HHsearch alignment for GI: 254780719 and conserved domain: PRK10740
>PRK10740 branched-chain amino acid transporter permease subunit LivH; Reviewed.
Probab=94.78 E-value=0.23 Score=25.58 Aligned_cols=174 Identities=13% Similarity=0.243 Sum_probs=81.3
Q ss_pred CCCHHH--HHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHH--HHHHH-------CCHHHHH----
Q ss_conf 900698--999999999999987889-----999998799964358999999999--99995-------0036679----
Q gi|254780719|r 1 MYNEFF--IRALFSGIGIVLSTGPLG-----CFIIWQRIAYFGDTIAHSALLGVA--LSLIF-------QLPLTIC---- 60 (260)
Q Consensus 1 m~~~f~--~~all~~~~~~~~~~~lG-----~~vv~rr~s~~~~alsH~a~~Gia--l~~~l-------~~~~~~g---- 60 (260)
T Consensus 1 ~~~~~~~~lq~l~~Gl~~G~iyaL~AlGl~Li~G~~gv~Nf-----ahg~f~~~GaY~~~~l~~~~~~~~~~~~~~~~~~ 75 (308)
T PRK10740 1 MSEQFLYFLQQMFNGVTLGSTYALIAIGYTMVYGIIGMINF-----AHGEVYMIGSYVSFMIIAALMMMGIDTSWLLVAA 75 (308)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH-----HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf 94389999999999999999999999999999999577979-----9999999999999999999885653147999999
Q ss_pred HHHHHHHHHHHHHH----HCCCCCCHHHHHHHHHHHHHHHHHHHHHHH---CCCCH-HHHHH-----HHHHH----HHHC
Q ss_conf 99999999999863----103576504569999999999999999962---13200-13334-----43332----4422
Q gi|254780719|r 61 IFMIATLTSLVLLQ----IQKNEALSSDAILGVITHSTISLALVILSF---MKWVN-TDLTS-----FLFGD----ILAV 123 (260)
Q Consensus 61 a~~~~~l~al~i~~----l~~~~~~~~da~igi~~s~~~alg~llls~---~~~~~-~~l~~-----~LfG~----il~v 123 (260)
T Consensus 76 ~~~~a~v~~~~~g~~i~r~~~r~~~~~~~~~~li~t~gl--~~~l~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~ 153 (308)
T PRK10740 76 GFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGM--SIFLQNYVSLTEGSRDVALPSLFNGQWVVGHSENFSASI 153 (308)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH--HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEE
T ss_conf 999999999999999999999986445259999999999--999999999803977650785456754235554543332
Q ss_pred CHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHH
Q ss_conf 87670589999899999998-----42456654128889999808981067769999999999
Q gi|254780719|r 124 NTTDILLIWGIGFLNIMILF-----KIWKPLLATTVNYELAKAEGMQPEKIKLIFIMITSLMI 181 (260)
Q Consensus 124 ~~~dv~~~~~~~~~~~~~l~-----~~~r~l~~~~fD~~~A~~~Gi~v~~~~~l~~~l~al~v 181 (260)
T Consensus 154 ~~~~l~~~~v~~~~~~~l~l~l~rT~~G~a~RAv~~n~~~A~~~GIn~~rv~~~af~i~~~la 216 (308)
T PRK10740 154 TTMQAVIWIVTFLAMLALTIFIRYSRMGRACRACAEDLKMASLLGINTDRVIALTFVIGAAMA 216 (308)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 199999999999999999999972839689999966788998909889999999999999999