HHsearch results for GI: 254780720 and protein with PDBid: 1vlg_A
>1vlg_A Ferritin; TM1128, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; 2.00A {Thermotoga maritima MSB8} SCOP: a.25.1.1 PDB: 1z4a_A*
Probab=100.00 E-value=0 Score=309.18 Aligned_cols=160 Identities=27% Similarity=0.448 Sum_probs=157.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCC
Q ss_conf 99899999999999999999999999999815994789999999999999999999999995399714378225720488
Q gi|254780720|r 1 MTNTRDRVLNELMNMEYVAQYHYMQAAAWAASHNLDGCCNFLLKHAMEEHSHVIRIFKHLTDLGVEAKFSSIEAPVISAN 80 (164)
Q Consensus 1 ~s~~~~~~Ln~qi~~El~as~~Yl~~a~~~~~~~~~g~a~~f~~~a~EE~~HA~~l~~yi~~rgg~~~~~~i~~p~~~~~ 80 (164)
||++|+++||+|||.||+||++|++||+||+++++|||++||+.+|+||++||++|++|+++|||+|++++|++|+.+|+
T Consensus 16 ~s~~v~~~LN~qi~~El~As~~Yl~ma~~~~~~~l~g~a~ff~~~a~EE~~HA~~l~~yl~~rgg~~~~~~i~~p~~~~~ 95 (176)
T 1vlg_A 16 ISEKVRKALNDQLNREIYSSYLYLSMATYFDAEGFKGFAHWMKKQAQEELTHAMKFYEYIYERGGRVELEAIEKPPSNWN 95 (176)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCCCS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 56999999999999999999999999999815685889999999999999789999999997699860688889987779
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf 98999999999999999999999999997099889999999999999999999999999995288751699999999965
Q gi|254780720|r 81 DVEGLFSLMYEHENKVTIAYDDAIETILAEKDHQTFQFLQWFVKEQHEEMALFRRILDKIRLIGSGPHSRYMFDLEIEKI 160 (164)
Q Consensus 81 ~~~e~~~~al~~E~~vt~~~~~l~~~A~~~~D~~t~~fl~~fl~EQ~eee~~~~~ll~~l~~~g~~~~glyl~D~~l~~~ 160 (164)
++.++|+.++++|+.|++.+++++++|.+.+|++|.+||+||++||+++++++++++++++++|++|.|+|+||++|++.
T Consensus 96 ~~~e~~~~al~~E~~v~~~l~~l~~~A~~~~D~~t~~fL~~fl~eQ~e~~~~l~~~l~~l~~~g~~g~~ly~~D~~l~~~ 175 (176)
T 1vlg_A 96 GIKDAFEAALKHEEFVTQSIYNILELASEEKDHATVSFLKWFVDEQVEEEDQVREILDLLEKANGQMSVIFQLDRYLGQR 175 (176)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
T ss_conf 88999999999999999999999999988198608999999999999999999999999997389732799999997578