVA 151 (179)
T ss_dssp HHHHHHGGGCSEEECCS--SSCCSHHHHHHHHTTCCEE-BCCCSSGGGSHHHHHH------HHHTCGG-GBCSSHHHHHH
T ss_pred HHHHHHHHCCCEEEECC--CCCCHHHHHHHHHCCCCEE-ECCCCCCHHHHHHHHH------HHCCCCC-CCCCCHHHHHH
T ss_conf 78999984585898698--9797287999997799989-7778982364899999------9779950-14599999999
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHH
Q ss_conf 999997421865658899899998631
Q gi|254780717|r 144 VIAMELIKKDPRNKIIYEKNEEEFKNQ 170 (294)
Q Consensus 144 ~I~~~L~~~dP~~~~~y~~N~~~~~~~ 170 (294)
.|...+ .+|+....+.+|+.++.++
T Consensus 152 ~i~~l~--~~~~~~~~~~~~a~~~~~~ 176 (179)
T 2vsy_A 152 KAVALA--SDPAALTALHARVDVLRRA 176 (179)
T ss_dssp HHHHHH--HCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH--CCHHHHHHHHHHHHHHHHH
T ss_conf 999996--5999999999999998862
No 88
>>2zxr_A Single-stranded DNA specific exonuclease RECJ; DNA repair, hydrolase; 2.15A {Thermus thermophilus} PDB: 2zxo_A 2zxp_A 1ir6_A (A:49-242)
Probab=27.23 E-value=40 Score=14.37 Aligned_cols=61 Identities=10% Similarity=0.064 Sum_probs=25.5
Q ss_pred CCEEEEEECHHHHHHHHHHHC-----CCCEEEEEECCCCCCCCCCCCHHHH-HHHCCCCEEEEECCCC
Q ss_conf 880599972289999999707-----9441788705899835335680245-6650257899967661
Q gi|254780717|r 22 GSLQVVVSIKPIHSIVSCIMQ-----GIGTPALLVKGASSPHEYSLRISEA-MMLENADIIFWLGAEM 83 (294)
Q Consensus 22 ~~~~Vv~s~~pl~~lv~~I~g-----d~~~V~~L~~~g~dpH~y~~tp~d~-~~l~~Adlii~~G~~~ 83 (294)
.++.|+.-..|=.+-+..+.+ -...+...+ ++..++.+...+... +..++.|++|....+-
T Consensus 25 ~~i~I~~H~d~Dgda~~s~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~vD~~~ 91 (194)
T 2zxr_A 25 KRIRVHGDYDADGLTGTAILVRGLAALGADVHPFI-PHRLEEGYGVLMERVPEHLEASDLFLTVDCGI 91 (194)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEECC-C--------------------CCEEEESCCC-
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEC-CCCCCCCCCCCHHHHHHHHHCCCEEEEECCCC
T ss_conf 97999960585077999999999998899769987-78665688879999999860899899974883
No 89
>>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha JMP134} (A:1-161)
Probab=27.06 E-value=41 Score=14.35 Aligned_cols=91 Identities=10% Similarity=0.086 Sum_probs=57.1
Q ss_pred HHCCCCC-CCEEEEC-CCHHHHHHHHCCC-CEEC--CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE-ECCCCHHHHHHH
Q ss_conf 8503002-7814620-6215778987498-1200--3467754449788999999997549938998-188897899999
Q gi|254780717|r 180 SILQPVE-KKKIIVF-HEAYRYFASHYNL-SIVT--FPMSHSVFMGAASLRNIRSKIISDKISCLFY-GPEFDSKIIRSI 253 (294)
Q Consensus 180 ~~~~~~~-~~~~i~~-H~a~~Yf~~~~gl-~~~~--~~~~~~~~~s~~~l~~~~~~ik~~~v~~if~-e~~~~~~~~~~i 253 (294)
+.+.+.. ++.++++ ...+.++.+-... +-.. +...-+.+|+..++.++.+.+++.++.+|+. .....-..++.+
T Consensus 29 ~~l~~~~~~~~liv~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~v~~~~~~~~~~~~d~IiaiGGGs~~D~aK~~ 108 (161)
T 3jzd_A 29 AEVERLGAKRALVLCTPNQQAEAERIADLLGPLSAGVYAGAVXHVPIESARDATARAREAGADCAVAVGGGSTTGLGKAI 108 (161)
T ss_dssp HHHHHTTCSCEEEECCGGGHHHHHHHHHHHGGGEEEEECCCCTTCBHHHHHHHHHHHHHHTCSEEEEEESHHHHHHHHHH
T ss_pred HHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHH
T ss_conf 99997399869999817655049999998613771899452139898999999987531489789842785544344310
Q ss_pred HHHHCCCEEEECCCCCC
Q ss_conf 99719908998053367
Q gi|254780717|r 254 TNDTGVMSAILDPEGML 270 (294)
Q Consensus 254 a~e~~~~~~~ld~~~~~ 270 (294)
+-..+.+.+.+-..++.
T Consensus 109 a~~~~~p~i~vpT~~s~ 125 (161)
T 3jzd_A 109 ALETGXPIVAIPTTYAG 125 (161)
T ss_dssp HHHHCCCEEEEECSSCC
T ss_pred HHCCCCEEEEECCCCCC
T ss_conf 11212205764131246
No 90
>>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} (A:183-361,A:548-590)
Probab=26.93 E-value=41 Score=14.33 Aligned_cols=66 Identities=8% Similarity=-0.036 Sum_probs=38.1
Q ss_pred CCCCCEEEEEECH------HHHHHHHHHHCCCCEEEEEECC----CCCCCCCCC-----CHHHHHHHCCCCEEEEECCCC
Q ss_conf 3238805999722------8999999970794417887058----998353356-----802456650257899967661
Q gi|254780717|r 19 ARAGSLQVVVSIK------PIHSIVSCIMQGIGTPALLVKG----ASSPHEYSL-----RISEAMMLENADIIFWLGAEM 83 (294)
Q Consensus 19 ~~~~~~~Vv~s~~------pl~~lv~~I~gd~~~V~~L~~~----g~dpH~y~~-----tp~d~~~l~~Adlii~~G~~~ 83 (294)
.++.++-|++--. .+..|+++.+-. -+++.... ..+|+..-. ++.-...+.+||++|.+|..+
T Consensus 21 ~~AkrPvIivG~g~~~a~~~l~~la~~~g~P--V~~t~~~kg~~~e~hp~~~G~~G~~~~~~~~~~l~~aDlVL~vG~~l 98 (222)
T 1v5e_A 21 NNSKRPVIYAGIGTMGHGPAVQELARKIKAP--VITTGKNFETFEWDFEALTGSTYRVGWKPANETILEADTVLFAGSNF 98 (222)
T ss_dssp HHCSSEEEEECGGGTTCHHHHHHHHHHHTCC--EEECTTCGGGSCTTCTTEEEESSSSSCHHHHHHHHHCSEEEEESCCC
T ss_pred HHCCCCEEEEECCCCHHHHHHHHHHHHCCCC--CCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHCCCHHCCCCCC
T ss_conf 7578988998400100379999876530232--22222233433233210000223467611233432201000023456
Q ss_pred CHH
Q ss_conf 035
Q gi|254780717|r 84 ESF 86 (294)
Q Consensus 84 E~~ 86 (294)
-.+
T Consensus 99 ~~~ 101 (222)
T 1v5e_A 99 PFS 101 (222)
T ss_dssp TTT
T ss_pred CCC
T ss_conf 665
No 91
>>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} (A:)
Probab=26.71 E-value=41 Score=14.31 Aligned_cols=33 Identities=15% Similarity=0.144 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHHC-CCCEEEEECCCCHHHHHHH
Q ss_conf 78899999999754-9938998188897899999
Q gi|254780717|r 221 AASLRNIRSKIISD-KISCLFYGPEFDSKIIRSI 253 (294)
Q Consensus 221 ~~~l~~~~~~ik~~-~v~~if~e~~~~~~~~~~i 253 (294)
++.+..+.+.+++. ++++.|++.-.++..++..
