RPSBLAST alignment for GI: 254780718 and conserved domain: cd03293
>gnl|CDD|73052 cd03293, ABC_NrtD_SsuB_transporters, NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 220
Score = 129 bits (325), Expect = 9e-31
Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 17/209 (8%)
Query: 11 ISLSNTSFH----KNGYKILQDINFTIKPNEIVTLIGPNGSGKSTIAKLITGIIKPTIGS 66
+ + N S L+DI+ +++ E V L+GP+G GKST+ ++I G+ +PT G
Sbjct: 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGE 60
Query: 67 VKRH------PQLIVGYVPQK------VTIENTLPLSLMRFMTLSMPSSRDDVLQILDRV 114
V P GYV Q+ +T+ + + L L + +R+ ++L+ V
Sbjct: 61 VLVDGEPVTGPGPDRGYVFQQDALLPWLTVLDNVALGL-ELQGVPKAEARERAEELLELV 119
Query: 115 NLIGKYNRNIKDLSGGEFQRALLAKALLRKPNLLVLDEPLQGIDFPGELSLYELITSVRQ 174
L G N LSGG QR LA+AL P++L+LDEP +D L E + + +
Sbjct: 120 GLSGFENAYPHQLSGGMRQRVALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWR 179
Query: 175 STGCGILLISHNLHMVMASTDTVICLNNR 203
TG +LL++H++ + D V+ L+ R
Sbjct: 180 ETGKTVLLVTHDIDEAVFLADRVVVLSAR 208