Query gi|254780717|ref|YP_003065130.1| zinc uptake ABC transporter [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 294
No_of_seqs 110 out of 2555
Neff 8.0
Searched_HMMs 13730
Date Wed Jun 1 08:04:06 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780717.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1pq4a_ c.92.2.2 (A:) Periplas 100.0 0 0 456.4 26.5 265 22-294 1-289 (289)
2 d1psza_ c.92.2.2 (A:) Pneumoco 100.0 0 0 449.8 23.9 276 18-294 4-285 (286)
3 d1xvla1 c.92.2.2 (A:49-327) Mn 100.0 0 0 441.8 27.6 268 19-294 2-275 (279)
4 d1toaa_ c.92.2.2 (A:) Periplas 100.0 0 0 442.3 23.1 266 22-294 1-276 (277)
5 d1m1na_ c.92.2.3 (A:) Nitrogen 83.8 1.3 9.4E-05 21.4 12.6 145 133-292 297-463 (477)
6 d2iw1a1 c.87.1.8 (A:2-371) Lip 83.0 1.1 7.7E-05 21.9 5.0 20 244-265 281-300 (370)
7 d2ihta1 c.31.1.3 (A:198-374) C 76.5 2.2 0.00016 19.9 5.9 123 19-157 17-161 (177)
8 d1m6ja_ c.1.1.1 (A:) Triosepho 67.5 3.6 0.00026 18.6 4.4 79 187-284 166-255 (260)
9 d2cc0a1 c.6.2.3 (A:1-192) Acet 64.5 3.6 0.00026 18.5 3.8 102 165-267 75-185 (192)
10 d2bfwa1 c.87.1.8 (A:218-413) G 62.7 4.4 0.00032 18.0 4.2 86 68-168 107-192 (196)
11 d1iuka_ c.2.1.8 (A:) Hypotheti 57.6 5.4 0.00039 17.4 3.9 44 220-263 79-122 (136)
12 d2btma_ c.1.1.1 (A:) Triosepho 52.0 6.7 0.00049 16.9 6.6 78 187-283 159-247 (251)
13 d2bisa1 c.87.1.8 (A:1-437) Gly 51.2 6.8 0.0005 16.8 7.2 19 34-52 23-41 (437)
14 d1mioa_ c.92.2.3 (A:) Nitrogen 50.5 7 0.00051 16.7 16.4 61 224-289 445-506 (525)
15 d2djia1 c.31.1.3 (A:187-363) P 49.1 7.4 0.00054 16.6 6.2 115 20-152 20-149 (177)
16 d2ji7a1 c.31.1.3 (A:195-369) O 46.8 8 0.00058 16.4 4.2 64 19-84 17-90 (175)
17 d1y81a1 c.2.1.8 (A:6-121) Hypo 46.6 8.1 0.00059 16.3 6.1 44 219-262 64-107 (116)
18 d1ybha1 c.31.1.3 (A:281-459) A 44.7 8.6 0.00063 16.1 6.3 73 31-105 35-116 (179)
19 d1u6ka1 c.127.1.1 (A:2-283) F4 44.2 8.8 0.00064 16.1 5.1 136 32-181 17-170 (282)
20 d2ez9a1 c.31.1.3 (A:183-365) P 44.0 8.8 0.00064 16.1 6.0 80 21-104 30-124 (183)
21 d1ytla1 c.31.1.6 (A:17-174) Ac 43.8 8.9 0.00065 16.1 5.0 37 67-103 87-125 (158)
22 d1kv5a_ c.1.1.1 (A:) Triosepho 38.7 11 0.00078 15.6 7.8 77 187-283 159-246 (249)
23 d1iv0a_ c.55.3.8 (A:) Hypothet 38.0 11 0.0008 15.5 3.7 29 219-247 69-97 (98)
24 d1trea_ c.1.1.1 (A:) Triosepho 37.2 11 0.00082 15.4 7.7 85 187-291 160-254 (255)
25 d2fdsa1 c.1.2.3 (A:1-324) Prot 33.2 2.2 0.00016 19.9 -1.4 40 140-179 87-129 (324)
26 d1xg7a_ a.96.1.6 (A:) Hypothet 30.8 12 0.00089 15.2 2.0 96 161-269 119-217 (245)
27 d2ctza1 c.67.1.3 (A:1-421) O-a 27.5 16 0.0012 14.4 5.5 129 151-294 271-421 (421)
28 d1n7ka_ c.1.10.1 (A:) Deoxyrib 26.9 17 0.0012 14.3 7.9 22 220-241 146-167 (234)
29 d1knxa1 c.98.2.1 (A:1-132) HPr 26.8 17 0.0012 14.3 4.1 48 217-264 65-113 (132)
30 d1nu0a_ c.55.3.8 (A:) Hypothet 26.2 17 0.0012 14.2 2.6 57 197-253 45-106 (138)
31 d1h6qa_ b.88.1.2 (A:) Translat 26.1 17 0.0013 14.2 4.2 36 137-172 87-122 (168)
32 d1duvg1 c.78.1.1 (G:1-150) Orn 25.3 18 0.0013 14.1 7.2 75 184-263 41-126 (150)
33 d1j6oa_ c.1.9.12 (A:) Hypothet 25.2 18 0.0013 14.1 7.1 15 46-60 32-46 (260)
34 d1vhxa_ c.55.3.8 (A:) Hypothet 23.4 19 0.0014 13.9 5.6 65 196-260 45-114 (140)
35 d2q02a1 c.1.15.4 (A:1-271) Put 23.1 20 0.0014 13.9 9.0 18 30-47 20-37 (271)
36 d1m5wa_ c.1.24.1 (A:) Pyridoxi 22.3 20 0.0015 13.8 8.7 43 221-266 112-155 (242)
37 d2hk6a1 c.92.1.1 (A:2-310) Fer 22.1 21 0.0015 13.8 6.1 138 128-287 143-304 (309)
38 d1n2za_ c.92.2.2 (A:) Vitamin 22.0 21 0.0015 13.7 4.2 229 23-290 2-242 (245)
39 d1x9ma1 c.55.3.5 (A:1-210) Exo 21.9 17 0.0013 14.2 1.5 27 68-94 48-76 (204)
40 d1o4va_ c.23.8.1 (A:) N5-CAIR 21.3 21 0.0016 13.6 6.5 31 72-104 55-85 (169)
41 d1ovma1 c.31.1.3 (A:181-341) I 20.7 22 0.0016 13.6 2.3 68 19-86 27-110 (161)
42 d1txja_ b.88.1.2 (A:) Translat 20.5 22 0.0016 13.6 4.2 37 136-172 89-125 (171)
No 1
>d1pq4a_ c.92.2.2 (A:) Periplasmic zinc binding protein ZnuA {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=100.00 E-value=0 Score=456.44 Aligned_cols=265 Identities=25% Similarity=0.399 Sum_probs=238.1
Q ss_pred CCEEEEEECHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCEE
Q ss_conf 88059997228999999970794417887058998353356802456650257899967661035689997314557679
Q gi|254780717|r 22 GSLQVVVSIKPIHSIVSCIMQGIGTPALLVKGASSPHEYSLRISEAMMLENADIIFWLGAEMESFLVKPLHSLNKQSNVV 101 (294)
Q Consensus 22 ~~~~Vv~s~~pl~~lv~~I~gd~~~V~~L~~~g~dpH~y~~tp~d~~~l~~Adlii~~G~~~E~~~~~~~~~~~~~~~~i 101 (294)
.+++||||++|+++||++|+||+++|++|+|+|.|||+|+|||+|+++|++||+|||||.+||.|+.+.+.+.+++..++
T Consensus 1 d~l~Vv~si~pl~~lv~~i~gd~~~V~~L~p~g~dPH~y~~~psd~~~l~~ADliv~~G~~lE~~~~~~~~~~~~~~~~v 80 (289)
T d1pq4a_ 1 DAMDITVSIPPQQYFLEKIGGDLVRVSVLVPGNNDPHTYEPKPQQLAALSEAEAYVLIGLGFEQPWLEKLKAANANMKLI 80 (289)
T ss_dssp CCEEEEESSHHHHHHHHHHHGGGEEEEESSCTTSCGGGCCCCHHHHHHGGGCSEEEECCTTTTTTTHHHHHHHCSSSEEE
T ss_pred CCCEEEEECHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCCCC
T ss_conf 99889997689999999983893479980698979835768999999996599999969632678999998745698741
Q ss_pred EEEECCCCCCCC------------------------CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
Q ss_conf 975135446210------------------------01211123321224756776555567899999999742186565
Q gi|254780717|r 102 TLSHSPDLHRIL------------------------LRDNHSHFHDSEADDLHLWLNPLNVQYIAHVIAMELIKKDPRNK 157 (294)
Q Consensus 102 ~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~dpH~Wl~p~n~~~~a~~I~~~L~~~dP~~~ 157 (294)
..+.+....... ..++++++|+++..|||+||||.|++.++++|+++|+++||+++
T Consensus 81 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DPH~Wldp~n~~~~a~~I~~~L~~~dP~~~ 160 (289)
T d1pq4a_ 81 DSAQGITPLEMEKHDHSHGEEEGHDDHSHDGHDHGSESEKEKAKGALMVADPHIWLSPTLVKRQATTIAKELAELDPDNR 160 (289)
T ss_dssp ETTTTCCCCBSCC----------------------------------CCBCCCGGGCHHHHHHHHHHHHHHHHHHCGGGH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 02366443110135665532466665544564455421211000133455512200430178999999999987504203
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 88998999986312223589998503002781462062157789874981200346775444978899999999754993
Q gi|254780717|r 158 IIYEKNEEEFKNQLSQLDKELHSILQPVEKKKIIVFHEAYRYFASHYNLSIVTFPMSHSVFMGAASLRNIRSKIISDKIS 237 (294)
Q Consensus 158 ~~y~~N~~~~~~~L~~l~~~~~~~~~~~~~~~~i~~H~a~~Yf~~~~gl~~~~~~~~~~~~~s~~~l~~~~~~ik~~~v~ 237 (294)
+.|++|+++|.++|.+|++++++++++++++.++++||+|+||+++|||++.++. .++.+||++++.++++.+|+++|+
T Consensus 161 ~~y~~N~~~~~~~L~~l~~~~~~~l~~~~~~~~v~~H~a~~Yf~~~ygl~~~~~~-~~~~eps~~~l~~l~~~ik~~~i~ 239 (289)
T d1pq4a_ 161 DQYEANLAAFLAELERLNQELGQILQPLPQRKFIVFHPSWAYFARDYNLVQIPIE-VEGQEPSAQELKQLIDTAKENNLT 239 (289)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCEEEESSCCCHHHHHHTTCEEEESC-BTTBCCCHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHCCCEEEEEE-CCCCCCCHHHHHHHHHHHHHCCCC
T ss_conf 4565518988765899989999872532478323325328779885485044421-368899989999999999974998
Q ss_pred EEEEECCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 899818889789999999719908998053367877816789999999999987419
Q gi|254780717|r 238 CLFYGPEFDSKIIRSITNDTGVMSAILDPEGMLIAEGPELYFQLMRSMSNSIAKNCS 294 (294)
Q Consensus 238 ~if~e~~~~~~~~~~ia~e~~~~~~~ld~~~~~~~~~~~~Y~~~m~~n~~~l~k~ls 294 (294)
|||+|+|++++.++.|++++|++++.+||+|. +|.++|+.|+++|++|+|
T Consensus 240 ~if~e~q~~~~~~~~la~~~gv~v~~ldpl~~-------~y~~~m~~n~~~i~~A~s 289 (289)
T d1pq4a_ 240 MVFGETQFSTKSSEAIAAEIGAGVELLDPLAA-------DWSSNLKAVAQKIANANS 289 (289)
T ss_dssp EEEEETTSCCHHHHHHHHHHTCEEEEECTTCS-------SHHHHHHHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHCCCCEEEECCCCC-------CHHHHHHHHHHHHHHHCC
T ss_conf 99973898939999999980998798788732-------599999999999998649
No 2
>d1psza_ c.92.2.2 (A:) Pneumococcal surface antigen PssA {Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]}
Probab=100.00 E-value=0 Score=449.77 Aligned_cols=276 Identities=24% Similarity=0.306 Sum_probs=236.2
Q ss_pred CCCCCCEEEEEECHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCC
Q ss_conf 13238805999722899999997079441788705899835335680245665025789996766103568999731455
Q gi|254780717|r 18 VARAGSLQVVVSIKPIHSIVSCIMQGIGTPALLVKGASSPHEYSLRISEAMMLENADIIFWLGAEMESFLVKPLHSLNKQ 97 (294)
Q Consensus 18 ~~~~~~~~Vv~s~~pl~~lv~~I~gd~~~V~~L~~~g~dpH~y~~tp~d~~~l~~Adlii~~G~~~E~~~~~~~~~~~~~ 97 (294)
.++.++++||||++|+++||++|+||+++|++|+|+|+|||+|+|+|+|+++|++||+|||||++||+|+.+++.....+
T Consensus 4 ~~~~~kl~VVat~~~l~~iv~~I~Gd~v~V~~L~p~g~dPH~yep~p~d~~~l~~ADliv~~G~~~E~~~~~~~~~~~~~ 83 (286)
