RPSBLAST alignment for GI: 254780718 and conserved domain: TIGR02857

>gnl|CDD|163042 TIGR02857, CydD, thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD. Length = 529

 Score = 93.9 bits (234), Expect = 3e-20
 Identities = 62/217 (28%), Positives = 103/217 (47%), Gaps = 31/217 (14%)

Query: 9   PLISLSNTSFHKNG--YKILQDINFTIKPNEIVTLIGPNGSGKSTIAKLITGIIKPTIGS 66
           P +  S  S    G     L+ ++FT+ P E V L+GP+G+GKST+  L+ G + PT GS
Sbjct: 319 PSLEFSGLSVAYPGRRAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGS 378

Query: 67  VK-----------RHPQLIVGYVPQKVTIENTLPLSLMRFMTLSMP-SSRDDVLQILDRV 114
           +               +  + +VPQ   +      ++   + L+ P +S  ++ + L+R 
Sbjct: 379 IAVNGVPLADADADSWRDQIAWVPQHPFL---FAGTIAENIRLARPDASDAEIRRALERA 435

Query: 115 NLI-------GKYNRNIKD----LSGGEFQRALLAKALLRKPNLLVLDEPLQGIDFPGEL 163
            L           +  I +    LSGG+ QR  LA+A LR   LL+LDEP   +D   E 
Sbjct: 436 GLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLRDAPLLLLDEPTAHLDAETEA 495

Query: 164 SLYELITSVRQSTGCGILLISHNLHMVMASTDTVICL 200
            + E + ++ Q  G  +LL++H L  +    D ++ L
Sbjct: 496 LVTEALRALAQ--GRTVLLVTHRLA-LAERADRIVVL 529