T Consensus 73 a~~v~~f~~~L~~~~~l~v~~vDEr~TT~~A~~~ 106 (138)
T 1nu0_A 73 TARARKFANRIHGRFGVEVKLHDERLSTVEARSG 106 (138)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEEECCCCCC---
T ss_pred HHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHH
T ss_conf 9999999999998629996997366459999999
No 92
>>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein structure initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} (A:)
Probab=26.28 E-value=42 Score=14.26 Aligned_cols=18 Identities=17% Similarity=0.100 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHHHHHHHH
Q ss_conf 765555678999999997
Q gi|254780717|r 132 WLNPLNVQYIAHVIAMEL 149 (294)
Q Consensus 132 Wl~p~n~~~~a~~I~~~L 149 (294)
|+.+.+...+++.|.+.+
T Consensus 143 ~~~~~~~~~l~~~i~~~~ 160 (177)
T 2f9f_A 143 YLVNADVNEIIDAXKKVS 160 (177)
T ss_dssp EEECSCHHHHHHHHHHHH
T ss_pred EECCCCHHHHHHHHHHHH
T ss_conf 981889999999999998
No 93
>>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; 2.06A {Thermotoga maritima} (A:28-147)
Probab=26.05 E-value=43 Score=14.23 Aligned_cols=73 Identities=16% Similarity=0.156 Sum_probs=50.9
Q ss_pred CCCEEEECCCHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEC--------CCCHHHHHHHHHHH
Q ss_conf 2781462062157789874981200346775444978899999999754993899818--------88978999999971
Q gi|254780717|r 186 EKKKIIVFHEAYRYFASHYNLSIVTFPMSHSVFMGAASLRNIRSKIISDKISCLFYGP--------EFDSKIIRSITNDT 257 (294)
Q Consensus 186 ~~~~~i~~H~a~~Yf~~~~gl~~~~~~~~~~~~~s~~~l~~~~~~ik~~~v~~if~e~--------~~~~~~~~~ia~e~ 257 (294)
++-.++.+.....||.+..|+.+..+...++ ..-..+.+.++++.+..|+.-+ ..+...+++.|-+.
T Consensus 27 ~G~~l~AT~gTa~~L~~~~gi~v~~v~~~~~-----~~~~~i~~~i~~g~i~~VIn~~~~~~~~~~~~dg~~iRR~Av~~ 101 (120)
T 1vmd_A 27 SKHELYATGTTGALLQEKLGLKVHRLKSGPL-----GGDQQIGAMIAEGKIDVLIFFWDPLEPQAHDVDVKALIRIATVY 101 (120)
T ss_dssp TTSEEEECHHHHHHHHHHHCCCCEECSCGGG-----THHHHHHHHHHTTSCCEEEEECCSSSCCTTSCCHHHHHHHHHHT
T ss_pred CCCEEEECCCHHHHHHHHCCCEEEEEECCCC-----CCCCCHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 4975997101999998602964899855877-----66678999997699778997777766775654099999999983
Q ss_pred CCCEEE
Q ss_conf 990899
Q gi|254780717|r 258 GVMSAI 263 (294)
Q Consensus 258 ~~~~~~ 263 (294)
|++..+
T Consensus 102 ~ipl~T 107 (120)
T 1vmd_A 102 NIPVAI 107 (120)
T ss_dssp TCCEES
T ss_pred CCCEEE
T ss_conf 987773
No 94
>>2qyw_A Vesicle transport through interaction with T- snares 1B homolog; HABC domain, protein transport, endocytosis; 2.00A {Mus musculus} PDB: 2v8s_V (A:)
Probab=25.68 E-value=43 Score=14.19 Aligned_cols=46 Identities=11% Similarity=0.078 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6555567899999999742186565889989999863122235899
Q gi|254780717|r 133 LNPLNVQYIAHVIAMELIKKDPRNKIIYEKNEEEFKNQLSQLDKEL 178 (294)
Q Consensus 133 l~p~n~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~L~~l~~~~ 178 (294)
-..+.+..++..+--.+..+.|..+..|......|..+|.++..++
T Consensus 56 ~~ldEA~eLl~QMelEvr~~p~s~R~~~~~KlR~Yksel~~lk~el 101 (102)
T 2qyw_A 56 EKQQEANETLAEXEEELRYAPLTFRNPXXSKLRNYRKDLAKLHREV 101 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 9899999999999999884987779999999999999999998762
No 95
>>3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum} (A:1-160)
Probab=25.28 E-value=44 Score=14.14 Aligned_cols=83 Identities=8% Similarity=0.047 Sum_probs=58.6
Q ss_pred CCEEE-ECCCHHHHHHHHC-CCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE-ECCCCHHHHHHHHHHHCCCEEE
Q ss_conf 78146-2062157789874-9812003467754449788999999997549938998-1888978999999971990899
Q gi|254780717|r 187 KKKII-VFHEAYRYFASHY-NLSIVTFPMSHSVFMGAASLRNIRSKIISDKISCLFY-GPEFDSKIIRSITNDTGVMSAI 263 (294)
Q Consensus 187 ~~~~i-~~H~a~~Yf~~~~-gl~~~~~~~~~~~~~s~~~l~~~~~~ik~~~v~~if~-e~~~~~~~~~~ia~e~~~~~~~ 263 (294)
++.++ +....+.++.+-. .|+..++...-+.+|+..++.++.+.+++.++.+|+. .....-..++.++...+.+++.
T Consensus 38 ~~~liitd~~~~~~~~~v~~~l~~~~i~~~~~~~~~~~~v~~~~~~~~~~~~D~iiaiGGGs~~D~aK~~A~~~~~p~i~ 117 (160)
T 3iv7_A 38 AKVXVIAGEREXSIAHKVASEIEVAIWHDEVVXHVPIEVAERARAVATDNEIDLLVCVGGGSTIGLAKAIAXTTALPIVA 117 (160)
T ss_dssp SSEEEECCGGGHHHHHHHTTTSCCSEEECCCCTTCBHHHHHHHHHHHHHTTCCEEEEEESHHHHHHHHHHHHHHCCCEEE
T ss_pred CEEEEEECCCHHHHHHHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCCCEE
T ss_conf 75999908427769999999710018976742797999999999998631798899934664422666755303455210
Q ss_pred ECCCCC
Q ss_conf 805336
Q gi|254780717|r 264 LDPEGM 269 (294)
Q Consensus 264 ld~~~~ 269 (294)
.-..++
T Consensus 118 ~pT~~s 123 (160)
T 3iv7_A 118 IPTTYA 123 (160)
T ss_dssp EECSSS
T ss_pred CCCCCC
T ss_conf 032114
No 96
>>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, infectious diseases, isomerase; 2.35A {Vibrio cholerae} (A:197-381)
Probab=24.90 E-value=14 Score=17.26 Aligned_cols=32 Identities=22% Similarity=0.250 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf 7765555678999999997421865658899899
Q gi|254780717|r 131 LWLNPLNVQYIAHVIAMELIKKDPRNKIIYEKNE 164 (294)
Q Consensus 131 ~Wl~p~n~~~~a~~I~~~L~~~dP~~~~~y~~N~ 164 (294)
.|+.+.+...+++.|...+ .+|+....+.+|+
T Consensus 151 g~~~~~d~~~l~~~i~~ll--~d~~~~~~~~~~a 182 (185)
T 3dzc_A 151 VKLVGTNQQQICDALSLLL--TDPQAYQAMSQAH 182 (185)
T ss_dssp EEECTTCHHHHHHHHHHHH--HCHHHHHHHHTSC
T ss_pred EEECCCCHHHHHHHHHHHH--CCHHHHHHHCCCC
T ss_conf 6987899999999999997--1978776404478
No 97
>>1twy_A ABC transporter, periplasmic substrate-binding protein; nysgxrc target, structural genomics, protein structure initiative; 1.65A {Vibrio cholerae o1 biovar eltor str} (A:)
Probab=24.86 E-value=45 Score=14.09 Aligned_cols=72 Identities=17% Similarity=0.103 Sum_probs=31.1
Q ss_pred CHHHHHHHHHH---HHHHHCCCC---CCCEEEEEECH---HHHHHHHHHHCC--CCEEEEEECCCCCCCCCCCCHHHHHH
Q ss_conf 91589999999---999600132---38805999722---899999997079--44178870589983533568024566
Q gi|254780717|r 1 MKNFLIILIFL---FFILSSVAR---AGSLQVVVSIK---PIHSIVSCIMQG--IGTPALLVKGASSPHEYSLRISEAMM 69 (294)
Q Consensus 1 Mkk~l~~~~~~---~~~l~~~~~---~~~~~Vv~s~~---pl~~lv~~I~gd--~~~V~~L~~~g~dpH~y~~tp~d~~~ 69 (294)
|||.+++++++ ++++++|++ .+.++|.++.. ....+++.--.. .++|.....+. ..-+.+
T Consensus 1 Mk~~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~Fek~~p~i~V~~~~~~s---------~~~~~~ 71 (290)
T 1twy_A 1 MSLIRMALAAVCALLFSITTMTPFVQASEITISGSTSVARIXDVLAEKYNQQHPETYVAVQGVGS---------TAGISL 71 (290)
T ss_dssp ---------------------------CEEEEEECHHHHHHHHHHHHHHHHHCTTCEEEEEESCH---------HHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEECCC---------HHHHHH
T ss_conf 96089999999999999984543113875999984629999999999999888895799985783---------789999
Q ss_pred H--CCCCEEEEECC
Q ss_conf 5--02578999676
Q gi|254780717|r 70 L--ENADIIFWLGA 81 (294)
Q Consensus 70 l--~~Adlii~~G~ 81 (294)
+ ..+|.++....