T d1psza_ 4 TTSGQKLKVVATNSIIADITKNIAGDKIDLHSIVPIGQDPHEYEPLPEDVKKTSEADLIFYNGINLETGGNAWFTKLVEN 83 (286)
T ss_dssp GGGSCCEEEEEEEHHHHHHHHHHHGGGEEEEEEECTTSCSSSCCCCHHHHHHHHHCSEEEECCTTSTTHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEECHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 77899957999771999999998098259998069897985675899999999709999987988632577889988654
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 76799751354462100121112332122475677655556789999999974218656588998999986312223589
Q gi|254780717|r 98 SNVVTLSHSPDLHRILLRDNHSHFHDSEADDLHLWLNPLNVQYIAHVIAMELIKKDPRNKIIYEKNEEEFKNQLSQLDKE 177 (294)
Q Consensus 98 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~dpH~Wl~p~n~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~L~~l~~~ 177 (294)
...................+.+++++++..|||+|+||.|++.++++|+++|+++||++++.|++|+++|.++|+.++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dPH~Wldp~~~~~~a~~i~~~L~~~dP~~~~~y~~n~~~~~~~l~~l~~~ 163 (286)
T d1psza_ 84 AKKTENKDYFAVSDGVDVIYLEGQNEKGKEDPHAWLNLENGIIFAKNIAKQLSAKDPNNKEFYEKNLKEYTDKLDKLDKE 163 (286)
T ss_dssp TTCCBTTTEEETTTTSCCCBSTTCCSTTCBCCCGGGSHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred HCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 30256514898316631133456665555664435688889999999999998858012689999999987678888899
Q ss_pred HHHHCCC--CCCCEEEECCCHHHHHHHHCCCCEEC-CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHH
Q ss_conf 9985030--02781462062157789874981200-34677544497889999999975499389981888978999999
Q gi|254780717|r 178 LHSILQP--VEKKKIIVFHEAYRYFASHYNLSIVT-FPMSHSVFMGAASLRNIRSKIISDKISCLFYGPEFDSKIIRSIT 254 (294)
Q Consensus 178 ~~~~~~~--~~~~~~i~~H~a~~Yf~~~~gl~~~~-~~~~~~~~~s~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia 254 (294)
+++.+.. .++|.++++||+|+||+++|||++.+ .+.+++.+||++++.++++++|+++|+|||+|++++++.++.|+
T Consensus 164 ~~~~~~~~~~~~~~~i~~H~a~~Yf~~~ygl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~la 243 (286)
T d1psza_ 164 SKDKFNKIPAEKKLIVTSEGAFKYFSKAYGVPSAYIWEINTEEEGTPEQIKTLVEKLRQTKVPSLFVESSVDDRPMKTVS 243 (286)
T ss_dssp HTTTTTTSCTTTCCEEEEECCCHHHHHHHTCCEEEEESSTTSCSSCHHHHHHHHHHHHTSCCCCEEEETTSCSHHHHHHH
T ss_pred HHHHHHHHCCCCEEEEEECCHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHH
T ss_conf 99987652145359997444036677744874201021056334571689999999883782599990888929999999
Q ss_pred HHHCCCEEE---ECCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 971990899---8053367877816789999999999987419
Q gi|254780717|r 255 NDTGVMSAI---LDPEGMLIAEGPELYFQLMRSMSNSIAKNCS 294 (294)
Q Consensus 255 ~e~~~~~~~---ld~~~~~~~~~~~~Y~~~m~~n~~~l~k~ls 294 (294)
+++|++++. +|+++...+.+ ++|++||+.|+++|+++||
T Consensus 244 ~~~gv~v~~~~~~d~l~~~~~~~-~~Y~~~m~~n~~~l~~aL~ 285 (286)
T d1psza_ 244 QDTNIPIYAQIFTDSIAEQGKEG-DSYYSMMKYNLDKIAEGLA 285 (286)
T ss_dssp HHHTCCEEEEECSSSCCCTTSTT-CSHHHHHHHHHHHHHHHHT
T ss_pred HHCCCCEEEECCCCCCCCCCCCC-CCHHHHHHHHHHHHHHHHC
T ss_conf 97399678641565667789875-7799999999999999867
No 3
>d1xvla1 c.92.2.2 (A:49-327) Mn transporter MntC {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=100.00 E-value=0 Score=441.83 Aligned_cols=268 Identities=15% Similarity=0.279 Sum_probs=237.7
Q ss_pred CCCCCEEEEEECHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCC
Q ss_conf 32388059997228999999970794417887058998353356802456650257899967661035689997314557
Q gi|254780717|r 19 ARAGSLQVVVSIKPIHSIVSCIMQGIGTPALLVKGASSPHEYSLRISEAMMLENADIIFWLGAEMESFLVKPLHSLNKQS 98 (294)
Q Consensus 19 ~~~~~~~Vv~s~~pl~~lv~~I~gd~~~V~~L~~~g~dpH~y~~tp~d~~~l~~Adlii~~G~~~E~~~~~~~~~~~~~~ 98 (294)
.+.++++||||+.||+++|++|+||+++|++|+|+|+|||+|+|+|+|++++++||+|||||.+||+|+.+++.+....
T Consensus 2 ~~~~k~~Vvas~~~l~~iv~~I~Gd~~~V~~l~p~~~dPH~y~~~p~d~~~l~~ADliv~~G~~lE~~l~~~~~~~~~~- 80 (279)
T d1xvla1 2 ETEEKKKVLTTFTVLADMVQNVAGDKLVVESITRIGAEIHGYEPTPSDIVKAQDADLILYNGMNLERWFEQFLGNVKDV- 80 (279)
T ss_dssp CCCCCCEEEESSHHHHHHHHHHHTTTSEEEESSCSSCCCSSCCCCHHHHHHHHTCSEEEECCTTSSTTHHHHHHTSSSC-
T ss_pred CCCCCCEEEEECHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCEEEECCCCCCHHHHHHHHHCCCC-
T ss_conf 9888867999876999999998188448998069897964576899999999739999997998518899987641355-
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 67997513544621001211123321224756776555567899999999742186565889989999863122235899
Q gi|254780717|r 99 NVVTLSHSPDLHRILLRDNHSHFHDSEADDLHLWLNPLNVQYIAHVIAMELIKKDPRNKIIYEKNEEEFKNQLSQLDKEL 178 (294)
Q Consensus 99 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~dpH~Wl~p~n~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~L~~l~~~~ 178 (294)
.++.+...... .+..++|+++..|||+||||.|++.++++|+++|+++||++++.|++|+++|.++|+++++++
T Consensus 81 ~~~~~~~~~~~------~~~~~~~~~~~~dpH~Wldp~~~~~~a~~Ia~~L~~~dP~~~~~y~~n~~~~~~~l~~l~~~~ 154 (279)
T d1xvla1 81 PSVVLTEGIEP------IPIADGPYTDKPNPHAWMSPRNALVYVENIRQAFVELDPDNAKYYNANAAVYSEQLKAIDRQL 154 (279)
T ss_dssp CEEETTTTCCC------CBCCSSSSTTSBCCCGGGSHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEECCCCCC------CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 42111035456------554455554567742111768899999999999987585544679998997740056657999
Q ss_pred HHHCC--CCCCCEEEECCCHHHHHHHHCCCCEEC-CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHH
Q ss_conf 98503--002781462062157789874981200-346775444978899999999754993899818889789999999
Q gi|254780717|r 179 HSILQ--PVEKKKIIVFHEAYRYFASHYNLSIVT-FPMSHSVFMGAASLRNIRSKIISDKISCLFYGPEFDSKIIRSITN 255 (294)
Q Consensus 179 ~~~~~--~~~~~~~i~~H~a~~Yf~~~~gl~~~~-~~~~~~~~~s~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~ 255 (294)
++.++ |.+++.++++|++|+||+++|||++.+ +..+++.+||++++.++++.+|+++++|||+|++++++.++.|++
T Consensus 155 ~~~l~~~~~~~~~~v~~H~a~~Yf~~~~gl~~~~~~~~~~~~~ps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~ia~ 234 (279)
T d1xvla1 155 GADLEQVPANQRFLVSCEGAFSYLARDYGMEEIYMWPINAEQQFTPKQVQTVIEEVKTNNVPTIFCESTVSDKGQKQVAQ 234 (279)
T ss_dssp HHHHTTSCGGGCEEEEEESTTHHHHHHTTCEEEEEESSSSSCSCCHHHHHHHHHHHHTTTCSEEEEETTSCSHHHHHHHT
T ss_pred HHHHHHCCCCCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHH
T ss_conf 99996188655289995453013566369626630256885668988999999998754861898247788299999999
Q ss_pred HHCCCEEE---ECCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 71990899---8053367877816789999999999987419
Q gi|254780717|r 256 DTGVMSAI---LDPEGMLIAEGPELYFQLMRSMSNSIAKNCS 294 (294)
Q Consensus 256 e~~~~~~~---ld~~~~~~~~~~~~Y~~~m~~n~~~l~k~ls 294 (294)
+++++++. +|+++.... ..++|++||+.|+++|.++|.
T Consensus 235 ~~~~~~~~~~~~d~l~~~~~-~~~tY~~~m~~n~~~i~~aL~ 275 (279)
T d1xvla1 235 ATGARFGGNLYVDSLSTEEG-PVPTFLDLLEYDARVITNGLL 275 (279)
T ss_dssp TTCCEEEEEECSSCCCCSSS-SCCSHHHHHHHHHHHHHTTSS
T ss_pred HHCCCCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHC
T ss_conf 84997045222036888898-866799999999999999964
No 4
>d1toaa_ c.92.2.2 (A:) Periplasmic zinc binding protein TroA {Treponema pallidum [TaxId: 160]}
Probab=100.00 E-value=0 Score=442.28 Aligned_cols=266 Identities=20% Similarity=0.290 Sum_probs=235.2
Q ss_pred CCEEEEEECHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCEE
Q ss_conf 88059997228999999970794417887058998353356802456650257899967661035689997314557679
Q gi|254780717|r 22 GSLQVVVSIKPIHSIVSCIMQGIGTPALLVKGASSPHEYSLRISEAMMLENADIIFWLGAEMESFLVKPLHSLNKQSNVV 101 (294)
Q Consensus 22 ~~~~Vv~s~~pl~~lv~~I~gd~~~V~~L~~~g~dpH~y~~tp~d~~~l~~Adlii~~G~~~E~~~~~~~~~~~~~~~~i 101 (294)
|+++||||++|++++|++|+||+++|++|+|+|+|||+|+|+|+|+++|++||+|||+|.+||+|+.+++.+..++..++
T Consensus 1 gkp~Vv~t~~pl~~~v~~I~gd~v~V~~lip~~~dPH~ye~~p~d~~~l~~ADliv~~G~~lE~~~~~~~~~~~~~~~v~ 80 (277)
T d1toaa_ 1 GKPLVVTTIGMIADAVKNIAQGDVHLKGLMGPGVDPHLYTATAGDVEWLGNADLILYNGLHLETKMGEVFSKLRGSRLVV 80 (277)
T ss_dssp CCCEEEESSHHHHHHHHHHHGGGSEEEESCCTTCCTTTCCCCHHHHHHHHHCSEEEECCTTCSTTCHHHHHHHTTSSEEE
T ss_pred CCCEEEEECHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCCEEE
T ss_conf 99899998879999999982994589980697979827768999999995699999989986613589998647887155
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 97513544621001211123321224756776555567899999999742186565889989999863122235899985
Q gi|254780717|r 102 TLSHSPDLHRILLRDNHSHFHDSEADDLHLWLNPLNVQYIAHVIAMELIKKDPRNKIIYEKNEEEFKNQLSQLDKELHSI 181 (294)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~dpH~Wl~p~n~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~L~~l~~~~~~~ 181 (294)
....... ....++|+++..|||+|+||.|++.++++|+++|+++||+|++.|++|+++|.++|++|++++++.
