HHsearch alignment for GI: 254780719 and conserved domain: PRK11301

Probab=95.01  E-value=0.2  Score=25.93  Aligned_cols=80  Identities=18%  Similarity=0.291  Sum_probs=47.1

Q ss_pred             HHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf             2456654128889999808981067769999999999999999889999999-999999999741998999999999999
Q gi|254780719|r  145 IWKPLLATTVNYELAKAEGMQPEKIKLIFIMITSLMISVSIKFIGITLITSL-LILPTVTARRFSTSPENMAILATIIGI  223 (260)
Q Consensus       145 ~~r~l~~~~fD~~~A~~~Gi~v~~~~~l~~~l~al~v~~~v~~vG~llv~al-lv~Paa~A~~l~~~~~~~~~~s~~~g~  223 (260)
T Consensus       286 ~GRal~AIRedE~AA~alGInv~r~KL~AFalsA~~A----GlAGaLyA~~~g~IsP~~----F~~~~S~~iL~mVVlGG  357 (416)
T PRK11301        286 LGRAWEALREDEIACRSLGLNPTRIKLSAFTIGAAFA----GFAGTFFAARQGFVSPES----FTFIESAFILAIVVLGG  357 (416)
T ss_pred             HHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHH----HHHHHHHHHHCCEECCCC----CCHHHHHHHHHHHEECC
T ss_conf             8589999962799999859776999999999999999----999999998816348330----65999999797513327


Q ss_pred             HHHHHHHHH
Q ss_conf             999999999
Q gi|254780719|r  224 LGIIIGLYG  232 (260)
Q Consensus       224 ~~~~~G~~l  232 (260)
T Consensus       358 ~Gs~~G~il  366 (416)
T PRK11301        358 MGSQLGVIL  366 (416)
T ss_pred             CCCCHHHHH
T ss_conf             645199999