HHsearch alignment for GI: 254780720 and conserved domain: cd01055
>cd01055 Nonheme_Ferritin nonheme-containing ferritins. Nonheme Ferritin domain, found in archaea and bacteria, is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins. The ferritin protein shell is composed of 24 protein subunits arranged in 432 symmetry. Each protein subunit, a four-helix bundle with a fifth short terminal helix, contains a dinuclear ferroxidase center (H type). Unique to this group of proteins is a third metal site in the ferroxidase center. Iron storage involves the uptake of iron (II) at the protein shell, its oxidation by molecular oxygen at the ferroxidase centers, and the movement of iron (III) into the cavity for deposition as ferrihydrite.
Probab=100.00 E-value=0 Score=317.57 Aligned_cols=156 Identities=42% Similarity=0.664 Sum_probs=154.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCC
Q ss_conf 98999999999999999999999999998159947899999999999999999999999953997143782257204889
Q gi|254780720|r 2 TNTRDRVLNELMNMEYVAQYHYMQAAAWAASHNLDGCCNFLLKHAMEEHSHVIRIFKHLTDLGVEAKFSSIEAPVISAND 81 (164)
Q Consensus 2 s~~~~~~Ln~qi~~El~as~~Yl~~a~~~~~~~~~g~a~~f~~~a~EE~~HA~~l~~yi~~rgg~~~~~~i~~p~~~~~~ 81 (164)
T Consensus 1 s~~~~~~LN~qin~El~as~~Yl~ma~~~~~~~l~g~a~ff~~~a~EEr~HA~kl~~yl~~rgg~~~l~~I~~p~~~~~~ 80 (156)
T cd01055 1 SEKLEKALNEQINLELYSSYLYLAMAAWFDSKGLDGFANFFRVQAQEEREHAMKFFDYLNDRGGRVELPAIEAPPSEFES 80 (156)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCC
T ss_conf 97999999999999999999999999997266876899999999999999999999999976997230896898767599
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf 8999999999999999999999999997099889999999999999999999999999995288751699999999
Q gi|254780720|r 82 VEGLFSLMYEHENKVTIAYDDAIETILAEKDHQTFQFLQWFVKEQHEEMALFRRILDKIRLIGSGPHSRYMFDLEI 157 (164)
Q Consensus 82 ~~e~~~~al~~E~~vt~~~~~l~~~A~~~~D~~t~~fl~~fl~EQ~eee~~~~~ll~~l~~~g~~~~glyl~D~~l 157 (164)
T Consensus 81 ~~~~~~~al~~E~~vt~~i~~l~~~A~~~~D~~t~~FL~~fl~EQveee~~~~~~l~~l~~~g~~~~gl~~~D~~l 156 (156)
T cd01055 81 LLEVFEAALEHEQKVTESINNLVDLALEEKDYATFNFLQWFVKEQVEEEALARDILDKLKLAGDDGGGLYMLDKEL 156 (156)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHCCCC
T ss_conf 9999999999999999999999999988588718999999999999999999999999997179977100106759