T Consensus 72 i~~g~~~~~~~~~~ 85 (290)
T 1twy_A 72 LKKGVADIAXTSRY 85 (290)
T ss_dssp HHTTSCSEEEESSC
T ss_pred HHHHHCCCCCCCHH
T ss_conf 98640243446366
No 98
>>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} (A:)
Probab=24.56 E-value=45 Score=14.06 Aligned_cols=66 Identities=6% Similarity=0.156 Sum_probs=38.9
Q ss_pred CHHHHHHHHCCCCEECC--C--CCCCCCCCHHHHHHHHHHH-HHCCCCEEEEECCCCHHHHHHHHHHHCCC
Q ss_conf 21577898749812003--4--6775444978899999999-75499389981888978999999971990
Q gi|254780717|r 195 EAYRYFASHYNLSIVTF--P--MSHSVFMGAASLRNIRSKI-ISDKISCLFYGPEFDSKIIRSITNDTGVM 260 (294)
Q Consensus 195 ~a~~Yf~~~~gl~~~~~--~--~~~~~~~s~~~l~~~~~~i-k~~~v~~if~e~~~~~~~~~~ia~e~~~~ 260 (294)
+.+..+.+.|+.....+ . ..+...+....+..+.+.+ +..++++.|++...+++.++....+.|..
T Consensus 45 ~~L~~ii~~~~~~~iviG~p~~~~g~~~~~~~~~~~~~~~l~~~~~i~v~~~dE~~ss~~a~~~l~~~g~~ 115 (150)
T 1vhx_A 45 SRLSELIKDYTIDKIVLGFPKNXNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLTTXAAEKXLIAADVS 115 (150)
T ss_dssp HHHHHHHTTSEEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHCCCC
T ss_conf 99999997634362885164234776217889999999973557783279841555799999999975997
No 99
>>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone, THDP, metal, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A* (A:196-343)
Probab=24.27 E-value=46 Score=14.02 Aligned_cols=85 Identities=11% Similarity=0.010 Sum_probs=44.7
Q ss_pred CCCEEEEEE------CHHHHHHHHHHHCCCCEEEEEECCCC--CCCCCC-CCHHHHHHHCCCCEEEEECCCCCHHHHHHH
Q ss_conf 388059997------22899999997079441788705899--835335-680245665025789996766103568999
Q gi|254780717|r 21 AGSLQVVVS------IKPIHSIVSCIMQGIGTPALLVKGAS--SPHEYS-LRISEAMMLENADIIFWLGAEMESFLVKPL 91 (294)
Q Consensus 21 ~~~~~Vv~s------~~pl~~lv~~I~gd~~~V~~L~~~g~--dpH~y~-~tp~d~~~l~~Adlii~~G~~~E~~~~~~~ 91 (294)
+.++-|++- ..-+..+++..+...+. .++...|. +-|.+- -++.-...+.+||++|..|..+-.+.....
T Consensus 24 A~rpviv~G~g~~~a~~~l~~lae~~~~pv~~-~~~~~~~~~~~~~~~~~G~~~~~~~~~~aDlvl~iG~~~~~~~~~~~ 102 (148)
T 3hww_A 24 QKRGVVVAGRMSAEEGKKVALWAQTLGWPLIG-DVLSQTGQPLPCADLWLGNAKATSELQQAQIVVQLGSSLTGKRLLQW 102 (148)
T ss_dssp TSCEEEEECBCCHHHHHHHHHHHHHHTCCEEE-CTTTCSCCSSCCHHHHTTSHHHHHHHTTCSEEEEESBCCCCHHHHHH
T ss_pred CCCEEEEEECCCHHHHHHHHHHHHHCCCCEEE-ECCCCCCCCCCCCCHHCCCHHHHHHCCCCEEEEECCCCCCCCCCCCC
T ss_conf 88647874034425689998767640476011-02567778764542102787677525762078613666655443333
Q ss_pred HHCCCCCCEEEEEEC
Q ss_conf 731455767997513
Q gi|254780717|r 92 HSLNKQSNVVTLSHS 106 (294)
Q Consensus 92 ~~~~~~~~~i~~~~~ 106 (294)
....+..+++.+...
T Consensus 103 ~~~~~~~~~i~i~~d 117 (148)
T 3hww_A 103 QASCEPEEYWIVDDI 117 (148)
T ss_dssp HHHCCCSEEEEEESS
T ss_pred CCCCCCCEEEECCCC
T ss_conf 224787316970587
No 100
>>2v5b_A Triosephosphate isomerase; TIM, unfolding, monotctim, glycosome, gluconeogenesis, lipid synthesis, monomeric mutant, glycolysis, pentose shunt; 2.00A {Trypanosoma cruzi} (A:)
Probab=24.06 E-value=46 Score=14.00 Aligned_cols=77 Identities=6% Similarity=0.242 Sum_probs=54.8
Q ss_pred CCEEEECCCHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHC-----------CCCEEEEECCCCHHHHHHHHH
Q ss_conf 781462062157789874981200346775444978899999999754-----------993899818889789999999
Q gi|254780717|r 187 KKKIIVFHEAYRYFASHYNLSIVTFPMSHSVFMGAASLRNIRSKIISD-----------KISCLFYGPEFDSKIIRSITN 255 (294)
Q Consensus 187 ~~~~i~~H~a~~Yf~~~~gl~~~~~~~~~~~~~s~~~l~~~~~~ik~~-----------~v~~if~e~~~~~~~~~~ia~ 255 (294)
++-++.|+|.| .+.++..+|+.++.++.+.||+. +++ |++.-..++.....++.
T Consensus 154 ~~~vIAYEPvw--------------aIGtg~~as~~~i~~~~~~Ir~~~~~~~~~~~~~~v~-ilYGGsV~~~N~~~~~~ 218 (244)
T 2v5b_A 154 SRVVIAYEPVW--------------AIGTGKVATPQQAQEVHELLRRWVRSKLGTDIAAQLR-ILYGGSVTAKNARTLYQ 218 (244)
T ss_dssp GGEEEEECCHH--------------HHSSSCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCE-EEECSCCCHHHHHHHHT
T ss_pred CCCEEEECCHH--------------CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC-EEECCCCCHHHHHHHHC
T ss_conf 56168735321--------------1344545563023345789999998741743357752-89738888749999967
Q ss_pred HHCCCEEEECCCCCCCCCCCCCHHHHHH
Q ss_conf 7199089980533678778167899999
Q gi|254780717|r 256 DTGVMSAILDPEGMLIAEGPELYFQLMR 283 (294)
Q Consensus 256 e~~~~~~~ld~~~~~~~~~~~~Y~~~m~ 283 (294)
..++..+.+-.-+.. ..|.++++
T Consensus 219 ~~~vDG~LvG~asl~-----~~f~~Ii~ 241 (244)
T 2v5b_A 219 MRDINGFLVGGASLK-----PEFVEIIE 241 (244)
T ss_dssp STTCCEEEESGGGSS-----TTHHHHHH
T ss_pred CCCCCEEEECHHHCC-----HHHHHHHH
T ss_conf 889996895316468-----89999999
No 101
>>2g7z_A Conserved hypothetical protein SPY1493; long-fatty acid binding protein, lipid binding protein, PSI, MCSG; HET: MSE HXA; 2.05A {Streptococcus pyogenes serotype M1} (A:1-157)
Probab=23.98 E-value=46 Score=13.99 Aligned_cols=55 Identities=7% Similarity=0.057 Sum_probs=40.4
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCE---EEEECCCCH--HHHHHHHHHHCCCEEEECCCCCC
Q ss_conf 54449788999999997549938---998188897--89999999719908998053367
Q gi|254780717|r 216 SVFMGAASLRNIRSKIISDKISC---LFYGPEFDS--KIIRSITNDTGVMSAILDPEGML 270 (294)
Q Consensus 216 ~~~~s~~~l~~~~~~ik~~~v~~---if~e~~~~~--~~~~~ia~e~~~~~~~ld~~~~~ 270 (294)
...|++.++.++.+.+.+.+... +...+..+. +.+...+++.+.++.++|+-..+
T Consensus 65 TS~ps~~~~~~~f~~~~~~gyd~ii~i~iS~~lSgt~~~a~~a~~~~~~~i~ViDS~~~s 124 (157)
T 2g7z_A 65 TSQPPVGLFAETYENLVKKGVTDIVAIHLSPALSGTIEASRQGAEIAEAPVTVLDSGFTD 124 (157)
T ss_dssp EECCCHHHHHHHHHHHHHTTCCEEEEEECCTTTCTHHHHHHHHHHHHTCCEEEEECSSCH
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCH
T ss_conf 479999999999999976799849999677401389999999862448978999777513
No 102
>>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} (A:53-203)
Probab=23.96 E-value=46 Score=13.98 Aligned_cols=82 Identities=6% Similarity=0.033 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHCCCCEECCCCCC-CCCCCHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 9998631222358999850300278146206215778987498120034677-544497889999999975499389981
Q gi|254780717|r 164 EEEFKNQLSQLDKELHSILQPVEKKKIIVFHEAYRYFASHYNLSIVTFPMSH-SVFMGAASLRNIRSKIISDKISCLFYG 242 (294)
Q Consensus 164 ~~~~~~~L~~l~~~~~~~~~~~~~~~~i~~H~a~~Yf~~~~gl~~~~~~~~~-~~~~s~~~l~~~~~~ik~~~v~~if~e 242 (294)
++++..+...+.+.+++.--...++..+...+...|+.-.|+.-..+....+ ....++. ++...++..+.+++|++
T Consensus 1 y~el~~~~~~~a~~L~~~Gi~~gd~V~i~~~n~~~~~~~~~a~~~~g~~~~~i~~~~~~~---~~~~~~~~~~~~~ii~~ 77 (151)
T 1mdb_A 1 YRELDTRADRLAAGFQKLGIQQKDRVVVQLPNIKEFFEVIFALFRLGALPVFALPSHRSS---EITYFCEFAEAAAYIIP 77 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTCEEEECCCSSHHHHHHHHHHHHHTCEEEECCTTCCHH---HHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHHCCCEEEEE
T ss_conf 999999999999999975968869999993897999999999998595999549878999---99999873045179940
Q ss_pred CCCCHH
Q ss_conf 888978
Q gi|254780717|r 243 PEFDSK 248 (294)
Q Consensus 243 ~~~~~~ 248 (294)
.+....
