RPSBLAST alignment of GI: 254780717 and protein with PDBid: 3gi1
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A Length = 286
Score = 184 bits (467), Expect = 2e-47
Identities = 55/277 (19%), Positives = 105/277 (37%), Gaps = 7/277 (2%)
Query: 21 AGSLQVVVSIKPIHSIVSCIMQGIGTPALLVKGASSPHEYSLRISEAMMLENADIIFWLG 80
+ VV S P++++ + + ++ GA H + +++ + +AD+ +
Sbjct: 10 TQGMSVVTSFYPMYAMTKEVSGDLNDVRMIQSGAG-IHSFEPSVNDVAAIYDADLFVYHS 68
Query: 81 AEMESFLVKPLHSLNKQSNVVTLSHSPDLHRILLRDNHSHFHDSEAD----DLHLWLNPL 136
+E++ +L K V + P + D H W +P+
Sbjct: 69 HTLEAWARDLDPNLKKSKVDVFEASKPLTLDRVKGLEDMEVTQGIDPATLYDPHTWTDPV 128
Query: 137 NVQYIAHVIAMELIKKDPRNKIIYEKNEEEFKNQLSQLDKELHSILQPVEKKKIIVFHEA 196
A IA EL + DP++K Y KN + FK + QL +E + V K + H A
Sbjct: 129 LAGEEAVNIAKELGRLDPKHKDSYTKNAKAFKKEAEQLTEEYTQKFKKVRSKTFVTQHTA 188
Query: 197 YRYFASHYNLSIVTFP-MSHSVFMGAASLRNIRSKIISDKISCLFYGPEFDSKIIRSITN 255
+ Y A + L + +S L+ I+ + + +F + KI +I
Sbjct: 189 FSYLAKRFGLKQLGISGISPEQEPSPRQLKEIQDFVKEYNVKTIFAEDNVNPKIAHAIAK 248
Query: 256 DTGVMSAILDPEGMLIAEGPELYFQLMRSMSNSIAKN 292
TG L P G + Y + +R+ + +
Sbjct: 249 STGAKVKTLSPLEAAP-SGNKTYLENLRANLEVLYQQ 284