HHsearch results for GI: 254780720 and protein with PDBid: 2itb_A
>2itb_A TRNA-(MS(2)IO(6)A)-hydroxylase, putative; putative ATTH, structural genomics, joint center for structu genomics, JCSG; 2.05A {Pseudomonas putida KT2440} SCOP: a.25.1.7
Probab=91.93 E-value=0.58 Score=24.23 Aligned_cols=132 Identities=15% Similarity=0.119 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCC------
Q ss_conf 99999999999999999999999999815994789999999999999999999999995399714378225720------
Q gi|254780720|r 4 TRDRVLNELMNMEYVAQYHYMQAAAWAASHNLDGCCNFLLKHAMEEHSHVIRIFKHLTDLGVEAKFSSIEAPVI------ 77 (164)
Q Consensus 4 ~~~~~Ln~qi~~El~as~~Yl~~a~~~~~~~~~g~a~~f~~~a~EE~~HA~~l~~yi~~rgg~~~~~~i~~p~~------ 77 (164)
+....|.+|-+-|..|+..=+++-..+ -+.+.+..-+-.-|.||+.|..++.+-|..||....- +.+.+.
T Consensus 27 ~~~~~L~DHA~cEkKAA~tA~sli~rY--p~~~~Lv~~m~~LarEEL~HF~qV~~im~~Rgi~l~~--~~~~~Ya~~L~~ 102 (206)
T 2itb_A 27 DQETLLIDHKNCEFKAASTALSLIAKY--NTHLDLINMMSRLAREELVHHEQVLRLMKRRGVPLRP--VSAGRYASGLRR 102 (206)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHT--TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCC--CCCCSHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC--CCCCHHHHHHHH
T ss_conf 989999999999999999999999988--9918999999999999999999999999985996888--898889999998
Q ss_pred -----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf -----488989999999999999999999999999970998899999999999999999999999999952887
Q gi|254780720|r 78 -----SANDVEGLFSLMYEHENKVTIAYDDAIETILAEKDHQTFQFLQWFVKEQHEEMALFRRILDKIRLIGSG 146 (164)
Q Consensus 78 -----~~~~~~e~~~~al~~E~~vt~~~~~l~~~A~~~~D~~t~~fl~~fl~EQ~eee~~~~~ll~~l~~~g~~ 146 (164)
...-+.+.+-.+-=.|-.- -.+..-+|... |.....|-..+++ .|.+++.+-++..+.+++.
T Consensus 103 ~~r~~~~~~llD~Llv~a~IEARs---cERF~lLa~~l-d~eL~~FY~~L~~---SEarH~~~yl~LA~~~~~~ 169 (206)
T 2itb_A 103 LVRAHEPVKLVDTLVVGAFIEARS---CERFAALVPHL-DEELGRFYHGLLK---SEARHYQGYLKLAHNYGDE 169 (206)
T ss_dssp TSCSSTTHHHHHHHHHHHHHHHHH---HHHHHHHGGGS-CHHHHHHHHHHHH---HHHHHHHHHHHHHHHHSCH
T ss_pred HCCCCCHHHHHHHHHHHHHHHHHH---HHHHHHHHHHC-CHHHHHHHHHHHH---HHHHHHHHHHHHHHHHCCH
T ss_conf 704788189999999999997556---77999998747-6999999999999---9999999999999997887