T Consensus 81 ~~~~~~~-------~~~~~~~~~~~~dPH~Wldp~~~~~~a~~I~~~L~~~dP~~~~~y~~n~~~~~~~L~~l~~~~~~~ 153 (277)
T d1toaa_ 81 AVSETIP-------VSQRLSLEEAEFDPHVWFDVKLWSYSVKAVYESLCKLLPGKTREFTQRYQAYQQQLDKLDAYVRRK 153 (277)
T ss_dssp EGGGGSC-------GGGSCBSTTSCBCCCGGGSHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ECCCCCC-------CCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 2044444-------210135453335641440741589999999999998746667899999999999999987899999
Q ss_pred CC--CCCCCEEEECCCHHHHHHHHCCCCEEC-CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHC
Q ss_conf 03--002781462062157789874981200-346775444978899999999754993899818889789999999719
Q gi|254780717|r 182 LQ--PVEKKKIIVFHEAYRYFASHYNLSIVT-FPMSHSVFMGAASLRNIRSKIISDKISCLFYGPEFDSKIIRSITNDTG 258 (294)
Q Consensus 182 ~~--~~~~~~~i~~H~a~~Yf~~~~gl~~~~-~~~~~~~~~s~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~ 258 (294)
+. |..+|.++++||+|+||+++|||++.+ ++.+++.+||++++.++++.+|+++++|||+|++++++.++.|+++++
T Consensus 154 ~~~~~~~~~~~v~~H~a~~Yf~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~ia~~~~ 233 (277)
T d1toaa_ 154 AQSLPAERRVLVTAHDAFGYFSRAYGFEVKGLQGVSTASEASAHDMQELAAFIAQRKLPAIFIESSIPHKNVEALRDAVQ 233 (277)
T ss_dssp HHTSCGGGCEEEEEESCCHHHHHHHTCEEEEEECSSCSSCCCHHHHHHHHHHHHHTTCSEEEEETTSCTHHHHHHHHHHH
T ss_pred HHHHCCCCEEEEEECCCHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHC
T ss_conf 87501464389994551255787348640111233442134147999999999851770899547788189999999857
Q ss_pred CCEEEECC------CCCCC-CCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 90899805------33678-77816789999999999987419
Q gi|254780717|r 259 VMSAILDP------EGMLI-AEGPELYFQLMRSMSNSIAKNCS 294 (294)
Q Consensus 259 ~~~~~ld~------~~~~~-~~~~~~Y~~~m~~n~~~l~k~ls 294 (294)
+++..+++ .+... ..+..+|++||++|+++|.++||
T Consensus 234 ~k~~~~~~~~~l~~d~l~~~~~~~~tY~~~m~~N~~~i~~aL~ 276 (277)
T d1toaa_ 234 ARGHVVQIGGELFSDAMGDAGTSEGTYVGMVTHNIDTIVAALA 276 (277)
T ss_dssp TTTCCCEEEEEECSSSCCCTTSGGGSHHHHHHHHHHHHHHHHC
T ss_pred CCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 8841334477235444567788836599999999999999867
No 5
>d1m1na_ c.92.2.3 (A:) Nitrogenase iron-molybdenum protein, alpha chain {Azotobacter vinelandii [TaxId: 354]}
Probab=83.78 E-value=1.3 Score=21.39 Aligned_cols=145 Identities=9% Similarity=0.016 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCC-----HHHHHHHHCCC
Q ss_conf 6555567899999999742186565-88998999986312223589998503002781462062-----15778987498
Q gi|254780717|r 133 LNPLNVQYIAHVIAMELIKKDPRNK-IIYEKNEEEFKNQLSQLDKELHSILQPVEKKKIIVFHE-----AYRYFASHYNL 206 (294)
Q Consensus 133 l~p~n~~~~a~~I~~~L~~~dP~~~-~~y~~N~~~~~~~L~~l~~~~~~~~~~~~~~~~i~~H~-----a~~Yf~~~~gl 206 (294)
+.+.+...+...|++.|.+-.|+.. +.+.+ ..+++...-.+++.. +.++.++++-+ ++.-|.+++|+
T Consensus 297 ~G~~~T~~~Lr~ia~~~g~~i~~~~e~~i~~----e~~~~~~~l~~~r~~---l~Gkrv~i~~~~~~~~~l~~~l~elGm 369 (477)
T d1m1na_ 297 FGPTKTIESLRAIAAKFDESIQKKCEEVIAK----YKPEWEAVVAKYRPR---LEGKRVMLYIGGLRPRHVIGAYEDLGM 369 (477)
T ss_dssp SSHHHHHHHHHHHHTTSCHHHHHHHHHHHHH----HHHHHHHHHHHHHHH---HTTCEEEECBSSSHHHHTHHHHHTTTC
T ss_pred CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH----HHHHHHHHHHHHHHH---HCCCCEEEECCCHHHHHHHHHHHHCCC
T ss_conf 7505799999999998489730568999998----999999999999876---248827996684348999999998799
Q ss_pred CEECCCCCCCC---------CC-------CHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCEEEECCCCCC
Q ss_conf 12003467754---------44-------978899999999754993899818889789999999719908998053367
Q gi|254780717|r 207 SIVTFPMSHSV---------FM-------GAASLRNIRSKIISDKISCLFYGPEFDSKIIRSITNDTGVMSAILDPEGML 270 (294)
Q Consensus 207 ~~~~~~~~~~~---------~~-------s~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~~~~~ld~~~~~ 270 (294)
++..+...... .. .-.+..++.+.+++.+...++... .-+.++++.|++.+.+......
T Consensus 370 evv~~~~~~~~~~d~~~~~~~~~~~~~i~~d~~~~el~~~i~~~~pDL~ig~~-----~~k~~a~k~gIP~~~~~~~dr~ 444 (477)
T d1m1na_ 370 EVVGTGYEFAHNDDYDRTMKEMGDSTLLYDDVTGYEFEEFVKRIKPDLIGSGI-----KEKFIFQKMGIPFREMHSWDYS 444 (477)
T ss_dssp EEEEEEESSCCHHHHHTTTTTSCTTCEEEESCBHHHHHHHHHHHCCSEEEECH-----HHHHHHHHTTCCEEESSSGGGC
T ss_pred EEEEEEECCCCHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHCCCCEEEECC-----HHHHHHHHCCCCCCCCCCCCCC
T ss_conf 78898615777678999998669886895689999999999865999999785-----0589999819996217753458
Q ss_pred CCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 8778167899999999999874
Q gi|254780717|r 271 IAEGPELYFQLMRSMSNSIAKN 292 (294)
Q Consensus 271 ~~~~~~~Y~~~m~~n~~~l~k~ 292 (294)
.+. -+|.-++. .++.+..+
T Consensus 445 gp~--~GY~G~~~-la~~i~~a 463 (477)
T d1m1na_ 445 GPY--HGFDGFAI-FARDMDMT 463 (477)
T ss_dssp CCC--SHHHHHHH-HHHHHHHH
T ss_pred CCC--CCHHHHHH-HHHHHHHH
T ss_conf 887--71888999-99999999
No 6
>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]}
Probab=82.95 E-value=1.1 Score=21.92 Aligned_cols=20 Identities=15% Similarity=0.155 Sum_probs=11.7
Q ss_pred CCCHHHHHHHHHHHCCCEEEEC
Q ss_conf 8897899999997199089980
Q gi|254780717|r 244 EFDSKIIRSITNDTGVMSAILD 265 (294)
Q Consensus 244 ~~~~~~~~~ia~e~~~~~~~ld 265 (294)
.++-..+|.++- |.+++.-|
T Consensus 281 ~~~~~~~EAma~--G~PvI~s~ 300 (370)
T d2iw1a1 281 AAGIVLLEAITA--GLPVLTTA 300 (370)
T ss_dssp SSCHHHHHHHHH--TCCEEEET
T ss_pred CCCCEEEECCCC--CEEEEEEC
T ss_conf 433113321457--70399938
No 7
>d2ihta1 c.31.1.3 (A:198-374) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]}
Probab=76.47 E-value=2.2 Score=19.87 Aligned_cols=123 Identities=11% Similarity=0.106 Sum_probs=60.7
Q ss_pred CCCCCEEEEEECH--------HHHHHHHHHHCCCCEEEEEECCC----CCCCCCC----------CCHHHHHHHCCCCEE
Q ss_conf 3238805999722--------89999999707944178870589----9835335----------680245665025789
Q gi|254780717|r 19 ARAGSLQVVVSIK--------PIHSIVSCIMQGIGTPALLVKGA----SSPHEYS----------LRISEAMMLENADII 76 (294)
Q Consensus 19 ~~~~~~~Vv~s~~--------pl~~lv~~I~gd~~~V~~L~~~g----~dpH~y~----------~tp~d~~~l~~Adli 76 (294)
.++.+|-|++--. -+..|++..+-.. +++....| .+|+.+- -++.-.+.+++||++
T Consensus 17 ~~AkrPvii~G~g~~~~~a~~~l~~lae~~~iPv--~~t~~~kg~~p~~hp~~~G~~~~~~~G~~~~~~~~~~l~~aDlv 94 (177)
T d2ihta1 17 AEAKHPVLVVGAAAIRSGAVPAIRALAERLNIPV--ITTYIAKGVLPVGHELNYGAVTGYMDGILNFPALQTMFAPVDLV 94 (177)
T ss_dssp HHCSSEEEEECHHHHHTTCHHHHHHHHHHHTCCE--EECSTTTTSSCTTCTTEEEECCTTHHHHHTSCHHHHHHTTCCEE
T ss_pred HHCCCEEEEECCCCCHHHHHHHHHHHHHCCEEEE--EECCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCE
T ss_conf 8079979999968253426999999753155899--96054465899865334230000223221238999876067745
Q ss_pred EEECCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 99676610356899973145576799751354462100121112332122475677655556789999999974218656
Q gi|254780717|r 77 FWLGAEMESFLVKPLHSLNKQSNVVTLSHSPDLHRILLRDNHSHFHDSEADDLHLWLNPLNVQYIAHVIAMELIKKDPRN 156 (294)
Q Consensus 77 i~~G~~~E~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~dpH~Wl~p~n~~~~a~~I~~~L~~~dP~~ 156 (294)
+..|..+..+..........+.++|-+...+.. + .. +...|--++-|+ ....+.+.+.+....+..
T Consensus 95 l~vG~~~~~~~~~~~~~~~~~~k~I~Id~d~~~--i--~~-------~~~~~~~i~gD~---~~~l~~L~~~l~~~~~~~ 160 (177)
T d2ihta1 95 LTVGYDYAEDLRPSMWQKGIEKKTVRISPTVNP--I--PR-------VYRPDVDVVTDV---LAFVEHFETATASFGAKQ 160 (177)
T ss_dssp EEETCCGGGCCCHHHHCCSSCCEEEEEESSCCS--C--TT-------TCCCSEEEESCH---HHHHHHHHHHTTTCCCCC
T ss_pred EEECCCCCCCCCCCCCCCCCCCCEEEECCCHHH--H--CC-------CCCCCEEEEECH---HHHHHHHHHHHHHCCCCC
T ss_conf 786245455432354445776530487078789--2--88-------557874798589---999999999766366557
Q ss_pred H
Q ss_conf 5
Q gi|254780717|r 157 K 157 (294)
Q Consensus 157 ~ 157 (294)
+
T Consensus 161 ~ 161 (177)
T d2ihta1 161 R 161 (177)
T ss_dssp C
T ss_pred H
T ss_conf 8
No 8
>d1m6ja_ c.1.1.1 (A:) Triosephosphate isomerase {Entamoeba histolytica [TaxId: 5759]}
Probab=67.50 E-value=3.6 Score=18.56 Aligned_cols=79 Identities=8% Similarity=0.177 Sum_probs=52.4
Q ss_pred CCEEEECCCHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHH-----------CCCCEEEEECCCCHHHHHHHHH
Q ss_conf 78146206215778987498120034677544497889999999975-----------4993899818889789999999
Q gi|254780717|r 187 KKKIIVFHEAYRYFASHYNLSIVTFPMSHSVFMGAASLRNIRSKIIS-----------DKISCLFYGPEFDSKIIRSITN 255 (294)
Q Consensus 187 ~~~~i~~H~a~~Yf~~~~gl~~~~~~~~~~~~~s~~~l~~~~~~ik~-----------~~v~~if~e~~~~~~~~~~ia~ 255 (294)
++-++.|+|.|. +.++..|++.++.++...||+ .+++. ++.-..++..+..|.+
T Consensus 166 ~~iiIAYEPvWA--------------IGTG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~~v~i-lYGGSV~~~N~~~i~~ 230 (260)
T d1m6ja_ 166 KNIILAYEPVWA--------------IGTGKTATPDQAQEVHQYIRKWMTENISKEVAEATRI-QYGGSVNPANCNELAK 230 (260)
T ss_dssp GGEEEEECCGGG--------------SSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSCE-EECSCCCTTTHHHHHT
T ss_pred HCCEEECCCEEC--------------CCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCE-EECCCCCHHHHHHHHC
T ss_conf 150775163311--------------4688656817777777888889886405323477748-9718988759999847
Q ss_pred HHCCCEEEECCCCCCCCCCCCCHHHHHHH
Q ss_conf 71990899805336787781678999999
Q gi|254780717|r 256 DTGVMSAILDPEGMLIAEGPELYFQLMRS 284 (294)
Q Consensus 256 e~~~~~~~ld~~~~~~~~~~~~Y~~~m~~ 284 (294)
.-++..+.+-- ...+++++.++.+.