T Consensus 78 ~~~~~~ 83 (151)
T 1mdb_A 78 DAYSGF 83 (151)
T ss_dssp SEETTE
T ss_pred CCCCCC
T ss_conf 311231
No 103
>>1yz1_A Translationally controlled tumor protein; unknown function; 2.00A {Homo sapiens} (A:)
Probab=23.73 E-value=47 Score=13.96 Aligned_cols=39 Identities=10% Similarity=0.049 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 556789999999974218656588998999986312223
Q gi|254780717|r 136 LNVQYIAHVIAMELIKKDPRNKIIYEKNEEEFKNQLSQL 174 (294)
Q Consensus 136 ~n~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~L~~l 174 (294)
...+.+.+.|.+.|.+..|+..+.|+++++++.+.+..-
T Consensus 92 ~yiK~YmK~i~~~L~e~~~e~v~~Fk~~a~~~vK~il~~ 130 (174)
T 1yz1_A 92 KYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILAN 130 (174)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 999999999999866109889999998869999998735
No 104
>>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei} (A:)
Probab=23.51 E-value=47 Score=13.93 Aligned_cols=44 Identities=20% Similarity=0.332 Sum_probs=35.6
Q ss_pred CHHHHHHHHHHHHHCCCCE-EEEECCCCHHHHHHHHHHHCCCEEEECC
Q ss_conf 9788999999997549938-9981888978999999971990899805
Q gi|254780717|r 220 GAASLRNIRSKIISDKISC-LFYGPEFDSKIIRSITNDTGVMSAILDP 266 (294)
Q Consensus 220 s~~~l~~~~~~ik~~~v~~-if~e~~~~~~~~~~ia~e~~~~~~~ld~ 266 (294)
....|..+++.+++.+|++ +|.||. ...++ .++++|+..++|+.
T Consensus 140 ~~~~L~~~i~~Lk~~gIrVSLFiDP~--~~qi~-~A~~~GAd~VELhT 184 (278)
T 3gk0_A 140 HFDAVRAACKQLADAGVRVSLFIDPD--EAQIR-AAHETGAPVIELHT 184 (278)
T ss_dssp THHHHHHHHHHHHHTTCEEEEEECSC--HHHHH-HHHHHTCSEEEECC
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECCC--HHHHH-HHHHHCCCEEEECC
T ss_conf 78789999999987287279996453--14477-87761667676500
No 105
>>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} (A:)
Probab=23.48 E-value=47 Score=13.93 Aligned_cols=21 Identities=5% Similarity=0.088 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHCCCCEEEE
Q ss_conf 788999999997549938998
Q gi|254780717|r 221 AASLRNIRSKIISDKISCLFY 241 (294)
Q Consensus 221 ~~~l~~~~~~ik~~~v~~if~ 241 (294)
..............+..+.+.
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~ 331 (394)
T 1o69_A 311 HPKISKLIEDLKNKQIETRPL 331 (394)
T ss_dssp CHHHHHHHHHHHHTTCCCBCC
T ss_pred CCCHHHHHHHHHHCCCCEEEE
T ss_conf 114999999999779987861
No 106
>>2fn9_A Ribose ABC transporter, periplasmic ribose- binding protein; RBP, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima MSB8} PDB: 2fn8_A* (A:1-106,A:247-290)
Probab=23.21 E-value=48 Score=13.89 Aligned_cols=65 Identities=12% Similarity=0.161 Sum_probs=42.0
Q ss_pred HHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCH---HHHHHHHHHHCCCEEEECCC
Q ss_conf 77898749812003467754449788999999997549938998188897---89999999719908998053
Q gi|254780717|r 198 RYFASHYNLSIVTFPMSHSVFMGAASLRNIRSKIISDKISCLFYGPEFDS---KIIRSITNDTGVMSAILDPE 267 (294)
Q Consensus 198 ~Yf~~~~gl~~~~~~~~~~~~~s~~~l~~~~~~ik~~~v~~if~e~~~~~---~~~~~ia~e~~~~~~~ld~~ 267 (294)
.--++++|..+... ..+.++....+.++.+...++..|+..+.... ..++.+ .+.|++++.+|..
T Consensus 25 e~aa~~~G~~v~l~----~~~~d~~~~~~~i~~l~~~~vdgIIi~~~~~~~~~~~i~~l-~~~gIPvV~id~~ 92 (150)
T 2fn9_A 25 KQRAEQLGYEATIF----DSQNDTAKESAHFDAIIAAGYDAIIFNPTDADGSIANVKRA-KEAGIPVFCVDRG 92 (150)
T ss_dssp HHHHHHTTCEEEEE----ECTTCHHHHHHHHHHHHHTTCSEEEECCSCTTTTHHHHHHH-HHTTCCEEEESSC
T ss_pred HHHHHHCCCEEEEE----ECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHH-HHCCCCCEEECCC
T ss_conf 99999859989999----68999899999999999659986987315652149999999-9759962564367
No 107
>>1txj_A Translationally controlled tumour-associated protein (TCTP) from plasmodium knowlesi,...; structural genomics consortium, SGC; 2.00A {Plasmodium knowlesi} (A:)
Probab=22.96 E-value=49 Score=13.86 Aligned_cols=39 Identities=10% Similarity=0.171 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 556789999999974218656588998999986312223
Q gi|254780717|r 136 LNVQYIAHVIAMELIKKDPRNKIIYEKNEEEFKNQLSQL 174 (294)
Q Consensus 136 ~n~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~L~~l 174 (294)
...+...+.|.+.|.+-.|+....|+++++++.+.+..-
T Consensus 89 ~yiK~YmK~ik~~L~e~~perv~~Fk~~a~~~vK~il~~ 127 (171)
T 1txj_A 89 VYIKNYMQKILKYLEEKKPDRVDVFKTKAQPLIKHILTN 127 (171)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999876509778899998779999999851
No 108
>>2cwd_A Low molecular weight phosphotyrosine protein phosphatase; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus HB8} (A:)
Probab=22.92 E-value=48 Score=13.87 Aligned_cols=28 Identities=14% Similarity=-0.007 Sum_probs=16.4
Q ss_pred CCHHHHHHHCCCCEEEEECCCCCHHHHH
Q ss_conf 6802456650257899967661035689
Q gi|254780717|r 62 LRISEAMMLENADIIFWLGAEMESFLVK 89 (294)
Q Consensus 62 ~tp~d~~~l~~Adlii~~G~~~E~~~~~ 89 (294)
.+.-.-..+.++|+||....+.-.++..
