RPSBLAST alignment for GI: 254780718 and conserved domain: TIGR01842

>gnl|CDD|162555 TIGR01842, type_I_sec_PrtD, type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. Length = 544
 Score =  104 bits (262), Expect = 2e-23
 Identities = 68/218 (31%), Positives = 111/218 (50%), Gaps = 32/218 (14%)

Query: 11  ISLSNTSF-HKNGYK-ILQDINFTIKPNEIVTLIGPNGSGKSTIAKLITGIIKPTIGSVK 68
           +S+ N +     G K  L+ I+F ++  E + +IGP+GSGKST+A+LI GI  PT GSV+
Sbjct: 317 LSVENVTIVPPGGKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVR 376

Query: 69  ---------------RHPQLIVGYVPQKVTI-ENTLPLSLMRFMTLSMPSSRDDVLQILD 112
                          +H    +GY+PQ V +   T+  ++ RF   + P    +  ++  
Sbjct: 377 LDGADLKQWDRETFGKH----IGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAG 432

Query: 113 RVNLIGK----YNRNIKD----LSGGEFQRALLAKALLRKPNLLVLDEPLQGIDFPGELS 164
              LI +    Y+  I      LSGG+ QR  LA+AL   P L+VLDEP   +D  GE +
Sbjct: 433 VHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQA 492

Query: 165 LYELITSVRQSTGCGILLISHNLHMVMASTDTVICLNN 202
           L   I +++   G  +++I+H    ++   D ++ L +
Sbjct: 493 LANAIKALKAR-GITVVVITHRPS-LLGCVDKILVLQD 528