T Consensus 231 ~~~vDG~LVGg----ASL~~~~F~~Ii~~ 255 (260)
T d1m6ja_ 231 KADIDGFLVGG----ASLDAAKFKTIINS 255 (260)
T ss_dssp STTCCEEEESG----GGGSHHHHHHHHGG
T ss_pred CCCCCEEEECH----HHCCHHHHHHHHHH
T ss_conf 78998588415----75588999999999
No 9
>d2cc0a1 c.6.2.3 (A:1-192) Acetyl-xylan esterase {Streptomyces lividans [TaxId: 1916]}
Probab=64.54 E-value=3.6 Score=18.54 Aligned_cols=102 Identities=12% Similarity=0.158 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHHHHCCCC---CCCEEEECCCHHHHHHHHCCCCEECCCCCC-C-CCCCHHHHHHHHHHHHHCCCCEE
Q ss_conf 998631222358999850300---278146206215778987498120034677-5-44497889999999975499389
Q gi|254780717|r 165 EEFKNQLSQLDKELHSILQPV---EKKKIIVFHEAYRYFASHYNLSIVTFPMSH-S-VFMGAASLRNIRSKIISDKISCL 239 (294)
Q Consensus 165 ~~~~~~L~~l~~~~~~~~~~~---~~~~~i~~H~a~~Yf~~~~gl~~~~~~~~~-~-~~~s~~~l~~~~~~ik~~~v~~i 239 (294)
+++.+++..-...+++..... =+-++-.+.+...-+++++|++.+.+...+ + ..+++..+.+.++.++...| .+
T Consensus 75 ~~~~~ei~~~~~~i~~~~g~~~~~fR~P~g~~~~~~~~~l~~~G~~~v~w~vd~~Dw~~~~~~~i~~~v~~~~~G~I-iL 153 (192)
T d2cc0a1 75 AQMDSEISRTQQAIAGAGGGTPKLFRPPYGETNATLRSVEAKYGLTEVIWDVDSQDWNNASTDAIVQAVSRLGNGQV-IL 153 (192)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCCSEECCGGGCCCHHHHHHHHHTTCEECCCSEECCGGGTCCHHHHHHHHHTCCTTCE-EE
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEE-EE
T ss_conf 88999999999999997688753403863654255789999759845428998565666899999999726589969-99
Q ss_pred EEECCC-CHHHHHHH---HHHHCCCEEEECCC
Q ss_conf 981888-97899999---99719908998053
Q gi|254780717|r 240 FYGPEF-DSKIIRSI---TNDTGVMSAILDPE 267 (294)
Q Consensus 240 f~e~~~-~~~~~~~i---a~e~~~~~~~ld~~ 267 (294)
+.+... ....+..| .++-|.+.++|+++
T Consensus 154 ~Hd~~~~t~~aL~~ii~~lk~~Gy~fvtlse~ 185 (192)
T d2cc0a1 154 MHDWPANTLAAIPRIAQTLAGKGLCSGMISPQ 185 (192)
T ss_dssp EESSCHHHHHHHHHHHHHHHHTTEEECEECTT
T ss_pred EECCCHHHHHHHHHHHHHHHHCCCEEEECCCC
T ss_conf 71895209999999999999889989972667
No 10
>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}
Probab=62.69 E-value=4.4 Score=17.99 Aligned_cols=86 Identities=13% Similarity=0.132 Sum_probs=40.1
Q ss_pred HHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 66502578999676610356899973145576799751354462100121112332122475677655556789999999
Q gi|254780717|r 68 MMLENADIIFWLGAEMESFLVKPLHSLNKQSNVVTLSHSPDLHRILLRDNHSHFHDSEADDLHLWLNPLNVQYIAHVIAM 147 (294)
Q Consensus 68 ~~l~~Adlii~~G~~~E~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~dpH~Wl~p~n~~~~a~~I~~ 147 (294)
.-++.||+++.-. -.|++-..+++.+.-...++. ++......+. . + +-.+|.+|.+...+++.|.+
T Consensus 107 ~~~~~~di~v~ps-~~e~~~~~~~Eam~~G~pvI~-~~~~~~~e~i-~---------~--~~g~~~~~~~~~~l~~~i~~ 172 (196)
T d2bfwa1 107 ELYGSVDFVIIPS-YFEPFGLVALEAMCLGAIPIA-SAVGGLRDII-T---------N--ETGILVKAGDPGELANAILK 172 (196)
T ss_dssp HHHTTCSEEEECC-SCCSSCHHHHHHHHTTCEEEE-ESCHHHHHHC-C---------T--TTCEEECTTCHHHHHHHHHH
T ss_pred HCCCCCCCCCCCC-CCCCCCCCCHHHHHCCCEEEE-CCCCCCCEEE-C---------C--CCEEEECCCCHHHHHHHHHH
T ss_conf 0012323344322-211233220133314860465-1788532010-2---------8--73146789999999999999
Q ss_pred HHHHCCCCCHHHHHHHHHHHH
Q ss_conf 974218656588998999986
Q gi|254780717|r 148 ELIKKDPRNKIIYEKNEEEFK 168 (294)
Q Consensus 148 ~L~~~dP~~~~~y~~N~~~~~ 168 (294)
.|. .+++..+.+.+|+.+..
T Consensus 173 ~l~-~~~~~~~~~~~~a~~~a 192 (196)
T d2bfwa1 173 ALE-LSRSDLSKFRENCKKRA 192 (196)
T ss_dssp HHH-CCHHHHHHHHHHHHHHH
T ss_pred HHH-CCHHHHHHHHHHHHHHH
T ss_conf 995-79999999999999999
No 11
>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}
Probab=57.61 E-value=5.4 Score=17.43 Aligned_cols=44 Identities=5% Similarity=0.115 Sum_probs=37.4
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCEEE
Q ss_conf 97889999999975499389981888978999999971990899
Q gi|254780717|r 220 GAASLRNIRSKIISDKISCLFYGPEFDSKIIRSITNDTGVMSAI 263 (294)
Q Consensus 220 s~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~~~~~ 263 (294)
.+..+..+.+...+.++++++.+++.....+..++++.|++++.
T Consensus 79 p~~~v~~~v~~~~~~g~k~i~~q~G~~~~e~~~~a~~~Gi~vV~ 122 (136)
T d1iuka_ 79 PPSALMDHLPEVLALRPGLVWLQSGIRHPEFEKALKEAGIPVVA 122 (136)
T ss_dssp CHHHHTTTHHHHHHHCCSCEEECTTCCCHHHHHHHHHTTCCEEE
T ss_pred CHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCEEEC
T ss_conf 47889999999985178859985585589999999995997993
No 12
>d2btma_ c.1.1.1 (A:) Triosephosphate isomerase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=51.97 E-value=6.7 Score=16.86 Aligned_cols=78 Identities=18% Similarity=0.313 Sum_probs=51.1
Q ss_pred CCEEEECCCHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHH-----------CCCCEEEEECCCCHHHHHHHHH
Q ss_conf 78146206215778987498120034677544497889999999975-----------4993899818889789999999
Q gi|254780717|r 187 KKKIIVFHEAYRYFASHYNLSIVTFPMSHSVFMGAASLRNIRSKIIS-----------DKISCLFYGPEFDSKIIRSITN 255 (294)
Q Consensus 187 ~~~~i~~H~a~~Yf~~~~gl~~~~~~~~~~~~~s~~~l~~~~~~ik~-----------~~v~~if~e~~~~~~~~~~ia~ 255 (294)
++-++.|+|.|. +.++..|++.++.++...||+ .+++. ++.-..++..+..|.+
T Consensus 159 ~~iiIAYEPvWA--------------IGTG~~a~~~~i~e~~~~Ir~~l~~~~~~~~~~~i~i-lYGGSV~~~N~~~i~~ 223 (251)
T d2btma_ 159 KQAVIAYEPIWA--------------IGTGKSSTPEDANSVCGHIRSVVSRLFGPEAAEAIRI-QYGGSVKPDNIRDFLA 223 (251)
T ss_dssp TTCEEEECCGGG--------------TTTSCCCCHHHHHHHHHHHHHHHHHHHCHHHHTTSEE-EEESSCCTTTHHHHHT
T ss_pred CEEEEEECCCCC--------------CCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCE-EEECCCCHHHHHHHHC
T ss_conf 328998663012--------------4556678826666668999999986406334165858-8508979869999966
Q ss_pred HHCCCEEEECCCCCCCCCCCCCHHHHHH
Q ss_conf 7199089980533678778167899999
Q gi|254780717|r 256 DTGVMSAILDPEGMLIAEGPELYFQLMR 283 (294)
Q Consensus 256 e~~~~~~~ld~~~~~~~~~~~~Y~~~m~ 283 (294)
.-++..+.+ |. ....++.|.++++
T Consensus 224 ~~~vDG~LV---G~-ASl~~~~F~~Ii~ 247 (251)
T d2btma_ 224 QQQIDGALV---GG-ASLEPASFLQLVE 247 (251)
T ss_dssp STTCCEEEE---SG-GGSSHHHHHHHHH
T ss_pred CCCCCEEEE---CH-HHCCHHHHHHHHH
T ss_conf 889997995---35-7679899999999
No 13
>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}
Probab=51.22 E-value=6.8 Score=16.78 Aligned_cols=19 Identities=5% Similarity=-0.057 Sum_probs=8.7
Q ss_pred HHHHHHHHCCCCEEEEEEC
Q ss_conf 9999997079441788705
Q gi|254780717|r 34 HSIVSCIMQGIGTPALLVK 52 (294)
Q Consensus 34 ~~lv~~I~gd~~~V~~L~~ 52 (294)
+.+++.+..--.+|+.+.|
T Consensus 23 ~~La~~L~~~Gh~V~Vvtp 41 (437)
T d2bisa1 23 TAISEALASLGHEVLVFTP 41 (437)
T ss_dssp HHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHCCCEEEEEEC
T ss_conf 9999999976998999905
No 14
>d1mioa_ c.92.2.3 (A:) Nitrogenase iron-molybdenum protein, alpha chain {Clostridium pasteurianum [TaxId: 1501]}
Probab=50.54 E-value=7 Score=16.72 Aligned_cols=61 Identities=16% Similarity=0.119 Sum_probs=36.2
Q ss_pred HHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCEEEECCCCCCCC-CCCCCHHHHHHHHHHHH
Q ss_conf 9999999975499389981888978999999971990899805336787-78167899999999999
Q gi|254780717|r 224 LRNIRSKIISDKISCLFYGPEFDSKIIRSITNDTGVMSAILDPEGMLIA-EGPELYFQLMRSMSNSI 289 (294)
Q Consensus 224 l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~~~~~ld~~~~~~~-~~~~~Y~~~m~~n~~~l 289 (294)
..++.+.+++.++..++..+ .-+.++++.|++.+.+.......+ -|.++-+.+.+...++|
T Consensus 445 ~~el~~~i~~~~pDLiig~~-----~ek~~a~klgiP~~~~~~~dr~gpy~GY~G~~~fa~~i~~~l 506 (525)
T d1mioa_ 445 HHDMEVVLEKLKPDMFFAGI-----KEKFVIQKGGVLSKQLHSYDYNGPYAGFRGVVNFGHELVNGI 506 (525)
T ss_dssp HHHHHHHHHHHCCSEEEECH-----HHHHHHHHTTCEEEETTTTTSCCCCSSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEECC-----CHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 89999999764999999677-----306989982998741783446888646788999999999987
No 15
>d2djia1 c.31.1.3 (A:187-363) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]}
Probab=49.15 E-value=7.4 Score=16.58 Aligned_cols=115 Identities=10% Similarity=0.041 Sum_probs=54.7
Q ss_pred CCCCEEEEEEC------HHHHHHHHHHHCCCCEEEEEECCC----CCCCCC-----CCCHHHHHHHCCCCEEEEECCCCC
Q ss_conf 23880599972------289999999707944178870589----983533-----568024566502578999676610
Q gi|254780717|r 20 RAGSLQVVVSI------KPIHSIVSCIMQGIGTPALLVKGA----SSPHEY-----SLRISEAMMLENADIIFWLGAEME 84 (294)
Q Consensus 20 ~~~~~~Vv~s~------~pl~~lv~~I~gd~~~V~~L~~~g----~dpH~y-----~~tp~d~~~l~~Adlii~~G~~~E 84 (294)
.+.++-|++-- .-+..|++.++-.. ++++...| .+|+.. ..++...+.+++||++|.+|..+.
T Consensus 20 ~Ak~Pvii~G~g~~~a~~~l~~lae~l~~Pv--~~t~~~~g~ip~~hp~~~G~~g~~~~~~~~~~l~~aDlvi~lG~~~~ 97 (177)
T d2djia1 20 NSKRPVIYAGIGTMGHGPAVQELARKIKAPV--ITTGKNFETFEWDFEALTGSTYRVGWKPANETILEADTVLFAGSNFP 97 (177)
T ss_dssp TCSSEEEEECGGGTTCHHHHHHHHHHHTCCE--EECTTCGGGSCTTCTTBCCCSSSSSCHHHHHHHHHCSEEEEESCCCT
T ss_pred HCCCEEEEECCCHHHHHHHHHHHHHCCCEEE--EECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCC
T ss_conf 3899799989476458999998541343379--95233443334444433332223467544213314674588502578
Q ss_pred HHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 35689997314557679975135446210012111233212247567765555678999999997421
Q gi|254780717|r 85 SFLVKPLHSLNKQSNVVTLSHSPDLHRILLRDNHSHFHDSEADDLHLWLNPLNVQYIAHVIAMELIKK 152 (294)
Q Consensus 85 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~dpH~Wl~p~n~~~~a~~I~~~L~~~ 152 (294)
.... .....+..++|-+...+. .. ..+...|-.++=|+.. ....+.+.|...
