HHsearch results for GI: 254780720 and protein with PDBid: 1nfv_A

>1nfv_A Bacterioferritin; 24 subunits in the active molecule, DIIRON centre, HAEM Fe-coproporphyrin III cofactor; HET: FEC; 1.95A {Desulfovibrio desulfuricans} SCOP: a.25.1.1 PDB: 1nf6_A* 1nf4_A*
Probab=99.96  E-value=3.4e-28  Score=189.72  Aligned_cols=144  Identities=17%  Similarity=0.219  Sum_probs=137.0

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCC
Q ss_conf             98999999999999999999999999998159947899999999999999999999999953997143782257204889
Q gi|254780720|r    2 TNTRDRVLNELMNMEYVAQYHYMQAAAWAASHNLDGCCNFLLKHAMEEHSHVIRIFKHLTDLGVEAKFSSIEAPVISAND   81 (164)
Q Consensus         2 s~~~~~~Ln~qi~~El~as~~Yl~~a~~~~~~~~~g~a~~f~~~a~EE~~HA~~l~~yi~~rgg~~~~~~i~~p~~~~~~   81 (164)
                      ++++.++||++++.|+.|+++|+.+|.+|+++++++++++|+.+|.||+.||.++++||..+||.|.++....| ..+++
T Consensus         9 ~~kli~~Ln~~l~~E~~a~~~Y~~~a~~~~~~~~~~la~~f~~~a~eE~~Ha~~lae~i~~lGg~p~~~~~~~~-~~~~~   87 (179)
T 1nfv_A            9 KAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKV-VTGQA   87 (179)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSSCC-CCSCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCC-CCCCC
T ss_conf             89999999999999999999999999987157758999999999999999999999999975999765602026-67799


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             89999999999999999999999999970998899999999999999999999999999952887
Q gi|254780720|r   82 VEGLFSLMYEHENKVTIAYDDAIETILAEKDHQTFQFLQWFVKEQHEEMALFRRILDKIRLIGSG  146 (164)
Q Consensus        82 ~~e~~~~al~~E~~vt~~~~~l~~~A~~~~D~~t~~fl~~fl~EQ~eee~~~~~ll~~l~~~g~~  146 (164)
                      +.++++.+++.|+.++..|.++++.|.+.+|+.|.+||+||+.++.+++.++.++++.++++|.+
T Consensus        88 ~~e~l~~~l~~E~~~~~~y~~~~~~a~~~~D~~t~~~l~~il~dEe~H~~~~e~~l~~i~~~g~~  152 (179)
T 1nfv_A           88 VPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIKNLGDT  152 (179)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999999999998872989999999999999999999999999999998799