HHsearch results for GI: 254780720 and protein with PDBid: 2qqy_A
>2qqy_A Sigma B operon; dodecameric alpha-helical, ferritin fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Bacillus anthracis str}
Probab=99.95 E-value=8.6e-27 Score=181.21 Aligned_cols=141 Identities=18% Similarity=0.176 Sum_probs=133.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCH
Q ss_conf 89999999999999999999999999981599478999999999999999999999999539971437822572048898
Q gi|254780720|r 3 NTRDRVLNELMNMEYVAQYHYMQAAAWAASHNLDGCCNFLLKHAMEEHSHVIRIFKHLTDLGVEAKFSSIEAPVISANDV 82 (164)
Q Consensus 3 ~~~~~~Ln~qi~~El~as~~Yl~~a~~~~~~~~~g~a~~f~~~a~EE~~HA~~l~~yi~~rgg~~~~~~i~~p~~~~~~~ 82 (164)
+++.++||++++.|++|+++|+++|.||++.++++++++|+.+|.||+.||.++++||..+||.|..++ .|...+.++
T Consensus 9 ~~li~~Ln~~l~~E~~a~~~Y~~~a~~~~~~~~~~~~~~f~~~a~eE~~Ha~~l~~~i~~lGg~p~~~~--~~~~~~~~~ 86 (149)
T 2qqy_A 9 KELIEGLNEDLAGEYSAIIMYNHNAATVSGIYRQVLKPFFESEISDEQGHALYLAEKIKTLGGTPTTIP--LRVKQAEDV 86 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCC--CCCCCCSSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--CCHHHHHHH
T ss_conf 999999999999999999999999998807988999999999999999999999999987499877675--310112568
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 999999999999999999999999997099889999999999999999999999999995288
Q gi|254780720|r 83 EGLFSLMYEHENKVTIAYDDAIETILAEKDHQTFQFLQWFVKEQHEEMALFRRILDKIRLIGS 145 (164)
Q Consensus 83 ~e~~~~al~~E~~vt~~~~~l~~~A~~~~D~~t~~fl~~fl~EQ~eee~~~~~ll~~l~~~g~ 145 (164)
.++|+.+++.|+.+++.|+++++.|.+.+|+.|.++++|++.++.++...++++|++.+++.+
T Consensus 87 ~e~L~~al~~E~~~~~~y~~~~~~a~~~~D~~~~~~l~~~~~eE~~H~~~l~~~L~~~~~~~~ 149 (149)
T 2qqy_A 87 REMLEYARQSEYETIKRYEKRKEQAANLNMTELVVKLEDMIADETNHMEELDRLLNDKAMVLN 149 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 999999999999999999999999988698999999999999999999999998563232369