T Consensus 98 ~~~~--~~~~~~~~kiI~Id~d~~----~i-------~~~~~~d~~i~gD~~~---~L~~L~~~l~~~ 149 (177)
T d2djia1 98 FSEV--EGTFRNVDNFIQIDIDPA----ML-------GKRHHADVAILGDAAL---AIDEILNKVDAV 149 (177)
T ss_dssp TTTT--TTTTTTCSEEEEEESCGG----GT-------TSSSCCSEEEESCHHH---HHHHHHHHSCCC
T ss_pred CCCC--EECCCCCCCHHEEEECCC----CC-------CCCCCCCEEEEECHHH---HHHHHHHHHHHC
T ss_conf 7541--100023660006774652----25-------8754673589859999---999999864225
No 16
>d2ji7a1 c.31.1.3 (A:195-369) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]}
Probab=46.85 E-value=8 Score=16.35 Aligned_cols=64 Identities=17% Similarity=0.205 Sum_probs=35.2
Q ss_pred CCCCCEEEEEE--------CHHHHHHHHHHHCCCCEEEEEECCCCCC--CCCCCCHHHHHHHCCCCEEEEECCCCC
Q ss_conf 32388059997--------2289999999707944178870589983--533568024566502578999676610
Q gi|254780717|r 19 ARAGSLQVVVS--------IKPIHSIVSCIMQGIGTPALLVKGASSP--HEYSLRISEAMMLENADIIFWLGAEME 84 (294)
Q Consensus 19 ~~~~~~~Vv~s--------~~pl~~lv~~I~gd~~~V~~L~~~g~dp--H~y~~tp~d~~~l~~Adlii~~G~~~E 84 (294)
..+.++-|++- ...+..|++..+-.. +++....|.-| |-+.....-...+++||++|.+|..|.
T Consensus 17 ~~A~rPvii~G~g~~~~~a~~~l~~lae~~~iPv--~~t~~~~g~~~~~h~~~~~~~~~~~l~~aDlii~vG~~~~ 90 (175)
T d2ji7a1 17 KNAKRPVIMLGKGAAYAQCDDEIRALVEETGIPF--LPMGMAKGLLPDNHPQSAAATRAFALAQCDVCVLIGARLN 90 (175)
T ss_dssp HTCSSCEEEECHHHHHTTCHHHHHHHHHHHTCCE--EECTTTBTTBCTTCTTBCGGGHHHHHHHCSEEEEESCCSS
T ss_pred HHCCCEEEEECCCCCCCCCHHHHHHHHHHCEEEE--ECCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCC
T ss_conf 8489989998879241102799999765304102--1234223568875433222110112311231013512578
No 17
>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}
Probab=46.65 E-value=8.1 Score=16.33 Aligned_cols=44 Identities=16% Similarity=0.253 Sum_probs=37.0
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCEE
Q ss_conf 49788999999997549938998188897899999997199089
Q gi|254780717|r 219 MGAASLRNIRSKIISDKISCLFYGPEFDSKIIRSITNDTGVMSA 262 (294)
Q Consensus 219 ~s~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~~~~ 262 (294)
..++.+..+.+.+.+.++++++.++......+..++++.|++++
T Consensus 64 vp~~~~~~~l~~~~~~g~k~v~~~~g~~~~~~~~~a~~~gi~vi 107 (116)
T d1y81a1 64 VPPKVGLQVAKEAVEAGFKKLWFQPGAESEEIRRFLEKAGVEYS 107 (116)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEECTTSCCHHHHHHHHHHTCEEE
T ss_pred ECHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCEEE
T ss_conf 17899999999998669965885065211999999998599899
No 18
>d1ybha1 c.31.1.3 (A:281-459) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]}
Probab=44.71 E-value=8.6 Score=16.15 Aligned_cols=73 Identities=12% Similarity=0.203 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHCCCCEEEEEECCCCCC----CCCC-----CCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCEE
Q ss_conf 289999999707944178870589983----5335-----6802456650257899967661035689997314557679
Q gi|254780717|r 31 KPIHSIVSCIMQGIGTPALLVKGASSP----HEYS-----LRISEAMMLENADIIFWLGAEMESFLVKPLHSLNKQSNVV 101 (294)
Q Consensus 31 ~pl~~lv~~I~gd~~~V~~L~~~g~dp----H~y~-----~tp~d~~~l~~Adlii~~G~~~E~~~~~~~~~~~~~~~~i 101 (294)
.-+..|++..+-. -+++....|.-| +.+- -++.-...+++||+|+..|..+..+..........+.++|
T Consensus 35 ~~l~~lae~~~~P--v~tt~~~~g~~~~~h~~~~G~~G~~g~~~~~~~~~~aDlil~lG~~l~~~~~~~~~~~~~~~kiI 112 (179)
T d1ybha1 35 DELGRFVELTGIP--VASTLMGLGSYPCDDELSLHMLGMHGTVYANYAVEHSDLLLAFGVRFDDRVTGKLEAFASRAKIV 112 (179)
T ss_dssp HHHHHHHHHHCCC--EEECTTTTTSSCTTSTTEEEECSTTSCHHHHHHHHHCSEEEEESCCCCHHHHSSGGGTTTTSEEE
T ss_pred HHHHHHHHHHCCC--CEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEE
T ss_conf 9999987653424--20045666777643333444578868899999997544543203665632246423367778599
Q ss_pred EEEE
Q ss_conf 9751
Q gi|254780717|r 102 TLSH 105 (294)
Q Consensus 102 ~~~~ 105 (294)
-+..
T Consensus 113 ~Id~ 116 (179)
T d1ybha1 113 HIDI 116 (179)
T ss_dssp EEES
T ss_pred EEEC
T ss_conf 9967
No 19
>d1u6ka1 c.127.1.1 (A:2-283) F420-dependent methylenetetrahydromethanopterin dehydrogenase (MTD) {Archaeon Methanopyrus kandleri [TaxId: 2320]}
Probab=44.18 E-value=8.8 Score=16.09 Aligned_cols=136 Identities=10% Similarity=0.016 Sum_probs=70.2
Q ss_pred HHHHHHHHHHCCCCEEEE-EECCCCCCCCCCCCHHHHHH----------HCCCCEEEEECCCCCHHHHHHHHHC--CCCC
Q ss_conf 899999997079441788-70589983533568024566----------5025789996766103568999731--4557
Q gi|254780717|r 32 PIHSIVSCIMQGIGTPAL-LVKGASSPHEYSLRISEAMM----------LENADIIFWLGAEMESFLVKPLHSL--NKQS 98 (294)
Q Consensus 32 pl~~lv~~I~gd~~~V~~-L~~~g~dpH~y~~tp~d~~~----------l~~Adlii~~G~~~E~~~~~~~~~~--~~~~ 98 (294)
++.+++..--.|+-++.+ .+..|. .+.|.++.+ --+.|++|++|.+--..-.+..... ....
T Consensus 17 ~~~dLlLDErAdRedi~vrv~gsGa-----KM~pe~~e~~~~~~~~~~~~~~pDf~i~isPN~a~PGP~~ARE~l~~~gi 91 (282)
T d1u6ka1 17 MMMDMLLDERADREDVEFRVVGTSV-----KMDPECVEAAVEMALDIAEDFEPDFIVYGGPNPAAPGPSKAREMLADSEY 91 (282)
T ss_dssp HHTTGGGSTTSCCSSEEEEEEECTT-----CCSHHHHHHHHHHHHHHHHHHCCSEEEEECSCTTSHHHHHHHHHHHTSSS
T ss_pred HHHHHHHHHHHCCCCCEEEEECCCC-----CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCCC
T ss_conf 9999987654044686389842666-----76978888899888878885199989997898889995779999975699
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHH-----HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 679975135446210012111233212247567-----765555678999999997421865658899899998631222
Q gi|254780717|r 99 NVVTLSHSPDLHRILLRDNHSHFHDSEADDLHL-----WLNPLNVQYIAHVIAMELIKKDPRNKIIYEKNEEEFKNQLSQ 173 (294)
Q Consensus 99 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~dpH~-----Wl~p~n~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~L~~ 173 (294)
..+.+++.++......-+..+.+..--..||-+ ||||.-|..+-..+-..|+-- --++..+.+|++
T Consensus 92 P~ivI~D~p~~k~~d~~~~~gfGYIi~k~DpMIGArREFLDpvEMA~fNad~~kVLa~t---------Ga~RlvQ~~lD~ 162 (282)
T d1u6ka1 92 PAVIIGDAPGLKVKDEMEEQGLGYILVKPDAMLGARREFLDPVEMAIYNADLMKVLAAT---------GVFRVVQEAFDE 162 (282)
T ss_dssp CEEEEEEGGGGGGHHHHHHTTCEEEEETTSCCCCCCTTTCCHHHHHHHHHHHHHHHHHT---------THHHHHHHHHHH
T ss_pred CEEEECCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHH
T ss_conf 87997588525468999865885799726764442342038899886202599998842---------199999999999
Q ss_pred HHHHHHHH
Q ss_conf 35899985
Q gi|254780717|r 174 LDKELHSI 181 (294)
Q Consensus 174 l~~~~~~~ 181 (294)
+...++.-
T Consensus 163 vi~~v~~G 170 (282)
T d1u6ka1 163 LIEKAKED 170 (282)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHCC
T ss_conf 99999657
No 20
>d2ez9a1 c.31.1.3 (A:183-365) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]}
Probab=44.01 E-value=8.8 Score=16.08 Aligned_cols=80 Identities=9% Similarity=0.103 Sum_probs=39.9
Q ss_pred CCCEEEEE------ECHHHHHHHHHHHCCCCEEEEEECCCC----CCCCCC-----CCHHHHHHHCCCCEEEEECCCCCH
Q ss_conf 38805999------722899999997079441788705899----835335-----680245665025789996766103
Q gi|254780717|r 21 AGSLQVVV------SIKPIHSIVSCIMQGIGTPALLVKGAS----SPHEYS-----LRISEAMMLENADIIFWLGAEMES 85 (294)
Q Consensus 21 ~~~~~Vv~------s~~pl~~lv~~I~gd~~~V~~L~~~g~----dpH~y~-----~tp~d~~~l~~Adlii~~G~~~E~ 85 (294)
+.++-|++ +-.-+..|++.++-.. ++++...|. +|+..- -.+.-...+++||+++.+|..|..
T Consensus 30 A~rPvii~G~G~~~a~~~l~~lae~~~~Pv--~tt~~~~g~~~~~hp~~~G~~G~~~~~~~~~~i~~aDlil~vG~~l~~ 107 (183)
T d2ez9a1 30 AERPLIYYGIGARKAGKELEQLSKTLKIPL--MSTYPAKGIVADRYPAYLGSANRVAQKPANEALAQADVVLFVGNNYPF 107 (183)
T ss_dssp CSSEEEEECGGGTTCHHHHHHHHHHHTCCE--EECGGGTTSSCTTCTTBCCCCSSSSCHHHHHHHHHCSEEEEESCCCTT
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHCCCEEE--EEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCC
T ss_conf 799399983780635499998764043379--862145544323476433332234667777666246745886214675
Q ss_pred HHHHHHHHCCCCCCEEEEE
Q ss_conf 5689997314557679975
Q gi|254780717|r 86 FLVKPLHSLNKQSNVVTLS 104 (294)
Q Consensus 86 ~~~~~~~~~~~~~~~i~~~ 104 (294)
. .. -.....+.++|-+.
