HHsearch results for GI: 254780720 and protein with PDBid: 1nfv_A
>1nfv_A Bacterioferritin; 24 subunits in the active molecule, DIIRON centre, HAEM Fe-coproporphyrin III cofactor; HET: FEC; 1.95A {Desulfovibrio desulfuricans} SCOP: a.25.1.1 PDB: 1nf6_A* 1nf4_A*
Probab=99.96 E-value=3.4e-28 Score=189.72 Aligned_cols=144 Identities=17% Similarity=0.219 Sum_probs=137.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCC
Q ss_conf 98999999999999999999999999998159947899999999999999999999999953997143782257204889
Q gi|254780720|r 2 TNTRDRVLNELMNMEYVAQYHYMQAAAWAASHNLDGCCNFLLKHAMEEHSHVIRIFKHLTDLGVEAKFSSIEAPVISAND 81 (164)
Q Consensus 2 s~~~~~~Ln~qi~~El~as~~Yl~~a~~~~~~~~~g~a~~f~~~a~EE~~HA~~l~~yi~~rgg~~~~~~i~~p~~~~~~ 81 (164)
++++.++||++++.|+.|+++|+.+|.+|+++++++++++|+.+|.||+.||.++++||..+||.|.++....| ..+++
T Consensus 9 ~~kli~~Ln~~l~~E~~a~~~Y~~~a~~~~~~~~~~la~~f~~~a~eE~~Ha~~lae~i~~lGg~p~~~~~~~~-~~~~~ 87 (179)
T 1nfv_A 9 KAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKV-VTGQA 87 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSSCC-CCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCC-CCCCC
T ss_conf 89999999999999999999999999987157758999999999999999999999999975999765602026-67799
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 89999999999999999999999999970998899999999999999999999999999952887
Q gi|254780720|r 82 VEGLFSLMYEHENKVTIAYDDAIETILAEKDHQTFQFLQWFVKEQHEEMALFRRILDKIRLIGSG 146 (164)
Q Consensus 82 ~~e~~~~al~~E~~vt~~~~~l~~~A~~~~D~~t~~fl~~fl~EQ~eee~~~~~ll~~l~~~g~~ 146 (164)
+.++++.+++.|+.++..|.++++.|.+.+|+.|.+||+||+.++.+++.++.++++.++++|.+
T Consensus 88 ~~e~l~~~l~~E~~~~~~y~~~~~~a~~~~D~~t~~~l~~il~dEe~H~~~~e~~l~~i~~~g~~ 152 (179)
T 1nfv_A 88 VPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIKNLGDT 152 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999998872989999999999999999999999999999998799