T Consensus 73 s~~l~~~~~~~~d~ii~m~~~~~~~~~~ 100 (161)
T 2cwd_A 73 ARRLTREDVLAYDHILVMDRENLEEVLR 100 (161)
T ss_dssp CCBCCHHHHHHCSEEEESSHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 4310012332454654426999999999
No 109
>>1ytl_A Acetyl-COA decarbonylase/synthase complex epsilon subunit 2; structural genomics, protein structure initiative; 1.80A {Archaeoglobus fulgidus} (A:)
Probab=22.90 E-value=49 Score=13.85 Aligned_cols=44 Identities=9% Similarity=0.046 Sum_probs=23.7
Q ss_pred CHHHHHHHCCCCEEEEECCCCCHHHH--HHHHHCCCCCCEEEEEEC
Q ss_conf 80245665025789996766103568--999731455767997513
Q gi|254780717|r 63 RISEAMMLENADIIFWLGAEMESFLV--KPLHSLNKQSNVVTLSHS 106 (294)
Q Consensus 63 tp~d~~~l~~Adlii~~G~~~E~~~~--~~~~~~~~~~~~i~~~~~ 106 (294)
.+.-.+.+.+||+++..|..+..... ........+.+++.+...
T Consensus 99 ~~~~~~~~~~aDlil~lG~~~~~~~~~~~~~~~~~~~~~iI~i~~d 144 (174)
T 1ytl_A 99 DWKGFDGQGNYDLVLMLGSIYYHGSQMLAAIKNFAPHIRALAIDRY 144 (174)
T ss_dssp TCCCTTSSCCCSEEEEESCCHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred HHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCC
T ss_conf 9999842456788999578656301024663457999979998898
No 110
>>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I (A:1-43,A:166-287)
Probab=22.81 E-value=49 Score=13.84 Aligned_cols=47 Identities=9% Similarity=0.101 Sum_probs=21.7
Q ss_pred CCHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCH
Q ss_conf 621577898749812003467754449788999999997549938998188897
Q gi|254780717|r 194 HEAYRYFASHYNLSIVTFPMSHSVFMGAASLRNIRSKIISDKISCLFYGPEFDS 247 (294)
Q Consensus 194 H~a~~Yf~~~~gl~~~~~~~~~~~~~s~~~l~~~~~~ik~~~v~~if~e~~~~~ 247 (294)
...-.++++..|+....-... |.+-.++++..++.+.-+++.+ ..+.
T Consensus 68 ~~ta~~iA~~lGI~~v~a~~~------p~~K~~~I~~~~~~~~V~mvGD-G~ND 114 (165)
T 3a1c_A 68 WRSAEAISRELNLDLVIAEVL------PHQKSEEVKKLQAKEVVAFVGD-GIND 114 (165)
T ss_dssp HHHHHHHHHHHTCSEEECSCC------TTCHHHHHHHHTTTCCEEEEEC-TTTC
T ss_pred HHHHHHHHHHCCCCEEEEECC------HHHHHHHHHHHHCCCEEEEECC-CCCC
T ss_conf 799999998649745864228------7887778999976998899668-8665
No 111
>>1vcs_A Vesicle transport through interaction with T- snares homolog 1A; HABC domain, VTI1, UP and DOWN three helix bundle, LEFT-handed twist; NMR {Mus musculus} (A:)
Probab=22.31 E-value=50 Score=13.78 Aligned_cols=53 Identities=9% Similarity=0.228 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 76555567899999999742186565889989999863122235899985030
Q gi|254780717|r 132 WLNPLNVQYIAHVIAMELIKKDPRNKIIYEKNEEEFKNQLSQLDKELHSILQP 184 (294)
Q Consensus 132 Wl~p~n~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~L~~l~~~~~~~~~~ 184 (294)
=-..+.+..++..+--.+..+.|..+..|......|..+|+++...++.....
T Consensus 44 e~~ldEA~ell~qMelE~r~~p~s~R~~~~~klR~Yk~el~~lk~e~~~~~~~ 96 (102)
T 1vcs_A 44 EKQLEEARELLEQMDLEVREIPPQSRGMYSNRMRSYKQEMGKLETDFKRSRIA 96 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCTTTHHHHHHHHHHHHHHHHHHHHHTHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98689999999999999872987789999999999999999999999987750
No 112
>>2q5c_A NTRC family transcriptional regulator; structural genomics, PSI-2, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824} (A:79-168)
Probab=22.27 E-value=50 Score=13.78 Aligned_cols=71 Identities=14% Similarity=0.264 Sum_probs=48.8
Q ss_pred CCCCE-EEEC---CCHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCC
Q ss_conf 02781-4620---6215778987498120034677544497889999999975499389981888978999999971990
Q gi|254780717|r 185 VEKKK-IIVF---HEAYRYFASHYNLSIVTFPMSHSVFMGAASLRNIRSKIISDKISCLFYGPEFDSKIIRSITNDTGVM 260 (294)
Q Consensus 185 ~~~~~-~i~~---H~a~~Yf~~~~gl~~~~~~~~~~~~~s~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~~ 260 (294)
..++. ++.+ -+.+..|++-+|++....... +..++...++.+++.++.+++.. ..+-.+|++.|.+
T Consensus 15 ~~~kiaivgf~~~~~~~~~~~~ll~~~i~~~~~~-----~~~e~~~~i~~l~~~G~~vVIG~-----~~~~~~A~~~Gl~ 84 (90)
T 2q5c_A 15 FGNELALIAYKHSIVDKHEIEAMLGVKIKEFLFS-----SEDEITTLISKVKTENIKIVVSG-----KTVTDEAIKQGLY 84 (90)
T ss_dssp GCSEEEEEEESSCSSCHHHHHHHHTCEEEEEEEC-----SGGGHHHHHHHHHHTTCCEEEEC-----HHHHHHHHHTTCE
T ss_pred HCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEEC-----CHHHHHHHHHHHHHCCCCEEECC-----HHHHHHHHHCCCC
T ss_conf 2897899957861368999999959945999965-----88999999999998699799998-----7999999984996
Q ss_pred EEEEC
Q ss_conf 89980
Q gi|254780717|r 261 SAILD 265 (294)
Q Consensus 261 ~~~ld 265 (294)
.+.+.
T Consensus 85 ~vli~ 89 (90)
T 2q5c_A 85 GETIN 89 (90)
T ss_dssp EEECC
T ss_pred EEEEE
T ss_conf 89996
No 113
>>3g1w_A Sugar ABC transporter; sugar-binding protein, target 11229F, transport protein, structural genomics, PSI-2; 2.02A {Bacillus halodurans c-125} (A:1-108,A:243-305)
Probab=22.23 E-value=50 Score=13.77 Aligned_cols=66 Identities=11% Similarity=0.082 Sum_probs=38.5
Q ss_pred HHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH--HHHHCCCEEEECCC
Q ss_conf 7898749812003467754449788999999997549938998188897899999--99719908998053
Q gi|254780717|r 199 YFASHYNLSIVTFPMSHSVFMGAASLRNIRSKIISDKISCLFYGPEFDSKIIRSI--TNDTGVMSAILDPE 267 (294)
Q Consensus 199 Yf~~~~gl~~~~~~~~~~~~~s~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~i--a~e~~~~~~~ld~~ 267 (294)
-.++++|.++.... ..+-........++.+...++..|+..+..+......+ +++.|++++.+|..
T Consensus 28 ~aa~~~G~~~~~~~---~~~~d~~~q~~~ie~li~~~vdGIii~p~d~~~~~~~i~~a~~~gIPVV~id~~ 95 (171)
T 3g1w_A 28 DAAQALNVTVEYRG---AAQYDIQEQITVLEQAIAKNPAGIAISAIDPVELTDTINKAVDAGIPIVLFDSG 95 (171)
T ss_dssp HHHHHHTCEEEEEE---CSSSCHHHHHHHHHHHHHHCCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESSC
T ss_pred HHHHHCCCEEEEEE---CCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCC
T ss_conf 99997299799997---999999999999999997799999996787377899999999869929998167
No 114
>>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} (A:12-131)
Probab=22.01 E-value=51 Score=13.74 Aligned_cols=72 Identities=11% Similarity=0.053 Sum_probs=49.0
Q ss_pred CCCEEEECCCHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEC--CC------CHHHHHHHHHHH
Q ss_conf 2781462062157789874981200346775444978899999999754993899818--88------978999999971
Q gi|254780717|r 186 EKKKIIVFHEAYRYFASHYNLSIVTFPMSHSVFMGAASLRNIRSKIISDKISCLFYGP--EF------DSKIIRSITNDT 257 (294)
Q Consensus 186 ~~~~~i~~H~a~~Yf~~~~gl~~~~~~~~~~~~~s~~~l~~~~~~ik~~~v~~if~e~--~~------~~~~~~~ia~e~ 257 (294)
.+-.++.+-....||.+..|+.+..+...++ ..-..+.+.++++++..|+.-+ .. +...+++.|-+.