T Consensus 108 ~-~~-~~~~~~~~~iI~Id 124 (183)
T d2ez9a1 108 A-EV-SKAFKNTRYFLQID 124 (183)
T ss_dssp T-TT-TTTTTTCSEEEEEE
T ss_pred C-CC-EEECCCCCCHHEEE
T ss_conf 4-30-01013663032011
No 21
>d1ytla1 c.31.1.6 (A:17-174) Acetyl-CoA decarbonylase/synthase complex epsilon subunit 2, ACDE2 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=43.78 E-value=8.9 Score=16.05 Aligned_cols=37 Identities=11% Similarity=0.184 Sum_probs=21.8
Q ss_pred HHHHCCCCEEEEECCCCCH--HHHHHHHHCCCCCCEEEE
Q ss_conf 5665025789996766103--568999731455767997
Q gi|254780717|r 67 AMMLENADIIFWLGAEMES--FLVKPLHSLNKQSNVVTL 103 (294)
Q Consensus 67 ~~~l~~Adlii~~G~~~E~--~~~~~~~~~~~~~~~i~~ 103 (294)
++.+.+||+++..|..|.. ......+...++.+++.+
T Consensus 87 ~~~~~~aDLvi~iG~~~~~~~~~~~~~~~~~~~~k~I~I 125 (158)
T d1ytla1 87 FDGQGNYDLVLMLGSIYYHGSQMLAAIKNFAPHIRALAI 125 (158)
T ss_dssp TTSSCCCSEEEEESCCHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred HHCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCCEEEEE
T ss_conf 630367688999777246231124651114888858987
No 22
>d1kv5a_ c.1.1.1 (A:) Triosephosphate isomerase {Trypanosoma brucei [TaxId: 5691]}
Probab=38.74 E-value=11 Score=15.56 Aligned_cols=77 Identities=13% Similarity=0.279 Sum_probs=49.3
Q ss_pred CCEEEECCCHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHC-----------CCCEEEEECCCCHHHHHHHHH
Q ss_conf 781462062157789874981200346775444978899999999754-----------993899818889789999999
Q gi|254780717|r 187 KKKIIVFHEAYRYFASHYNLSIVTFPMSHSVFMGAASLRNIRSKIISD-----------KISCLFYGPEFDSKIIRSITN 255 (294)
Q Consensus 187 ~~~~i~~H~a~~Yf~~~~gl~~~~~~~~~~~~~s~~~l~~~~~~ik~~-----------~v~~if~e~~~~~~~~~~ia~ 255 (294)
++-++.|+|.| .+.++..|++.++.++...||+. +++.++. -..+++.++.|.+
T Consensus 159 ~~iiIAYEPvW--------------AIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~~~~ilYG-GSV~~~N~~~i~~ 223 (249)
T d1kv5a_ 159 AKVVIAYEPVW--------------AIGTGKVATPQQAQEAHALISSWVSSKIGADVAGELRILYG-GSVNGKNARTLYQ 223 (249)
T ss_dssp GGEEEEECCGG--------------GSSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEEE-SSCCTTTHHHHHT
T ss_pred CCEEEECCCEE--------------CCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEC-CCCCHHHHHHHHC
T ss_conf 24588517521--------------13655555523555566777788887507434377748971-8979869999966
Q ss_pred HHCCCEEEECCCCCCCCCCCCCHHHHHH
Q ss_conf 7199089980533678778167899999
Q gi|254780717|r 256 DTGVMSAILDPEGMLIAEGPELYFQLMR 283 (294)
Q Consensus 256 e~~~~~~~ld~~~~~~~~~~~~Y~~~m~ 283 (294)
.-++..+.+---+. .++ +.++++
T Consensus 224 ~~~vDG~LVGgASl----~~e-F~~Ii~ 246 (249)
T d1kv5a_ 224 QRDVNGFLVGGASL----KPE-FVDIIK 246 (249)
T ss_dssp STTCCEEEESGGGG----STT-HHHHHH
T ss_pred CCCCCEEEECHHHC----CHH-HHHHHH
T ss_conf 88999789522756----989-999998
No 23
>d1iv0a_ c.55.3.8 (A:) Hypothetical protein, YqgF homologue {Thermus thermophilus [TaxId: 274]}
Probab=37.98 E-value=11 Score=15.49 Aligned_cols=29 Identities=7% Similarity=0.184 Sum_probs=14.5
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEECCCCH
Q ss_conf 49788999999997549938998188897
Q gi|254780717|r 219 MGAASLRNIRSKIISDKISCLFYGPEFDS 247 (294)
Q Consensus 219 ~s~~~l~~~~~~ik~~~v~~if~e~~~~~ 247 (294)
+..+.+..+.+.+++.++++.|++.-+++
T Consensus 69 ~~~~~v~~f~~~L~~~~lpv~~~DErlTS 97 (98)
T d1iv0a_ 69 AQAGKVLPLVEALRARGVEVELWDERFTT 97 (98)
T ss_dssp CCSSTTHHHHHHHHHTTCEEEEECCSCCC
T ss_pred HHHHHHHHHHHHHHHCCCCEEEECCCCCC
T ss_conf 88999999999996479999998689888
No 24
>d1trea_ c.1.1.1 (A:) Triosephosphate isomerase {Escherichia coli [TaxId: 562]}
Probab=37.25 E-value=11 Score=15.42 Aligned_cols=85 Identities=7% Similarity=0.185 Sum_probs=54.5
Q ss_pred CCEEEECCCHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHH----------CCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 78146206215778987498120034677544497889999999975----------49938998188897899999997
Q gi|254780717|r 187 KKKIIVFHEAYRYFASHYNLSIVTFPMSHSVFMGAASLRNIRSKIIS----------DKISCLFYGPEFDSKIIRSITND 256 (294)
Q Consensus 187 ~~~~i~~H~a~~Yf~~~~gl~~~~~~~~~~~~~s~~~l~~~~~~ik~----------~~v~~if~e~~~~~~~~~~ia~e 256 (294)
++-++.|+|.| .+.++..|++.++.++.+.+++ .+++. ++.-..++..+..+.+.
T Consensus 160 ~~iiIAYEPvW--------------AIGtG~~a~~~~~~~~~~~ir~~l~~~~~~~~~~v~i-LYGGSV~~~N~~~i~~~ 224 (255)
T d1trea_ 160 EGAVIAYEPVW--------------AIGTGKSATPAQAQAVHKFIRDHIAKVDANIAEQVII-QYGGSVNASNAAELFAQ 224 (255)
T ss_dssp TTCEEEECCGG--------------GSSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEE-EECSCCCTTTHHHHHTS
T ss_pred CCCEEEECCHH--------------HCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHCCCCCE-EECCCCCHHHHHHHHCC
T ss_conf 67079965165--------------3155546674102456788888886403222377518-86178687389999668
Q ss_pred HCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 19908998053367877816789999999999987
Q gi|254780717|r 257 TGVMSAILDPEGMLIAEGPELYFQLMRSMSNSIAK 291 (294)
Q Consensus 257 ~~~~~~~ld~~~~~~~~~~~~Y~~~m~~n~~~l~k 291 (294)
-++..+.+- .....++.|.++.+ -++..+|
T Consensus 225 ~~vdG~LVG----gASl~~~~F~~Ii~-~~~~~k~ 254 (255)
T d1trea_ 225 PDIDGALVG----GASLKADAFAVIVK-AAEAAKQ 254 (255)
T ss_dssp TTCCEEEES----GGGGCHHHHHHHHH-HHHHHHC
T ss_pred CCCCEEEEC----HHHCCHHHHHHHHH-HHHHHHC
T ss_conf 899879953----55468899999999-9997413
No 25
>d2fdsa1 c.1.2.3 (A:1-324) Protozoan orotidine monophosphate decarboxylase {Plasmodium berghei [TaxId: 5821]}
Probab=33.20 E-value=2.2 Score=19.89 Aligned_cols=40 Identities=15% Similarity=-0.042 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHCCCCCH---HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 899999999742186565---8899899998631222358999
Q gi|254780717|r 140 YIAHVIAMELIKKDPRNK---IIYEKNEEEFKNQLSQLDKELH 179 (294)
Q Consensus 140 ~~a~~I~~~L~~~dP~~~---~~y~~N~~~~~~~L~~l~~~~~ 179 (294)
.+.+.|-+++...-...| ++|+....+=.+.|+++-..++
T Consensus 87 ~f~~~iIda~~~~v~~~K~~lafFe~~G~~G~~~L~~~i~~l~ 129 (324)
T d2fdsa1 87 HFCFYIINNTKEYALIYKMNFAFYIPYGSVGINALKNVFDYLN 129 (324)
T ss_dssp HHHHHHHHHHGGGCSEEEEEGGGTGGGTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999973050529927399999817889999999999864
No 26
>d1xg7a_ a.96.1.6 (A:) Hypothetical protein PF0904 {Pyrococcus furiosus [TaxId: 2261]}
Probab=30.75 E-value=12 Score=15.19 Aligned_cols=96 Identities=18% Similarity=0.171 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCC-CCCEEEECCCHHHHHHHHCCCCEECCCCCCCCCCCHH--HHHHHHHHHHHCCCC
Q ss_conf 9899998631222358999850300-2781462062157789874981200346775444978--899999999754993
Q gi|254780717|r 161 EKNEEEFKNQLSQLDKELHSILQPV-EKKKIIVFHEAYRYFASHYNLSIVTFPMSHSVFMGAA--SLRNIRSKIISDKIS 237 (294)
Q Consensus 161 ~~N~~~~~~~L~~l~~~~~~~~~~~-~~~~~i~~H~a~~Yf~~~~gl~~~~~~~~~~~~~s~~--~l~~~~~~ik~~~v~ 237 (294)
.++...|-..|..+-..+...+..- ..+.+|-.---|+|.++--+-+... .|..=|-|- .+..+...+
T Consensus 119 ~~~~~~yy~~m~~l~~~LA~~l~~~~~~KTIVFAvKM~gYA~r~~~~~~~p---~p~eIpIPvD~RI~~~t~~~------ 189 (245)
T d1xg7a_ 119 LKDLEGYYKNMKMLWKALIKIMGSREDSKTIVFTVKMFGYASRIAFSRFIP---YPMEIPIPEDLRIKSVTSKL------ 189 (245)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHTTSCCC---CCTTSCCCCCHHHHHHHHTT------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHCCCCCC---CCCCCCCCCHHHHHHHHHCC------
T ss_conf 667889985399999999999689987563432699899999995477878---98789996218999997202------
Q ss_pred EEEEECCCCHHHHHHHHHHHCCCEEEECCCCC
Q ss_conf 89981888978999999971990899805336
Q gi|254780717|r 238 CLFYGPEFDSKIIRSITNDTGVMSAILDPEGM 269 (294)
Q Consensus 238 ~if~e~~~~~~~~~~ia~e~~~~~~~ld~~~~ 269 (294)
. .....+....+++++|++...||++-|
T Consensus 190 ---~-~e~~~~fW~~Vak~~~IPpLHLDSilW 217 (245)
T d1xg7a_ 190 ---T-QEKPTKFWMKIGQESGVPPLHIDSLIW 217 (245)
T ss_dssp ---C-SSCHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred ---C-CHHHHHHHHHHHHCCCCCCCHHHHHHH
T ss_conf ---3-014999999998624998210277899
No 27
>d2ctza1 c.67.1.3 (A:1-421) O-acetyl-L-homoserine sulfhydrylase {Thermus thermophilus [TaxId: 274]}
Probab=27.48 E-value=16 Score=14.39 Aligned_cols=129 Identities=12% Similarity=0.105 Sum_probs=52.6
Q ss_pred HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCEE-----EECCCHHHHHHHHCCCC---EECCCCCCCCCC
Q ss_conf 21865658899899998631222358999850---30027814-----62062157789874981---200346775444
Q gi|254780717|r 151 KKDPRNKIIYEKNEEEFKNQLSQLDKELHSIL---QPVEKKKI-----IVFHEAYRYFASHYNLS---IVTFPMSHSVFM 219 (294)
Q Consensus 151 ~~dP~~~~~y~~N~~~~~~~L~~l~~~~~~~~---~~~~~~~~-----i~~H~a~~Yf~~~~gl~---~~~~~~~~~~~~ 219 (294)
-+.|..+-......+.+.-++++..+-..... .......- +..|+.+..+.+.+.=. +.++....
T Consensus 271 ~~sP~~a~l~~rgl~TL~lRm~~~~~nA~~vA~~L~~hp~V~~V~yPgL~s~p~~~~a~~~~~g~~G~~~sf~l~~---- 346 (421)
T d2ctza1 271 ALGPFEAWVVLLGMETLSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYFKGKPGAVLTFGLKG---- 346 (421)
T ss_dssp CCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHHTTCCCSEEEEEETT----
T ss_pred CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEEEECC----
T ss_conf 7997999988567740056799999989998764414897469966874788239999873479975289998449----
Q ss_pred CHHHHHHHHHHHHH-------CCCCEEEEECCC--CHHHHHHHHHHHCCC--EEEECCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 97889999999975-------499389981888--978999999971990--8998053367877816789999999999
Q gi|254780717|r 220 GAASLRNIRSKIIS-------DKISCLFYGPEF--DSKIIRSITNDTGVM--SAILDPEGMLIAEGPELYFQLMRSMSNS 288 (294)
Q Consensus 220 s~~~l~~~~~~ik~-------~~v~~if~e~~~--~~~~~~~ia~e~~~~--~~~ld~~~~~~~~~~~~Y~~~m~~n~~~ 288 (294)
+.....++.+.++- .++..++.-|-. ....-..-.++.|+. .+.| +.|. +...++ ++.
