HHsearch results for GI: 254780719 and protein with PDBid: 2nq2_A
>2nq2_A Hypothetical ABC transporter permease protein HI1471; putative iron chelatin ABC transporter, nucleotide binding domain; 2.40A {Haemophilus influenzae}
Probab=99.91 E-value=6.2e-22 Score=136.72 Aligned_cols=249 Identities=14% Similarity=0.176 Sum_probs=180.0
Q ss_pred HHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHCCHH---HHHHHHHHHHHHHHHHHHC-CCCCC
Q ss_conf 999999999987889999----998799964358999999999999950036---6799999999999986310-35765
Q gi|254780719|r 10 LFSGIGIVLSTGPLGCFI----IWQRIAYFGDTIAHSALLGVALSLIFQLPL---TICIFMIATLTSLVLLQIQ-KNEAL 81 (260)
Q Consensus 10 ll~~~~~~~~~~~lG~~v----v~rr~s~~~~alsH~a~~Gial~~~l~~~~---~~ga~~~~~l~al~i~~l~-~~~~~ 81 (260)
.+++++.+...+.-|... -.+=.+----+++..+-.|++++++++.+. ......++.........+. ++++.
T Consensus 66 ~l~a~l~Ga~LavaG~llQ~~~rNpLA~P~iLGissGA~lg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (337)
T 2nq2_A 66 ILTALCVGAGLALSGVVLQGIFRNPLVNPHIIGVTSGSAFGGTLAIFFGFSLYGLFTSTILFGFGTLALVFLFSFKFNQR 145 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCTTCCTTTTSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHTC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999999999999998657999990665489999999999999840022578999999999999999999964778
Q ss_pred H--HHHHHHHHHHHHHHHHHHHHHH-CCC--CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
Q ss_conf 0--4569999999999999999962-132--0013334433324422876705899998999999984245665412888
Q gi|254780719|r 82 S--SDAILGVITHSTISLALVILSF-MKW--VNTDLTSFLFGDILAVNTTDILLIWGIGFLNIMILFKIWKPLLATTVNY 156 (260)
Q Consensus 82 ~--~da~igi~~s~~~alg~llls~-~~~--~~~~l~~~LfG~il~v~~~dv~~~~~~~~~~~~~l~~~~r~l~~~~fD~ 156 (260)
+ +-..+|+..+..++....+..+ ..+ ...+...|++||....+|+|++.......+.....+...|++.....||
T Consensus 146 ~~~~liL~gi~~~~~~~a~~~~~~~l~~~~~~~~~~~~W~~Gs~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~~l~lG~ 225 (337)
T 2nq2_A 146 SLLMLILIGMILSGLFSALVSLLQYISDTEEKLPSIVFWLMGSFATSNWEKLLFFFVPFLLCSSILLSLSWRLNLLSLDE 225 (337)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHSSCTTTHHHHHHHHTTCCSTTCCHHHHHHHHHHHHHHHHHHHHTTTGGGGGGSCH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCHHCCCH
T ss_conf 72177876799999999999999997224889999999850143568843213311211478888888630056210793
Q ss_pred HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH-
Q ss_conf 9999808981067769999999999999999889999999999999999741998999999999999999999999999-
Q gi|254780719|r 157 ELAKAEGMQPEKIKLIFIMITSLMISVSIKFIGITLITSLLILPTVTARRFSTSPENMAILATIIGILGIIIGLYGSLI- 235 (260)
Q Consensus 157 ~~A~~~Gi~v~~~~~l~~~l~al~v~~~v~~vG~llv~allv~Paa~A~~l~~~~~~~~~~s~~~g~~~~~~G~~lS~~- 235 (260)
|.|++.|+|+++.+...+.+.++.++.++..+|.+.+.+ ++.|+.+.+...+++|+.++.|.+.|..-......++..
T Consensus 226 ~~A~sLGv~v~~~r~~~l~l~~llta~~vs~~G~I~FvG-Li~Phiar~l~g~~~~~~l~~s~l~Ga~lll~aD~i~r~l 304 (337)
T 2nq2_A 226 KEAKALGVKMAPLRWLVIFLSGSLVACQVAISGSIGWVG-LIIPHLSRMLVGANHQSLLPCTMLVGATYMLLVDNVARSL 304 (337)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSST-THHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHH-HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 889878997999999999999999999996377630387-4099999998188853399999999999999999998665
Q ss_pred --HCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf --5588089999999999999987239
Q gi|254780719|r 236 --FDTPSGPSIIITSLFLFILSFFYKK 260 (260)
Q Consensus 236 --~~lp~g~~Iv~~~~~~f~~~~~~~k 260 (260)
+++|.|..+.++.+..|+ .+++||
T Consensus 305 ~p~elPvG~vtaliG~p~fl-~ll~r~ 330 (337)
T 2nq2_A 305 SDAEIPISILTALIGAPLFG-VLVYKL 330 (337)
T ss_dssp CSSCCCHHHHHHHHHHHHHH-HHHHCC
T ss_pred CCCCEEHHHHHHHHHHHHHH-HHHHHH
T ss_conf 67773199999999999999-999985