HHSEARCH alignment of GI: 254780717 and SCOP domain: d1pq4a_

Alignment
>d1pq4a_ c.92.2.2 (A:) Periplasmic zinc binding protein ZnuA {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=100.00  E-value=0  Score=456.44  Aligned_cols=265  Identities=25%  Similarity=0.399  Sum_probs=238.1

Q ss_pred             CCEEEEEECHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCEE
Q ss_conf             88059997228999999970794417887058998353356802456650257899967661035689997314557679
Q gi|254780717|r   22 GSLQVVVSIKPIHSIVSCIMQGIGTPALLVKGASSPHEYSLRISEAMMLENADIIFWLGAEMESFLVKPLHSLNKQSNVV  101 (294)
Q Consensus        22 ~~~~Vv~s~~pl~~lv~~I~gd~~~V~~L~~~g~dpH~y~~tp~d~~~l~~Adlii~~G~~~E~~~~~~~~~~~~~~~~i  101 (294)
                      .+++||||++|+++||++|+||+++|++|+|+|.|||+|+|||+|+++|++||+|||||.+||.|+.+.+.+.+++..++
T Consensus         1 d~l~Vv~si~pl~~lv~~i~gd~~~V~~L~p~g~dPH~y~~~psd~~~l~~ADliv~~G~~lE~~~~~~~~~~~~~~~~v   80 (289)
T d1pq4a_           1 DAMDITVSIPPQQYFLEKIGGDLVRVSVLVPGNNDPHTYEPKPQQLAALSEAEAYVLIGLGFEQPWLEKLKAANANMKLI   80 (289)
T ss_dssp             CCEEEEESSHHHHHHHHHHHGGGEEEEESSCTTSCGGGCCCCHHHHHHGGGCSEEEECCTTTTTTTHHHHHHHCSSSEEE
T ss_pred             CCCEEEEECHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCCCC
T ss_conf             99889997689999999983893479980698979835768999999996599999969632678999998745698741


Q ss_pred             EEEECCCCCCCC------------------------CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
Q ss_conf             975135446210------------------------01211123321224756776555567899999999742186565
Q gi|254780717|r  102 TLSHSPDLHRIL------------------------LRDNHSHFHDSEADDLHLWLNPLNVQYIAHVIAMELIKKDPRNK  157 (294)
Q Consensus       102 ~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~dpH~Wl~p~n~~~~a~~I~~~L~~~dP~~~  157 (294)
                      ..+.+.......                        ..++++++|+++..|||+||||.|++.++++|+++|+++||+++
T Consensus        81 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DPH~Wldp~n~~~~a~~I~~~L~~~dP~~~  160 (289)
T d1pq4a_          81 DSAQGITPLEMEKHDHSHGEEEGHDDHSHDGHDHGSESEKEKAKGALMVADPHIWLSPTLVKRQATTIAKELAELDPDNR  160 (289)
T ss_dssp             ETTTTCCCCBSCC----------------------------------CCBCCCGGGCHHHHHHHHHHHHHHHHHHCGGGH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             02366443110135665532466665544564455421211000133455512200430178999999999987504203


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCC
Q ss_conf             88998999986312223589998503002781462062157789874981200346775444978899999999754993
Q gi|254780717|r  158 IIYEKNEEEFKNQLSQLDKELHSILQPVEKKKIIVFHEAYRYFASHYNLSIVTFPMSHSVFMGAASLRNIRSKIISDKIS  237 (294)
Q Consensus       158 ~~y~~N~~~~~~~L~~l~~~~~~~~~~~~~~~~i~~H~a~~Yf~~~~gl~~~~~~~~~~~~~s~~~l~~~~~~ik~~~v~  237 (294)
                      +.|++|+++|.++|.+|++++++++++++++.++++||+|+||+++|||++.++. .++.+||++++.++++.+|+++|+
T Consensus       161 ~~y~~N~~~~~~~L~~l~~~~~~~l~~~~~~~~v~~H~a~~Yf~~~ygl~~~~~~-~~~~eps~~~l~~l~~~ik~~~i~  239 (289)
T d1pq4a_         161 DQYEANLAAFLAELERLNQELGQILQPLPQRKFIVFHPSWAYFARDYNLVQIPIE-VEGQEPSAQELKQLIDTAKENNLT  239 (289)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCEEEESSCCCHHHHHHTTCEEEESC-BTTBCCCHHHHHHHHHHHHTTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHCCCEEEEEE-CCCCCCCHHHHHHHHHHHHHCCCC
T ss_conf             4565518988765899989999872532478323325328779885485044421-368899989999999999974998


Q ss_pred             EEEEECCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf             899818889789999999719908998053367877816789999999999987419
Q gi|254780717|r  238 CLFYGPEFDSKIIRSITNDTGVMSAILDPEGMLIAEGPELYFQLMRSMSNSIAKNCS  294 (294)
Q Consensus       238 ~if~e~~~~~~~~~~ia~e~~~~~~~ld~~~~~~~~~~~~Y~~~m~~n~~~l~k~ls  294 (294)
                      |||+|+|++++.++.|++++|++++.+||+|.       +|.++|+.|+++|++|+|
T Consensus       240 ~if~e~q~~~~~~~~la~~~gv~v~~ldpl~~-------~y~~~m~~n~~~i~~A~s  289 (289)
T d1pq4a_         240 MVFGETQFSTKSSEAIAAEIGAGVELLDPLAA-------DWSSNLKAVAQKIANANS  289 (289)
T ss_dssp             EEEEETTSCCHHHHHHHHHHTCEEEEECTTCS-------SHHHHHHHHHHHHHHHHC
T ss_pred             EEEECCCCCCHHHHHHHHHCCCCEEEECCCCC-------CHHHHHHHHHHHHHHHCC
T ss_conf             99973898939999999980998798788732-------599999999999998649


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: "Helical backbone" metal receptor
family: TroA-like
domain: Periplasmic zinc binding protein ZnuA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]