T Consensus 347 ~~~~a~~f~~~L~l~~~a~SlGg~eSLi~~pa~~th~~~~~e~r~~~GI~~~liRl-SvGl------Ed~eDL----i~D 415 (421)
T d2ctza1 347 GYEAAKRFISRLKLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRL-SVGL------EHVEDL----KAE 415 (421)
T ss_dssp HHHHHHHHHHTCSSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTEEEE-ECCS------SCHHHH----HHH
T ss_pred CHHHHHHHHHCCCCCEECCCCCCCCCEEECCCCCCCHHCCHHHHHHCCCCCCEEEE-EECC------CCHHHH----HHH
T ss_conf 99999999970884765335553133313740014101899999866989496999-7520------999999----999
Q ss_pred HHHHCC
Q ss_conf 987419
Q gi|254780717|r 289 IAKNCS 294 (294)
Q Consensus 289 l~k~ls 294 (294)
|.+|||
T Consensus 416 L~qALa 421 (421)
T d2ctza1 416 LKEALA 421 (421)
T ss_dssp HHHHTC
T ss_pred HHHHCC
T ss_conf 998549
No 28
>d1n7ka_ c.1.10.1 (A:) Deoxyribose-phosphate aldolase DeoC {Archaeon Aeropyrum pernix [TaxId: 56636]}
Probab=26.85 E-value=17 Score=14.32 Aligned_cols=22 Identities=5% Similarity=-0.111 Sum_probs=9.0
Q ss_pred CHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 9788999999997549938998
Q gi|254780717|r 220 GAASLRNIRSKIISDKISCLFY 241 (294)
Q Consensus 220 s~~~l~~~~~~ik~~~v~~if~ 241 (294)
+..++..+.+...+.++.+|=+
T Consensus 146 ~~~~i~~a~~~a~~aGadFVKT 167 (234)
T d1n7ka_ 146 DDKTLSLLVDSSRRAGADIVKT 167 (234)
T ss_dssp CHHHHHHHHHHHHHTTCSEEES
T ss_pred CHHHHHHHHHHHHHHHHHHEEE
T ss_conf 4679999999998864125022
No 29
>d1knxa1 c.98.2.1 (A:1-132) HPr kinase/phoshatase HprK N-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=26.85 E-value=17 Score=14.32 Aligned_cols=48 Identities=6% Similarity=-0.012 Sum_probs=36.0
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEEC-CCCHHHHHHHHHHHCCCEEEE
Q ss_conf 444978899999999754993899818-889789999999719908998
Q gi|254780717|r 217 VFMGAASLRNIRSKIISDKISCLFYGP-EFDSKIIRSITNDTGVMSAIL 264 (294)
Q Consensus 217 ~~~s~~~l~~~~~~ik~~~v~~if~e~-~~~~~~~~~ia~e~~~~~~~l 264 (294)
...++....+..+.+-+.+++|++.-. ...+..+-.+|++.|+++..-
T Consensus 65 ~~l~~e~r~~~l~~l~~~~~PciIvt~~~~~p~~l~~~a~~~~vPll~T 113 (132)
T d1knxa1 65 SQKTLVEQQQILHNLLKLNPPAIILTKSFTDPTVLLQVNQTYQVPILKT 113 (132)
T ss_dssp TTSCHHHHTTTHHHHHTTCCSCEEEETTTCCCHHHHHHGGGTCCCEEEE
T ss_pred HHCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEE
T ss_conf 9689999999999984769988999797999999999999829968981
No 30
>d1nu0a_ c.55.3.8 (A:) Hypothetical protein YqgF (RuvX) {Escherichia coli [TaxId: 562]}
Probab=26.20 E-value=17 Score=14.25 Aligned_cols=57 Identities=12% Similarity=0.112 Sum_probs=24.3
Q ss_pred HHHHHHHCCCCEE--CCC--CCCCCCCCHHHHHHHHHHHHHC-CCCEEEEECCCCHHHHHHH
Q ss_conf 5778987498120--034--6775444978899999999754-9938998188897899999
Q gi|254780717|r 197 YRYFASHYNLSIV--TFP--MSHSVFMGAASLRNIRSKIISD-KISCLFYGPEFDSKIIRSI 253 (294)
Q Consensus 197 ~~Yf~~~~gl~~~--~~~--~~~~~~~s~~~l~~~~~~ik~~-~v~~if~e~~~~~~~~~~i 253 (294)
+.-++++++...+ +.. .+....+..+.+.++.+.+++. ++++.|++..+++..++..
T Consensus 45 l~~i~~e~~~~~iVvG~P~~~~g~~~~~~~~v~~f~~~L~~~~~i~V~~~DEr~TS~eA~~~ 106 (138)
T d1nu0a_ 45 IERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSG 106 (138)
T ss_dssp HHHHHHHHCCSEEEEEEEECTTSCBCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCC---
T ss_pred HHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHH
T ss_conf 99875404763899614322355557999999999999854549876997153249999999
No 31
>d1h6qa_ b.88.1.2 (A:) Translationally controlled tumor protein TCTP (histamine-releasing factor) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=26.10 E-value=17 Score=14.24 Aligned_cols=36 Identities=19% Similarity=0.325 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 567899999999742186565889989999863122
Q gi|254780717|r 137 NVQYIAHVIAMELIKKDPRNKIIYEKNEEEFKNQLS 172 (294)
Q Consensus 137 n~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~L~ 172 (294)
..+...+.|.+.|.+..|+..+.|++|++.+.+.+.
T Consensus 87 yiK~YmK~vk~~L~e~~perv~~Fk~~a~~~vK~Il 122 (168)
T d1h6qa_ 87 YIKGYMKAIKARLQESNPERVPVFEKNAIGFVKKIL 122 (168)
T ss_dssp HHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999864088899999986799999998
No 32
>d1duvg1 c.78.1.1 (G:1-150) Ornithine transcarbamoylase {Escherichia coli [TaxId: 562]}
Probab=25.34 E-value=18 Score=14.15 Aligned_cols=75 Identities=9% Similarity=0.041 Sum_probs=43.8
Q ss_pred CCCCCEEE--ECCC------HHHHHHHHCCCCEECCCCCC---CCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHH
Q ss_conf 00278146--2062------15778987498120034677---5444978899999999754993899818889789999
Q gi|254780717|r 184 PVEKKKII--VFHE------AYRYFASHYNLSIVTFPMSH---SVFMGAASLRNIRSKIISDKISCLFYGPEFDSKIIRS 252 (294)
Q Consensus 184 ~~~~~~~i--~~H~------a~~Yf~~~~gl~~~~~~~~~---~~~~s~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ 252 (294)
.++++.++ -++| +|.--+++.|.+++.+.... ....+.+| ..+.+... ..+|++ .......++.
T Consensus 41 ~L~gk~v~~lF~epSTRTR~SFe~A~~~LG~~~i~~~~~~ss~~kgEs~~D---t~~~ls~~-~d~iv~-R~~~~~~~~~ 115 (150)
T d1duvg1 41 KLTGKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKD---TARVLGRM-YDGIQY-RGYGQEIVET 115 (150)
T ss_dssp SCTTCEEEEEESSCCSHHHHHHHHHHHHTTCEEEEECSSSSCBTTTBCHHH---HHHHHTTT-CSEEEE-ECSCHHHHHH
T ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHEECCCCEEECCCCCCCCCCCCCHHH---HHHHHHHC-CCEEEE-ECCCCCCHHH
T ss_conf 478867888742797033544310120147623423553133444630578---99998743-756887-2256631211
Q ss_pred HHHHHCCCEEE
Q ss_conf 99971990899
Q gi|254780717|r 253 ITNDTGVMSAI 263 (294)
Q Consensus 253 ia~e~~~~~~~ 263 (294)
+++-..++++.
T Consensus 116 ~~~~~~~pviN 126 (150)
T d1duvg1 116 LAEYASVPVWN 126 (150)
T ss_dssp HHHHHSSCEEE
T ss_pred CCCCCCEEEEC
T ss_conf 11426433880
No 33
>d1j6oa_ c.1.9.12 (A:) Hypothetical protein TM0667 {Thermotoga maritima [TaxId: 2336]}
Probab=25.21 E-value=18 Score=14.13 Aligned_cols=15 Identities=7% Similarity=0.045 Sum_probs=6.3
Q ss_pred EEEEEECCCCCCCCC
Q ss_conf 178870589983533
Q gi|254780717|r 46 TPALLVKGASSPHEY 60 (294)
Q Consensus 46 ~V~~L~~~g~dpH~y 60 (294)
.|..++-.|.||.+|
T Consensus 32 gV~~ii~~~~~~~~~ 46 (260)
T d1j6oa_ 32 NIEFVVNVGVNLEDS 46 (260)
T ss_dssp TEEEEEEECSSHHHH
T ss_pred CCCEEEEECCCHHHH
T ss_conf 999899914999999
No 34
>d1vhxa_ c.55.3.8 (A:) Hypothetical protein YrrK (RuvX) {Bacillus subtilis [TaxId: 1423]}
Probab=23.43 E-value=19 Score=13.92 Aligned_cols=65 Identities=8% Similarity=0.179 Sum_probs=40.3
Q ss_pred HHHHHHHHCCCCEE--CCCCC--CCCCCCHHHHHHHHHHHHHC-CCCEEEEECCCCHHHHHHHHHHHCCC
Q ss_conf 15778987498120--03467--75444978899999999754-99389981888978999999971990
Q gi|254780717|r 196 AYRYFASHYNLSIV--TFPMS--HSVFMGAASLRNIRSKIISD-KISCLFYGPEFDSKIIRSITNDTGVM 260 (294)
Q Consensus 196 a~~Yf~~~~gl~~~--~~~~~--~~~~~s~~~l~~~~~~ik~~-~v~~if~e~~~~~~~~~~ia~e~~~~ 260 (294)
.+..+.++++.+.+ |.... ....+..+.+..+.+.+++. ++++.|++..+++..++...++.+.+
T Consensus 45 ~l~~ii~e~~i~~iViGlP~~~dg~~~~~~~~~~~f~~~l~~~~~i~V~~~DEr~TS~~A~~~l~~~~~~ 114 (140)
T d1vhxa_ 45 RLSELIKDYTIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLTTMAAEKMLIAADVS 114 (140)
T ss_dssp HHHHHHTTSEEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHCCCC
T ss_conf 9999998516565998355224786136778889999983467785579841443799999999976997
No 35
>d2q02a1 c.1.15.4 (A:1-271) Putative cytoplasmic protein STM4435 {Salmonella typhimurium [TaxId: 90371]}
Probab=23.06 E-value=20 Score=13.87 Aligned_cols=18 Identities=11% Similarity=0.023 Sum_probs=8.5
Q ss_pred CHHHHHHHHHHHCCCCEE
Q ss_conf 228999999970794417
Q gi|254780717|r 30 IKPIHSIVSCIMQGIGTP 47 (294)
Q Consensus 30 ~~pl~~lv~~I~gd~~~V 47 (294)
+.-.-..++..|=+-++.
T Consensus 20 lee~l~~a~~~G~dgiEl 37 (271)
T d2q02a1 20 IEAFFRLVKRLEFNKVEL 37 (271)
T ss_dssp HHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHCCCEEEE
T ss_conf 999999999859998999
No 36
>d1m5wa_ c.1.24.1 (A:) Pyridoxine 5'-phosphate synthase {Escherichia coli [TaxId: 562]}
Probab=22.29 E-value=20 Score=13.78 Aligned_cols=43 Identities=16% Similarity=0.305 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHCCCCE-EEEECCCCHHHHHHHHHHHCCCEEEECC
Q ss_conf 788999999997549938-9981888978999999971990899805
Q gi|254780717|r 221 AASLRNIRSKIISDKISC-LFYGPEFDSKIIRSITNDTGVMSAILDP 266 (294)
Q Consensus 221 ~~~l~~~~~~ik~~~v~~-if~e~~~~~~~~~~ia~e~~~~~~~ld~ 266 (294)
...|..+++.+++.++++ +|.+| +.+.++ .++++|+..++|+.
T Consensus 112 ~~~L~~~i~~l~~~girvSLFiDp--d~~~i~-~a~~lGad~IElhT 155 (242)
T d1m5wa_ 112 RDKMRDACKRLADAGIQVSLFIDA--DEEQIK-AAAEVGAPFIEIHT 155 (242)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECS--CHHHHH-HHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECC--CHHHHH-HHHHCCCCEEEEEC
T ss_conf 889999999998669707999445--246577-88642766355320
No 37
>d2hk6a1 c.92.1.1 (A:2-310) Ferrochelatase {Bacillus subtilis [TaxId: 1423]}
Probab=22.11 E-value=21 Score=13.75 Aligned_cols=138 Identities=10% Similarity=0.044 Sum_probs=64.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHCCCCCH-------------HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECC
Q ss_conf 756776555567899999999742186565-------------8899899998631222358999850300278146206
Q gi|254780717|r 128 DLHLWLNPLNVQYIAHVIAMELIKKDPRNK-------------IIYEKNEEEFKNQLSQLDKELHSILQPVEKKKIIVFH 194 (294)
Q Consensus 128 dpH~Wl~p~n~~~~a~~I~~~L~~~dP~~~-------------~~y~~N~~~~~~~L~~l~~~~~~~~~~~~~~~~i~~H 194 (294)
=+++|-+|.....+++.|.+.+.++-.++. ..+.++..-|..++.+....+.+.+.. . ...++|
T Consensus 143 I~~~~~~p~yi~a~a~~I~~~~~~~~~~~~~~~~llfS~HgiP~~~~~~gdpY~~~~~~t~~~i~~~l~~-~-~~~~~f- 219 (309)
T d2hk6a1 143 VESWYDEPKFVTYWVDRVKETYASMPEDERENAMLIVSAHSLPEKIKEFGDPYPDQLHESAKLIAEGAGV-S-EYAVGW- 219 (309)
T ss_dssp CCCCTTCHHHHHHHHHHHHHHHHHSCHHHHTSEEEEEEEECCBGGGGGGTCCHHHHHHHHHHHHHHHHTC-C-CEEEEE-
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCC-C-CEEEEE-
T ss_conf 6565788348999999999999858643168634861265552446645996189999999999986487-6-069987-
Q ss_pred CHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE-ECCCCHHHHHH----------HHHHHCCCEEE
Q ss_conf 21577898749812003467754449788999999997549938998-18889789999----------99971990899
Q gi|254780717|r 195 EAYRYFASHYNLSIVTFPMSHSVFMGAASLRNIRSKIISDKISCLFY-GPEFDSKIIRS----------ITNDTGVMSAI 263 (294)
Q Consensus 195 ~a~~Yf~~~~gl~~~~~~~~~~~~~s~~~l~~~~~~ik~~~v~~if~-e~~~~~~~~~~----------ia~e~~~~~~~ 263 (294)
..++|. ..+=.+|+. -..+.+...+.+++.|++ -+.|-..-+|+ ++++.|.....
