HHsearch results for GI: 254780720 and protein with PDBid: 1zuj_A
>1zuj_A Hypothetical protein llacc01001955; oxidative stress, DPS, DNA binding, lactic acid bacteria, DNA binding protein; 2.90A {Lactococcus lactis} SCOP: a.25.1.1
Probab=98.51 E-value=2.3e-05 Score=50.99 Aligned_cols=121 Identities=11% Similarity=0.002 Sum_probs=90.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEC--------CCC--CC
Q ss_conf 99999999999999999999999981599478999999999999999999999999539971437--------822--57
Q gi|254780720|r 6 DRVLNELMNMEYVAQYHYMQAAAWAASHNLDGCCNFLLKHAMEEHSHVIRIFKHLTDLGVEAKFS--------SIE--AP 75 (164)
Q Consensus 6 ~~~Ln~qi~~El~as~~Yl~~a~~~~~~~~~g~a~~f~~~a~EE~~HA~~l~~yi~~rgg~~~~~--------~i~--~p 75 (164)
...||..+.. +..-+.=+.-+.| .-.| |+|-.+|.....+..++...+.++|..+|+.|..+ .++ .|
T Consensus 27 ~a~lnhvLAn-l~vl~~Kl~~~HW-nV~G-~~FH~~fee~y~~~~e~~D~iAEri~~lG~~p~~t~~e~~~~s~i~ee~~ 103 (179)
T 1zuj_A 27 GAMLSHVLSN-IFYEKISLMQAGL-YAKS-ANYRIKFREIALKEDEWFYLISEQLLDENELVPTTLDEFVSNHKFIENDP 103 (179)
T ss_dssp HHHHHHHHHH-HHHHHHHHHHHHH-HCSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCCCCT
T ss_pred HHHHHHHHHH-HHHHHHHHHCCEE-EEEC-CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCC
T ss_conf 9998379999-9999999981505-3567-26999999999999999999999999879999845999998756855577
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Q ss_conf 204889899999999999999999999999999709988999999999999999
Q gi|254780720|r 76 VISANDVEGLFSLMYEHENKVTIAYDDAIETILAEKDHQTFQFLQWFVKEQHEE 129 (164)
Q Consensus 76 ~~~~~~~~e~~~~al~~E~~vt~~~~~l~~~A~~~~D~~t~~fl~~fl~EQ~ee 129 (164)
...+.++.+++...++.-..+...+++.+++|.+++|++|.++|..++.+.-+.
T Consensus 104 ~~~~~~~~eml~~l~~d~~~~~~~~~~ai~lAeee~d~~t~dll~~~l~~~ek~ 157 (179)
T 1zuj_A 104 KAKYWTDEALIENFINDFQNQNLFIGRAIKLAQKEEKFSLELAIRKLYGYNLSI 157 (179)
T ss_dssp TGGGSCHHHHHHHHHHHHHHHHHHHHHHTHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf 778889999999999999999999999999998878988999999999999999