HHsearch results for GI: 254780720 and protein with PDBid: 1zs3_A
>1zs3_A Lactococcus lactis Mg1363 DPSA; oxidative stress, DNA binding, lactic acid bacteria, DNA binding protein; 2.70A {Lactococcus lactis} SCOP: a.25.1.1
Probab=98.51 E-value=2.4e-05 Score=50.90 Aligned_cols=116 Identities=13% Similarity=0.038 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEC--------CCCC--CC
Q ss_conf 9999999999999999999999981599478999999999999999999999999539971437--------8225--72
Q gi|254780720|r 7 RVLNELMNMEYVAQYHYMQAAAWAASHNLDGCCNFLLKHAMEEHSHVIRIFKHLTDLGVEAKFS--------SIEA--PV 76 (164)
Q Consensus 7 ~~Ln~qi~~El~as~~Yl~~a~~~~~~~~~g~a~~f~~~a~EE~~HA~~l~~yi~~rgg~~~~~--------~i~~--p~ 76 (164)
.+||..+.. +..-|.=+.-+.|. -.| |.+-.+|.....+..++...+.+||..+||.|.-+ .++. +.
T Consensus 29 a~ln~lLAn-l~vl~~k~~~~HWn-V~G-~~lH~~fee~y~~~~e~~D~iAERi~~lG~~p~~t~~e~~e~s~i~e~~~~ 105 (182)
T 1zs3_A 29 AMLGHVLSN-LFIENIRLTQAGIY-AKS-PVKCEYLREIAQREVEYFFKISDLLLDENEIVPSTTEEFLKYHKFITEDPK 105 (182)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHHHH-CSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCCCCGG
T ss_pred HHHHHHHHH-HHHHHHHHHHCCEE-CCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHCCC
T ss_conf 999489998-99999999830100-247-499999999999999999999999998799999779999987778142078
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf 0488989999999999999999999999999970998899999999999
Q gi|254780720|r 77 ISANDVEGLFSLMYEHENKVTIAYDDAIETILAEKDHQTFQFLQWFVKE 125 (164)
Q Consensus 77 ~~~~~~~e~~~~al~~E~~vt~~~~~l~~~A~~~~D~~t~~fl~~fl~E 125 (164)
....+..++++..++.-..+...+++++++|.+++|+.|.++|..++.+
T Consensus 106 ~~~~~~~~mv~~L~~d~~~l~~~~~~~i~~A~~~~D~~tadll~~~~~~ 154 (182)
T 1zs3_A 106 AKYWTDEDLLESFIVDFQAQNMFITRAIKLANKEEKFALAAGVVELYGY 154 (182)
T ss_dssp GGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 8888999999999999999999999999999877878899999999999