T Consensus 27 ~Gf~l~AT~gTa~~L~e~~gi~~~~v~~~~~-----~g~~~i~~~i~~g~i~~VIn~~~~~~~~~~~~d~~~iRR~Av~~ 101 (120)
T 1b93_A 27 EQHVLYATGTTGNLISRATGMNVNAMLSGPM-----GGDQQVGALISEGKIDVLIFFWDPLNAVPHDPDVKALLRLATVW 101 (120)
T ss_dssp TTSEEEEETTHHHHHHHHHCCCCEEECCGGG-----THHHHHHHHHHTTCCCEEEEECCTTSCCTTHHHHHHHHHHHHHT
T ss_pred CCCEEEECCCHHHHHHHHCCCCEEEEECCCC-----CCCCCHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHC
T ss_conf 7985997742999999725971687630566-----66765999997698338997577767876523299999999971
Q ss_pred CCCEE
Q ss_conf 99089
Q gi|254780717|r 258 GVMSA 262 (294)
Q Consensus 258 ~~~~~ 262 (294)
|++..
T Consensus 102 ~Vpl~ 106 (120)
T 1b93_A 102 NIPVA 106 (120)
T ss_dssp TCCEE
T ss_pred CCCEE
T ss_conf 99556
No 115
>>2q7x_A UPF0052 protein SP_1565; NP_346012.1, uncharacterized protein SP_1565, structural genomics, joint center for structural genomics; HET: MLY MSE; 2.00A {Streptococcus pneumoniae TIGR4} (A:1-46,A:122-130,A:172-326)
Probab=21.92 E-value=50 Score=13.75 Aligned_cols=19 Identities=11% Similarity=-0.041 Sum_probs=16.6
Q ss_pred CCCCHHHHHHHCCCCEEEE
Q ss_conf 3568024566502578999
Q gi|254780717|r 60 YSLRISEAMMLENADIIFW 78 (294)
Q Consensus 60 y~~tp~d~~~l~~Adlii~ 78 (294)
=++.|.-+++|.+||+|++
T Consensus 56 ~~a~p~ai~AI~~ADlIvl 74 (210)
T 2q7x_A 56 PLASRRVVQTILESDXIVL 74 (210)
T ss_dssp CCBCSHHHHHHHHCSEEEE
T ss_pred CCCCHHHHHHHHHCCEEEE
T ss_conf 8779999999961998999
No 116
>>3ff4_A Uncharacterized protein; structural genomics, PSI- 2, protein structure initiative, midwest center for structural genomics; 2.10A {Cytophaga hutchinsonii atcc 33406} (A:)
Probab=21.63 E-value=52 Score=13.69 Aligned_cols=44 Identities=16% Similarity=0.257 Sum_probs=34.6
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCEEE
Q ss_conf 97889999999975499389981888978999999971990899
Q gi|254780717|r 220 GAASLRNIRSKIISDKISCLFYGPEFDSKIIRSITNDTGVMSAI 263 (294)
Q Consensus 220 s~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~~~~~ 263 (294)
.+.....+.+.+.+.+++.+...+.--+..+..++++.|+++++
T Consensus 67 ~~~~~~~~~~e~~~~gik~v~~~~~~~~e~~~~~a~~~gi~iip 110 (122)
T 3ff4_A 67 NPQNQLSEYNYILSLKPKRVIFNPGTENEELEEILSENGIEPVI 110 (122)
T ss_dssp CHHHHGGGHHHHHHHCCSEEEECTTCCCHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCEEEC
T ss_conf 88998999999985399999993598799999999996997994
No 117
>>2wvv_A Alpha-L-fucosidase; alpha-L-fucose, hydrolase, glycoside hydrolase family 29; 1.73A {Bacteroides thetaiotaomicron} PDB: 2wvv_B 2wvt_A* 2wvu_A* 2wvs_A* (A:1-351)
Probab=21.56 E-value=36 Score=14.71 Aligned_cols=23 Identities=4% Similarity=-0.142 Sum_probs=16.7
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 49788999999997549938998
Q gi|254780717|r 219 MGAASLRNIRSKIISDKISCLFY 241 (294)
Q Consensus 219 ~s~~~l~~~~~~ik~~~v~~if~ 241 (294)
.|+++|....-.+..++-..++.
T Consensus 294 ks~~~li~~l~~~v~~~gnlLLN 316 (351)
T 2wvv_A 294 KTPIEVIDRIVHAVSMGGNMVVN 316 (351)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHHHCCCCEEEEE
T ss_conf 89999999999973689459996
No 118
>>3c9h_A ABC transporter, substrate binding protein; structural genomics, MCSG, PSI-2, protein structure initiative; HET: CIT; 1.90A {Agrobacterium tumefaciens str} (A:)
Probab=21.47 E-value=42 Score=14.28 Aligned_cols=54 Identities=13% Similarity=0.032 Sum_probs=25.6
Q ss_pred CHHHHHHHHHHHHHHH---CCCC-------CCCEEEEEECHH----HHHHHHHHHCC--CCEEEEEECCC
Q ss_conf 9158999999999960---0132-------388059997228----99999997079--44178870589
Q gi|254780717|r 1 MKNFLIILIFLFFILS---SVAR-------AGSLQVVVSIKP----IHSIVSCIMQG--IGTPALLVKGA 54 (294)
Q Consensus 1 Mkk~l~~~~~~~~~l~---~~~~-------~~~~~Vv~s~~p----l~~lv~~I~gd--~~~V~~L~~~g 54 (294)
|||.+.++++++++++ +|+. .++.+|...... +..+++.--.. .++|+....+.
T Consensus 1 Mkk~~~~~~~~~~~~~~la~c~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~F~~~~p~i~V~~~~~~~ 70 (355)
T 3c9h_A 1 MRICLFLCLCLCMASPALAQVAVFPALSGKTDAQTLVVYSSLDEPLATPMIEGFQKANPDIAVHYEDMLT 70 (355)
T ss_dssp ---------------CEEEEEEEECCTTC----CEEEEEECSCHHHHHHHHHHHHHHCTTCEEEEEECCH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCC
T ss_conf 9369999999999999999987433335677799799996988789999999999878992799996887
No 119
>>2d59_A Hypothetical protein PH1109; COA binding, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.65A {Pyrococcus horikoshii OT3} (A:)
Probab=21.32 E-value=52 Score=13.65 Aligned_cols=44 Identities=5% Similarity=0.080 Sum_probs=34.9
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCEEE
Q ss_conf 97889999999975499389981888978999999971990899
Q gi|254780717|r 220 GAASLRNIRSKIISDKISCLFYGPEFDSKIIRSITNDTGVMSAI 263 (294)
Q Consensus 220 s~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~~~~~ 263 (294)
.+.....+.+.+.+.++++++..++--+.....++++.|++++-
T Consensus 86 p~~~~~~i~~e~~~~g~k~v~~~~~g~~e~~~~~a~~~gi~vvg 129 (144)
T 2d59_A 86 KPKLTMEYVEQAIKKGAKVVWFQYNTYNREASKKADEAGLIIVA 129 (144)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECTTCCCHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCEEEC
T ss_conf 88999999999997299999994264499999999996998895
No 120
>>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} (A:51-197)
Probab=21.29 E-value=52 Score=13.65 Aligned_cols=91 Identities=9% Similarity=0.077 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHCCCCEECCC-CCCCCCCCHHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf 98631222358999850300278146206215778987498120034-67754449788999999997549938998188
Q gi|254780717|r 166 EFKNQLSQLDKELHSILQPVEKKKIIVFHEAYRYFASHYNLSIVTFP-MSHSVFMGAASLRNIRSKIISDKISCLFYGPE 244 (294)
Q Consensus 166 ~~~~~L~~l~~~~~~~~~~~~~~~~i~~H~a~~Yf~~~~gl~~~~~~-~~~~~~~s~~~l~~~~~~ik~~~v~~if~e~~ 244 (294)
++.++.+.+...+++.--...++..+...+...|+.-.|+.-..+.. .--....++. ++...++..+.+.+|+++.
T Consensus 2 el~~~~~~~a~~L~~~Gl~~gd~V~i~~~n~~~~~~~~~A~~~~G~v~vpi~~~~~~~---~l~~~l~~~~~~~~~~~~~ 78 (147)
T 1v25_A 2 EVYQRARRLMGGLRALGVGVGDRVATLGFNHFRHLEAYFAVPGMGAVLHTANPRLSPK---EIAYILNHAEDKVLLFDPN 78 (147)
T ss_dssp HHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEECCTTSCHH---HHHHHHHHHTCSEEEECGG
T ss_pred HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCEEEEEECCCCCHH---HHHHHHHHHCCCCCCCCCC
T ss_conf 9999999999999977968869999990898999999999998490999508888999---9999986302441024421
Q ss_pred CCHHHHHHHHHHHCCC
Q ss_conf 8978999999971990
Q gi|254780717|r 245 FDSKIIRSITNDTGVM 260 (294)
Q Consensus 245 ~~~~~~~~ia~e~~~~ 260 (294)
......+.. .+....
