HHSEARCH alignment of GI: 254780717 and SCOP domain: d1xvla1

Alignment
>d1xvla1 c.92.2.2 (A:49-327) Mn transporter MntC {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=100.00  E-value=0  Score=441.83  Aligned_cols=268  Identities=15%  Similarity=0.279  Sum_probs=237.7

Q ss_pred             CCCCCEEEEEECHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCC
Q ss_conf             32388059997228999999970794417887058998353356802456650257899967661035689997314557
Q gi|254780717|r   19 ARAGSLQVVVSIKPIHSIVSCIMQGIGTPALLVKGASSPHEYSLRISEAMMLENADIIFWLGAEMESFLVKPLHSLNKQS   98 (294)
Q Consensus        19 ~~~~~~~Vv~s~~pl~~lv~~I~gd~~~V~~L~~~g~dpH~y~~tp~d~~~l~~Adlii~~G~~~E~~~~~~~~~~~~~~   98 (294)
                      .+.++++||||+.||+++|++|+||+++|++|+|+|+|||+|+|+|+|++++++||+|||||.+||+|+.+++.+.... 
T Consensus         2 ~~~~k~~Vvas~~~l~~iv~~I~Gd~~~V~~l~p~~~dPH~y~~~p~d~~~l~~ADliv~~G~~lE~~l~~~~~~~~~~-   80 (279)
T d1xvla1           2 ETEEKKKVLTTFTVLADMVQNVAGDKLVVESITRIGAEIHGYEPTPSDIVKAQDADLILYNGMNLERWFEQFLGNVKDV-   80 (279)
T ss_dssp             CCCCCCEEEESSHHHHHHHHHHHTTTSEEEESSCSSCCCSSCCCCHHHHHHHHTCSEEEECCTTSSTTHHHHHHTSSSC-
T ss_pred             CCCCCCEEEEECHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCEEEECCCCCCHHHHHHHHHCCCC-
T ss_conf             9888867999876999999998188448998069897964576899999999739999997998518899987641355-


Q ss_pred             CEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             67997513544621001211123321224756776555567899999999742186565889989999863122235899
Q gi|254780717|r   99 NVVTLSHSPDLHRILLRDNHSHFHDSEADDLHLWLNPLNVQYIAHVIAMELIKKDPRNKIIYEKNEEEFKNQLSQLDKEL  178 (294)
Q Consensus        99 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~dpH~Wl~p~n~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~L~~l~~~~  178 (294)
                      .++.+......      .+..++|+++..|||+||||.|++.++++|+++|+++||++++.|++|+++|.++|+++++++
T Consensus        81 ~~~~~~~~~~~------~~~~~~~~~~~~dpH~Wldp~~~~~~a~~Ia~~L~~~dP~~~~~y~~n~~~~~~~l~~l~~~~  154 (279)
T d1xvla1          81 PSVVLTEGIEP------IPIADGPYTDKPNPHAWMSPRNALVYVENIRQAFVELDPDNAKYYNANAAVYSEQLKAIDRQL  154 (279)
T ss_dssp             CEEETTTTCCC------CBCCSSSSTTSBCCCGGGSHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCEECCCCCC------CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             42111035456------554455554567742111768899999999999987585544679998997740056657999


Q ss_pred             HHHCC--CCCCCEEEECCCHHHHHHHHCCCCEEC-CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHH
Q ss_conf             98503--002781462062157789874981200-346775444978899999999754993899818889789999999
Q gi|254780717|r  179 HSILQ--PVEKKKIIVFHEAYRYFASHYNLSIVT-FPMSHSVFMGAASLRNIRSKIISDKISCLFYGPEFDSKIIRSITN  255 (294)
Q Consensus       179 ~~~~~--~~~~~~~i~~H~a~~Yf~~~~gl~~~~-~~~~~~~~~s~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~  255 (294)
                      ++.++  |.+++.++++|++|+||+++|||++.+ +..+++.+||++++.++++.+|+++++|||+|++++++.++.|++
T Consensus       155 ~~~l~~~~~~~~~~v~~H~a~~Yf~~~~gl~~~~~~~~~~~~~ps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~ia~  234 (279)
T d1xvla1         155 GADLEQVPANQRFLVSCEGAFSYLARDYGMEEIYMWPINAEQQFTPKQVQTVIEEVKTNNVPTIFCESTVSDKGQKQVAQ  234 (279)
T ss_dssp             HHHHTTSCGGGCEEEEEESTTHHHHHHTTCEEEEEESSSSSCSCCHHHHHHHHHHHHTTTCSEEEEETTSCSHHHHHHHT
T ss_pred             HHHHHHCCCCCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHH
T ss_conf             99996188655289995453013566369626630256885668988999999998754861898247788299999999


Q ss_pred             HHCCCEEE---ECCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf             71990899---8053367877816789999999999987419
Q gi|254780717|r  256 DTGVMSAI---LDPEGMLIAEGPELYFQLMRSMSNSIAKNCS  294 (294)
Q Consensus       256 e~~~~~~~---ld~~~~~~~~~~~~Y~~~m~~n~~~l~k~ls  294 (294)
                      +++++++.   +|+++.... ..++|++||+.|+++|.++|.
T Consensus       235 ~~~~~~~~~~~~d~l~~~~~-~~~tY~~~m~~n~~~i~~aL~  275 (279)
T d1xvla1         235 ATGARFGGNLYVDSLSTEEG-PVPTFLDLLEYDARVITNGLL  275 (279)
T ss_dssp             TTCCEEEEEECSSCCCCSSS-SCCSHHHHHHHHHHHHHTTSS
T ss_pred             HHCCCCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHC
T ss_conf             84997045222036888898-866799999999999999964


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: "Helical backbone" metal receptor
family: TroA-like
domain: Mn transporter MntC
species: Synechocystis sp. pcc 6803 [TaxId: 1148]