T Consensus 220 ------QSr~g~------~~~WL~P~t--~~~l~~l~~~~g~k~v~v~p~gFvsD~lETl~Eidie~~e~~~~~G~~~~r 285 (309)
T d2hk6a1 220 ------QSEGNT------PDPWLGPDV--QDLTRDLFEQKGYQAFVYVPVGFVADHLEVLYDNDYECKVVTDDIGASYYR 285 (309)
T ss_dssp ------ECCCCC------SSCBSSCBH--HHHHHHHHHHHCCSEEEEECTTCCSSCHHHHTTTTTHHHHHHHHHTCEEEC
T ss_pred ------EECCCC------CCCEECCCH--HHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf ------514788------763004532--778998877259737999898714333554999889999999975997898
Q ss_pred ECCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 805336787781678999999999
Q gi|254780717|r 264 LDPEGMLIAEGPELYFQLMRSMSN 287 (294)
Q Consensus 264 ld~~~~~~~~~~~~Y~~~m~~n~~ 287 (294)
+..++ +...++++|...+.
T Consensus 286 ip~lN-----~~~~fi~~La~lv~ 304 (309)
T d2hk6a1 286 PEMPN-----AKPEFIDALATVVL 304 (309)
T ss_dssp CCCCT-----TCHHHHHHHHHHHH
T ss_pred ECCCC-----CCHHHHHHHHHHHH
T ss_conf 15999-----99999999999999
No 38
>d1n2za_ c.92.2.2 (A:) Vitamin B12 binding protein BtuF {Escherichia coli [TaxId: 562]}
Probab=22.01 E-value=21 Score=13.74 Aligned_cols=229 Identities=9% Similarity=-0.047 Sum_probs=88.5
Q ss_pred CEEEEEECHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEE
Q ss_conf 80599972289999999707944178870589983533568024566502578999676610356899973145576799
Q gi|254780717|r 23 SLQVVVSIKPIHSIVSCIMQGIGTPALLVKGASSPHEYSLRISEAMMLENADIIFWLGAEMESFLVKPLHSLNKQSNVVT 102 (294)
Q Consensus 23 ~~~Vv~s~~pl~~lv~~I~gd~~~V~~L~~~g~dpH~y~~tp~d~~~l~~Adlii~~G~~~E~~~~~~~~~~~~~~~~i~ 102 (294)
+.+||+-.+....++-.+|..-+.|. +.+ --|...+++. .+|...++-+++++.- .+ .+|-
T Consensus 2 ~~RIVsl~~~~te~l~aLG~~~Vgvs-----~~~-----~~p~~~~~~p------~vg~~~~~~~E~i~~l-~P--Dlii 62 (245)
T d1n2za_ 2 APRVITLSPANTELAFAAGITPVGVS-----SYS-----DYPPQAQKIE------QVSTWQGMNLERIVAL-KP--DLVI 62 (245)
T ss_dssp CCCEEECSHHHHHHHHHTTCCCSBEE-----TTC-----CCSGGGGGSC------EEEETTEECHHHHHHT-CC--SEEE
T ss_pred CCEEEEECCHHHHHHHHCCCCCEEEE-----CCC-----CCCHHHHCCC------EECCCCCCCHHHHHHC-CC--CEEE
T ss_conf 96399958438999998899858997-----788-----9877882698------7588889899998205-98--0799
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 75135446210012111233212247567765555678999999997421865658899899998631222358999850
Q gi|254780717|r 103 LSHSPDLHRILLRDNHSHFHDSEADDLHLWLNPLNVQYIAHVIAMELIKKDPRNKIIYEKNEEEFKNQLSQLDKELHSIL 182 (294)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~dpH~Wl~p~n~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~L~~l~~~~~~~~ 182 (294)
........... ..-..-+..--..+++ +...+......+++.+. ..+.-++-.+.+.++++.+.+.....-
T Consensus 63 ~~~~~~~~~~~-~~l~~~~i~v~~~~~~---~~~~~~~~i~~lg~~~g-----~~~~a~~l~~~~~~~l~~~~~~~~~~~ 133 (245)
T d1n2za_ 63 AWRGGNAERQV-DQLASLGIKVMWVDAT---SIEQIANALRQLAPWSP-----QPDKAEQAAQSLLDQYAQLKAQYADKP 133 (245)
T ss_dssp ECTTTSCHHHH-HHHHHHTCCEEECCCC---SHHHHHHHHHHHGGGCS-----CHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred EECCCCCHHHH-HHHHHCCCCEEEECCC---CHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 86587708899-9875125531310357---88998899999998766-----468999999999998878776531465
Q ss_pred CC-----C-CCCEEEECCCHH-HHHHHHCCCCEECCCCC-CCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHH
Q ss_conf 30-----0-278146206215-77898749812003467-7544497889999999975499389981888978999999
Q gi|254780717|r 183 QP-----V-EKKKIIVFHEAY-RYFASHYNLSIVTFPMS-HSVFMGAASLRNIRSKIISDKISCLFYGPEFDSKIIRSIT 254 (294)
Q Consensus 183 ~~-----~-~~~~~i~~H~a~-~Yf~~~~gl~~~~~~~~-~~~~~s~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia 254 (294)
.+ . .+..+....++| +.+.+..|.+-..-... +-...|. +.+...+..+||....... ...+.
T Consensus 134 ~~~~~~~~~~~~~~~~g~~s~~~~~i~~aG~~nv~~~~~~~~~~vs~-------E~i~~~dPDvIi~~~~~~~--~~~~~ 204 (245)
T d1n2za_ 134 KKRVFLQFGINPPFTSGKESIQNQVLEVCGGENIFKDSRVPWPQVSR-------EQVLARSPQAIVITGGPDQ--IPKIK 204 (245)
T ss_dssp CEEEEECBCSSSCBCCCSSSHHHHHHHHTTEEETTTTCSSSSCBCCH-------HHHHTTCCSEEEEESCGGG--HHHHH
T ss_pred CCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCH-------HHHHHHCCCEEEEECCCCC--HHHHH
T ss_conf 44421577404643446787678999870775333445678876686-------7787609999999589741--47787
Q ss_pred H----HHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 9----71990899805336787781678999999999998
Q gi|254780717|r 255 N----DTGVMSAILDPEGMLIAEGPELYFQLMRSMSNSIA 290 (294)
Q Consensus 255 ~----e~~~~~~~ld~~~~~~~~~~~~Y~~~m~~n~~~l~ 290 (294)
+ -..++++.+|+.-. ...|+ ...+-+...++.|.
T Consensus 205 ~~~~~~~~~~v~~~~~~~~-~~~gp-r~~~g~~~La~~l~ 242 (245)
T d1n2za_ 205 QYWGEQLKIPVIPLTSDWF-ERASP-RIILAAQQLCNALS 242 (245)
T ss_dssp HHHTSCSCCCEEEECHHHH-HSSST-THHHHHHHHHHHHT
T ss_pred HHHHHCCCCEEEEECCCEE-CCCCC-HHHHHHHHHHHHHH
T ss_conf 5443233863999880600-38471-59999999999998
No 39
>d1x9ma1 c.55.3.5 (A:1-210) Exonuclease domain of T7 DNA polymerase {Bacteriophage T7 [TaxId: 10760]}
Probab=21.91 E-value=17 Score=14.20 Aligned_cols=27 Identities=15% Similarity=0.142 Sum_probs=20.1
Q ss_pred HHHCCCCEEE-EECCCCC-HHHHHHHHHC
Q ss_conf 6650257899-9676610-3568999731
Q gi|254780717|r 68 MMLENADIIF-WLGAEME-SFLVKPLHSL 94 (294)
Q Consensus 68 ~~l~~Adlii-~~G~~~E-~~~~~~~~~~ 94 (294)
..+.++|+++ |||.+|+ |++.+.....
T Consensus 48 ~~l~~~D~ivghN~~~FD~P~L~~~~~~~ 76 (204)
T d1x9ma1 48 AEVARGGLIVFHNGHKYDVPALTKLAKLQ 76 (204)
T ss_dssp HHHHTTCCEEESSTTTTHHHHHHHHHHHH
T ss_pred HHHHCCCEEEEECCCCCCHHHHHHHHHHH
T ss_conf 99716899999734542089999998875
No 40
>d1o4va_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Thermotoga maritima [TaxId: 2336]}
Probab=21.26 E-value=21 Score=13.64 Aligned_cols=31 Identities=19% Similarity=0.280 Sum_probs=18.4
Q ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEE
Q ss_conf 257899967661035689997314557679975
Q gi|254780717|r 72 NADIIFWLGAEMESFLVKPLHSLNKQSNVVTLS 104 (294)
Q Consensus 72 ~Adlii~~G~~~E~~~~~~~~~~~~~~~~i~~~ 104 (294)
+.++|| -|.|++..+...+.... ..++|.+-
T Consensus 55 ~~~viI-a~AG~aa~LpgvvA~~t-~~PVIgvP 85 (169)
T d1o4va_ 55 GIEVII-AGAGGAAHLPGMVASIT-HLPVIGVP 85 (169)
T ss_dssp TCCEEE-EEEESSCCHHHHHHHHC-SSCEEEEE
T ss_pred CCEEEE-EEECCCCCCHHHHHHHC-CEEEEECC
T ss_conf 982899-96057767567888835-61488546
No 41
>d1ovma1 c.31.1.3 (A:181-341) Indole-3-pyruvate decarboxylase {Enterobacter cloacae [TaxId: 550]}
Probab=20.68 E-value=22 Score=13.57 Aligned_cols=68 Identities=12% Similarity=0.115 Sum_probs=33.1
Q ss_pred CCCCCEEEEEECHHH----HHHHHHHHCC-CCEEE-EEECCCC----CCCCC------CCCHHHHHHHCCCCEEEEECCC
Q ss_conf 323880599972289----9999997079-44178-8705899----83533------5680245665025789996766
Q gi|254780717|r 19 ARAGSLQVVVSIKPI----HSIVSCIMQG-IGTPA-LLVKGAS----SPHEY------SLRISEAMMLENADIIFWLGAE 82 (294)
Q Consensus 19 ~~~~~~~Vv~s~~pl----~~lv~~I~gd-~~~V~-~L~~~g~----dpH~y------~~tp~d~~~l~~Adlii~~G~~ 82 (294)
.++.+|-|++--... ..-+++++.. ...|. +...-|. +|..+ -.++.-.+.+.+||+++.+|..
T Consensus 27 ~~AkrP~il~G~gv~~~~a~~~l~~l~e~~~iPv~tt~~gkg~i~e~~p~~~G~~~G~~~~~~~~~~i~~aDliL~iG~~ 106 (161)
T d1ovma1 27 AMSKRTALLADFLVLRHGLKHALQKWVKEVPMAHATMLMGKGIFDERQAGFYGTYSGSASTGAVKEAIEGADTVLCVGTR 106 (161)
T ss_dssp HTCSCEEEEECHHHHHTTCHHHHHHHHHHSCCEEEECGGGTTSSCTTSTTCCCCCCGGGSCHHHHHHHHTSSEEEEESCC
T ss_pred HCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCC
T ss_conf 82899689989593755069999999996496599847767766021410235667775759999998538989997776
Q ss_pred CCHH
Q ss_conf 1035
Q gi|254780717|r 83 MESF 86 (294)
Q Consensus 83 ~E~~ 86 (294)
+...
T Consensus 107 l~~~ 110 (161)
T d1ovma1 107 FTDT 110 (161)
T ss_dssp CCTT
T ss_pred CCCC
T ss_conf 4533
No 42
>d1txja_ b.88.1.2 (A:) Translationally controlled tumor protein TCTP (histamine-releasing factor) {Plasmodium knowlesi [TaxId: 5850]}
Probab=20.55 E-value=22 Score=13.55 Aligned_cols=37 Identities=11% Similarity=0.207 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 5567899999999742186565889989999863122
Q gi|254780717|r 136 LNVQYIAHVIAMELIKKDPRNKIIYEKNEEEFKNQLS 172 (294)
Q Consensus 136 ~n~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~L~ 172 (294)
...+.+.+.|.+.|.+..|+.-+.|+++++.+.+.+.
T Consensus 89 ~yiK~YmK~v~~~L~e~~perV~~Fk~~a~~~vK~Il 125 (171)
T d1txja_ 89 VYIKNYMQKILKYLEEKKPDRVDVFKTKAQPLIKHIL 125 (171)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999998764097789999987899999998
Done!