T Consensus 79 ~~~~~~~~~-~~~~~~ 93 (147)
T 1v25_A 79 LLPLVEAIR-GELKTV 93 (147)
T ss_dssp GHHHHHHHG-GGCSSC
T ss_pred CCHHHHHHH-HCCCCC
T ss_conf 104578775-114553
No 121
>>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} PDB: 3l6r_A* 3hmk_A* 3l6c_A* (A:73-154)
Probab=21.24 E-value=53 Score=13.64 Aligned_cols=58 Identities=16% Similarity=0.145 Sum_probs=37.1
Q ss_pred CHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCH--HHHHHHHHHHCC
Q ss_conf 21577898749812003467754449788999999997549938998188897--899999997199
Q gi|254780717|r 195 EAYRYFASHYNLSIVTFPMSHSVFMGAASLRNIRSKIISDKISCLFYGPEFDS--KIIRSITNDTGV 259 (294)
Q Consensus 195 ~a~~Yf~~~~gl~~~~~~~~~~~~~s~~~l~~~~~~ik~~~v~~if~e~~~~~--~~~~~ia~e~~~ 259 (294)
-++.|.++.||++...+-.+ ... + .-++.++..+..+++++...+. +.++.++++.+.
T Consensus 17 ~a~A~~a~~~G~~~~iv~p~-~~~--~----~k~~~l~~~GA~Vi~~~~~~~~~~~~a~~~a~~~~~ 76 (82)
T 3l6b_A 17 QALTYAAKLEGIPAYIVVPQ-TAP--D----CKKLAIQAYGASIVYCEPSDESRENVAKRVTEETEG 76 (82)
T ss_dssp HHHHHHHHHTTCCEEEEEET-TSC--H----HHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHCCCCCCCCCCH-HHH--H----HHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHCCC
T ss_conf 99999999859986556860-567--8----998887516874387055045666666666750485
No 122
>>1m1n_B Nitrogenase molybdenum-iron protein beta chain; atomic resolution, FEMO cofactor, nitrogen fixation, central nitrogen ligand; HET: HCA CLF CFN; 1.16A {Azotobacter vinelandii} (B:33-63,B:339-522)
Probab=20.93 E-value=53 Score=13.60 Aligned_cols=109 Identities=15% Similarity=0.100 Sum_probs=61.7
Q ss_pred CCCCCEEEECCC-----HHHHHHHHCCCCEECCCCCCCC--------------------C-CCHHHHHHHHHHHHHCCCC
Q ss_conf 002781462062-----1577898749812003467754--------------------4-4978899999999754993
Q gi|254780717|r 184 PVEKKKIIVFHE-----AYRYFASHYNLSIVTFPMSHSV--------------------F-MGAASLRNIRSKIISDKIS 237 (294)
Q Consensus 184 ~~~~~~~i~~H~-----a~~Yf~~~~gl~~~~~~~~~~~--------------------~-~s~~~l~~~~~~ik~~~v~ 237 (294)
-+.++.++++.+ ++.-|.++.|+++..+...... + .-..+..++.+.|++.+..
T Consensus 53 ~l~GKrv~I~gd~~~~~~la~fL~ElGm~vv~~~~~~~~~~~~e~~~~~l~~~~~~~~~~v~~~~d~~e~~~~i~~~~pD 132 (215)
T 1m1n_B 53 WLHGKRFALWGDPDFVMGLVKFLLELGCEPVHILCHNGNKRWKKAVDAILAASPYGKNATVYIGKDLWHLRSLVFTDKPD 132 (215)
T ss_dssp HHTTCEEEEECCHHHHHHHHHHHHHTTCEEEEEEETTCCHHHHHHHHHHHHTSGGGTTCEEEESCCHHHHHHHHHHSCCS
T ss_pred HHCCCEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCC
T ss_conf 74798799988828999999999986997349994589978999999998525568787799689999999998627999
Q ss_pred EEEEECCCC--HHHHHHHHHHHCCCEEEEC-CC----CC--CCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 899818889--7899999997199089980-53----36--78778167899999999999874
Q gi|254780717|r 238 CLFYGPEFD--SKIIRSITNDTGVMSAILD-PE----GM--LIAEGPELYFQLMRSMSNSIAKN 292 (294)
Q Consensus 238 ~if~e~~~~--~~~~~~ia~e~~~~~~~ld-~~----~~--~~~~~~~~Y~~~m~~n~~~l~k~ 292 (294)
.+|..+.-. ....+.++.++|++.+.+. |. +. ..--|.++-+.++....+++...
T Consensus 133 Liig~s~ek~~a~~~r~~a~~lgiPli~~g~P~~d~~~~~~~p~~GY~Gal~L~e~i~n~l~~~ 196 (215)
T 1m1n_B 133 FMIGNSYGKFIQRDTLHKGKEFEVPLIRIGFPIFDRHHLHRSTTLGYEGAMQILTTLVNSILER 196 (215)
T ss_dssp EEEECTTHHHHHHHHHHHCGGGCCCEEECSSCCCSSSSGGGCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 9997885300112345678764998798217747864577776523878999999999999997
No 123
>>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} (A:259-455)
Probab=20.74 E-value=54 Score=13.58 Aligned_cols=68 Identities=15% Similarity=0.117 Sum_probs=36.1
Q ss_pred CCCCCCEEEEEECHH-----HHHHHHHHHCC-CCEEE-EEECCC----CCCCCC-----CCCHHHHHHHCCCCEEEEECC
Q ss_conf 132388059997228-----99999997079-44178-870589----983533-----568024566502578999676
Q gi|254780717|r 18 VARAGSLQVVVSIKP-----IHSIVSCIMQG-IGTPA-LLVKGA----SSPHEY-----SLRISEAMMLENADIIFWLGA 81 (294)
Q Consensus 18 ~~~~~~~~Vv~s~~p-----l~~lv~~I~gd-~~~V~-~L~~~g----~dpH~y-----~~tp~d~~~l~~Adlii~~G~ 81 (294)
..++.++-|++-... ....+++++.. ...|. +....| .+|+.. --++.-...+++||++|..|.
T Consensus 28 L~~A~rPvii~G~~~~~~~~a~~~l~~lae~~~ipv~~t~~~kg~~~~~~p~~~G~~G~~~~~~~~~~i~~aDlil~iG~ 107 (197)
T 1t9b_A 28 INLAKKPVLYVGAGILNHADGPRLLKELSDRAQIPVTTTLQGLGSFDQEDPKSLDMLGMHGCATANLAVQNADLIIAVGA 107 (197)
T ss_dssp HHTCSSEEEEECGGGGGSTTHHHHHHHHHHHTTCCEEECGGGTTSSCTTSTTEEEECSTTSCHHHHHHHHHCSEEEEESC
T ss_pred HHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHCCCCEEEEECC
T ss_conf 98377987983266430046899999998721412798666677668756401221454235889987715998999899
Q ss_pred CCCH
Q ss_conf 6103
Q gi|254780717|r 82 EMES 85 (294)
Q Consensus 82 ~~E~ 85 (294)
.+..
T Consensus 108 ~~~~ 111 (197)
T 1t9b_A 108 RFDD 111 (197)
T ss_dssp CCCT
T ss_pred CCCC
T ss_conf 7774
No 124
>>3ed4_A Arylsulfatase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium NYSGXRC, transferase; 1.70A {Escherichia coli} (A:1-388)
Probab=20.70 E-value=39 Score=14.46 Aligned_cols=28 Identities=18% Similarity=-0.004 Sum_probs=16.0
Q ss_pred CHHHHHHHHHHHHHHHCC----CCCCCEEEEE
Q ss_conf 915899999999996001----3238805999
Q gi|254780717|r 1 MKNFLIILIFLFFILSSV----ARAGSLQVVV 28 (294)
Q Consensus 1 Mkk~l~~~~~~~~~l~~~----~~~~~~~Vv~ 28 (294)
||++++++++++.+++++ +..++++||.
