RPSBLAST alignment for GI: 254780718 and conserved domain: TIGR03719
>gnl|CDD|163431 TIGR03719, ABC_ABC_ChvD, ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown. Length = 552
Score = 71.5 bits (176), Expect = 2e-13
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 40/170 (23%)
Query: 24 KILQDINFTIKPNEIVTLIGPNGSGKSTIAKLITGIIKPTIGSVKRHPQLIVGYVPQKVT 83
+IL+DI+ + P + ++G NG+GKST+ +++ G+ K G + P + VGY+PQ+
Sbjct: 19 EILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAPGIKVGYLPQEPQ 78
Query: 84 IENTLPL-------------SLMRFMTLSM----PSSRDDVL--------QILDRVNLIG 118
++ T + +L RF +S P + D L +I+D +
Sbjct: 79 LDPTKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWD 138
Query: 119 KYNR---------------NIKDLSGGEFQRALLAKALLRKPNLLVLDEP 153
+ ++ LSGGE +R L + LL KP++L+LDEP
Sbjct: 139 LDRKLEIAMDALRCPPWDADVTKLSGGERRRVALCRLLLSKPDMLLLDEP 188