RPSBLAST alignment of GI: 254780717 and protein with PDBid: 3cx3
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae} Length = 284
Score = 138 bits (348), Expect = 1e-33
Identities = 51/273 (18%), Positives = 106/273 (38%), Gaps = 7/273 (2%)
Query: 24 LQVVVSIKPIHSIVSCIMQGIGTPALLVKGASSPHEYSLRISEAMMLENADIIFWLGAEM 83
+++V S PI+++V + + ++ + H + ++ + +AD+ + +
Sbjct: 11 MKIVTSFYPIYAMVKEVSGDLNDVRMIQSSSG-IHSFEPSANDIAAIYDADVFVYHSHTL 69
Query: 84 ESFLVKPLHSLNKQSNVVTLSHSPDLHRILLRDNHSHFHDSE----ADDLHLWLNPLNVQ 139
ES+ +L K V + + D D H WL+P
Sbjct: 70 ESWAGSLDPNLKKSKVKVLEASEGMTLERVPGLEDVEAGDGVDEKTLYDPHTWLDPEKAG 129
Query: 140 YIAHVIAMELIKKDPRNKIIYEKNEEEFKNQLSQLDKELHSILQPVEKKKIIVFHEAYRY 199
A +IA +L + D +K Y+KN + F + +L K+ + +K + H A+ Y
Sbjct: 130 EEAQIIADKLSEVDSEHKETYQKNAQAFIKKAQELTKKFQPKFEKATQKTFVTQHTAFSY 189
Query: 200 FASHYNLSIVTFP-MSHSVFMGAASLRNIRSKIISDKISCLFYGPEFDSKIIRSITNDTG 258
A + L+ + +S L I+ + + K+ +F SK+ ++ TG
Sbjct: 190 LAKRFGLNQLGIAGISPEQEPSPRQLTEIQEFVKTYKVKTIFTESNASSKVAETLVKSTG 249
Query: 259 VMSAILDPEGMLIAEGPELYFQLMRSMSNSIAK 291
V L+P Y + + + +A+
Sbjct: 250 VGLKTLNPLESDPQNDKT-YLENLEENMSILAE 281