T Consensus 1 M~~~~~~~~~~~~~~~~~~~~~~~~~~pNIi~ 32 (388)
T 3ed4_A 1 MSLASLIGLAVCTGNAFSPALAAEAKQPNLVI 32 (388)
T ss_dssp --------------------------CCEEEE
T ss_pred CCHHHHHHHHHHHHHHHCHHHHCCCCCCEEEE
T ss_conf 95899999999999874511120589980899
No 125
>>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open active site loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A* (A:199-361)
Probab=20.46 E-value=55 Score=13.54 Aligned_cols=84 Identities=11% Similarity=0.065 Sum_probs=42.4
Q ss_pred CCCCCEEEEEEC--------HHHHHHHHHHHCCCCEEEEEECC----CCCCCCCC------CCHHHHHHHCCCCEEEEEC
Q ss_conf 323880599972--------28999999970794417887058----99835335------6802456650257899967
Q gi|254780717|r 19 ARAGSLQVVVSI--------KPIHSIVSCIMQGIGTPALLVKG----ASSPHEYS------LRISEAMMLENADIIFWLG 80 (294)
Q Consensus 19 ~~~~~~~Vv~s~--------~pl~~lv~~I~gd~~~V~~L~~~----g~dpH~y~------~tp~d~~~l~~Adlii~~G 80 (294)
.++.++-|++-- ..+..+++..+-. -+.+.... ..+|+..- .++.-.+.+.+||++|..|
T Consensus 22 ~~A~rPvii~G~~~~~~~a~~~l~~lae~~g~p--v~~t~~~kg~~~~~~p~~~G~~~g~~~~~~~~~~~~~aDlvl~iG 99 (163)
T 2nxw_A 22 RSATSPVLMVCVEVRRYGLEAKVAELAQRLGVP--VVTTFMGRGLLADAPTPPLGTYIGVAGDAEITRLVEESDGLFLLG 99 (163)
T ss_dssp HHCSSEEEEECHHHHHTTCHHHHHHHHHHHCSC--EEECGGGTTTTTTSSSCCSCBCCGGGSCHHHHHHHHTCSEEEEES
T ss_pred HHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCC--CCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEC
T ss_conf 750112221001134433343100002333432--233421001123553000011256543111101245565213653
Q ss_pred CCCCHHHHHHHHHCCCCCCEEEEE
Q ss_conf 661035689997314557679975
Q gi|254780717|r 81 AEMESFLVKPLHSLNKQSNVVTLS 104 (294)
Q Consensus 81 ~~~E~~~~~~~~~~~~~~~~i~~~ 104 (294)
..+..+...-......+.++|.+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~I~v~ 123 (163)
T 2nxw_A 100 AILSDTNFAVSQRKIDLRKTIHAF 123 (163)
T ss_dssp CCBCSSTTSBCTTTSCGGGEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 433665222233223343322233
No 126
>>1lci_A Luciferase; oxidoreductase, monooxygenase, photoprotein, luminescence; 2.00A {Photinus pyralis} (A:53-212,A:361-437)
Probab=20.19 E-value=55 Score=13.50 Aligned_cols=89 Identities=8% Similarity=0.162 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHCCCCEEC---CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 9986312223589998503002781462062157789874981200---3467754449788999999997549938998
Q gi|254780717|r 165 EEFKNQLSQLDKELHSILQPVEKKKIIVFHEAYRYFASHYNLSIVT---FPMSHSVFMGAASLRNIRSKIISDKISCLFY 241 (294)
Q Consensus 165 ~~~~~~L~~l~~~~~~~~~~~~~~~~i~~H~a~~Yf~~~~gl~~~~---~~~~~~~~~s~~~l~~~~~~ik~~~v~~if~ 241 (294)
.++.++...+...+++.--...++..+...+...|+.-.|+.-..+ +..++.. +.. ++...++..+.+++|+
T Consensus 2 ~el~~~~~~~A~~L~~~Gi~~gd~V~i~~~n~~e~~~~~~A~~~~G~v~v~i~~~~--~~~---~l~~~l~~~~~~~ii~ 76 (237)
T 1lci_A 2 AEYFEMSVRLAEAMKRYGLNTNHRIVVCSENSLQFFMPVLGALFIGVAVAPANDIY--NER---ELLNSMNISQPTVVFV 76 (237)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTCEEEEECSSCSSTHHHHHHHHHHTCEEEECCTTC--CHH---HHHHHHHHHCCSEEEE
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCEEEECCCCC--CHH---HHHHHHHHCCCEEEEE
T ss_conf 99999999999999974959979999990897999999999998591999549988--999---9999998429829999
Q ss_pred ECCCCHHHHHHHHHHHCC
Q ss_conf 188897899999997199
Q gi|254780717|r 242 GPEFDSKIIRSITNDTGV 259 (294)
Q Consensus 242 e~~~~~~~~~~ia~e~~~ 259 (294)
+...-.+.. .+.++...
T Consensus 77 ~~~~~~~~~-~~~~~~~~ 93 (237)
T 1lci_A 77 SKKGLQKIL-NVQKKLPI 93 (237)
T ss_dssp CGGGHHHHH-HHHHHCTT
T ss_pred ECCHHHHHH-HHHHCCCC
T ss_conf 621467665-44430776
No 127
>>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} (A:)
Probab=20.06 E-value=56 Score=13.48 Aligned_cols=53 Identities=11% Similarity=0.031 Sum_probs=37.7
Q ss_pred HHHHHHHHCCCCEEEE--EECC-------------CCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHH
Q ss_conf 9999997079441788--7058-------------998353356802456650257899967661035
Q gi|254780717|r 34 HSIVSCIMQGIGTPAL--LVKG-------------ASSPHEYSLRISEAMMLENADIIFWLGAEMESF 86 (294)
Q Consensus 34 ~~lv~~I~gd~~~V~~--L~~~-------------g~dpH~y~~tp~d~~~l~~Adlii~~G~~~E~~ 86 (294)
..+.+..+++.+.|.+ +.+. |.|.....+++=....+..+|+||..+.....+
T Consensus 21 Eai~~~~~~~~~~v~SAG~~~~~~~p~~~~~l~~~gi~~~~~~s~~l~~~~~~~~DlIi~m~~~~~~~ 88 (139)
T 1jl3_A 21 EGWAKQYLGDEWKVYSAGIEAHGLNPNAVKAMKEVGIDISNQTSDIIDSDILNNADLVVTLCGDAADK 88 (139)
T ss_dssp HHHHHHHSCTTEEEEEEESSCCCCCHHHHHHHHHTTCCCTTCCCCBCCHHHHTTCSEEEECSHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCHHHHHCCCHHHH
T ss_conf 99999846365113777777877780699999971867543455305675503020667605203433
No 128
>>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, enzyme, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli} (A:205-389,A:582-616)
Probab=20.02 E-value=56 Score=13.48 Aligned_cols=87 Identities=8% Similarity=0.050 Sum_probs=46.3
Q ss_pred CCCCCEEEEEE--------CHHHHHHHHHHHCCCCEEE---EEECCCCCCCCCC------CCHHHHHHHCCCCEEEEECC
Q ss_conf 32388059997--------2289999999707944178---8705899835335------68024566502578999676
Q gi|254780717|r 19 ARAGSLQVVVS--------IKPIHSIVSCIMQGIGTPA---LLVKGASSPHEYS------LRISEAMMLENADIIFWLGA 81 (294)
Q Consensus 19 ~~~~~~~Vv~s--------~~pl~~lv~~I~gd~~~V~---~L~~~g~dpH~y~------~tp~d~~~l~~Adlii~~G~ 81 (294)
.++.++-|++- ...+..|++.++-..+..- .++ +..+|+.+- .++...+.+++||+|+.+|.
T Consensus 20 ~~AkrPvIi~G~g~~~~~a~~~l~~Lae~lgiPV~~t~~~kg~~-~~~hP~~~G~~~g~~~~~~~~~~l~~aDlIL~iG~ 98 (220)
T 2pan_A 20 IQAERPVIVAGGGVINADAAALLQQFAELTSVPVIPTLXGWGCI-PDDHELXAGXVGLQTAHRYGNATLLASDXVFGIGN 98 (220)
T ss_dssp HTCSSEEEEECHHHHHTTCHHHHHHHHHHHTCCEEECTTTTTSS-CTTSTTBCCCCSSSSCCHHHHHHHHHCSEEEEESC
T ss_pred HCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEECC
T ss_conf 73898289977750113089999999972078732343556753-23332323223454442234430343311344144
Q ss_pred CCCHHHHHHHHHCCCCCCEEEEEEC
Q ss_conf 6103568999731455767997513
Q gi|254780717|r 82 EMESFLVKPLHSLNKQSNVVTLSHS 106 (294)
Q Consensus 82 ~~E~~~~~~~~~~~~~~~~i~~~~~ 106 (294)
.+..+-...........++|.+...
T Consensus 99 ~l~~~~t~~~~~~~~~~~iI~I~~d 123 (220)
T 2pan_A 99 RFANRHTGSVEKYTEGRKIVHIDIE 123 (220)
T ss_dssp CCCHHHHSSHHHHHTTCEEEEEESC
T ss_pred CCCCCCCCCCCCCCCCCEEEEEECC
T ss_conf 5554343221235889818999786
Done!